mRNA_P-wetherbeei_contig15318.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15318.1.1
Unique NamemRNA_P-wetherbeei_contig15318.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig15318.1.1 vs. uniprot
Match: A0A1F2ZTG6_9PROT (Queuine tRNA-ribosyltransferase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1F2ZTG6_9PROT)

HSP 1 Score: 701 bits (1810), Expect = 1.920e-254
Identity = 342/374 (91.44%), Postives = 355/374 (94.92%), Query Frame = 1 
Query:    1 MSLSFELLGSDGLARRGRIATAHGTVETPAFMPVGTAGTVKAMLPQSVAETGAEIVLGNTFHLMLRPGAERVAALGGLHRFMNWPGPILTDSGGFQVMSLKELRKLDADGVTFRSPVDGTQHRLTPERSIEIQRLLDADITMSFDECTTWPVEEAAAASSMRLSMKWAERGKKAFTERPGYGLFGIVQGSIFPALREESVKALTAIGFDGYAIGGLAVGEGQELMFATLDRTVPMLPRDRPRYLMGVGRPADIVGAVARGIDMFDCVMPTRAGRTAQAFTRRGELNLRNARHRDDPRPIDERCACPACKHHSRAYLHHLIRAEEILASMLLTWHNLHYYQDIMRGLRGAIESNSLGHWIAAFQGEQDLGDIPPL 1122
            MSLSFELLG+D LARRGRI TAHGTVETPAFMPVGTAGTVKAMLPQSVAETGA+IVLGNTFHLMLRPGAERVAALGGLH+FMNWPGPILTDSGGFQVMSLKELRKLDADGVTFRSP+DG++HRLTPERSIEIQ+LLDADITMSFDECTTWPVEE  AA SMRLSM WA RGK+AF+ERPGYGLFGIVQGS+FPALR ESVKAL AIGFDGYAIGGLAVGEGQE+MF TLD TVP+LP DRPRYLMGVGRPADIVGAV RGIDMFDCVMPTR GRTAQAFTRRGELNLRNARHRDDPRPIDERCACPAC HHSRAYLHHLIR+EEILASMLLTWHNLHYYQDIMRGLRGAIE NSLGHWIAAF  EQD GDIPPL
Sbjct:    1 MSLSFELLGNDDLARRGRITTAHGTVETPAFMPVGTAGTVKAMLPQSVAETGAQIVLGNTFHLMLRPGAERVAALGGLHKFMNWPGPILTDSGGFQVMSLKELRKLDADGVTFRSPLDGSEHRLTPERSIEIQQLLDADITMSFDECTTWPVEEGEAAKSMRLSMTWAGRGKRAFSERPGYGLFGIVQGSVFPALRAESVKALAAIGFDGYAIGGLAVGEGQEMMFKTLDATVPLLPADRPRYLMGVGRPADIVGAVRRGIDMFDCVMPTRGGRTAQAFTRRGELNLRNARHRDDPRPIDERCACPACTHHSRAYLHHLIRSEEILASMLLTWHNLHYYQDIMRGLRGAIEDNSLGHWIAAFASEQDRGDIPPL 374
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BLAST of mRNA_P-wetherbeei_contig15318.1.1 vs. uniprot
Match: A0A1T4S7A9_9HYPH (Queuine tRNA-ribosyltransferase n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4S7A9_9HYPH)

HSP 1 Score: 671 bits (1731), Expect = 2.090e-242
Identity = 326/374 (87.17%), Postives = 344/374 (91.98%), Query Frame = 1 
Query:    1 MSLSFELLGSDGLARRGRIATAHGTVETPAFMPVGTAGTVKAMLPQSVAETGAEIVLGNTFHLMLRPGAERVAALGGLHRFMNWPGPILTDSGGFQVMSLKELRKLDADGVTFRSPVDGTQHRLTPERSIEIQRLLDADITMSFDECTTWPVEEAAAASSMRLSMKWAERGKKAFTERPGYGLFGIVQGSIFPALREESVKALTAIGFDGYAIGGLAVGEGQELMFATLDRTVPMLPRDRPRYLMGVGRPADIVGAVARGIDMFDCVMPTRAGRTAQAFTRRGELNLRNARHRDDPRPIDERCACPACKHHSRAYLHHLIRAEEILASMLLTWHNLHYYQDIMRGLRGAIESNSLGHWIAAFQGEQDLGDIPPL 1122
            MSLSFELL +DGLARRGRIATAHGTVETPAFMPVGTAGTVKAM+PQSVAETGAEIVLGNT+HLMLRPGAERVAALGGLH+FMNWP  ILTDSGGFQVMSLKELRK+D DGVTFRSP+DG QHRLTPERSI+IQ LLDADITMSFDECT WPVE+  AA SMRLSM WA RGK AF +RPGYGLFGIVQGS FP LREES KALTAIGFDGYA+GGLAVGEGQELMF TL+ TVP+LP DRPRYLMGVGRP+DIVGAV RGIDMFDCVMPTRAGRTAQAFTRRGELNLRNARHRDDPRPIDERC CPAC+HHSRAYLHHLIR+EEIL  MLLTWHNLHYYQDIMRGLR AIE+ S GHWIAAF+ EQ  GD+PPL
