mRNA_P-wetherbeei_contig153.8.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig153.8.1 vs. uniprot
Match: A0A3C0TV47_9PROT (Cytochrome c oxidase subunit 2 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TV47_9PROT) HSP 1 Score: 400 bits (1027), Expect = 3.450e-138 Identity = 199/267 (74.53%), Postives = 231/267 (86.52%), Query Frame = 1
Query: 10 ISKTRRFIGEALAVMLSLFVSVNAAIAETAHDWQLGFQPAASPVMENIISFHNILLVLITVITLFVLALLLYIMVRFNSRANPVPSTTTHNTALEIVWTVIPIIILVVMAIPSFKLLYQADVVPESEMTLKLTGNQWYWNVEYPDHDSLTYDITMLEDADRPADAPRLLAVDNEIVVPVGTTIRVITTSVDVIHAFAMPVMGLKIDAIPGHLNETWFKATREGTFYGQCSEICGSRHAFMPTALRVVSKEAFATWLEEAKVKYASAP 810
IS+ R + ALA ++ A+AET +WQLGF PAASP+ME + FHN+LLV+IT+I FVLALLL+IM+RFNSRANP PSTTTHNT LE+VWTVIP++ILV +AIPSF+LLY ADVVPE++MTLKLTGNQW+WN+EYPD D LTYDITMLEDADRPADAPRLLAVDN+IVVPV TTIR+ TSVDVIHAFA+P MG+KIDAIPGHLNETWFKATREG FYGQCSE+CG+RHAFMPTA++VVSKE F+ W+EEAKVKYAS P
Sbjct: 4 ISQYRNLLAGALAATAFFLITGGVAVAETPVNWQLGFPPAASPIMEQLNGFHNMLLVIITLIAGFVLALLLFIMLRFNSRANPTPSTTTHNTPLEVVWTVIPVLILVAIAIPSFRLLYAADVVPEADMTLKLTGNQWFWNIEYPDQDQLTYDITMLEDADRPADAPRLLAVDNDIVVPVDTTIRMQVTSVDVIHAFALPAMGVKIDAIPGHLNETWFKATREGVFYGQCSELCGARHAFMPTAVKVVSKEEFSKWIEEAKVKYASRP 270
BLAST of mRNA_P-wetherbeei_contig153.8.1 vs. uniprot
Match: A0A352KEW6_9PROT (Cytochrome c oxidase subunit 2 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KEW6_9PROT) HSP 1 Score: 368 bits (944), Expect = 1.450e-125 Identity = 186/280 (66.43%), Postives = 224/280 (80.00%), Query Frame = 1
Query: 7 SISKTRRFIGEALAVMLSLFVSVNAAIAETAHDWQLGFQPAASPVMENIISFHNILLVLITVITLFVLALLLYIMVRFNSRANPVPSTTTHNTALEIVWTVIPIIILVVMAIPSFKLLYQADVVPESEMTLKLTGNQWYWNVEYPDHDSLTYDITMLEDADRPADAPRLLAVDNEIVVPVGTTIRVITTSVDVIHAFAMPVMGLKIDAIPGHLNETWFKATREGTFYGQCSEICGSRHAFMPTALRVVSKEAFATWLEEAKVKYASAPVKAPVLASATAA 846
SI K R + L + + F AA A+ +WQLGFQ +ASP+ME+I SFHN LLV+IT ITLFVL LL+ IM+RFNSRANP PST THNT LE++WT +PI+ILVV+AIPSF+LLY DVVPES+MT+KL GNQW+W VEYPDHD L+YDI MLED +R D PRLLAVDN+IVVPV T+RVITTSVDVIHAFA P +G+KIDA+PG LNETWFKATREGTFYGQCSE+CG+RHAFMPTA+RVVS++ F WLEEA+ ++ + + PV +A AA
Sbjct: 3 SIKKYRAYWVGFLTFIFAPFYGATAAFADLPENWQLGFQASASPIMESITSFHNFLLVVITAITLFVLVLLVIIMLRFNSRANPEPSTRTHNTLLEVIWTTVPILILVVIAIPSFRLLYAEDVVPESDMTVKLIGNQWFWTVEYPDHDDLSYDIIMLEDDERETDDPRLLAVDNDIVVPVNKTVRVITTSVDVIHAFATPALGVKIDAVPGRLNETWFKATREGTFYGQCSELCGARHAFMPTAIRVVSEQEFTAWLEEAQEEFGAVEQEQPVQLAANAA 282
BLAST of mRNA_P-wetherbeei_contig153.8.1 vs. uniprot
