mRNA_P-wetherbeei_contig1530.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1530.1.1
Unique NamemRNA_P-wetherbeei_contig1530.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1530.1.1 vs. uniprot
Match: A0A836CND4_9STRA (Ferritin-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CND4_9STRA)

HSP 1 Score: 297 bits (760), Expect = 5.980e-94
Identity = 158/248 (63.71%), Postives = 190/248 (76.61%), Query Frame = 2
Query:  323 DKAILNFALNLECLEAEFYSWAAYGHGLSETLLGGGPKSVGGMKATLNETIQYYAEEIADNEIHHVALLRGILGDDAIACPQMDIGPAFAAAADAAIGATLCPPFSPYRNGNSFLLGAFIFEDVGVTAYHGAAPLILDADVLSYAAGILGVEAYHAGAVRSLLSKKADRQLHPYTDVTVGPVADAISALRASAGGGKDAGITGSGDKYVLVPVDENAVVFSRSTEEVLAIVYLGSADAPGGFFPEGLN 1066
            D  I  FALNLECLEAEFYS+AA+G+GLS+ L G GP+ +GGMKA L+  +Q YAEE+A NEI HV +LR  LGD A ACPQ+DIGPAFAAAA+AA+G TL PP+SPY N   FLLG+FIFEDVGVTAY+GAAPL+ +  ++  AA IL VEAYH G +R+LL ++ D+QL PYT VTVG    AISALRA  GGGKD G+T  G    L P D+NA+ ++R  EEVLAIVYLGS+D PGGFFP G+N
Sbjct:    2 DIMIAKFALNLECLEAEFYSYAAFGYGLSDELRGYGPEPIGGMKAALSPDVQAYAEEVARNEIAHVGVLRAALGDAAPACPQIDIGPAFAAAANAAVGTTLSPPYSPYYNDAWFLLGSFIFEDVGVTAYNGAAPLLTNKAIVGTAASILAVEAYHGGEIRTLLYQQEDQQLTPYT-VTVGDAVTAISALRAKVGGGKDQGLTTDG-MLSLTPADDNALAYAREAEEVLAIVYLGSSDKPGGFFPCGIN 247          
BLAST of mRNA_P-wetherbeei_contig1530.1.1 vs. uniprot
Match: A0A836CQA2_9STRA (Ferritin-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQA2_9STRA)

HSP 1 Score: 285 bits (730), Expect = 2.030e-89
Identity = 156/251 (62.15%), Postives = 189/251 (75.30%), Query Frame = 2
Query:  323 DKAILNFALNLECLEAEFYSWAAYGHGLSETLLGGGPKSVGGMKATLNE--TIQYYAEEIADNEIHHVALLRGILGDDAIACPQMDIGPAFAAAADAAIGATLCPPFSPYRNGNSFLLGAFIFEDVGVTAYHGAAPLILDADVLSYAAGILGVEAYHAGAVRSLLSKKADRQLHPYTDVTVGPVADAISALRASAGGGKDAGIT-GSGDKYVLVPVDENAVVFSRSTEEVLAIVYLGSADAPGGFFPEGLN 1066
            D AI+ FALNLECLEA+FYS+AA+GHGLS+   G GP+ +GG KA L    T Q YAEEIA+NEI HVA LR +LGD A  CP +DIGPAFAAAA+AA G  L PPFSPYR+   F++GAF+FEDVGVTAY+G APLI + DVL  A GIL +EAYH G+VR+LL ++ D  L PY   TV     +ISALRA+ GGGKDA +T G G    + P D NA+ F+R+T+EVLAIVYLGSADAPGGFFP+G++
Sbjct:    1 DVAIVKFALNLECLEAQFYSYAAFGHGLSDEQRGHGPEPIGGRKANLTPVATAQAYAEEIANNEIAHVAALRTVLGDQAPPCPLIDIGPAFAAAANAAAGTELVPPFSPYRSDALFVVGAFLFEDVGVTAYNGMAPLIENKDVLGAATGILAIEAYHGGSVRTLLYQQGDVTLAPYA-FTVADAVASISALRAALGGGKDAALTTGDGGAPSVFPADANALAFARTTQEVLAIVYLGSADAPGGFFPDGVS 250          
BLAST of mRNA_P-wetherbeei_contig1530.1.1 vs. uniprot
