mRNA_P-wetherbeei_contig15250.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15250.2.1
Unique NamemRNA_P-wetherbeei_contig15250.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15250.2.1 vs. uniprot
Match: A0A351T2P7_9PROT (ATP synthase protein I n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T2P7_9PROT)

HSP 1 Score: 107 bits (266), Expect = 6.040e-28
Identity = 59/97 (60.82%), Postives = 69/97 (71.13%), Query Frame = 1
Query:    1 MTDEPKPSSDGSFEARLEAARRANAPQPAHGAQGGAMGTAFRLSADLVSAVVAGGGLGWGLDWLFGTGPWLLLLFFFLGIAAGILNVIRTANEMNAA 291
            M D+ + +    F+ARL AARRA  P      +G AMG A RLS DLV+AV  GG LGW LD   GT PWLLLLFFFLG+AAGI+NV+RTAN+MNAA
Sbjct:    1 MDDDQQSTPRSDFDARLAAARRAIQPVAQDARRGSAMGVAIRLSTDLVAAVAVGGFLGWLLDRWLGTSPWLLLLFFFLGVAAGIMNVVRTANQMNAA 97          
BLAST of mRNA_P-wetherbeei_contig15250.2.1 vs. uniprot
Match: A0A3C0TW46_9PROT (ATP F0F1 synthase subunit I (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TW46_9PROT)

HSP 1 Score: 96.7 bits (239), Expect = 1.950e-24
Identity = 48/53 (90.57%), Postives = 49/53 (92.45%), Query Frame = 1
Query:  139 LVSAVVAGGGLGWGLDWLFGTGPWLLLLFFFLGIAAGILNVIRTANEMNAAQQ 297
            LVSAVVAGG +GWGLDWLFGTGPWLLLLFFFLGIAAGI NVIRTA EMNAA Q
Sbjct:    1 LVSAVVAGGVIGWGLDWLFGTGPWLLLLFFFLGIAAGIRNVIRTAREMNAAAQ 53          
BLAST of mRNA_P-wetherbeei_contig15250.2.1 vs. uniprot
Match: A0A523FXG9_9PROT (ATP synthase protein I n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A523FXG9_9PROT)

HSP 1 Score: 88.6 bits (218), Expect = 1.300e-20
Identity = 50/97 (51.55%), Postives = 61/97 (62.89%), Query Frame = 1
Query:   13 PKPSSDGSFEARLEAARRANAPQPAHGAQGGAMGTAFRLSADLVSAVVAGGGLGWGLDWLFGTGPWLLLLFFFLGIAAGILNVIRTANEMNAAQQTD 303
            PKPS+    + RL  AR       +   +G A+G AFRL  +LV+ VV GG +GW LD+ FGT PW LL+FF LG  AGILNV+RTA  MNA Q  D
Sbjct:    9 PKPSALKDLDQRLRQARGTEEQFDSSEQRGNALGLAFRLVTELVAGVVVGGVIGWSLDFWFGTTPWFLLIFFALGSLAGILNVVRTAQVMNAKQALD 105          
BLAST of mRNA_P-wetherbeei_contig15250.2.1 vs. uniprot
Match: A0A2E5BP29_9HYPH (ATP F0F1 synthase subunit I n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2E5BP29_9HYPH)

HSP 1 Score: 84.3 bits (207), Expect = 8.200e-19
Identity = 47/89 (52.81%), Postives = 63/89 (70.79%), Query Frame = 1
Query:   28 DGSFEARLEAARRANAPQPAH-GAQGGAMGTAFRLSADLVSAVVAGGGLGWGLDWLFGTGPWLLLLFFFLGIAAGILNVIRTANEMNAA 291
            D    A ++A +R N P+PA  G +  A+G AFRLS +LV+ ++AGG +GW LD + GT PW LL+FFFLG+ AGI+NV RTA+ M AA
Sbjct:   30 DAKIRAHVDAHKRKN-PEPAETGKRATAIGMAFRLSTELVAGLIAGGIVGWALDHVLGTKPWGLLIFFFLGMTAGIMNVFRTASAMAAA 117          
BLAST of mRNA_P-wetherbeei_contig15250.2.1 vs. uniprot
Match: A0A845QDX5_9HYPH (ATP synthase protein I n=1 Tax=Pyruvatibacter mobilis TaxID=1712261 RepID=A0A845QDX5_9HYPH)

HSP 1 Score: 81.6 bits (200), Expect = 3.830e-18
Identity = 50/96 (52.08%), Postives = 61/96 (63.54%), Query Frame = 1
Query:    1 MTDEPKPSSDGSFEARLEAARRANAPQPAHGAQGGAMGTAFRLSADLVSAVVAGGGLGWGLDWLFGTGPWLLLLFFFLGIAAGILNVIRTANEMNA 288
            MT+  K   D  F+ RL  AR   A       Q  A G AFRLS+++V+ V+ GG +GW LD   GT PWLLL+FFFLG+AAGILN +R A EMNA
Sbjct:    1 MTEPDKSRED--FDRRLTQARNRRADGGQTNRQT-AFGQAFRLSSEMVAGVLVGGFIGWTLDKWLGTTPWLLLVFFFLGVAAGILNAVRAAREMNA 93          
BLAST of mRNA_P-wetherbeei_contig15250.2.1 vs. uniprot
Match: A0A2D7FFR7_9HYPH (ATP F0F1 synthase subunit I n=2 Tax=Hyphomicrobiaceae TaxID=45401 RepID=A0A2D7FFR7_9HYPH)