Sbjct:    1 MSLSFELLATDGLARRGRIATAHGTVETPAFMPVGTAGTVKAMMPQSVAETGAEIVLGNTYHLMLRPGAERVAALGGLHKFMNWPRAILTDSGGFQVMSLKELRKIDRDGVTFRSPIDGIQHRLTPERSIQIQHLLDADITMSFDECTPWPVEKEDAARSMRLSMDWAGRGKHAFVDRPGYGLFGIVQGSTFPDLREESAKALTAIGFDGYAVGGLAVGEGQELMFQTLETTVPLLPADRPRYLMGVGRPSDIVGAVRRGIDMFDCVMPTRAGRTAQAFTRRGELNLRNARHRDDPRPIDERCGCPACRHHSRAYLHHLIRSEEILGPMLLTWHNLHYYQDIMRGLRAAIETQSFGHWIAAFEQEQGRGDLPPL 374
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BLAST of mRNA_P-wetherbeei_contig15318.1.1 vs. uniprot
Match: A0A259MDJ9_9PROT (Queuine tRNA-ribosyltransferase n=7 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259MDJ9_9PROT)

HSP 1 Score: 670 bits (1728), Expect = 6.000e-242
Identity = 326/374 (87.17%), Postives = 343/374 (91.71%), Query Frame = 1 
Query:    1 MSLSFELLGSDGLARRGRIATAHGTVETPAFMPVGTAGTVKAMLPQSVAETGAEIVLGNTFHLMLRPGAERVAALGGLHRFMNWPGPILTDSGGFQVMSLKELRKLDADGVTFRSPVDGTQHRLTPERSIEIQRLLDADITMSFDECTTWPVEEAAAASSMRLSMKWAERGKKAFTERPGYGLFGIVQGSIFPALREESVKALTAIGFDGYAIGGLAVGEGQELMFATLDRTVPMLPRDRPRYLMGVGRPADIVGAVARGIDMFDCVMPTRAGRTAQAFTRRGELNLRNARHRDDPRPIDERCACPACKHHSRAYLHHLIRAEEILASMLLTWHNLHYYQDIMRGLRGAIESNSLGHWIAAFQGEQDLGDIPPL 1122
            MSLS+E LGSDG ARRGRI TAHGT+ETPAFMPVGTAGTVKAMLPQSVAETGAEIVLGNTFHLMLRPGAERVAALGGLH+FMNWPGPILTDSGGFQVMSLKELRKLD DGVTFRSP DG+QHRLTPE SI IQRLLDADITMSFDECT+WP EE  AA SMRLSMKWAERG++AF ER GYGLFGIVQGS FP LR ES KAL  IGFDGYA+GGLAVGEGQELMF TLD TVPMLP DRPRYLMGVGRP DIVGAV RGIDMFDCVMPTRAGRTAQAFTRRGELN+RNARHRDDPRPIDE+C CPACKHHSRAYLHHLIRA+EIL +MLLTWHNLHYYQD+MRGLRGAIES +L  WIA+F+ +Q LGDIPPL
Sbjct:    1 MSLSYEQLGSDGAARRGRITTAHGTIETPAFMPVGTAGTVKAMLPQSVAETGAEIVLGNTFHLMLRPGAERVAALGGLHKFMNWPGPILTDSGGFQVMSLKELRKLDPDGVTFRSPKDGSQHRLTPESSIGIQRLLDADITMSFDECTSWPAEEPEAAFSMRLSMKWAERGRRAFVERSGYGLFGIVQGSTFPELRAESAKALIDIGFDGYAVGGLAVGEGQELMFGTLDYTVPMLPADRPRYLMGVGRPGDIVGAVKRGIDMFDCVMPTRAGRTAQAFTRRGELNMRNARHRDDPRPIDEQCGCPACKHHSRAYLHHLIRADEILGAMLLTWHNLHYYQDVMRGLRGAIESKTLDSWIASFERDQALGDIPPL 374
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BLAST of mRNA_P-wetherbeei_contig15318.1.1 vs. uniprot
Match: A0A537N8X6_9PROT (Queuine tRNA-ribosyltransferase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537N8X6_9PROT)

HSP 1 Score: 662 bits (1708), Expect = 7.760e-239
Identity = 324/373 (86.86%), Postives = 343/373 (91.96%), Query Frame = 1 
Query:    1 MSLSFELLGSDGLARRGRIATAHGTVETPAFMPVGTAGTVKAMLPQSVAETGAEIVLGNTFHLMLRPGAERVAALGGLHRFMNWPGPILTDSGGFQVMSLKELRKLDADGVTFRSPVDGTQHRLTPERSIEIQRLLDADITMSFDECTTWPVEEAAAASSMRLSMKWAERGKKAFTERPGYGLFGIVQGSIFPALREESVKALTAIGFDGYAIGGLAVGEGQELMFATLDRTVPMLPRDRPRYLMGVGRPADIVGAVARGIDMFDCVMPTRAGRTAQAFTRRGELNLRNARHRDDPRPIDERCACPACKHHSRAYLHHLIRAEEILASMLLTWHNLHYYQDIMRGLRGAIESNSLGHWIAAFQGEQDLGDIPP 1119