Match: A0A835ZGC8_9STRA (Ferritin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGC8_9STRA)

HSP 1 Score: 286 bits (731), Expect = 4.620e-89
Identity = 155/248 (62.50%), Postives = 187/248 (75.40%), Query Frame = 2
Query:  323 DKAILNFALNLECLEAEFYSWAAYGHGLSETLLGGGPKSVGGMKATLNETIQYYAEEIADNEIHHVALLRGILGDDAIACPQMDIGPAFAAAADAAIGATLCPPFSPYRNGNSFLLGAFIFEDVGVTAYHGAAPLILDADVLSYAAGILGVEAYHAGAVRSLLSKKADRQLHPYTDVTVGPVADAISALRASAGGGKDAGITGSGDKYVLVPVDENAVVFSRSTEEVLAIVYLGSADAPGGFFPEGLN 1066
            D  ILNFALNLECLEAEFYS+AA+G  L++   GGGP S+GG +A L++  Q YAEEIA++EI HV LLRG+LGD A+ CP MDIGPAFAAAA+AA+G  L P ++PY N   F LGAFIFEDVGVTAY+GAAPLI + D L+ AAG+LGVEAYHAG VR+LL +  D  L PY  VTV     A+S LR   GG KD  I   G+ + LVPVDEN++VF+R+ +EVLAIVYLG A  PGGFFP+G+N
Sbjct:   37 DTDILNFALNLECLEAEFYSYAAFGAPLTDEQRGGGPASIGGKQAVLSDDFQTYAEEIANHEIGHVELLRGVLGDAAVPCPLMDIGPAFAAAANAAVGMKLAPAYTPYFNDPWFALGAFIFEDVGVTAYNGAAPLIKNKDYLAAAAGLLGVEAYHAGIVRTLLYQVKDTPLTPYP-VTVAAATTAVSNLRGMVGGDKDVPIYDGGETH-LVPVDENSLVFARTVDEVLAIVYLGDAKKPGGFFPDGIN 282          
BLAST of mRNA_P-wetherbeei_contig1530.1.1 vs. uniprot
Match: A0A836CMD7_9STRA (Ferritin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMD7_9STRA)

HSP 1 Score: 283 bits (724), Expect = 2.090e-88
Identity = 157/260 (60.38%), Postives = 192/260 (73.85%), Query Frame = 2
Query:  287 PASVEATRSVAQDKAILNFALNLECLEAEFYSWAAYGHGLSETLLGGGPKSVGGMKATLNETIQYYAEEIADNEIHHVALLRGILGDDAIACPQMDIGPAFAAAADAAIGATLCPPFSPYRNGNSFLLGAFIFEDVGVTAYHGAAPLILDADVLSYAAGILGVEAYHAGAVRSLLSKKADRQLHPYTDVTVGPVADAISALRASAGGGKDAGITGSGDKYVLVPVDENAVVFSRSTEEVLAIVYLGSADAPGGFFPEGLN 1066
            PA V  T +   D  I  FALNLECLEAEFYS+AA+G+GLS+ L G GP+ +GGMKA L+  +Q YAEEIA+NEI HVA+LR  LGD A ACPQ+DIGPAFAAAA+AA+G TL P +SPY +   FL GAFIFEDVGVTAY+GAA L+ +  VL  AA IL VEAYH G++R+LL ++ D  L PY   TVG    AISALRA+ GGGKD  +  +G    ++P DENA+ ++R   EVLAIVYLGSA+ PGGFFP+G+N
Sbjct:    3 PADVPPTDT---DITIAKFALNLECLEAEFYSYAAFGYGLSDELRGYGPEPIGGMKAALSPAVQTYAEEIANNEIAHVAVLRAALGDAAPACPQIDIGPAFAAAANAAVGTTLSPAYSPYFSDLWFLTGAFIFEDVGVTAYNGAATLLTNKSVLGAAASILAVEAYHGGSIRTLLYQQEDIVLTPYA-FTVGQAITAISALRAAVGGGKDVALETNG-VVSIIPTDENALAYARMATEVLAIVYLGSANVPGGFFPDGIN 257          
BLAST of mRNA_P-wetherbeei_contig1530.1.1 vs. uniprot
Match: A0A835YUW9_9STRA (Ferritin-like domain-containing protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUW9_9STRA)

HSP 1 Score: 269 bits (687), Expect = 3.860e-82
