mRNA_P-wetherbeei_contig15250.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15250.1.1
Unique NamemRNA_P-wetherbeei_contig15250.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15250.1.1 vs. uniprot
Match: A0A353LUE8_9PROT (NAD(+) diphosphatase n=5 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LUE8_9PROT)

HSP 1 Score: 380 bits (977), Expect = 9.360e-131
Identity = 183/244 (75.00%), Postives = 209/244 (85.66%), Query Frame = 1
Query:    1 NMFADALAGGATVLFLGLDKKDRAYFAVDLPGDTDPSKTGALKGFGEFGDLRGLAMNIDAHDAAIAAQAKAVLKWHSTHKFCSACGAPSVIAEGGYRRDCPQCKTQHFPRTDPVVIMLATLGDKALLGRQKIFPKGMYSALAGFVEPGESIEEAVARELFEEAACRVSSVTYRFTQPWPYPMSLMIGCTAVADSDAIQVDGIELEEAVWVSRADLRDALEGKGNGKVMIPPPFAIAHQLVRQFV 732
             MFAD++A GATVLFLGLD K+R YFA+DL  + DPS+ GALKGFGEF DLR +A  I A DAAIAAQAKA+LKWHSTH+FCSACG  SVIAE GYRRDCP+C+TQHFPRTDPVVIMLAT GDKALLGRQ+I+PK M+SALAGFVEPGESIEEAVAREL EEA C+VS+V Y  TQPWPYPMSLMIGCTA AD++ I+ DGIE+ EA W SRA+LRD L GKG+G + +PPPFAIAHQL+R +V
Sbjct:   67 GMFADSIAKGATVLFLGLDHKERPYFAIDLSAEPDPSQEGALKGFGEFTDLRSIAPQIAAADAAIAAQAKAILKWHSTHQFCSACGEKSVIAEAGYRRDCPKCETQHFPRTDPVVIMLATHGDKALLGRQEIWPKAMFSALAGFVEPGESIEEAVARELLEEAGCKVSTVRYHSTQPWPYPMSLMIGCTAEADNEDIEPDGIEIAEARWCSRAELRDVLAGKGDGSLFVPPPFAIAHQLIRSWV 310          
BLAST of mRNA_P-wetherbeei_contig15250.1.1 vs. uniprot
Match: A0A3C0TSZ4_9PROT (NAD(+) diphosphatase (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TSZ4_9PROT)

HSP 1 Score: 322 bits (824), Expect = 1.900e-108
Identity = 158/184 (85.87%), Postives = 167/184 (90.76%), Query Frame = 1
Query:    1 NMFADALAGGATVLFLGLDKKDRAYFAVDLPGD-TDPSKTGALKGFGEFGDLRGLAMNIDAHDAAIAAQAKAVLKWHSTHKFCSACGAPSVIAEGGYRRDCPQCKTQHFPRTDPVVIMLATLGDKALLGRQKIFPKGMYSALAGFVEPGESIEEAVARELFEEAACRVSSVTYRFTQPWPYPMS 549
            +MFA+A   GATV+FLGLDKK+RAYFAVDL     DPS++G LKGFGEFGDLRGLAM IDA DA+IAAQAKAVLKWHSTHKFCSACGAPSVIAEGGYRRDCP+C  QHFPRTDPVVIMLA  GDKALLGRQKIFPK MYSALAGFVEPGESIEEAVARELFEEA+CRVS VTYRFTQPWPYPMS
Sbjct:   67 DMFAEAYKNGATVMFLGLDKKNRAYFAVDLTDQGPDPSQSGPLKGFGEFGDLRGLAMTIDASDASIAAQAKAVLKWHSTHKFCSACGAPSVIAEGGYRRDCPKCHVQHFPRTDPVVIMLAVHGDKALLGRQKIFPKSMYSALAGFVEPGESIEEAVARELFEEASCRVSQVTYRFTQPWPYPMS 250          
BLAST of mRNA_P-wetherbeei_contig15250.1.1 vs. uniprot
Match: A0A2E1EIV4_9HYPH (NAD(+) diphosphatase n=4 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2E1EIV4_9HYPH)