Match: A0A6N7FGX1_9PROT (Cytochrome c oxidase subunit 2 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FGX1_9PROT) HSP 1 Score: 318 bits (814), Expect = 9.370e-106 Identity = 161/270 (59.63%), Postives = 208/270 (77.04%), Query Frame = 1
Query: 34 GEALAVMLSLFVSVNAAIAETAHDWQLGFQPAASPVMENIISFHNILLVLITVITLFVLALLLYIMVRFNSRANPVPSTTTHNTALEIVWTVIPIIILVVMAIPSFKLLYQADVVPESEMTLKLTGNQWYWNVEYPDHDSLTYDITMLEDADRPADAPRLLAVDNEIVVPVGTTIRVITTSVDVIHAFAMPVMGLKIDAIPGHLNETWFKATREGTFYGQCSEICGSRHAFMPTALRVVSKEAFATWLEEAKVKYASAPVKAPVLASATA 843
G ALAV+L+ VS AA+A WQLGFQPAA+PVM+ I FHN+LL +I +ITLFV+AL+ Y+MV+F++R NP PS TTHNT +E++WTVIP++ILVV+A+PSFKLLY+ DV+P+++MTLK G+QWYW+ EYPDH + +D M+ DAD PRLL DNE+VVPV TT+RVI T+ DV+H++AMP G+K+DA+PG LNE WFKA REGT+YGQCSE+CG+ HAFMP +RVV KEAF W EAK K+A+A +A A A
Sbjct: 15 GCALAVLLTT-VS-GAALAAQPTPWQLGFQPAATPVMQEITDFHNLLLWIIALITLFVMALMAYVMVKFSARRNPNPSRTTHNTMVEVLWTVIPVVILVVIAVPSFKLLYREDVLPKADMTLKAVGHQWYWSYEYPDHGNFKFDALMVPDADIKPGQPRLLETDNEVVVPVDTTVRVIVTADDVLHSWAMPAFGVKVDAVPGRLNELWFKAEREGTYYGQCSELCGTNHAFMPIKVRVVGKEAFDAWTAEAKSKFAAADAPERRVAEAAA 282
BLAST of mRNA_P-wetherbeei_contig153.8.1 vs. uniprot
Match: A0A833GEE7_9HYPH (Cytochrome c oxidase subunit 2 n=1 Tax=Pseudorhodoplanes sp. TaxID=1934341 RepID=A0A833GEE7_9HYPH) HSP 1 Score: 302 bits (774), Expect = 9.300e-100 Identity = 153/263 (58.17%), Postives = 191/263 (72.62%), Query Frame = 1
Query: 22 RRFIGEALAVMLSLFVSVNAAIAETAH--DWQLGFQPAASPVMENIISFHNILLVLITVITLFVLALLLYIMVRFNSRANPVPSTTTHNTALEIVWTVIPIIILVVMAIPSFKLLYQADVVPESEMTLKLTGNQWYWNVEYPDHDSLTYDITMLEDADRPADAPRLLAVDNEIVVPVGTTIRVITTSVDVIHAFAMPVMGLKIDAIPGHLNETWFKATREGTFYGQCSEICGSRHAFMPTALRVVSKEAFATWLEEAKVKYAS 804
R I A A L VS A IA T WQLG Q AA+PVMENI FHN+LL +IT I+LFVL LL+ +MVRFN+R+NP PS TTHNT LE+ WTVIP+++LV +A+PSF+LL+ +P++++T+K TG QW+W+ YPDH +D ML+D DR + PRLLAVDN++VVPV +RV DVIHAFA+P G+KIDA+PG LNETWFKA REG +YGQCSE+CG HAFMP A+RVVS FA W+EE K KYA+
Sbjct: 5 RFLIAFAWAAAAVLAVSAQA-IASTGQPSSWQLGLQAAATPVMENIAWFHNLLLYIITAISLFVLLLLVIVMVRFNARSNPTPSKTTHNTLLEVAWTVIPVLVLVTIAVPSFRLLFFQQAIPQADVTVKATGKQWFWSYSYPDHGKFEFDSLMLQDKDRKPNQPRLLAVDNDLVVPVNKVVRVQVIGADVIHAFAVPAFGIKIDAVPGRLNETWFKAEREGVYYGQCSELCGKDHAFMPIAVRVVSDREFAAWIEETKKKYAT 266
BLAST of mRNA_P-wetherbeei_contig153.8.1 vs. uniprot
Match: UPI001A972DE4 (cytochrome c oxidase subunit II n=1 Tax=Azospirillum sp. SYSU D00513 TaxID=2812561 RepID=UPI001A972DE4) HSP 1 Score: 301 bits (772), Expect = 1.480e-99 Identity = 152/261 (58.24%), Postives = 190/261 (72.80%), Query Frame = 1