Identity = 145/240 (60.42%), Postives = 178/240 (74.17%), Query Frame = 2
Query:  347 LNLECLEAEFYSWAAYGHGLSETLLGGGPKSVGGMKATLNETIQYYAEEIADNEIHHVALLRGILGDDAIACPQMDIGPAFAAAADAAIGATLCPPFSPYRNGNSFLLGAFIFEDVGVTAYHGAAPLILDADVLSYAAGILGVEAYHAGAVRSLLSKKADRQLHPYTDVTVGPVADAISALRASAGGGKDAGITGSGDKYVLVPVDENAVVFSRSTEEVLAIVYLGSADAPGGFFPEGLN 1066
            L LECLEAEFYS+AAYG+GL++ L G GP+ +GGMKATL+  +Q YAEEIA NEI HV +LR  LG+ A ACPQ+DIGPAFAA A+AA      PP++PY N  SFLLGAF+FEDVGVTAY+GAAPL+ +  +LS AA IL VEAYH G++R+LL ++ D  L P+T  TVG      SALRAS GGGKD  +   G   ++ PVDEN++ F+R+  EVL IVYLGSA  PGGFFP G+N
Sbjct:   72 LQLECLEAEFYSYAAYGYGLTDDLRGYGPEPIGGMKATLSPEVQAYAEEIAKNEIAHVGVLRAALGNLAPACPQIDIGPAFAAVANAAAATVFDPPYTPYDNDTSFLLGAFLFEDVGVTAYNGAAPLLTNKGILSTAASILAVEAYHGGSLRTLLYQQEDVVLTPHT-FTVGEAVALASALRASVGGGKDKALETDGVLSIM-PVDENSLAFARTATEVLNIVYLGSASTPGGFFPNGIN 309          
BLAST of mRNA_P-wetherbeei_contig1530.1.1 vs. uniprot
Match: I0YQP4_COCSC (Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YQP4_COCSC)

HSP 1 Score: 258 bits (659), Expect = 2.580e-78
Identity = 155/283 (54.77%), Postives = 186/283 (65.72%), Query Frame = 2
Query:  269 LHLVARPASVEATRSVAQDKAILNFALNLECLEAEFYSWAAYGHGLSETLLGGGPKSVGGMKATLNETIQYYAEEIADNEIHHVALLRGILGDDAIACPQMDIGPAFAAAADAAIGATLCP-PFSPYRNGNSFLLGAFIFEDVGVTAYHGAAPLILDADVLSYAAGILGVEAYHAGAVRSLLSKKADRQLHPYTDVTVGPVADAISALRASAGGGKDAGITG---SGDKYV----------LVPVDENAVVFSRSTEEVLAIVYLGSADAPGGFFPEGLNGAI 1075
            L +VA  A   A  +   D  ILNFALNLECLEAEFYS+AA+G GL+ TLLGGGP S GG KA L+  +Q YA EIA++E++HVA LR  LGD A+ CPQ+DIG AF+A  DAA+G+      FSPY N   FLLG+F+FEDVGVTAY GAAP I D  VL  A GIL VEAYHAG +R+LL +     + PY   TV  V  A+S LRA+ GGGKD GIT     G  YV          LVP +  ++ F+R+  EVLAIVY GSA  PG FFPEG+N  +
Sbjct:    6 LAIVASLAVFAAPSAAITDIQILNFALNLECLEAEFYSYAAFGKGLNATLLGGGPGSTGGQKAKLSYAVQQYALEIAEDELNHVAFLRSALGDKAVPCPQIDIGTAFSAIIDAALGSKATSYKFSPYDNDLDFLLGSFLFEDVGVTAYLGAAPAITDKTVLGAAGGILAVEAYHAGIIRTLLYQDGAYPVVPYKIQTVDFV-QALSNLRAAVGGGKDQGITSPAADGSLYVPYLTSKYESNLVPTNAASLAFARTIPEVLAIVYGGSASTPGAFFPEGINPGV 287          
BLAST of mRNA_P-wetherbeei_contig1530.1.1 vs. uniprot
Match: A0A7L9QEA2_9CHLO (Putative extracellular protein CSOL_059a n=1 Tax=Pseudococcomyxa simplex TaxID=464287 RepID=A0A7L9QEA2_9CHLO)

HSP 1 Score: 257 bits (656), Expect = 7.200e-78
Identity = 157/284 (55.28%), Postives = 191/284 (67.25%), Query Frame = 2