            MSL F+LLG+DGLARRGR+ TAHGTVETPAFMPVGTAGTVKAMLPQSVAETGAEIVLGNTFHLMLRPGAERVAALGGLH+FMNWP PILTDSGGFQVMSL ELRKLDADGVTFRSP DG+QHRLTPERSIEIQ LLDADITMSFDECTTWPVEE AAA SMRLSMKWAERG++AF +R GYGLFGIVQGS++PALR ES ++LT IGFDGYAIGGLAVGEGQE+MF TLD TVP LP DRPRYLMGVGRPADIVGAV RGIDMFDCV+PTR GRTAQAF RRGELNLRNARHRDDPRPIDE+CACPAC +HSRAYLHHLIR+EEIL +MLLTWHNL YYQDIMRGLRGAIES SL  WIA F+ EQ LGDI P
Sbjct:    1 MSLGFDLLGTDGLARRGRLTTAHGTVETPAFMPVGTAGTVKAMLPQSVAETGAEIVLGNTFHLMLRPGAERVAALGGLHKFMNWPHPILTDSGGFQVMSLAELRKLDADGVTFRSPSDGSQHRLTPERSIEIQHLLDADITMSFDECTTWPVEEEAAAQSMRLSMKWAERGRRAFRDRRGYGLFGIVQGSVYPALRAESAQSLTDIGFDGYAIGGLAVGEGQEMMFTTLDTTVPQLPSDRPRYLMGVGRPADIVGAVRRGIDMFDCVLPTRGGRTAQAFARRGELNLRNARHRDDPRPIDEQCACPACLNHSRAYLHHLIRSEEILGAMLLTWHNLQYYQDIMRGLRGAIESRSLELWIAGFEAEQALGDIAP 373
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BLAST of mRNA_P-wetherbeei_contig15318.1.1 vs. uniprot
Match: A0A1H8NUI4_9PROT (Queuine tRNA-ribosyltransferase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8NUI4_9PROT)

HSP 1 Score: 651 bits (1679), Expect = 1.750e-234
Identity = 319/374 (85.29%), Postives = 339/374 (90.64%), Query Frame = 1 
Query:    1 MSLSFELLGSDGLARRGRIATAHGTVETPAFMPVGTAGTVKAMLPQSVAETGAEIVLGNTFHLMLRPGAERVAALGGLHRFMNWPGPILTDSGGFQVMSLKELRKLDADGVTFRSPVDGTQHRLTPERSIEIQRLLDADITMSFDECTTWPVEEAAAASSMRLSMKWAERGKKAFTERPGYGLFGIVQGSIFPALREESVKALTAIGFDGYAIGGLAVGEGQELMFATLDRTVPMLPRDRPRYLMGVGRPADIVGAVARGIDMFDCVMPTRAGRTAQAFTRRGELNLRNARHRDDPRPIDERCACPACKHHSRAYLHHLIRAEEILASMLLTWHNLHYYQDIMRGLRGAIESNSLGHWIAAFQGEQDLGDIPPL 1122
            MSLSFELLG+DG ARRGRI TAHGTVETPAFMP+GT GTVKAMLPQSVAETGAEIVLGNTFHLMLRPGAERVAA GGLH+FMNWP PILTDSGGFQVMSLK+LRKLD DGVTFRSP DG++HRLTP RSIEIQ LLD +ITMSFDECT WPV E AAA SMRLSMKWAERG++AF +RPGYGLFGIVQGS++P LR ESVKALTAIGFDGYA+GGLAVGEGQ+ MF  LD T PMLP +RPRYLMGVGRPADIVGAV RGIDMFDCV+PTR GRTAQAFTRRGELNLRNARHRDD RPIDE+CACPAC+HHSRAYL HLIRAEEILA+MLLTWHNL YYQDIMRGLR AIES SL  WIAAF+ EQ  GDIPPL
Sbjct:    1 MSLSFELLGTDGAARRGRIGTAHGTVETPAFMPLGTGGTVKAMLPQSVAETGAEIVLGNTFHLMLRPGAERVAAQGGLHKFMNWPRPILTDSGGFQVMSLKDLRKLDPDGVTFRSPFDGSEHRLTPGRSIEIQHLLDTNITMSFDECTGWPVAEDAAAFSMRLSMKWAERGRRAFVDRPGYGLFGIVQGSVYPDLRAESVKALTAIGFDGYAVGGLAVGEGQQAMFGVLDVTTPMLPAERPRYLMGVGRPADIVGAVKRGIDMFDCVLPTRGGRTAQAFTRRGELNLRNARHRDDHRPIDEQCACPACRHHSRAYLQHLIRAEEILAAMLLTWHNLQYYQDIMRGLRDAIESGSLDSWIAAFEEEQGRGDIPPL 374
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BLAST of mRNA_P-wetherbeei_contig15318.1.1 vs. uniprot
Match: A0A5C5SW62_9HYPH (Queuine tRNA-ribosyltransferase n=1 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5SW62_9HYPH)