HSP 1 Score: 302 bits (774), Expect = 7.890e-100
Identity = 150/242 (61.98%), Postives = 177/242 (73.14%), Query Frame = 1
Query:   19 LAGGATVLFLGLDKKDRAYFAVDLPGDTDPSKTGALKGFGEFGDLRGLAM--NIDAHDAAIAAQAKAVLKWHSTHKFCSACGAPSVIAEGGYRRDCPQCKTQHFPRTDPVVIMLATLGDKALLGRQKIFPKGMYSALAGFVEPGESIEEAVARELFEEAACRVSSVTYRFTQPWPYPMSLMIGCTAVADSDAIQVDGIELEEAVWVSRADLRDALEGKGNGKVMIPPPFAIAHQLVRQFVYG 738
            LAG    +FLG++K+ +A FA D+    D     ALKG G F DLRGLAM   I   + AI AQAK+++ WHS H FCS CG  S +AE GY+R CP CK +HFPRTDPVVIMLA  G+K  LGRQKI+PKGM+SALAGFVEPGESIEEAVAREL EEA  +VSSV+Y  TQPWPYP SLMIGC AVADS+A +VDGIEL E  W +R + +  L+GKG+G    PPPFAIAHQL++ F  G
Sbjct:   77 LAGDGCTVFLGINKRGKALFAADVSDTKDAENHPALKGQGAFEDLRGLAMAGEITPTELAIMAQAKSMIDWHSRHGFCSVCGHKSEMAEAGYKRQCPSCKAEHFPRTDPVVIMLAVHGEKCFLGRQKIWPKGMHSALAGFVEPGESIEEAVARELDEEAGLKVSSVSYHSTQPWPYPSSLMIGCHAVADSEAFEVDGIELSEGRWFTRDEAKAILDGKGDGTAWFPPPFAIAHQLIKAFAEG 318          
BLAST of mRNA_P-wetherbeei_contig15250.1.1 vs. uniprot
Match: A7HPP4_PARL1 (NAD(+) diphosphatase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) TaxID=402881 RepID=A7HPP4_PARL1)

HSP 1 Score: 301 bits (772), Expect = 1.540e-99
Identity = 149/242 (61.57%), Postives = 174/242 (71.90%), Query Frame = 1
Query:   19 LAGGATVLFLGLDKKDRAYFAVDLPGDTDPSKTGALKGFGEFGDLRGLAM--NIDAHDAAIAAQAKAVLKWHSTHKFCSACGAPSVIAEGGYRRDCPQCKTQHFPRTDPVVIMLATLGDKALLGRQKIFPKGMYSALAGFVEPGESIEEAVARELFEEAACRVSSVTYRFTQPWPYPMSLMIGCTAVADSDAIQVDGIELEEAVWVSRADLRDALEGKGNGKVMIPPPFAIAHQLVRQFVYG 738
            LAG   V+FLG++K+ +A FA D+    D     ALKG G F DLRGLAM   I   + AI AQAK+++ WHS H FCS CG  S +AE GY+R CP CK +HFPRTDPVVIMLAT  DK  LGRQKI+PKGM+SALAGFVEPGESIEEAVAREL EEA   V +VTY  TQPWPYP SLMIGC A+ADS+   +DGIEL E  W +RA+ +  L GKG+G    PPPFAIAHQL++ F  G
Sbjct:   77 LAGEGIVVFLGINKRGKALFAADVSALKDAENHPALKGLGSFEDLRGLAMAGEITPTELAIMAQAKSMIDWHSRHGFCSVCGTKSEMAEAGYKRQCPSCKAEHFPRTDPVVIMLATFEDKCFLGRQKIWPKGMHSALAGFVEPGESIEEAVARELHEEAGLSVGAVTYHSTQPWPYPSSLMIGCHAIADSEDFTIDGIELSEGRWFTRAEAQAILAGKGDGTAWFPPPFAIAHQLIKAFAEG 318          
BLAST of mRNA_P-wetherbeei_contig15250.1.1 vs. uniprot
Match: A0A2N3BYJ8_9PROT (NAD(+) diphosphatase n=2 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A2N3BYJ8_9PROT)