Query:  260 AAILHLVARPASVEATRSVAQDKAILNFALNLECLEAEFYSWAAYGHGLSETLLGGGPKSVGGMKATLNETIQYYAEEIADNEIHHVALLRGILGDDAIACPQMDIGPAFAAAADAAIGATLCP-PFSPYRNGNSFLLGAFIFEDVGVTAYHGAAPLILD-ADVLSYAAGILGVEAYHAGAVRSLLSKKADRQLHPYTDVTVGPVADAISALRASAGGGKDAGIT---GSGDKYV----------LVPVDENAVVFSRSTEEVLAIVYLGSADAPGGFFPEGLN 1066
            A IL LVA  A + A  +   D  ILNFALNLECLEAEFYS+AA+G GL+ TLLGGGP + GG KA L+ ++Q YA EIA +EI+HVA LR  LG  AI CPQ+DIG AF+A  +AA+G       FSPY N   FLLGAF+FEDVGVTAY GAAP I D   VL+ AAGIL VEAYHAG +R+LL +     + PY   TV  V  A+S LRA+ GGGKD GIT    +G  Y+          LVP +++++ F+R+  EVLAIVY GSA  PG FFP+G+N
Sbjct:    2 ALILALVASLAVLAAPSAAITDVNILNFALNLECLEAEFYSYAAFGKGLNATLLGGGPGATGGEKAQLSYSVQQYATEIAQDEINHVAFLRSALGAAAIPCPQIDIGAAFSAVINAALGTKATSYKFSPYDNDLDFLLGAFLFEDVGVTAYSGAAPFISDKTTVLAAAAGILSVEAYHAGIIRTLLFQDGAYPVKPYKIQTVDFV-QALSNLRAAVGGGKDKGITDPPANGSLYIPYLTSKYSSNLVPTNDDSLAFARTIPEVLAIVYGGSASTPGAFFPQGIN 284          
BLAST of mRNA_P-wetherbeei_contig1530.1.1 vs. uniprot
Match: UPI00166CE419 (ferritin-like domain-containing protein n=1 Tax=Deinococcus roseus TaxID=392414 RepID=UPI00166CE419)

HSP 1 Score: 243 bits (621), Expect = 1.180e-72
Identity = 148/252 (58.73%), Postives = 167/252 (66.27%), Query Frame = 2
Query:  332 ILNFALNLECLEAEFYSWAAYGHGLSETLLGGGPKSVGGMKATLNETIQYYAEEIADNEIHHVALLRGI---LGDDAIACPQMDIGPAFAAAADAAIGATLCPPFSPYRNGNSFLLGAFIFEDVGVTAYHGAAPLILDADVLSYAAGILGVEAYHAGAVRSLLSKKADRQLHPYTDVTVGPVADAISALRASAGGGKDAGITGSGDKYVLVPVDENAVVFSRSTEEVLAIVYLGSADAPGGFFPEGLNGAIR 1078
            +LNFALNLE LEAEFY WAA+G GLS    GGGP + GG KATL+  +Q  AEEIA +E  HV  LR     LG   +A PQ+DIGPAFAAAADAA G  +   FSPY N   F  GAFIFEDVGVTAY GAA LI   DVL  AAGIL VEAYHAG +RS L  + D  + P   +TV  V  AISALR S GGGKD GIT  G K  +V  D NA+ + R+T EVL IVYL +    GGFFP GLNG I+
Sbjct:   42 VLNFALNLEYLEAEFYLWAAFGAGLSNADAGGGPAATGGKKATLSAALQQRAEEIARDEEAHVKALRATITKLGGTPVARPQLDIGPAFAAAADAASGGKI-KGFSPYTNDLFFAHGAFIFEDVGVTAYSGAATLITSPDVLQAAAGILAVEAYHAGEIRSYLYDQKDTVVVP--GLTVEDVVAAISALRGSVGGGKDEGIT-KGGKANIVAADANAIAYHRTTREVLNIVYLAAGATKGGFFPNGLNGNIK 289          
BLAST of mRNA_P-wetherbeei_contig1530.1.1 vs. uniprot
Match: A0A8J9RR61_9CHLO (Desiccation-related protein PCC13-62 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RR61_9CHLO)

HSP 1 Score: 242 bits (618), Expect = 1.270e-71
Identity = 146/280 (52.14%), Postives = 181/280 (64.64%), Query Frame = 2