HSP 1 Score: 581 bits (1498), Expect = 6.410e-207
Identity = 287/374 (76.74%), Postives = 313/374 (83.69%), Query Frame = 1 
Query:    1 MSLSFELLGSDGLARRGRIATAHGTVETPAFMPVGTAGTVKAMLPQSVAETGAEIVLGNTFHLMLRPGAERVAALGGLHRFMNWPGPILTDSGGFQVMSLKELRKLDADGVTFRSPVDGTQHRLTPERSIEIQRLLDADITMSFDECTTWPVEEAAAASSMRLSMKWAERGKKAFTERPGYGLFGIVQGSIFPALREESVKALTAIGFDGYAIGGLAVGEGQELMFATLDRTVPMLPRDRPRYLMGVGRPADIVGAVARGIDMFDCVMPTRAGRTAQAFTRRGELNLRNARHRDDPRPIDERCACPACKHHSRAYLHHLIRAEEILASMLLTWHNLHYYQDIMRGLRGAIESNSLGHWIAAFQGEQDLGDIPPL 1122
            M+  F LL SDG ARRGR+ TAHGTVETPAFMPVGTA TVKAMLPQSVA TGAEIVLGNT+HLMLRPGAERV  LGGLH FMNWP PILTDSGGFQVMSL +LR++DADGV F+S +DG++ RLTPE SI IQR LDADITMSFDECT +P  +  AA+SMRLSM+WAERGK+AF  R GYGLFGIVQGS +  LR ES + LT IGFDGYAIGGLAVGEGQ  MF TLD TVP LP DRPRYLMGVGRPADIVGAV RGIDMFDCVMPTRAGRTAQAFT RGELNLRNARHRDDPRP+ + CACPAC  HSRAYLHHLI+++EIL +MLLTWHNLH+YQD+MRGLRGAIE   +  W   F  EQ  GDI  L
Sbjct:    1 MTTEFSLLTSDGSARRGRLKTAHGTVETPAFMPVGTAATVKAMLPQSVAATGAEIVLGNTYHLMLRPGAERVERLGGLHAFMNWPAPILTDSGGFQVMSLSKLRQIDADGVDFQSHIDGSRQRLTPESSIAIQRQLDADITMSFDECTPFPATQPQAATSMRLSMRWAERGKRAFVPRSGYGLFGIVQGSTYEDLRLESARTLTNIGFDGYAIGGLAVGEGQPAMFRTLDITVPALPDDRPRYLMGVGRPADIVGAVQRGIDMFDCVMPTRAGRTAQAFTWRGELNLRNARHRDDPRPLSDGCACPACTGHSRAYLHHLIKSDEILGAMLLTWHNLHFYQDVMRGLRGAIEKGGMADWTGWFHEEQAKGDIAAL 374
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BLAST of mRNA_P-wetherbeei_contig15318.1.1 vs. uniprot
Match: A0A5C8PGP9_9HYPH (Queuine tRNA-ribosyltransferase n=1 Tax=Vineibacter terrae TaxID=2586908 RepID=A0A5C8PGP9_9HYPH)

HSP 1 Score: 575 bits (1483), Expect = 1.650e-204
Identity = 284/374 (75.94%), Postives = 316/374 (84.49%), Query Frame = 1 
Query:    1 MSLSFELLGSDGLARRGRIATAHGTVETPAFMPVGTAGTVKAMLPQSVAETGAEIVLGNTFHLMLRPGAERVAALGGLHRFMNWPGPILTDSGGFQVMSLKELRKLDADGVTFRSPVDGTQHRLTPERSIEIQRLLDADITMSFDECTTWPVEEAAAASSMRLSMKWAERGKKAFTERPGYGLFGIVQGSIFPALREESVKALTAIGFDGYAIGGLAVGEGQELMFATLDRTVPMLPRDRPRYLMGVGRPADIVGAVARGIDMFDCVMPTRAGRTAQAFTRRGELNLRNARHRDDPRPIDERCACPACKHHSRAYLHHLIRAEEILASMLLTWHNLHYYQDIMRGLRGAIESNSLGHWIAAFQGEQDLGDIPPL 1122
            M+L+F LL +   ARRGR+ TAHGTVETPAFMPVGTA TVKAMLP SVA TGA+IVLGNT+HLMLRPGAER+  LGGLHRFMNWPGPILTDSGGFQVMSL +LR++DA GV F+S +DG++ RLTP  SIEIQR L ADITMSFDECT +P   A AA+SMRLSM+WAERG++AFT RPG+GLFGIVQGS++  LR ES + LT IGFDGYAIGGLAVGEGQE MF TLD TVP LP DRPRYLMGVGRPADIVGAV RGIDMFDCVMPTRAGRTAQAFT RGELNLRNARHRDDPRP+ E CACPAC  HSRAYLHHLI+++EIL +MLLTWHNL +YQD+MRGLR AIE+ +L  W A F  E   GDI  L
