mRNA_P-wetherbeei_contig15270.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15270.2.1 vs. uniprot
Match: D8LM04_ECTSI (CID domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM04_ECTSI) HSP 1 Score: 133 bits (334), Expect = 2.840e-32 Identity = 86/153 (56.21%), Postives = 102/153 (66.67%), Query Frame = 1
Query: 214 LARRDERAVRALYDD-LPLQCGQDGMRFRTQAALDRHLDALFQRNRARKEQERGGASRPWFCSREQWVTDFGAKRGGAASXXXXXXXXXXXXXXXEAAA-------AMASSVLADEHFQRCRLCGEPFDVFYDNDEEEWMYRNACYVEIEGSG 648
LAR + AVR LY + P C QDG RF QA LD H+D LF+R AR+EQ+ ASR W+C+ E+W+TDFG A SXXXXXXXXXXXXXXX S V ADE F +CR+CG+ F +FYDNDEEEWMYRNACYV ++G G
Sbjct: 343 LARGNPAAVRRLYGEGFPFWCKQDGTRFAKQAQLDAHMDLLFRRKHARREQKGVAASREWYCTDEEWMTDFGRLAPPAGSXXXXXXXXXXXXXXXXXXXXXXXXXDGSKSCVPADERFSKCRICGDRFLMFYDNDEEEWMYRNACYVTVKGGG 495
BLAST of mRNA_P-wetherbeei_contig15270.2.1 vs. uniprot
Match: F0W6S2_9STRA (Uncharacterized protein AlNc14C26G2558 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W6S2_9STRA) HSP 1 Score: 110 bits (274), Expect = 3.610e-24 Identity = 59/144 (40.97%), Postives = 84/144 (58.33%), Query Frame = 1
Query: 211 VLARRD--ERAVRALYDDLPLQCGQDGMRFRTQAALDRHLDALFQRNRARKEQERGGASRPWFCSREQWVTDFG----AKRGGAASXXXXXXXXXXXXXXXEAAAAMASS-VLADEHFQRCRLCGEPFDVFYDNDEEEWMYRNA 621
++A +D E ++ LY LPL C + G+RFR Q LD HLD LFQ NR+ KE+ +GG SR W+ ++EQW TDF A++ ++S + + ++ V DE +CR+CGEPF+ +D DEEEWMY NA
Sbjct: 452 IVAHKDRVESNIQKLYAALPLVCRESGVRFREQKKLDAHLDFLFQYNRSVKERGKGGISRAWYPNKEQWTTDFSTDHTARKNTSSSFFDQDSKKMQDDKEDQVLMELRNARVPVDESVTKCRICGEPFEKCWDEDEEEWMYINA 595
BLAST of mRNA_P-wetherbeei_contig15270.2.1 vs. uniprot
Match: A0A835ZEB3_9STRA (CID domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEB3_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.600e-22 Identity = 71/222 (31.98%), Postives = 88/222 (39.64%), Query Frame = 1
Query: 223 RDERAVRALYDDLPLQCGQDGMRFRTQAALDRHLDALF------------QRNRARKEQERGGASRPWFCSREQWVTDFGAKRG------------GAASXXXXXXXXXXXXXXXEAAAAM------------------------------------------------------------ASSVLADEHFQRCRLCGEPFDVFYDNDEEEWMYRNACYVEI 636
R E + L++ P C QDG RF TQAALD HLD LF QR R R+EQ A+RPW+C+ QWVTDFG+K GAA+ +AA + SV AD+ RCR+CGEPF++FYD DEEEWM+RNACY +
Sbjct: 626 RFEGPIFDLHEGRPYLCKQDGQRFLTQAALDAHLDLLFXXXXXXXXXXXXQRRRMRREQTTAAATRPWYCTMAQWVTDFGSKTADQKGRDAAAAQPGAAAAAGEQQPAGAPDAGADAAGDAFGGGAAEQVLSCGTVVQRASXXXXXXXXXXXXXXGISGSAXXXXXXXXXXXXSIGPVDYNSFSVPADDEQSRCRICGEPFEMFYDGDEEEWMFRNACYANL 847
BLAST of mRNA_P-wetherbeei_contig15270.2.1 vs. uniprot
Match: A0A2K1J7E1_PHYPA (CID domain-containing protein n=5 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1J7E1_PHYPA) HSP 1 Score: 95.5 bits (236), Expect = 4.830e-19 Identity = 55/153 (35.95%), Postives = 77/153 (50.33%), Query Frame = 1
Query: 190 GGLWHPLVLARRDERAVRALYDDLPLQCGQDGMRFRTQAALDRHLDALFQRNRARKEQERGGASRPWFCSREQWVTDFGAKRGGAASXXXXXXXXXXXXXXXEAAAAMASSVLADEHFQRCRLCGEPFDVFYDNDEEEWMYRNACYVEIEGSG 648
