mRNA_P-wetherbeei_contig15264.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15264.1.2
Unique NamemRNA_P-wetherbeei_contig15264.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15264.1.2 vs. uniprot
Match: A0A1Y1VQF8_9FUNG (Ankyrin n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1VQF8_9FUNG)

HSP 1 Score: 103 bits (257), Expect = 1.180e-24
Identity = 46/91 (50.55%), Postives = 65/91 (71.43%), Query Frame = 3
Query:  138 MSEENIWTVAGDGILEKVKSYIVEG------CDINAKDSFGYTPIHAAAAYAQMGVLNWLIDNGANVNVIDADGDTPLHHCESVEPAQLLI 392
            +SE  +W VAG+G +EK+K Y+  G       DIN+KD FGYT +HAA +Y+++    WL+++GA+VN+ D DGDTPLH CESV  A++LI
Sbjct:    9 LSESTLWVVAGEGNIEKIKRYLEYGGQNNSKLDINSKDEFGYTALHAAVSYSRLEAARWLLEHGADVNITDDDGDTPLHSCESVAMAKMLI 99          
BLAST of mRNA_P-wetherbeei_contig15264.1.2 vs. uniprot
Match: A0A1X2GXH0_9FUNG (Ankyrin n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GXH0_9FUNG)

HSP 1 Score: 101 bits (252), Expect = 1.050e-23
Identity = 46/84 (54.76%), Postives = 61/84 (72.62%), Query Frame = 3
Query:  141 SEENIWTVAGDGILEKVKSYIVEGCDINAKDSFGYTPIHAAAAYAQMGVLNWLIDNGANVNVIDADGDTPLHHCESVEPAQLLI 392
            + +NIW  AGDG LE++K  + EG D N KD FGYTPIHAA +YAQ  VL  L+ +G ++NV DAD DTPL+ CE+VE A+ ++
Sbjct:    6 ANDNIWVAAGDGQLERIKVLLEEGVDPNGKDEFGYTPIHAAVSYAQKEVLECLLSHGGDINVEDADKDTPLYVCETVEMAKFML 89          
BLAST of mRNA_P-wetherbeei_contig15264.1.2 vs. uniprot
Match: A0A1B2JI20_PICPA (BA75_04719T0 n=4 Tax=Komagataella TaxID=460517 RepID=A0A1B2JI20_PICPA)

HSP 1 Score: 97.8 bits (242), Expect = 5.450e-22
Identity = 47/86 (54.65%), Postives = 61/86 (70.93%), Query Frame = 3
Query:  138 MSEENIWTVAGDGILEKVKSYIVE-GCDINAKDSFGYTPIHAAAAYAQMGVLNWLIDNGANVNVIDADGDTPLHHCESVEPAQLLI 392
            MS  NIW  A DG L KV++++ + G   N KD  GYTPIHAAAAY    ++ +LI+ GA++N+ D DGDTPLHH ES+E AQLL+
Sbjct:    1 MSSANIWVAASDGELAKVQNWVEKHGLSPNEKDPNGYTPIHAAAAYGHKELIRYLIEKGADINIQDQDGDTPLHHVESLEIAQLLV 86          
BLAST of mRNA_P-wetherbeei_contig15264.1.2 vs. uniprot
Match: A0A225VCY4_9STRA (Uncharacterized protein n=2 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VCY4_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 5.890e-22
Identity = 44/81 (54.32%), Postives = 60/81 (74.07%), Query Frame = 3
Query:  150 NIWTVAGDGILEKVKSYIVEGCDINAKDSFGYTPIHAAAAYAQMGVLNWLIDNGANVNVIDADGDTPLHHCESVEPAQLLI 392
            N+WT AGDG LE VK+++V G D+N KD  GYTP+ AA +Y  M ++ +L+ +GA+V + D D DTPLH CESVE A+LL+
Sbjct:    4 NVWTAAGDGDLESVKAFLVGGGDVNTKDENGYTPLQAAVSYNHMDLVVFLLASGADVKLGDDDMDTPLHRCESVECAKLLL 84          
BLAST of mRNA_P-wetherbeei_contig15264.1.2 vs. uniprot
Match: A0A1X2IEE6_9FUNG (Ankyrin repeat-containing domain protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IEE6_9FUNG)