HSP 1 Score: 298 bits (763), Expect = 3.120e-98
Identity = 147/242 (60.74%), Postives = 177/242 (73.14%), Query Frame = 1
Query:   19 LAGGATVLFLGLDKKDRAYFAVDLPGDTDPSKTGALKGFGEFGDLRGLAM--NIDAHDAAIAAQAKAVLKWHSTHKFCSACGAPSVIAEGGYRRDCPQCKTQHFPRTDPVVIMLATLGDKALLGRQKIFPKGMYSALAGFVEPGESIEEAVARELFEEAACRVSSVTYRFTQPWPYPMSLMIGCTAVADSDAIQVDGIELEEAVWVSRADLRDALEGKGNGKVMIPPPFAIAHQLVRQFVYG 738
            LAG   V+FLG++++ +A FA D+ G  DP    ALKG G F DLR +AM   I   + AI AQAK+++ WH+ H FCS CGA S +AE GY+R CP CK +HFPRTDPVVIMLA    K  LGRQKI+PKGM+SALAGFVEPGESIEEAVAREL EEA+ +VSSVTY  TQPWPYP SLMIGC A+ADS+  ++DGIEL    W +R +++  L GKG+G    PPPFAIAHQLV+ F  G
Sbjct:   72 LAGEGCVVFLGINRRGKALFAADVSGLKDPENHPALKGLGAFEDLRAIAMAGEITPAELAIMAQAKSMIDWHNRHGFCSVCGARSEMAEAGYKRQCPSCKAEHFPRTDPVVIMLAIHDGKCFLGRQKIWPKGMHSALAGFVEPGESIEEAVARELGEEASIKVSSVTYHSTQPWPYPSSLMIGCHAIADSEDFEIDGIELSGGRWFTREEMQAILAGKGDGTAWFPPPFAIAHQLVKAFAEG 313          
BLAST of mRNA_P-wetherbeei_contig15250.1.1 vs. uniprot
Match: A0A081BB97_9HYPH (NAD(+) diphosphatase n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BB97_9HYPH)

HSP 1 Score: 296 bits (759), Expect = 1.220e-97
Identity = 148/245 (60.41%), Postives = 180/245 (73.47%), Query Frame = 1
Query:   13 DALAG-GATVLFLGLDKKDRAYFAVDLPGDTDPSKTGALKGFGEFGDLRGLAMN--IDAHDAAIAAQAKAVLKWHSTHKFCSACGAPSVIAEGGYRRDCPQCKTQHFPRTDPVVIMLATLGDKALLGRQKIFPKGMYSALAGFVEPGESIEEAVARELFEEAACRVSSVTYRFTQPWPYPMSLMIGCTAVADSDAIQVDGIELEEAVWVSRADLRDALEGKGNGKVMIPPPFAIAHQLVRQFVYG 738
            + LAG GA  +FLG++++ +A FA+D+    +P   G LKGFG F ++RGLAM   I A + AI AQAKA++ WH  H FCSACGA + +AE GY+R CP C  +HFPRTDPVVIM+AT GDKA LGRQKIFPKGMYSALAGF+EPGESIEEAVAREL EEA   V SV Y  TQPWP+P SLMIGC A A+S+  ++DG+EL    W +R +L  AL G+G G   +PPPFAIAH LV+ FV G
Sbjct:   70 EPLAGPGAIEVFLGINRRGKALFAIDISAARNPEAEGPLKGFGAFEEIRGLAMKGEITASELAILAQAKAMIDWHLRHGFCSACGAKTELAEAGYKRTCPSCHAEHFPRTDPVVIMMATHGDKAFLGRQKIFPKGMYSALAGFMEPGESIEEAVARELDEEAKIAVKSVRYHSTQPWPFPSSLMIGCIAEAESEDFEIDGVELSGGKWFTRDELAAALRGEGQG-FFVPPPFAIAHHLVKAFVEG 313          
BLAST of mRNA_P-wetherbeei_contig15250.1.1 vs. uniprot
Match: A0A2N3EC21_9PROT (NAD(+) diphosphatase n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-11 TaxID=2013657 RepID=A0A2N3EC21_9PROT)