G + P VL R E + ALY+D P QC G+RF Q A +H+D RNR +K Q++ SR WF S ++W++ A AA E + +V AD + C LCGEPFD FY ++ +EWMY+ A Y+ + G
Sbjct: 1063 GTEFKPEVLRERHEVVIDALYNDFPRQCKTCGLRFLEQEAHSKHMDWHVSRNRRQKSQKK--VSRKWFVSEKEWLSGTVASSAEAAPSFFAAEVGAGAAKADEGESL---AVPADYNQSVCALCGEPFDDFYSDERDEWMYKGAVYMNVPAGG 1210
BLAST of mRNA_P-wetherbeei_contig15270.2.1 vs. uniprot
Match: A9TW14_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TW14_PHYPA) HSP 1 Score: 95.5 bits (236), Expect = 4.870e-19 Identity = 55/153 (35.95%), Postives = 77/153 (50.33%), Query Frame = 1
Query: 190 GGLWHPLVLARRDERAVRALYDDLPLQCGQDGMRFRTQAALDRHLDALFQRNRARKEQERGGASRPWFCSREQWVTDFGAKRGGAASXXXXXXXXXXXXXXXEAAAAMASSVLADEHFQRCRLCGEPFDVFYDNDEEEWMYRNACYVEIEGSG 648
G + P VL R E + ALY+D P QC G+RF Q A +H+D RNR +K Q++ SR WF S ++W++ A AA E + +V AD + C LCGEPFD FY ++ +EWMY+ A Y+ + G
Sbjct: 1081 GTEFKPEVLRERHEVVIDALYNDFPRQCKTCGLRFLEQEAHSKHMDWHVSRNRRQKSQKK--VSRKWFVSEKEWLSGTVASSAEAAPSFFAAEVGAGAAKADEGESL---AVPADYNQSVCALCGEPFDDFYSDERDEWMYKGAVYMNVPAGG 1228
BLAST of mRNA_P-wetherbeei_contig15270.2.1 vs. uniprot
Match: A0A1Q3DBW4_CEPFO (C2H2-type domain-containing protein (Fragment) n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3DBW4_CEPFO) HSP 1 Score: 89.0 bits (219), Expect = 7.260e-19 Identity = 47/138 (34.06%), Postives = 70/138 (50.72%), Query Frame = 1
Query: 223 RDERAVRALYDDLPLQCGQDGMRFRTQAALDRHLDALFQRNRARKEQERGGASRP--WFCSREQWVTDFGAKRGGAASXXXXXXXXXXXXXXXEAAAAMASSVLADEHFQRCRLCGEPFDVFYDNDEEEWMYRNACYV 630
R E + ALY DLP QC +RF+TQ +H+D RNR + Q++ G P WF S W+ GA + EAA + V+ADE+ + C LCGEPF+ F+ ++ ++WMY+ + Y+
Sbjct: 13 RHESLINALYTDLPRQCASCALRFKTQEEHSKHMDWHVARNRMIRNQKKQGQIMPRNWFASTSMWLI-------GAEALATEGVPMFFTNEKEEAAVEESLGVIADENQKICALCGEPFEDFFSDEVDDWMYKGSVYL 143
BLAST of mRNA_P-wetherbeei_contig15270.2.1 vs. uniprot
Match: A0A803M208_CHEQI (CID domain-containing protein n=3 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803M208_CHEQI) HSP 1 Score: 93.6 bits (231), Expect = 2.110e-18 Identity = 55/144 (38.19%), Postives = 74/144 (51.39%), Query Frame = 1
Query: 199 WHPLVLARRDERAVRALYDDLPLQCGQDGMRFRTQAALDRHLDALFQRNRARKEQERGGASRPWFCSREQWVTDFGAKRGGAASXXXXXXXXXXXXXXXEAAAAMASSVLADEHFQRCRLCGEPFDVFYDNDEEEWMYRNACYV 630
++P +L R E A+RALY+DLP QC G+RF+TQ +H+D +NR K ++ SR WF + W++ A AA E A V ADE C LCGEPF+ FY ++ EEWMYR A Y+
Sbjct: 748 FNPDLLKVRHESAIRALYEDLPRQCTTCGLRFKTQDEHSKHMDWHVTKNRISKNRKHN-PSRKWFVNVNMWLSGAEALGTDAAPGFLPTESVVEKKDDEEMA------VPADEDQNTCALCGEPFEDFYSDEAEEWMYRGAVYL 884
BLAST of mRNA_P-wetherbeei_contig15270.2.1 vs. uniprot
Match: A0A176WNN3_MARPO (C2H2-type domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WNN3_MARPO) HSP 1 Score: 93.6 bits (231), Expect = 2.200e-18 Identity = 52/142 (36.62%), Postives = 74/142 (52.11%), Query Frame = 1
Query: 211 VLARRDERAVRALYDDLPLQCGQDGMRFRTQAALDRHLDALFQRNRARKEQERGGASRPWFCSREQWVTDFGAKRGGAASXXXXXXXXXXXXXXXEAAAAMASSVLADEHFQRCRLCGEPFDVFYDNDEEEWMYRNACYVEI 636