HSP 1 Score: 96.3 bits (238), Expect = 1.600e-21
Identity = 42/84 (50.00%), Postives = 60/84 (71.43%), Query Frame = 3
Query:  141 SEENIWTVAGDGILEKVKSYIVEGCDINAKDSFGYTPIHAAAAYAQMGVLNWLIDNGANVNVIDADGDTPLHHCESVEPAQLLI 392
            S +NIW  AGDG LE++K  +  G + NAKD FGYTPIHAA +Y    +L++L++NG ++NV D D DTPL+ CE+ + A+ L+
Sbjct:    6 SNDNIWVAAGDGQLERLKELVEGGAEPNAKDDFGYTPIHAAVSYNHKEILDYLLNNGGDINVEDFDKDTPLYVCETTDMARFLL 89          
BLAST of mRNA_P-wetherbeei_contig15264.1.2 vs. uniprot
Match: A0A8H7EK38_9FUNG (Uncharacterized protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7EK38_9FUNG)

HSP 1 Score: 94.0 bits (232), Expect = 7.810e-21
Identity = 44/85 (51.76%), Postives = 59/85 (69.41%), Query Frame = 3
Query:  138 MSEENIWTVAGDGILEKVKSYIVEGCDINAKDSFGYTPIHAAAAYAQMGVLNWLIDNGANVNVIDADGDTPLHHCESVEPAQLLI 392
            MSE+NIW  AGDG L +VK  I  G D+N++D FGYT +HAA +Y Q  ++  L+  GA++N+ D+D DTPL   E VE AQLL+
Sbjct:    1 MSEDNIWIAAGDGQLARVKELIEGGVDVNSRDEFGYTAMHAAVSYNQEAMIKLLLQYGADINIEDSDKDTPLFVAEKVEIAQLLL 85          
BLAST of mRNA_P-wetherbeei_contig15264.1.2 vs. uniprot
Match: A0A0J0XX82_9TREE (Ankyrin n=1 Tax=Cutaneotrichosporon oleaginosum TaxID=879819 RepID=A0A0J0XX82_9TREE)

HSP 1 Score: 93.2 bits (230), Expect = 2.230e-20
Identity = 42/84 (50.00%), Postives = 60/84 (71.43%), Query Frame = 3
Query:  141 SEENIWTVAGDGILEKVKSYIVEGCDINAKDSFGYTPIHAAAAYAQMGVLNWLIDNGANVNVIDADGDTPLHHCESVEPAQLLI 392
            S++N+W  A DG LE+VK+ I  G   N +D+  YTP+HAAA+YA + +L +L+  G +VN+ D DGDTPL+ CESVE A+ L+
Sbjct:    5 SQKNLWVAASDGDLERVKTLIDAGASPNDRDAHSYTPMHAAASYAHLALLEYLVSVGGDVNLPDDDGDTPLYTCESVEAARWLV 88          
BLAST of mRNA_P-wetherbeei_contig15264.1.2 vs. uniprot
Match: A0A485LA06_9STRA (Aste57867_17919 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LA06_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 3.560e-20
Identity = 45/122 (36.89%), Postives = 71/122 (58.20%), Query Frame = 3
Query:  150 NIWTVAGDGILEKVKSYIVEGCDINAKDSFGYTPIHAAAAYAQMGVLNWLIDNGANVNVIDADGDTPLHHCESVEPAQLLIAXXXXXXXXXXXXXXXXXXXXXSESEELAAFLRE--AMASG 509
            N+W  A DG L+ VK+++  G  +NA+D  GYTP+ AA +Y+   ++++L+  GA+  + ++D +TPLH+CESVE AQ+L+                       E+EEL AFL    A++SG
Sbjct:    3 NVWIAASDGNLDAVKAFLAAGTPVNAQDENGYTPLQAAVSYSHADIVHYLLAAGASATLGNSDNETPLHYCESVECAQILLQHGADINATNAEQRTPLDAAIDDENEELCAFLESHGAVSSG 124          
BLAST of mRNA_P-wetherbeei_contig15264.1.2 vs. uniprot
Match: A0A1V9YL54_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YL54_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 4.250e-20
Identity = 47/126 (37.30%), Postives = 74/126 (58.73%), Query Frame = 3
Query:  138 MSEENIWTVAGDGILEKVKSYIVEGCDINAKDSFGYTPIHAAAAYAQMGVLNWLIDNGANVNVIDADGDTPLHHCESVEPAQLLIAXXXXXXXXXXXXXXXXXXXXXSESEELAAFL--REAMASG 509
            M+++NIW  A DG +E VK+Y+  G  ++A+D  GYTP+ AA +Y Q+ ++++L+  GA V++ D D +TPLH CES+E A++L+A                      E++EL  F   R A +SG
Sbjct:    1 MADKNIWVSASDGDIEAVKNYLEAGVSVDAQDENGYTPLQAAVSYNQVELVSFLLTKGATVSLGDNDDETPLHFCESIEVAEILLAAGANLNAKNAEGRTPLDAALDEENDELRDFYINRGAESSG 126          
BLAST of mRNA_P-wetherbeei_contig15264.1.2 vs. uniprot
Match: A0A168MLA3_ABSGL (Uncharacterized protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168MLA3_ABSGL)