HSP 1 Score: 295 bits (754), Expect = 7.230e-97
Identity = 145/242 (59.92%), Postives = 174/242 (71.90%), Query Frame = 1
Query:   19 LAGGATVLFLGLDKKDRAYFAVDLPGDTDPSKTGALKGFGEFGDLRGLAM--NIDAHDAAIAAQAKAVLKWHSTHKFCSACGAPSVIAEGGYRRDCPQCKTQHFPRTDPVVIMLATLGDKALLGRQKIFPKGMYSALAGFVEPGESIEEAVARELFEEAACRVSSVTYRFTQPWPYPMSLMIGCTAVADSDAIQVDGIELEEAVWVSRADLRDALEGKGNGKVMIPPPFAIAHQLVRQFVYG 738
            LAG +  +FLG++K+ +A FA D+ G  DP    ALKG G F DLR LAM   I   + AI AQAK+++ WH+ H FCS CG+ S +AE GY+R C  CK +HFPRTDPVVIMLA    K  LGRQKI+PKGM+SALAGFVEPGESIEEAVAREL EEA  R++S TY  TQPWPYP SLMIGC AVA+S+   +DGIEL E  W +R + +  L GKG+G V  PPPFAIAHQL++ F  G
Sbjct:   72 LAGESATVFLGINKRGKALFAADVSGLEDPDNHSALKGLGAFEDLRALAMAGEITPTELAIMAQAKSMIDWHNRHGFCSVCGSKSTMAEAGYKRVCLSCKAEHFPRTDPVVIMLAVHDGKCFLGRQKIWPKGMHSALAGFVEPGESIEEAVARELHEEAGLRIASATYHSTQPWPYPSSLMIGCHAVAESEDFTIDGIELSEGRWFTREEAQAVLAGKGDGTVWFPPPFAIAHQLIKAFAEG 313          
BLAST of mRNA_P-wetherbeei_contig15250.1.1 vs. uniprot
Match: A0A6N6VM57_9HYPH (NAD(+) diphosphatase n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VM57_9HYPH)

HSP 1 Score: 291 bits (745), Expect = 1.730e-95
Identity = 141/233 (60.52%), Postives = 171/233 (73.39%), Query Frame = 1
Query:   37 VLFLGLDKKDRAYFAVDLPGDTDPSKTGALKGFGEFGDLRGLAMN--IDAHDAAIAAQAKAVLKWHSTHKFCSACGAPSVIAEGGYRRDCPQCKTQHFPRTDPVVIMLATLGDKALLGRQKIFPKGMYSALAGFVEPGESIEEAVARELFEEAACRVSSVTYRFTQPWPYPMSLMIGCTAVADSDAIQVDGIELEEAVWVSRADLRDALEGKGNGKVMIPPPFAIAHQLVRQF 729
            V+FLG++++ ++ FA D+ G  D     ALKG G F +LRGLAM+  I   + AI AQAK+++ WH  H FCS CG  S I E GY+R CP CK +HFPRTDPV IMLAT  D   LGRQKI+PKGM+SALAGF+EPGESIEEAVAREL EEA  +VS VTY  TQPWPYP SLMIGC AVAD+D  ++DGIEL    W +RA+++  L GKG+G   +PPPFAIAHQLV+ F
Sbjct:   79 VIFLGINRRGKSLFAADVTGLKDAENHPALKGLGAFEELRGLAMSGDITPTELAILAQAKSMIDWHLRHGFCSVCGTASEIMEAGYKRQCPSCKAEHFPRTDPVAIMLATYKDSCFLGRQKIWPKGMHSALAGFIEPGESIEEAVARELHEEAGLKVSHVTYHSTQPWPYPSSLMIGCHAVADTDEFKIDGIELSAGRWFTRAEIQAVLAGKGDGSFWLPPPFAIAHQLVKAF 311          
BLAST of mRNA_P-wetherbeei_contig15250.1.1 vs. uniprot
Match: A0A2N3EJR5_9PROT (NAD(+) diphosphatase n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-12 TaxID=2013658 RepID=A0A2N3EJR5_9PROT)

HSP 1 Score: 290 bits (742), Expect = 4.770e-95
Identity = 144/242 (59.50%), Postives = 173/242 (71.49%), Query Frame = 1
Query:   19 LAGGATVLFLGLDKKDRAYFAVDLPGDTDPSKTGALKGFGEFGDLRGLAM--NIDAHDAAIAAQAKAVLKWHSTHKFCSACGAPSVIAEGGYRRDCPQCKTQHFPRTDPVVIMLATLGDKALLGRQKIFPKGMYSALAGFVEPGESIEEAVARELFEEAACRVSSVTYRFTQPWPYPMSLMIGCTAVADSDAIQVDGIELEEAVWVSRADLRDALEGKGNGKVMIPPPFAIAHQLVRQFVYG 738
            LAG   V+FLG++K+ +A FA D+    +P    ALKG G F DLR LAM   I   + AI AQAK+++ WH+ H FCS CG  S + E GY+R CP CK +HFPRTDPVVIMLA    K  LGRQKI+PKGMYSALAGFVEPGESIEEAVAREL EEA   ++SV+Y  TQPWPYP SLMIGC AVA++D  ++DG+EL +  W SR + +  L GKG+G V  PPPFAIA+QLVR F  G
Sbjct:   72 LAGEGIVVFLGINKRGKALFAADVSRLKEPENHAALKGLGAFEDLRALAMAGEITPTELAIMAQAKSMIDWHNRHGFCSVCGERSEMTEAGYKRTCPSCKAEHFPRTDPVVIMLAIHDGKCFLGRQKIWPKGMYSALAGFVEPGESIEEAVARELNEEAGLDIASVSYHSTQPWPYPSSLMIGCHAVAETDRFEIDGVELSDGRWFSREETQAILAGKGDGTVWFPPPFAIAYQLVRAFADG 313          
BLAST of mRNA_P-wetherbeei_contig15250.1.1 vs. uniprot
Match: A0A2A4S5N6_9HYPH (NAD(+) diphosphatase n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A4S5N6_9HYPH)