Query:  266 ILHLVARPASVEATRSVAQDKAILNFALNLECLEAEFYSWAAYGHGLSETLLGGGPKSVGGMKATLNETIQYYAEEIADNEIHHVALLRGILGDDAIACPQMDIGPAFAAAADAAIG-ATLCPPFSPYRNGNSFLLGAFIFEDVGVTAYHGAAPLILDADVLSYAAGILGVEAYHAGAVRSLLSKKADRQLHPYTDVTVGPVADAISALRASAGGGKDAGITG---SGDKYV-----LVPVDENAVVFSRSTEEVLAIVYLGSADAPGGFFPEGLNGAIR 1078
            I+  +A  A V ++     D  ILNFALNLECLEA+FYS+AAYG GL+ TL GGGP + GG KA L+  +Q YA EIA +E++HVA LR  LG  A+ CPQ+D+GPAFAA   AA+G A +   FSPY N   FLL AFI EDVGVTAY+GAAPLI     +  AA IL  EAYH G +R+LL ++    + PY+  TV   A  +S LR + GGGKD GIT    +G K       LVP D N++VF+R+  EVL IVY GSA  P  F+P G+NG I 
Sbjct:   49 IVTALAALALVASSTEAVTDADILNFALNLECLEADFYSYAAYGSGLNSTLRGGGPMATGGKKAVLSSPVQNYANEIALDEVNHVAFLRMALGTAAVPCPQIDVGPAFAAIVKAALGSANMDTMFSPYDNDLDFLLAAFILEDVGVTAYNGAAPLIQAKKNVGAAASILATEAYHGGIIRTLLYQRGYDTVMPYSLQTV-DFAQKLSNLRGTVGGGKDEGITSPMANGVKNTPYSSNLVPTDSNSLVFARTPTEVLNIVYGGSAAKPSAFYPNGVNGNIN 327          
BLAST of mRNA_P-wetherbeei_contig1530.1.1 vs. uniprot
Match: A0A511MYZ7_9DEIO (Uncharacterized protein n=1 Tax=Deinococcus cellulosilyticus NBRC 106333 = KACC 11606 TaxID=1223518 RepID=A0A511MYZ7_9DEIO)

HSP 1 Score: 239 bits (610), Expect = 4.830e-71
Identity = 147/255 (57.65%), Postives = 171/255 (67.06%), Query Frame = 2
Query:  323 DKAILNFALNLECLEAEFYSWAAYGHGLSETLLGGGPKSVGGMKATLNETIQYYAEEIADNEIHHVALLRGI---LGDDAIACPQMDIGPAFAAAADAAIGATLCPPFSPYRNGNSFLLGAFIFEDVGVTAYHGAAPLILDADVLSYAAGILGVEAYHAGAVRSLLSKKADRQLHPYTDVTVGPVADAISALRASAGGGKDAGITGSGDKYVLVPVDENAVVFSRSTEEVLAIVYLGSADAPGGFFPEGLNGAIR 1078
            D  +LNFALNLE LEAEFY WAA+G GLS    GGGP + GG KATL+  IQ  AEEIA +E  HV  LR     LG   +  PQ+DIGPAFAAAADAA G  +   FSPY N   F+ GAF+FEDVGVTAY+GAA L+ D+ VL  AAGIL VEAYHAGA+R  L +  +R       +TV  V  AISALR   GGGKD GIT  G K  +V  D NA+ ++R+T EVL IVYLG + A GGFFP GLNG I+
Sbjct:   39 DLDVLNFALNLEYLEAEFYLWAAFGTGLSAADAGGGPVATGGKKATLSAGIQQIAEEIARDEEAHVRALRATITKLGGTPVPRPQIDIGPAFAAAADAASGGKI-KGFSPYANDLFFMHGAFVFEDVGVTAYNGAATLLTDSGVLQAAAGILAVEAYHAGAIRHYLYE--NRTTPVAAGLTVEDVVAAISALRGKVGGGKDEGIT-KGGKANIVAADANAIAYARTTREVLNIVYLGGS-AKGGFFPNGLNGTIK 288          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1530.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CND4_9STRA5.980e-9463.71Ferritin-like domain-containing protein (Fragment)... [more]
A0A836CQA2_9STRA2.030e-8962.15Ferritin-like domain-containing protein (Fragment)... [more]
A0A835ZGC8_9STRA4.620e-8962.50Ferritin-like domain-containing protein n=1 Tax=Tr... [more]