Sbjct:    1 MTLAFSLLANTHAARRGRLVTAHGTVETPAFMPVGTAATVKAMLPASVAATGAQIVLGNTYHLMLRPGAERIERLGGLHRFMNWPGPILTDSGGFQVMSLSKLRQIDAGGVDFQSHIDGSRQRLTPAISIEIQRQLGADITMSFDECTPFPATHAQAATSMRLSMRWAERGRQAFTARPGHGLFGIVQGSVYEDLRLESARTLTEIGFDGYAIGGLAVGEGQEAMFRTLDVTVPALPADRPRYLMGVGRPADIVGAVQRGIDMFDCVMPTRAGRTAQAFTWRGELNLRNARHRDDPRPLMEGCACPACTSHSRAYLHHLIKSDEILGAMLLTWHNLQFYQDVMRGLRTAIEAGTLADWAAWFHEEHAKGDIAAL 374
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BLAST of mRNA_P-wetherbeei_contig15318.1.1 vs. uniprot
Match: A0A6J4F378_9PROT (Queuine tRNA-ribosyltransferase n=2 Tax=Magnetospirillum sp. UT-4 TaxID=2681467 RepID=A0A6J4F378_9PROT)

HSP 1 Score: 572 bits (1475), Expect = 2.530e-203
Identity = 276/373 (73.99%), Postives = 314/373 (84.18%), Query Frame = 1 
Query:    4 SLSFELLGSDGLARRGRIATAHGTVETPAFMPVGTAGTVKAMLPQSVAETGAEIVLGNTFHLMLRPGAERVAALGGLHRFMNWPGPILTDSGGFQVMSLKELRKLDADGVTFRSPVDGTQHRLTPERSIEIQRLLDADITMSFDECTTWPVEEAAAASSMRLSMKWAERGKKAFTERPGYGLFGIVQGSIFPALREESVKALTAIGFDGYAIGGLAVGEGQELMFATLDRTVPMLPRDRPRYLMGVGRPADIVGAVARGIDMFDCVMPTRAGRTAQAFTRRGELNLRNARHRDDPRPIDERCACPACKHHSRAYLHHLIRAEEILASMLLTWHNLHYYQDIMRGLRGAIESNSLGHWIAAFQGEQDLGDIPPL 1122
            + SF+LL +DG AR GRI TAHG V+TPAFMPVGTAGTVKAMLP SVA TGA++VLGNT+HLMLRPGAERVA LGGLHRFM+W GPILTDSGGFQVMSL +LRKL  +GV F+S +DG++H LTPERS+EIQRLLDAD+TM+FDECT +P     A  SMRLSM+WA R K+AF ERPGYGLFGIVQG I+P LR ES  ALTA+GFDGYA+GGLAVGEGQELMFATL+ T P+LP D+PRYLMGVG+P+D+VGAV RGIDMFDCVMPTR+GRTAQAFTRRG +NLRNARH+DDPRP+DE C CPAC+ HSRAYLHHLIR+EEIL  MLLTWHN+ YYQDIMRGLR AI       + AA    +  GDI PL
Sbjct:    8 AFSFDLLATDGAARLGRIHTAHGAVDTPAFMPVGTAGTVKAMLPASVAATGAQMVLGNTYHLMLRPGAERVARLGGLHRFMDWSGPILTDSGGFQVMSLAKLRKLTEEGVAFQSHIDGSKHLLTPERSMEIQRLLDADVTMAFDECTPFPATPDQAGQSMRLSMRWAARSKEAFVERPGYGLFGIVQGGIYPDLRAESAAALTAMGFDGYAVGGLAVGEGQELMFATLETTTPLLPADKPRYLMGVGKPSDMVGAVLRGIDMFDCVMPTRSGRTAQAFTRRGTVNLRNARHQDDPRPLDEECGCPACRRHSRAYLHHLIRSEEILGPMLLTWHNIQYYQDIMRGLRAAIAEGRAAAFAAAMLAAEAAGDIEPL 380
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BLAST of mRNA_P-wetherbeei_contig15318.1.1 vs. uniprot
Match: M3A7D4_9PROT (Queuine tRNA-ribosyltransferase n=5 Tax=Magnetospirillum TaxID=13134 RepID=M3A7D4_9PROT)

HSP 1 Score: 565 bits (1457), Expect = 1.160e-200
Identity = 270/370 (72.97%), Postives = 311/370 (84.05%), Query Frame = 1 
Query:   10 SFELLGSDGLARRGRIATAHGTVETPAFMPVGTAGTVKAMLPQSVAETGAEIVLGNTFHLMLRPGAERVAALGGLHRFMNWPGPILTDSGGFQVMSLKELRKLDADGVTFRSPVDGTQHRLTPERSIEIQRLLDADITMSFDECTTWPVEEAAAASSMRLSMKWAERGKKAFTERPGYGLFGIVQGSIFPALREESVKALTAIGFDGYAIGGLAVGEGQELMFATLDRTVPMLPRDRPRYLMGVGRPADIVGAVARGIDMFDCVMPTRAGRTAQAFTRRGELNLRNARHRDDPRPIDERCACPACKHHSRAYLHHLIRAEEILASMLLTWHNLHYYQDIMRGLRGAIESNSLGHWIAAFQGEQDLGDIPP 1119