HSP 1 Score: 92.0 bits (227), Expect = 6.760e-20
Identity = 39/84 (46.43%), Postives = 59/84 (70.24%), Query Frame = 3
Query:  141 SEENIWTVAGDGILEKVKSYIVEGCDINAKDSFGYTPIHAAAAYAQMGVLNWLIDNGANVNVIDADGDTPLHHCESVEPAQLLI 392
            S +N+W  AGDG L++VK  +  G  +NAKD  GYT IHAA +Y Q  +L++L++NG ++NV D D DTPL+ CE+ + A+ ++
Sbjct:    6 SNDNLWVAAGDGQLDRVKELVEGGAQVNAKDDNGYTAIHAAVSYNQKDILDYLLNNGGDINVEDFDKDTPLYVCETTDMAKFML 89          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15264.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Y1VQF8_9FUNG1.180e-2450.55Ankyrin n=1 Tax=Anaeromyces robustus TaxID=1754192... [more]
A0A1X2GXH0_9FUNG1.050e-2354.76Ankyrin n=1 Tax=Hesseltinella vesiculosa TaxID=101... [more]
A0A1B2JI20_PICPA5.450e-2254.65BA75_04719T0 n=4 Tax=Komagataella TaxID=460517 Rep... [more]
A0A225VCY4_9STRA5.890e-2254.32Uncharacterized protein n=2 Tax=Phytophthora megak... [more]
A0A1X2IEE6_9FUNG1.600e-2150.00Ankyrin repeat-containing domain protein n=1 Tax=A... [more]
A0A8H7EK38_9FUNG7.810e-2151.76Uncharacterized protein n=1 Tax=Apophysomyces ossi... [more]
A0A0J0XX82_9TREE2.230e-2050.00Ankyrin n=1 Tax=Cutaneotrichosporon oleaginosum Ta... [more]
A0A485LA06_9STRA3.560e-2036.89Aste57867_17919 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9YL54_9STRA4.250e-2037.30Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A168MLA3_ABSGL6.760e-2046.43Uncharacterized protein n=1 Tax=Absidia glauca Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15264contigP-wetherbeei_contig15264:381..1600 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog4922.CAY71865
PFAMsAnk_2,Ank_4,Ank_5
Model size533
Max annot lvl4751|Fungi
KEGG koko:K06867
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464
Exons5
Evalue2.86e-23
EggNOG OGsCOG0666@1|root,KOG0504@2759|Eukaryota,3A6XG@33154|Opisthokonta,3P5JB@4751|Fungi,3QUGY@4890|Ascomycota,3RUW7@4891|Saccharomycetes
DescriptionSaccharomyces cerevisiae YCR051W
Cds size396
COG categoryS
BRITEko00000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15264.1.2prot_P-wetherbeei_contig15264.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15264 381..1463 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186050.3174863-CDS-P-wetherbeei_contig15264:380..4211683186050.3174863-CDS-P-wetherbeei_contig15264:380..421Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15264 381..421 -
1683186050.3360455-CDS-P-wetherbeei_contig15264:608..6631683186050.3360455-CDS-P-wetherbeei_contig15264:608..663Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15264 609..663 -
1683186050.3471997-CDS-P-wetherbeei_contig15264:856..9101683186050.3471997-CDS-P-wetherbeei_contig15264:856..910Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15264 857..910 -
1683186050.359527-CDS-P-wetherbeei_contig15264:1089..12191683186050.359527-CDS-P-wetherbeei_contig15264:1089..1219Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15264 1090..1219 -
1683186050.3690736-CDS-P-wetherbeei_contig15264:1347..14631683186050.3690736-CDS-P-wetherbeei_contig15264:1347..1463Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15264 1348..1463 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186050.3792367-UTR-P-wetherbeei_contig15264:1463..16001683186050.3792367-UTR-P-wetherbeei_contig15264:1463..1600Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig15264 1464..1600 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15264.1.2