A0A836CMD7_9STRA2.090e-8860.38Ferritin-like domain-containing protein n=1 Tax=Tr... [more]
A0A835YUW9_9STRA3.860e-8260.42Ferritin-like domain-containing protein n=3 Tax=Tr... [more]
I0YQP4_COCSC2.580e-7854.77Uncharacterized protein n=1 Tax=Coccomyxa subellip... [more]
A0A7L9QEA2_9CHLO7.200e-7855.28Putative extracellular protein CSOL_059a n=1 Tax=P... [more]
UPI00166CE4191.180e-7258.73ferritin-like domain-containing protein n=1 Tax=De... [more]
A0A8J9RR61_9CHLO1.270e-7152.14Desiccation-related protein PCC13-62 n=1 Tax=Cocco... [more]
A0A511MYZ7_9DEIO4.830e-7157.65Uncharacterized protein n=1 Tax=Deinococcus cellul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1530contigP-wetherbeei_contig1530:2..2652 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog248742.XP_005645257.1
PFAMsFerritin_2
Model size1757
Max annot lvl33090|Viridiplantae
Hectar predicted targeting categorysignal peptide
Exons3
Evalue3.13e-83
EggNOG OGs2CMPR@1|root,2QR8B@2759|Eukaryota,37II1@33090|Viridiplantae
DescriptionDesiccation-related protein PCC13-62-like
Cds size849
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186051.8215406-UTR-P-wetherbeei_contig1530:1..6771683186051.8215406-UTR-P-wetherbeei_contig1530:1..677Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1530 2..677 -
1683186051.8573215-UTR-P-wetherbeei_contig1530:2420..26521683186051.8573215-UTR-P-wetherbeei_contig1530:2420..2652Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1530 2421..2652 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186051.8313708-CDS-P-wetherbeei_contig1530:677..9801683186051.8313708-CDS-P-wetherbeei_contig1530:677..980Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1530 678..980 -
1683186051.8400795-CDS-P-wetherbeei_contig1530:1428..18331683186051.8400795-CDS-P-wetherbeei_contig1530:1428..1833Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1530 1429..1833 -
1683186051.848703-CDS-P-wetherbeei_contig1530:2279..24201683186051.848703-CDS-P-wetherbeei_contig1530:2279..2420Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1530 2280..2420 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1530.1.1prot_P-wetherbeei_contig1530.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1530 678..2420 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1530.1.1

>prot_P-wetherbeei_contig1530.1.1 ID=prot_P-wetherbeei_contig1530.1.1|Name=mRNA_P-wetherbeei_contig1530.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=283bp