Query: 16 KTRRFIGEALAVMLSLFVSVNAAIAETAHDWQLGFQPAASPVMENIISFHNILLVLITVITLFVLALLLYIMVRFNSRANPVPSTTTHNTALEIVWTVIPIIILVVMAIPSFKLLYQADVVPESEMTLKLTGNQWYWNVEYPDHDSLTYDITMLEDADRPADAPRLLAVDNEIVVPVGTTIRVITTSVDVIHAFAMPVMGLKIDAIPGHLNETWFKATREGTFYGQCSEICGSRHAFMPTALRVVSKEAFATWLEEAKVKY 798
K + ALA ++SL A A+ H WQLG Q A +PV + SFHN+L V+I ITLFVLALL+YI VRFN ANP PS TTH+T LE+ WTV+P+IIL+V+A+PSFKLLY A+ VPESEMT+K+TG QWYW+ EYPDH + + M++D PRLL VDN +VVPV TT+R+I T DVIHA+ +P G+K DAIPG +NETWFKA +EG +YGQCSEICG H FMP A+ VVSK+AFA W+E+AKV +
Sbjct: 2 KRQTLFAAALAAVVSLIGFSGIASADQPHPWQLGLQDAVTPVKHLMDSFHNLLTVIIVAITLFVLALLVYIGVRFNRNANPNPSKTTHHTLLEVAWTVVPVIILIVIAVPSFKLLYVAEQVPESEMTVKVTGRQWYWDYEYPDHGDIAFSSYMVQDDALKPGQPRLLEVDNRVVVPVDTTVRLIVTGGDVIHAWTIPAFGVKKDAIPGRINETWFKAEKEGVYYGQCSEICGVNHGFMPIAVEVVSKDAFAAWVEKAKVAF 262
BLAST of mRNA_P-wetherbeei_contig153.8.1 vs. uniprot
Match: A0A081BAE5_9HYPH (Cytochrome c oxidase subunit 2 n=2 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BAE5_9HYPH) HSP 1 Score: 301 bits (772), Expect = 1.870e-99 Identity = 145/241 (60.17%), Postives = 187/241 (77.59%), Query Frame = 1
Query: 79 AAIAETAHDWQLGFQPAASPVMENIISFHNILLVLITVITLFVLALLLYIMVRFNSRANPVPSTTTHNTALEIVWTVIPIIILVVMAIPSFKLLYQADVVPESEMTLKLTGNQWYWNVEYPDHDSLTYDITMLEDADRPADAPRLLAVDNEIVVPVGTTIRVITTSVDVIHAFAMPVMGLKIDAIPGHLNETWFKATREGTFYGQCSEICGSRHAFMPTALRVVSKEAFATWLEEAKVKYA 801
AA A H+WQ+GFQ +A+P+M+ + F N+LL +IT I+LFVLALLL +MVRFN++ANP PSTTTHNT +E+ WT+IP++ILV +AIPSF+LLY VVPE+++T+K TG QWYW EYPDH + YD M+EDAD PRLL D E+VVPV IR+ T+ DVIHA+ +P G+KIDA+PG LNETWFKAT+ GT+YGQCSE+CG RHAFMP +RVV++E FA+W E A+ +YA
Sbjct: 24 AAFAGQPHEWQMGFQQSATPIMDQLTWFDNMLLYIITAISLFVLALLLIVMVRFNAKANPEPSTTTHNTLIEVAWTIIPVLILVTIAIPSFRLLYNQVVVPEADVTIKATGYQWYWGYEYPDHGGMIYDALMVEDADLKEGQPRLLETDTEVVVPVNKVIRLQVTAADVIHAWTIPAFGVKIDAVPGRLNETWFKATKTGTYYGQCSELCGIRHAFMPIKVRVVTEEEFASWTEWAQQEYA 264
BLAST of mRNA_P-wetherbeei_contig153.8.1 vs. uniprot
Match: A0A2E6U093_9HYPH (Cytochrome c oxidase subunit 2 n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2E6U093_9HYPH) HSP 1 Score: 298 bits (764), Expect = 3.060e-98 Identity = 151/252 (59.92%), Postives = 188/252 (74.60%), Query Frame = 1
Query: 82 AIAETAHDWQLGFQPAASPVMENIISFHNILLVLITVITLFVLALLLYIMVRFNSRANPVPSTTTHNTALEIVWTVIPIIILVVMAIPSFKLLYQADVVPESEMTLKLTGNQWYWNVEYPDHDSLTYDITMLEDADRPADAPRLLAVDNEIVVPVGTTIRVITTSVDVIHAFAMPVMGLKIDAIPGHLNETWFKATREGTFYGQCSEICGSRHAFMPTALRVVSKEAFATWLEEAKVKYASAPVKAPVLASA 837