HSP 1 Score: 82.0 bits (201), Expect = 6.770e-18
Identity = 45/85 (52.94%), Postives = 56/85 (65.88%), Query Frame = 1
Query:   46 RLEAARRANAPQPAHGAQGGAMGTAFRLSADLVSAVVAGGGLGWGLDWLFGT-GPWLLLLFFFLGIAAGILNVIRTANEMNAAQQ 297
            RLEA +    P P + A+G AM   F+++ +LV  VV GG LGWGLD  F T GPW L++F  LG AAG+LNVIRTA  M AA +
Sbjct:   33 RLEAVKTRREPPPDNSARGXAMAQGFKIAVELVVGVVFGGXLGWGLDRYFETSGPWFLIVFVMLGFAAGMLNVIRTAQRMQAAAE 117          
BLAST of mRNA_P-wetherbeei_contig15250.2.1 vs. uniprot
Match: A0A2D8XB25_9HYPH (ATP synthase protein I n=1 Tax=Parvibaculum sp. TaxID=2024848 RepID=A0A2D8XB25_9HYPH)

HSP 1 Score: 81.6 bits (200), Expect = 8.440e-18
Identity = 48/88 (54.55%), Postives = 62/88 (70.45%), Query Frame = 1
Query:   28 DGSFEARLEAARRANAPQPAH-GAQGGAMGTAFRLSADLVSAVVAGGGLGWGLDWLFGTGPWLLLLFFFLGIAAGILNVIRTANEMNA 288
            D    A  EA R+ N P+PA  G +  A+G AFRLS ++V+ +VAGG +GW +D L GT PW LL FFFLG+AAGILNV RTA+++ A
Sbjct:   26 DAKIRAHTEAHRQKN-PEPAETGRRSTAIGMAFRLSTEMVAGLVAGGIIGWVVDDLLGTKPWGLLTFFFLGMAAGILNVFRTAHKLAA 112          
BLAST of mRNA_P-wetherbeei_contig15250.2.1 vs. uniprot
Match: A0A2Z4UFJ3_9HYPH (ATP synthase protein I n=2 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2Z4UFJ3_9HYPH)

HSP 1 Score: 81.3 bits (199), Expect = 1.200e-17
Identity = 50/93 (53.76%), Postives = 64/93 (68.82%), Query Frame = 1
Query:   28 DGSFEARLEAARRANAPQPAH-GAQGGAMGTAFRLSADLVSAVVAGGGLGWGLDWLFGTGPWLLLLFFFLGIAAGILNVIRTANEM--NAAQQ 297
            D    A  EA R+ N P+PA  G +  A+G AFRLS ++V+ +VAGG +GW  D L GT PW LL FFFLG+AAGILNV RTA ++  +AA+Q
Sbjct:   26 DAKIRAHTEAHRQKN-PEPAETGRRSTAIGMAFRLSTEMVAGLVAGGVIGWIFDDLLGTKPWGLLTFFFLGMAAGILNVFRTAQKLAADAAEQ 117          
BLAST of mRNA_P-wetherbeei_contig15250.2.1 vs. uniprot
Match: A0A2E1MRU9_9HYPH (ATP synthase protein I n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2E1MRU9_9HYPH)

HSP 1 Score: 80.1 bits (196), Expect = 2.180e-17
Identity = 38/63 (60.32%), Postives = 48/63 (76.19%), Query Frame = 1
Query:   97 QGGAMGTAFRLSADLVSAVVAGGGLGWGLDWLFGTGPWLLLLFFFLGIAAGILNVIRTANEMN 285
            +G ++G AFRLS +LVS +V GG +GW +D   GT PW LL+FF LGIAAGI+NVI+TA  MN
Sbjct:   46 RGNSLGLAFRLSTELVSGIVVGGVMGWSIDKWLGTQPWFLLIFFILGIAAGIINVIKTAKNMN 108          
BLAST of mRNA_P-wetherbeei_contig15250.2.1 vs. uniprot
Match: A0A2N3ECD7_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-12 TaxID=2013658 RepID=A0A2N3ECD7_9PROT)