MTRACRIAFAAILHLVARPASVEATRSVAQDKAILNFALNLECLEAEFYS
WAAYGHGLSETLLGGGPKSVGGMKATLNETIQYYAEEIADNEIHHVALLR
GILGDDAIACPQMDIGPAFAAAADAAIGATLCPPFSPYRNGNSFLLGAFI
FEDVGVTAYHGAAPLILDADVLSYAAGILGVEAYHAGAVRSLLSKKADRQ
LHPYTDVTVGPVADAISALRASAGGGKDAGITGSGDKYVLVPVDENAVVF
SRSTEEVLAIVYLGSADAPGGFFPEGLNGAIR*
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mRNA from alignment at P-wetherbeei_contig1530:2..2652-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1530.1.1 ID=mRNA_P-wetherbeei_contig1530.1.1|Name=mRNA_P-wetherbeei_contig1530.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2651bp|location=Sequence derived from alignment at P-wetherbeei_contig1530:2..2652- (Phaeothamnion wetherbeei SAG_119_79)
TGCGCAAACTATTCAAAATTATAAAGTCCTTCGTGCGTTCCTTATCCAAA AAGTTTCAAATTTTGAACCTTTGGGCAGCACGTTTCCTCTTGCCATTGAA CCGGGCGGTTACCATAGTAATTCCCCTTGAATTCCCCACCTAGAGTCGGA GAATGGATTCCGCCCGATTCCCAAGACACAACACGCAAGCAAGAACAAAG AACGAGATCTAATACTCCACCCAAACAAAACAATGACGAGGGCTTGCCGT ATCGCATTCGCCGCCATTCTTCACCTTGTTGCCCGCCCTGCGAGCGTCGA GGCCACCCGCTCCGTTGCCCAGGACAAGGCTATTCTCAACTTTGCGCTCA ACCTGGAGTGTCTTGAGGCCGAGGTGAGCGGCATCGAAGCTGCCTCGCTC GCTCCTTCCACGGCTGCCTCTCGTCGCTCCGCCAAATGGCCGGCCATTAA CGCCTTCGTTTGGATTCAAGAGAAGGGGCGCTCATCCTCTCTCCTTCACG TTTCCTTTTAACCTTTCGGCGTCTTTTTTCCGTCTACCTTCTGACCTCTT TTCTGCCTATTTCAGCTCTGGTGTTGCAGCTTTCTCTTCGTCTTTCCTTT ATTGTGGCTTTCGCTTCTTGTTGGCTGCATGAACCACTTGCTTCACCTCC TCGCTTCTTCCCGCTAGCTGGCCCTTGTTGCGTTTCCCTCCACTTCTTGT GCCGCGCGCCCGCCCTTTCTCCCCTCCTTTTTCCGTTGCTTCCGCTACAC TGCCACCGCCCCGGTATTAATATCCAACTCGCTCGCTCGTGTGCGCCGTC ACTTTCCGTGTGGCCGCAGTTCTACTCGTGGGCGGCATATGGGCACGGGC TCAGCGAGACTCTGCTCGGAGGCGGCCCCAAGTCTGTCGGCGGCATGAAG GCCACCCTGAACGAGACGATCCAGTACTACGCGGAAGAGATTGCGGACAA CGAGATCCACCACGTCGCTCTTCTGCGCGGCATCCTCGGCGACGACGCCA TTGCCTGCCCGCAGATGGACATCGGACCGGCCTTCGCCGCCGCCGCCGAT GCCGCCATCGGTGCAACACTCTGCCCGCCCTTCAGCCCCTACCGCAATGG TAACTCGTTCCTGCTCGGTGCCTTCATCTTCGAGGATGTAGGCGTGACGG CGTACCACGGCGCGGCCCCACTCATCCTCGACGCTGACGTTCTCTCTTAC GCCGCCGGCATTCTTGGCGTCGAGGTGCGCGCGCGCACTGCGTCGCTCTT CACTGTTCCCGTATTGTTCATTTTTTCTTCTTCGCCCTTCGTGTGGCTGA AATGTGGAAGAAGATTCTGGTTCGCTGGGTTGCTTCAAAAGCTTGGTGCG GACGAAGATTGGTTGGCACCGTCTGTGTTGCTTCCTTGCCAGAGGCGGCC AACGTAGCTACTCAGTGGCTGCACGCACCGTCTGACGCATTCTCTTTGCT CTTGCTTCCCACTCGTGCCCGAGGCGCCGGTGCCTAGATACCCGCCCGTT TCTCCGCCGCCGCTCATCCTCCGCGGCCTTCTGTTTCTGCATCTGCCCGC