A A DWQ+ FQ AAS M I F+N LL+L+T I++FVL L+LY+MVRFN+RANP PS TTHNT +E++WTV+PI+ILVV+AIPSF+LLY +PE++MT+K TG QWYW EYPDH +D ML D +R D PRLLA D +VVPV TT+RVI T+ DV+HAFAMP GLK+DA+PG LNETWFKA + GT+YGQCSE+CG RHAFMP + VVSK FA W+EEA+ +YA ++ASA
Sbjct: 25 AAASQPKDWQITFQEAASENMTMITDFNNFLLILMTAISVFVLGLMLYVMVRFNARANPEPSKTTHNTLVEVIWTVVPIVILVVIAIPSFRLLYFQRDIPEADMTVKATGYQWYWGYEYPDHGDFAFDSLMLSDEER-GDQPRLLATDTAMVVPVDTTVRVIVTAADVLHAFAMPAFGLKMDAVPGRLNETWFKAEKTGTYYGQCSELCGIRHAFMPIRIEVVSKADFALWVEEAQSEYAEIDNADAMVASA 275
BLAST of mRNA_P-wetherbeei_contig153.8.1 vs. uniprot
Match: A0A2D7H3V1_9HYPH (Cytochrome c oxidase subunit 2 n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2D7H3V1_9HYPH) HSP 1 Score: 298 bits (763), Expect = 3.920e-98 Identity = 148/263 (56.27%), Postives = 195/263 (74.14%), Query Frame = 1
Query: 52 MLSLFVSVNAAIAETAHDWQLGFQPAASPVMENIISFHNILLVLITVITLFVLALLLYIMVRFNSRANPVPSTTTHNTALEIVWTVIPIIILVVMAIPSFKLLYQADVVPESEMTLKLTGNQWYWNVEYPDHDSLTYDITMLEDADRPADAPRLLAVDNEIVVPVGTTIRVITTSVDVIHAFAMPVMGLKIDAIPGHLNETWFKATREGTFYGQCSEICGSRHAFMPTALRVVSKEAFATWLEEAKVKYASAPVKAPVLASAT 840
+LSL + +AA+A WQLGFQ AA+ M I SF++ LLVL+ ITL VL L++Y+M+RFN++ NP PS TTHNT +E+VWTV+PI+ILV++AIPSF+LLY V+PE++MT+K TG QWYW EYPDH +D ML D +R D PRLLA D +VVPV T+RV+ T DV+H++AMP G+K+DA+PG LNETWF+A + GTFYGQCSE+CG RHAFMP + VV +E FA+W+EEAK +YA +LA+A+
Sbjct: 15 LLSLGMLPSAALAAQPKPWQLGFQDAATDNMAQITSFNDFLLVLMAAITLIVLGLMVYVMLRFNAKTNPEPSKTTHNTLVEVVWTVVPILILVIIAIPSFRLLYYQRVLPEADMTIKATGYQWYWGYEYPDHGGFAFDSLMLNDDER-GDQPRLLATDTAMVVPVNATVRVVVTGADVLHSWAMPAFGVKMDAVPGRLNETWFRAEQTGTFYGQCSELCGVRHAFMPIRVEVVEQEEFASWVEEAKAEYAQLETSQGMLAAAS 276
BLAST of mRNA_P-wetherbeei_contig153.8.1 vs. uniprot
Match: UPI001AEFBB1A (cytochrome c oxidase subunit II n=1 Tax=Luteithermobacter gelatinilyticus TaxID=2582913 RepID=UPI001AEFBB1A) HSP 1 Score: 298 bits (763), Expect = 4.790e-98 Identity = 149/267 (55.81%), Postives = 197/267 (73.78%), Query Frame = 1
Query: 46 AVMLSLFVSVNAAIAET-----AHDWQLGFQPAASPVMENIISFHNILLVLITVITLFVLALLLYIMVRFNSRANPVPSTTTHNTALEIVWTVIPIIILVVMAIPSFKLLYQADVVPESEMTLKLTGNQWYWNVEYPDHDSLTYDITMLEDAD-RPADAPRLLAVDNEIVVPVGTTIRVITTSVDVIHAFAMPVMGLKIDAIPGHLNETWFKATREGTFYGQCSEICGSRHAFMPTALRVVSKEAFATWLEEAKVKYASAPVKAPVL 828
A + +LF +++ +AE A Q+G A+ VM +++ FH++LL++ VIT VL L+LYIM++FN+R NP PS TTHNT LE+VWTV+PI+ILVV+A+PSFKLLY+ DV+PE+++T+K GNQWYW EYPDHD L +D ML D + + PRLLA DN +VVPVG T+RV T+ DVIHA+ +P G K+DA+PG LNETWFKA +EGT+YGQCSE+CG RH FMP + VVS+E +A WLEEAK ++AS K PVL