+L R E + ALY D P QC G+RF+ Q +H+D RNR +K Q++ SR WF S ++W++ GA AAS E +A V DE+ C LCGEPF+ FY ++ +EWMY+ A Y+ +
Sbjct: 969 ILRERHEYVLEALYSDFPRQCKTCGLRFKAQDEHSKHMDWHVSRNRRQKSQKK--ISRKWFVSTKEWLSGTGA----AASEFAPSFFAEESGAKEENVEVVA--VPEDENQSACALCGEPFEDFYSDETDEWMYKGAVYLNV 1102
BLAST of mRNA_P-wetherbeei_contig15270.2.1 vs. uniprot
Match: A0A0K9RID7_SPIOL (CID domain-containing protein n=2 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9RID7_SPIOL) HSP 1 Score: 92.8 bits (229), Expect = 3.890e-18 Identity = 55/144 (38.19%), Postives = 76/144 (52.78%), Query Frame = 1
Query: 199 WHPLVLARRDERAVRALYDDLPLQCGQDGMRFRTQAALDRHLDALFQRNRARKEQERGGASRPWFCSREQWVTDFGAKRGGAASXXXXXXXXXXXXXXXEAAAAMASSVLADEHFQRCRLCGEPFDVFYDNDEEEWMYRNACYV 630
++P +L R E A+RALY++LP QC G+RF+TQ +H+D +NR K ++ SR WF S W++ GA+ G S + A V ADE C LCGEPF+ FY ++ EEWMYR A Y+
Sbjct: 746 FNPDLLKVRHESAIRALYEELPRQCTTCGLRFKTQDEHSKHMDWHVTKNRISKNRKHN-PSRKWFVSVNMWLS--GAEALGTDSAPGFLPTESVVEKKDDEEMA----VPADEDQNSCALCGEPFEDFYSDETEEWMYRGAVYL 882
BLAST of mRNA_P-wetherbeei_contig15270.2.1 vs. uniprot
Match: A0A7G2RM05_BETVV (CID domain-containing protein n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A7G2RM05_BETVV) HSP 1 Score: 92.8 bits (229), Expect = 3.910e-18 Identity = 55/144 (38.19%), Postives = 75/144 (52.08%), Query Frame = 1
Query: 199 WHPLVLARRDERAVRALYDDLPLQCGQDGMRFRTQAALDRHLDALFQRNRARKEQERGGASRPWFCSREQWVTDFGAKRGGAASXXXXXXXXXXXXXXXEAAAAMASSVLADEHFQRCRLCGEPFDVFYDNDEEEWMYRNACYV 630
++P +L R E A++ALYDDLP QC G+RF+TQ +H+D +NR K ++ SR WF S W++ GA+ G S + A V ADE C LCGEPF+ FY ++ EEWMYR Y+
Sbjct: 779 FNPDLLKVRHESAIKALYDDLPRQCTTCGLRFKTQEEHSKHMDWHVTKNRISKNRKHN-PSRKWFVSVSMWLS--GAEALGTDSAPGFLPTESADEKKDDEEMA----VPADEDQNVCALCGEPFEDFYSDETEEWMYRGTVYL 915 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15270.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15270.2.1 >prot_P-wetherbeei_contig15270.2.1 ID=prot_P-wetherbeei_contig15270.2.1|Name=mRNA_P-wetherbeei_contig15270.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=220bp LPSQVRAAADAGSRGDAAALLMLVTTAGQAAQVLASLLGLPAPAPSGIGAback to top mRNA from alignment at P-wetherbeei_contig15270:505..1374- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15270.2.1 ID=mRNA_P-wetherbeei_contig15270.2.1|Name=mRNA_P-wetherbeei_contig15270.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=870bp|location=Sequence derived from alignment at P-wetherbeei_contig15270:505..1374- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15270:505..1374- >mRNA_P-wetherbeei_contig15270.2.1 ID=mRNA_P-wetherbeei_contig15270.2.1|Name=mRNA_P-wetherbeei_contig15270.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=660bp|location=Sequence derived from alignment at P-wetherbeei_contig15270:505..1374- (Phaeothamnion wetherbeei SAG_119_79)back to top |