>prot_P-wetherbeei_contig15264.1.2 ID=prot_P-wetherbeei_contig15264.1.2|Name=mRNA_P-wetherbeei_contig15264.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=132bp
MSEENIWTVAGDGILEKVKSYIVEGCDINAKDSFGYTPIHAAAAYAQMGV
LNWLIDNGANVNVIDADGDTPLHHCESVEPAQLLIAKGANVYQQNAAGET
PLSSAEESESEELAAFLREAMASGRSVGAVP*
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mRNA from alignment at P-wetherbeei_contig15264:381..1600-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15264.1.2 ID=mRNA_P-wetherbeei_contig15264.1.2|Name=mRNA_P-wetherbeei_contig15264.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1220bp|location=Sequence derived from alignment at P-wetherbeei_contig15264:381..1600- (Phaeothamnion wetherbeei SAG_119_79)
CATAAGCCAGCCTGTGGTCGATCGAGACCTCAAGGCCTCGAGACTCGACT CGAAGTCGAGTACTCGACCCACGAGACCCATCCCTAACGGGAAAGAAGAA AACGGACGAAGGACTTCCGCCGCCCGCCCTCTAGAAAATGAGCGAGGAAA ATATCTGGACCGTCGCGGGCGATGGGATCCTGGAAAAGGTGAAGAGCTAC ATTGTTGAAGGGTGCGACATCAACGCGAAGGATTCGTTCGGCTACACGCC AATGTGAGTAGTAAGATGCGATGAAAAGCACCAAGGGACACCCTCCCTCT CTAGCGGATGATTTTTCTCCAACTTCCTTTACATTCTCTTTCATATGGCT CCTTCGCCTTCCAAATGTTTATCTCCCGCAGTCACGCCGCGGCGGCCTAT GCGCAAATGGGTGTGTTGAATTGGCTCATCGATAACGGCGCCAACGTCAA CGTTATTGACGCCGACGGCGACACTCCATTGCACCACTGCGAAAGCGTCG AGCCCGCCCAGGTAAAGATATCAGAGGACAACAGGCGGATCCTCCGTTTA TGCGACCTTGAATCTTGTTACTATTGGGGGAGCAGGTGGAAGTTGGCCTG AATGTACTGCTTTGACGCTTTTCCTTGCCCTTTCTGATTCCTCGATCTCC CTCTGCCCCTTTTCTGGTCTCAACTTTGCTGCTGCTGCAGTTATTGATTG CGAAAGGCGCGAACGTTTACCAGCAGAACGCGGCAGGAGAAACAGTGCGT GGAAATCTTCCATGGAGACGGTTTTTATTCGCTCACAAATTTTGTGTCCG GCGCCTGCTCTTGCGCGATAAAGCTTCTTGCACTCATGGCTTCTACTTCT AGTAGGCCAAATCTGCACGCGCTCTCTCTTGCTTCCTTTACATTGTCCCT TATCTTGTTACGCCGCATTCCTTCTTCGGCGTCACAGCCGCTCTCGTCGG CGGAAGAATCCGAGAGCGAGGAGCTCGCCGCCTTCTTAAGAGGTTCGGAC GACTTCAGCAGTACGGGCGGAAGCTTGTTGGATGCGGCCAAGTTCTTTTG TCTTAAGATGCATTTGTGGAAAATGCAGCTTGGCATGGCCGTTTTTGTTG AGGGGCGAAGAGCCTGCCTTATATGAAGGCATTTATTGCTTTGTTGTCAC CCGTTATTTTGCTTCTTCCTTCGCTGCAGAAGCCATGGCGTCTGGCCGCA GCGTCGGCGCGGTCCCATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15264:381..1600-

>mRNA_P-wetherbeei_contig15264.1.2 ID=mRNA_P-wetherbeei_contig15264.1.2|Name=mRNA_P-wetherbeei_contig15264.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=396bp|location=Sequence derived from alignment at P-wetherbeei_contig15264:381..1600- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCGAGGAAAATATCTGGACCGTCGCGGGCGATGGGATCCTGGAAAA
GGTGAAGAGCTACATTGTTGAAGGGTGCGACATCAACGCGAAGGATTCGT
TCGGCTACACGCCAATTCACGCCGCGGCGGCCTATGCGCAAATGGGTGTG
TTGAATTGGCTCATCGATAACGGCGCCAACGTCAACGTTATTGACGCCGA
CGGCGACACTCCATTGCACCACTGCGAAAGCGTCGAGCCCGCCCAGTTAT
TGATTGCGAAAGGCGCGAACGTTTACCAGCAGAACGCGGCAGGAGAAACA
CCGCTCTCGTCGGCGGAAGAATCCGAGAGCGAGGAGCTCGCCGCCTTCTT
AAGAGAAGCCATGGCGTCTGGCCGCAGCGTCGGCGCGGTCCCATGA
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