            SFELL +DG ARRGR+ TAHG ++TPAFMPVGTAGTVKAM+P SVA TGA+IVLGNT+HLMLRPGAERVA LGGLH+FMNWPGPILTDSGGFQVMSL +LRK+DADGVTF+S  DG++HRLTPE S+EIQRLLDADITM+FDECT +P     A  SMRLSM+WA R K+AF  R GYGLFGIVQG ++P LR ES KAL  IGF+GYA+GGLAVGEGQ+ MF+TLD T P+LP D+PRYLMGVGRP+DI+GAV RGIDMFDCVMPTR+GRTAQAFTRRG +NLRNARH+DDPRP++E C CPAC+ HSRAYLHHLIR+EEIL  MLLTWHN+  YQ +M GLR AI       + A     +++GDIPP
Sbjct:    5 SFELLATDGAARRGRVHTAHGAIDTPAFMPVGTAGTVKAMMPASVAATGAQIVLGNTYHLMLRPGAERVARLGGLHKFMNWPGPILTDSGGFQVMSLAKLRKMDADGVTFQSHHDGSKHRLTPESSMEIQRLLDADITMAFDECTPFPATHGQAEESMRLSMRWARRSKEAFVARDGYGLFGIVQGGVYPDLRAESAKALLEIGFEGYAVGGLAVGEGQDAMFSTLDVTTPLLPGDKPRYLMGVGRPSDIIGAVGRGIDMFDCVMPTRSGRTAQAFTRRGTVNLRNARHQDDPRPLEEDCPCPACRDHSRAYLHHLIRSEEILGPMLLTWHNIQAYQTLMAGLRSAIAEGRFTRFAAEAAALEEMGDIPP 374
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BLAST of mRNA_P-wetherbeei_contig15318.1.1 vs. uniprot
Match: A0A178MMW7_9PROT (Queuine tRNA-ribosyltransferase n=2 Tax=Magnetospirillum TaxID=13134 RepID=A0A178MMW7_9PROT)

HSP 1 Score: 564 bits (1453), Expect = 4.710e-200
Identity = 267/367 (72.75%), Postives = 313/367 (85.29%), Query Frame = 1 
Query:   13 FELLGSDGLARRGRIATAHGTVETPAFMPVGTAGTVKAMLPQSVAETGAEIVLGNTFHLMLRPGAERVAALGGLHRFMNWPGPILTDSGGFQVMSLKELRKLDADGVTFRSPVDGTQHRLTPERSIEIQRLLDADITMSFDECTTWPVEEAAAASSMRLSMKWAERGKKAFTERPGYGLFGIVQGSIFPALREESVKALTAIGFDGYAIGGLAVGEGQELMFATLDRTVPMLPRDRPRYLMGVGRPADIVGAVARGIDMFDCVMPTRAGRTAQAFTRRGELNLRNARHRDDPRPIDERCACPACKHHSRAYLHHLIRAEEILASMLLTWHNLHYYQDIMRGLRGAIESNSLGHWIAAFQGEQDLGDI 1113
            F+L  +DG AR G + TAHG ++TPAFMPVGTA TVKAM+P+SVA TGA+++LGNT+HLMLRPGAER+  LGGLHRFMNWPGPILTDSGGFQVMSL +LRKL  DGVTF+S +DG++H LTPERS+EIQ LLDAD+TM+FDECT +P  E  AA SMRLSM+WA+R K AF ERPGYGLFGIVQG I+P  R ES  ALTA+GFDGYAIGGLAVGEGQELMF+TL+ T P+LP DRPRYLMGVGRP+DIVGAV RG+DMFDCVMPTR+GRTAQAFTRRG +NLRNARH+DDPRP+D+ C CPAC+++SRAYLHHLIRAEEIL  MLLTWHNLHYYQ++M GLR AI+   +  +   F  ++ +GDI
Sbjct:    6 FDLHATDGAARCGTLHTAHGPMDTPAFMPVGTAATVKAMMPESVAATGAQMILGNTYHLMLRPGAERIGKLGGLHRFMNWPGPILTDSGGFQVMSLAKLRKLTEDGVTFQSHIDGSKHLLTPERSMEIQNLLDADVTMAFDECTPFPATEKQAAESMRLSMRWAKRSKDAFVERPGYGLFGIVQGGIYPEFRAESAAALTAMGFDGYAIGGLAVGEGQELMFSTLEVTTPLLPTDRPRYLMGVGRPSDIVGAVLRGVDMFDCVMPTRSGRTAQAFTRRGTVNLRNARHQDDPRPLDQDCTCPACRNYSRAYLHHLIRAEEILGPMLLTWHNLHYYQEVMAGLRSAIKDGRVQEFAKNFAEQEAMGDI 372
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15318.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F2ZTG6_9PROT1.920e-25491.44Queuine tRNA-ribosyltransferase n=3 Tax=Alphaprote... [more]
A0A1T4S7A9_9HYPH2.090e-24287.17Queuine tRNA-ribosyltransferase n=1 Tax=Enhydrobac... [more]
A0A259MDJ9_9PROT6.000e-24287.17Queuine tRNA-ribosyltransferase n=7 Tax=Alphaprote... [more]
A0A537N8X6_9PROT7.760e-23986.86Queuine tRNA-ribosyltransferase n=1 Tax=Alphaprote... [more]
A0A1H8NUI4_9PROT1.750e-23485.29Queuine tRNA-ribosyltransferase n=3 Tax=Alphaprote... [more]