Sbjct: 12 AFLATLFAGLSSVMAEGDGIYYAAPKQVGLMQPATEVMRDLVGFHDMLLIICVVITALVLGLMLYIMMKFNARTNPNPSKTTHNTLLEVVWTVLPILILVVIAVPSFKLLYKQDVIPEADVTIKAIGNQWYWTYEYPDHDGLYFDAVMLTDEESEESGKPRLLATDNSVVVPVGKTVRVQVTANDVIHAWTIPAFGAKVDAVPGRLNETWFKAEKEGTYYGQCSELCGIRHGFMPIVVEVVSEEEYAAWLEEAKERFASNTSKRPVL 278
BLAST of mRNA_P-wetherbeei_contig153.8.1 vs. uniprot
Match: A0A1W9IFM1_9PROT (Cytochrome c oxidase subunit 2 n=1 Tax=Proteobacteria bacterium SG_bin9 TaxID=1827385 RepID=A0A1W9IFM1_9PROT) HSP 1 Score: 297 bits (761), Expect = 7.880e-98 Identity = 160/277 (57.76%), Postives = 204/277 (73.65%), Query Frame = 1
Query: 22 RRFIGEALAVMLSLFVSVNAAIAETAHD--WQLGFQPAASPVMENIISFHNILLVLITVITLFVLALLLYIMVRFNSRANPVPSTTTHNTALEIVWTVIPIIILVVMAIPSFKLLYQADVVPESEMTLKLTGNQWYWNVEYPDHDSLTYDITMLEDADRPADAPRLLAVDNEIVVPVGTTIRVITTSVDVIHAFAMPVMGLKIDAIPGHLNETWFKATREGTFYGQCSEICGSRHAFMPTALRVVSKEAFATWLEEAKVKYASAPVKAPVLASATAA 846
RR +G LA V+ AA A W+ Q +ASPVM+NI FHN+LLV+ITVITLFVLALL+ +MV+FN++ANPVPS TTHNT +E+VWTV+P++ILV +AIPSF+LL+Q VP++++T+K TG QWYW+ YPDH +D ++ D PRLL VDNE+VVPV +RV TT+ DVIHAFA+P G+KIDAIPG LNETWFKAT+ G +YGQCSE+CG HAFMP A+RVVS++ F TW+E+AK K+AS P V ASA+AA
Sbjct: 10 RRLLG--LAAGAFTLVAAGAAYAGLGQPTPWEYTLQESASPVMDNINWFHNLLLVIITVITLFVLALLIIVMVKFNAKANPVPSKTTHNTLIEVVWTVVPVLILVAIAIPSFRLLFQQLDVPKADVTIKATGKQWYWSYSYPDHGKFEFDSLLVADKQ-----PRLLGVDNELVVPVNKIVRVQTTAADVIHAFAVPSFGIKIDAIPGRLNETWFKATKLGMYYGQCSELCGKDHAFMPIAVRVVSEQEFNTWIEQAKKKFASTPDTNSV-ASASAA 278 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig153.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig153.8.1 >prot_P-wetherbeei_contig153.8.1 ID=prot_P-wetherbeei_contig153.8.1|Name=mRNA_P-wetherbeei_contig153.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=284bp MFSISKTRRFIGEALAVMLSLFVSVNAAIAETAHDWQLGFQPAASPVMENback to top mRNA from alignment at P-wetherbeei_contig153:9343..10194+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig153.8.1 ID=mRNA_P-wetherbeei_contig153.8.1|Name=mRNA_P-wetherbeei_contig153.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=852bp|location=Sequence derived from alignment at P-wetherbeei_contig153:9343..10194+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig153:9343..10194+ >mRNA_P-wetherbeei_contig153.8.1 ID=mRNA_P-wetherbeei_contig153.8.1|Name=mRNA_P-wetherbeei_contig153.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=852bp|location=Sequence derived from alignment at P-wetherbeei_contig153:9343..10194+ (Phaeothamnion wetherbeei SAG_119_79)back to top |