CGCCGTTGGCGCACGGCCCTGCGGAGCGACGGTCGCCCGTCCACCGTCTC TCGATTTCTGCTTCTCTCACTCCCGCCCCTTCTTCTACCTCACTCGTCTG CCCCCCGTTCTCGCACAATCAGGCCTACCACGCCGGGGCCGTGCGCTCGC TGCTGTCCAAGAAAGCCGACCGGCAGCTGCACCCATACACCGATGTCACC GTTGGACCCGTCGCGGATGCCATATCGGCGCTGCGGGCTTCCGCTGGTGG CGGCAAGGACGCCGGCATCACGGGCAGTGGCGACAAGTACGTACTGGTGC CGGTAGACGAGAACGCGGTGGTCTTTTCGCGGTCCACGGAAGAGGTGCTG GCGATTGTGTACCTCGGCAGCGCCGATGCGCCCGGCGGCTTCTTTCCCGA AGGCCTCAACGGCGCCATTCGCTAGAGCAACGGACCGACTGGGAGCTGCT GCGCACGTGTTCTATCATCGTCGGCGGTCGTGGCATGCTGGCGGCTGCTG GCTTCGACGAGACGCTCGTTTTTGTAGCGCGCGGTGGCGTGGGAACGAAC TGTTTGGCTGATGGCAGCGTGAGGCAGGCTGCTTGTTGTGGTGGCTAATG GCGACGGGTTCTGCTGTCGCGCCTTACCTTCGGCAGGGAAGCGCGTGCGG CGTGCCCGGAGCCGCAGGCAGAGGAGCCATCCTTTGCTTTTTCTTCATTT TCGCCCTCCTCCGGTCGCTTGGACGCACGGGCGAGCGGTTGACATTTCGG GTGGAGGGCTCAGCGCGGACGTCGGCGTCACATCGCTCTTTCTCTAGGGG AGGTTGCGGCGGACAGGAGCGCCTGCGCGCCGGTAGCAGTTGTTGTCTGC TCTAGATCTATCTGTCTTTTGAAAGCACCATAGGGGCAGGGATGGGGCTT TCGTGACGGGTAGGTTCCGGGGCGAACGGGAAGAAGAGGACGGCGAGCCA CTACATTTTGGGGAAGGTCTCCACCAGCCTGCGTTTGAAACGGTTAAGGA TGATGCGTGGCTGGTGTCAGCTGCCCGAGATTGCTGCAACCGTGTGGTTT GGGGGGCTGTGCCGGCGGTACCCTTTCCTTTTCGCGACAAGCGTCCGATT A
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1530:2..2652-

>mRNA_P-wetherbeei_contig1530.1.1 ID=mRNA_P-wetherbeei_contig1530.1.1|Name=mRNA_P-wetherbeei_contig1530.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=849bp|location=Sequence derived from alignment at P-wetherbeei_contig1530:2..2652- (Phaeothamnion wetherbeei SAG_119_79)
ATGACGAGGGCTTGCCGTATCGCATTCGCCGCCATTCTTCACCTTGTTGC
CCGCCCTGCGAGCGTCGAGGCCACCCGCTCCGTTGCCCAGGACAAGGCTA
TTCTCAACTTTGCGCTCAACCTGGAGTGTCTTGAGGCCGAGTTCTACTCG
TGGGCGGCATATGGGCACGGGCTCAGCGAGACTCTGCTCGGAGGCGGCCC
CAAGTCTGTCGGCGGCATGAAGGCCACCCTGAACGAGACGATCCAGTACT
ACGCGGAAGAGATTGCGGACAACGAGATCCACCACGTCGCTCTTCTGCGC
GGCATCCTCGGCGACGACGCCATTGCCTGCCCGCAGATGGACATCGGACC
GGCCTTCGCCGCCGCCGCCGATGCCGCCATCGGTGCAACACTCTGCCCGC
CCTTCAGCCCCTACCGCAATGGTAACTCGTTCCTGCTCGGTGCCTTCATC
TTCGAGGATGTAGGCGTGACGGCGTACCACGGCGCGGCCCCACTCATCCT
CGACGCTGACGTTCTCTCTTACGCCGCCGGCATTCTTGGCGTCGAGGCCT
ACCACGCCGGGGCCGTGCGCTCGCTGCTGTCCAAGAAAGCCGACCGGCAG
CTGCACCCATACACCGATGTCACCGTTGGACCCGTCGCGGATGCCATATC
GGCGCTGCGGGCTTCCGCTGGTGGCGGCAAGGACGCCGGCATCACGGGCA
GTGGCGACAAGTACGTACTGGTGCCGGTAGACGAGAACGCGGTGGTCTTT
TCGCGGTCCACGGAAGAGGTGCTGGCGATTGTGTACCTCGGCAGCGCCGA
TGCGCCCGGCGGCTTCTTTCCCGAAGGCCTCAACGGCGCCATTCGCTAG
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