A0A5C5SW62_9HYPH6.410e-20776.74Queuine tRNA-ribosyltransferase n=1 Tax=Reyranella... [more]
A0A5C8PGP9_9HYPH1.650e-20475.94Queuine tRNA-ribosyltransferase n=1 Tax=Vineibacte... [more]
A0A6J4F378_9PROT2.530e-20373.99Queuine tRNA-ribosyltransferase n=2 Tax=Magnetospi... [more]
M3A7D4_9PROT1.160e-20072.97Queuine tRNA-ribosyltransferase n=5 Tax=Magnetospi... [more]
A0A178MMW7_9PROT4.710e-20072.75Queuine tRNA-ribosyltransferase n=2 Tax=Magnetospi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15318contigP-wetherbeei_contig15318:75..1199 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1205680.CAKO01000002_gene2599
Preferred nametgt
PFAMsTGT
Model size1125
Max annot lvl204441|Rhodospirillales
KEGG rclassRC00063
KEGG koko:K00773
KEGG ReactionR03789,R10209
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.17e-250
EggNOG OGsCOG0343@1|root,COG0343@2|Bacteria,1MUCA@1224|Proteobacteria,2TR87@28211|Alphaproteobacteria,2JPNV@204441|Rhodospirillales
EC2.4.2.29
DescriptionCatalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
Cds size1125
COG categoryJ
BRITEko00000,ko01000,ko03016
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186052.2041261-CDS-P-wetherbeei_contig15318:74..11991683186052.2041261-CDS-P-wetherbeei_contig15318:74..1199Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15318 75..1199 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15318.1.1prot_P-wetherbeei_contig15318.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15318 75..1199 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15318.1.1

>prot_P-wetherbeei_contig15318.1.1 ID=prot_P-wetherbeei_contig15318.1.1|Name=mRNA_P-wetherbeei_contig15318.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=375bp
MSLSFELLGSDGLARRGRIATAHGTVETPAFMPVGTAGTVKAMLPQSVAE
TGAEIVLGNTFHLMLRPGAERVAALGGLHRFMNWPGPILTDSGGFQVMSL
KELRKLDADGVTFRSPVDGTQHRLTPERSIEIQRLLDADITMSFDECTTW
PVEEAAAASSMRLSMKWAERGKKAFTERPGYGLFGIVQGSIFPALREESV
KALTAIGFDGYAIGGLAVGEGQELMFATLDRTVPMLPRDRPRYLMGVGRP
ADIVGAVARGIDMFDCVMPTRAGRTAQAFTRRGELNLRNARHRDDPRPID
ERCACPACKHHSRAYLHHLIRAEEILASMLLTWHNLHYYQDIMRGLRGAI
ESNSLGHWIAAFQGEQDLGDIPPL*
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mRNA from alignment at P-wetherbeei_contig15318:75..1199+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15318.1.1 ID=mRNA_P-wetherbeei_contig15318.1.1|Name=mRNA_P-wetherbeei_contig15318.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1125bp|location=Sequence derived from alignment at P-wetherbeei_contig15318:75..1199+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGTCTTTCCTTCGAGCTTTTGGGCAGTGACGGCCTGGCGCGGCGCGG