HSP 1 Score: 77.0 bits (188), Expect = 1.270e-16
Identity = 37/65 (56.92%), Postives = 48/65 (73.85%), Query Frame = 1
Query:  109 MGTAFRLSADLVSAVVAGGGLGWGLDWLFGTGPWLLLLFFFLGIAAGILNVIRTANEMNAAQQTD 303
            MG AFRL+ +LV+ V  GG +GW LD   GT PWL+L+FFF+G+AAGILNV R A +++AA   D
Sbjct:    1 MGIAFRLTTELVAGVFVGGFIGWALDRWLGTTPWLMLVFFFIGVAAGILNVYRAAQQISAAAGRD 65          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15250.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A351T2P7_9PROT6.040e-2860.82ATP synthase protein I n=2 Tax=Alphaproteobacteria... [more]
A0A3C0TW46_9PROT1.950e-2490.57ATP F0F1 synthase subunit I (Fragment) n=1 Tax=Alp... [more]
A0A523FXG9_9PROT1.300e-2051.55ATP synthase protein I n=1 Tax=Alphaproteobacteria... [more]
A0A2E5BP29_9HYPH8.200e-1952.81ATP F0F1 synthase subunit I n=1 Tax=Rhodobiaceae b... [more]
A0A845QDX5_9HYPH3.830e-1852.08ATP synthase protein I n=1 Tax=Pyruvatibacter mobi... [more]
A0A2D7FFR7_9HYPH6.770e-1852.94ATP F0F1 synthase subunit I n=2 Tax=Hyphomicrobiac... [more]
A0A2D8XB25_9HYPH8.440e-1854.55ATP synthase protein I n=1 Tax=Parvibaculum sp. Ta... [more]
A0A2Z4UFJ3_9HYPH1.200e-1753.76ATP synthase protein I n=2 Tax=Rhodobiaceae bacter... [more]
A0A2E1MRU9_9HYPH2.180e-1760.32ATP synthase protein I n=1 Tax=Rhodobiaceae bacter... [more]
A0A2N3ECD7_9PROT1.270e-1656.92Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15250contigP-wetherbeei_contig15250:1320..1622 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1282876.BAOK01000001_gene2896
Preferred nameatpI
PFAMsATPase_gene1
Model size303
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K02116
KEGG TC3.A.2.1
Hectar predicted targeting categorysignal anchor
Exons1
Evalue3.93e-18
EggNOG OGsCOG5336@1|root,COG5336@2|Bacteria,1NHIS@1224|Proteobacteria,2UFJJ@28211|Alphaproteobacteria,4BR0U@82117|unclassified Alphaproteobacteria
Descriptionfunction for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex
Cds size303
COG categoryS
BRITEko00000,ko00194
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186049.7137418-CDS-P-wetherbeei_contig15250:1319..16221683186049.7137418-CDS-P-wetherbeei_contig15250:1319..1622Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15250 1320..1622 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15250.2.1prot_P-wetherbeei_contig15250.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15250 1320..1622 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15250.2.1

>prot_P-wetherbeei_contig15250.2.1 ID=prot_P-wetherbeei_contig15250.2.1|Name=mRNA_P-wetherbeei_contig15250.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=101bp
MTDEPKPSSDGSFEARLEAARRANAPQPAHGAQGGAMGTAFRLSADLVSA
VVAGGGLGWGLDWLFGTGPWLLLLFFFLGIAAGILNVIRTANEMNAAQQT
D
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mRNA from alignment at P-wetherbeei_contig15250:1320..1622+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15250.2.1 ID=mRNA_P-wetherbeei_contig15250.2.1|Name=mRNA_P-wetherbeei_contig15250.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=303bp|location=Sequence derived from alignment at P-wetherbeei_contig15250:1320..1622+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACTGATGAACCAAAGCCCTCGTCCGATGGCAGTTTTGAGGCCCGGCT GGAAGCAGCAAGGCGCGCCAATGCGCCGCAACCGGCACATGGTGCACAGG GTGGCGCCATGGGAACGGCATTCCGGCTGAGCGCCGATCTGGTTTCCGCC GTGGTGGCGGGGGGCGGGCTGGGATGGGGTCTGGACTGGCTGTTCGGGAC GGGTCCGTGGTTATTGCTGCTGTTCTTCTTTTTGGGGATCGCAGCGGGGA TATTAAATGTTATACGCACGGCGAATGAAATGAACGCCGCGCAACAGACG GAT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15250:1320..1622+

>mRNA_P-wetherbeei_contig15250.2.1 ID=mRNA_P-wetherbeei_contig15250.2.1|Name=mRNA_P-wetherbeei_contig15250.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=303bp|location=Sequence derived from alignment at P-wetherbeei_contig15250:1320..1622+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACTGATGAACCAAAGCCCTCGTCCGATGGCAGTTTTGAGGCCCGGCT
GGAAGCAGCAAGGCGCGCCAATGCGCCGCAACCGGCACATGGTGCACAGG
GTGGCGCCATGGGAACGGCATTCCGGCTGAGCGCCGATCTGGTTTCCGCC
GTGGTGGCGGGGGGCGGGCTGGGATGGGGTCTGGACTGGCTGTTCGGGAC
GGGTCCGTGGTTATTGCTGCTGTTCTTCTTTTTGGGGATCGCAGCGGGGA
TATTAAATGTTATACGCACGGCGAATGAAATGAACGCCGCGCAACAGACG
GAT
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