CCGTATCGCCACGGCGCACGGCACCGTCGAGACGCCGGCCTTCATGCCGG
TCGGCACCGCGGGCACGGTGAAGGCGATGCTGCCGCAGTCCGTCGCCGAA
ACCGGCGCCGAGATCGTGCTGGGCAACACCTTCCACCTGATGCTGCGGCC
GGGGGCGGAGCGCGTGGCGGCATTGGGCGGGCTGCACAGGTTCATGAACT
GGCCGGGGCCTATTCTGACCGATTCGGGCGGCTTCCAGGTGATGTCGCTG
AAGGAGCTGCGCAAGCTCGACGCCGACGGCGTCACCTTTCGTTCGCCGGT
CGACGGCACGCAGCACCGGCTCACGCCCGAGCGCTCGATCGAGATCCAGC
GCCTGCTGGACGCCGATATCACCATGTCGTTCGACGAATGCACGACCTGG
CCCGTCGAAGAGGCCGCCGCCGCTTCCTCCATGCGGCTCTCGATGAAGTG
GGCCGAGCGCGGCAAGAAGGCTTTCACCGAACGACCGGGCTACGGGCTGT
TCGGCATCGTGCAGGGCAGCATCTTTCCGGCGTTGCGCGAGGAGAGTGTA
AAAGCCCTCACGGCGATCGGCTTCGACGGCTACGCCATCGGCGGTCTCGC
CGTGGGCGAAGGCCAGGAGCTGATGTTCGCCACCCTCGATCGCACCGTGC
CGATGCTGCCCCGGGACCGGCCACGCTATCTGATGGGCGTTGGCCGGCCG
GCCGACATCGTGGGTGCCGTCGCCCGCGGCATCGACATGTTCGACTGCGT
GATGCCGACGCGGGCCGGCCGCACAGCGCAGGCTTTTACCCGCCGCGGCG
AACTCAACCTGCGCAATGCCCGCCATCGCGACGATCCCAGGCCGATCGAC
GAGCGCTGCGCCTGCCCGGCCTGCAAACATCACTCCCGCGCCTATCTGCA
TCACCTGATCCGGGCCGAGGAGATCCTCGCCTCGATGCTGCTCACGTGGC
ACAACCTGCATTACTACCAGGACATCATGCGCGGCCTGCGCGGCGCCATC
GAAAGCAACTCACTCGGCCACTGGATCGCCGCATTCCAGGGCGAACAAGA
CTTGGGCGACATCCCACCCCTTTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15318:75..1199+

>mRNA_P-wetherbeei_contig15318.1.1 ID=mRNA_P-wetherbeei_contig15318.1.1|Name=mRNA_P-wetherbeei_contig15318.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1125bp|location=Sequence derived from alignment at P-wetherbeei_contig15318:75..1199+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGTCTTTCCTTCGAGCTTTTGGGCAGTGACGGCCTGGCGCGGCGCGG
CCGTATCGCCACGGCGCACGGCACCGTCGAGACGCCGGCCTTCATGCCGG
TCGGCACCGCGGGCACGGTGAAGGCGATGCTGCCGCAGTCCGTCGCCGAA
ACCGGCGCCGAGATCGTGCTGGGCAACACCTTCCACCTGATGCTGCGGCC
GGGGGCGGAGCGCGTGGCGGCATTGGGCGGGCTGCACAGGTTCATGAACT
GGCCGGGGCCTATTCTGACCGATTCGGGCGGCTTCCAGGTGATGTCGCTG
AAGGAGCTGCGCAAGCTCGACGCCGACGGCGTCACCTTTCGTTCGCCGGT
CGACGGCACGCAGCACCGGCTCACGCCCGAGCGCTCGATCGAGATCCAGC
GCCTGCTGGACGCCGATATCACCATGTCGTTCGACGAATGCACGACCTGG
CCCGTCGAAGAGGCCGCCGCCGCTTCCTCCATGCGGCTCTCGATGAAGTG
GGCCGAGCGCGGCAAGAAGGCTTTCACCGAACGACCGGGCTACGGGCTGT
TCGGCATCGTGCAGGGCAGCATCTTTCCGGCGTTGCGCGAGGAGAGTGTA
AAAGCCCTCACGGCGATCGGCTTCGACGGCTACGCCATCGGCGGTCTCGC
CGTGGGCGAAGGCCAGGAGCTGATGTTCGCCACCCTCGATCGCACCGTGC
CGATGCTGCCCCGGGACCGGCCACGCTATCTGATGGGCGTTGGCCGGCCG
GCCGACATCGTGGGTGCCGTCGCCCGCGGCATCGACATGTTCGACTGCGT
GATGCCGACGCGGGCCGGCCGCACAGCGCAGGCTTTTACCCGCCGCGGCG
AACTCAACCTGCGCAATGCCCGCCATCGCGACGATCCCAGGCCGATCGAC
GAGCGCTGCGCCTGCCCGGCCTGCAAACATCACTCCCGCGCCTATCTGCA
TCACCTGATCCGGGCCGAGGAGATCCTCGCCTCGATGCTGCTCACGTGGC
ACAACCTGCATTACTACCAGGACATCATGCGCGGCCTGCGCGGCGCCATC
GAAAGCAACTCACTCGGCCACTGGATCGCCGCATTCCAGGGCGAACAAGA
CTTGGGCGACATCCCACCCCTTTGA
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