HSP 1 Score: 283 bits (725), Expect = 1.740e-92
Identity = 140/236 (59.32%), Postives = 170/236 (72.03%), Query Frame = 1
Query:   37 VLFLGLDKKDRAYFAVDLPGDTDPSKTGALKGFGEFGDLRGLAMN--IDAHDAAIAAQAKAVLKWHSTHKFCSACGAPSVIAEGGYRRDCPQCKTQHFPRTDPVVIMLATLGDKALLGRQKIFPKGMYSALAGFVEPGESIEEAVARELFEEAACRVSSVTYRFTQPWPYPMSLMIGCTAVADSDAIQVDGIELEEAVWVSRADLRDALEGKGNGKVMIPPPFAIAHQLVRQFVYG 738
            ++FLG++K+ +A FA+D+    DP   G LKG GEF DLRGL M   + A D AI AQAKA++ WH +H FC+ CG  S +AE GY+R+C  CKT+HFPRTDPVVIMLAT  D A LGRQ+ FPKGM+SALAGF+EPGESIEEAVAREL EEA     SV Y  TQPWP+P SLMIGC A A+S   ++DGIEL    W +R +L  AL G+G+    +PPPFAIAH LV+ FV G
Sbjct:   79 IVFLGINKRGKALFAIDISSAPDPENKGPLKGMGEFEDLRGLGMAEALPAGDMAIMAQAKAMIHWHVSHMFCATCGNKSTLAEAGYKRECASCKTEHFPRTDPVVIMLATYEDNAFLGRQRGFPKGMFSALAGFMEPGESIEEAVARELDEEAKIATKSVRYHSTQPWPFPASLMIGCVAEAESMEFELDGIELSGGRWFTRTELGAALAGEGDN-FFVPPPFAIAHHLVKAFVEG 313          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15250.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A353LUE8_9PROT9.360e-13175.00NAD(+) diphosphatase n=5 Tax=Alphaproteobacteria b... [more]
A0A3C0TSZ4_9PROT1.900e-10885.87NAD(+) diphosphatase (Fragment) n=1 Tax=Alphaprote... [more]
A0A2E1EIV4_9HYPH7.890e-10061.98NAD(+) diphosphatase n=4 Tax=Hyphomicrobiales TaxI... [more]
A7HPP4_PARL11.540e-9961.57NAD(+) diphosphatase n=1 Tax=Parvibaculum lavament... [more]
A0A2N3BYJ8_9PROT3.120e-9860.74NAD(+) diphosphatase n=2 Tax=unclassified Alphapro... [more]
A0A081BB97_9HYPH1.220e-9760.41NAD(+) diphosphatase n=1 Tax=Tepidicaulis marinus ... [more]
A0A2N3EC21_9PROT7.230e-9759.92NAD(+) diphosphatase n=1 Tax=Alphaproteobacteria b... [more]
A0A6N6VM57_9HYPH1.730e-9560.52NAD(+) diphosphatase n=1 Tax=Parvibaculum sediment... [more]
A0A2N3EJR5_9PROT4.770e-9559.50NAD(+) diphosphatase n=1 Tax=Alphaproteobacteria b... [more]
A0A2A4S5N6_9HYPH1.740e-9259.32NAD(+) diphosphatase n=1 Tax=Rhodobiaceae bacteriu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15250contigP-wetherbeei_contig15250:2..742 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog402881.Plav_0254
Preferred namenudC
PFAMsNUDIX,NUDIX-like,zf-NADH-PPase
Model size741
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00002
KEGG koko:K03426
KEGG ReactionR00103,R03004,R11104
KEGG Pathwayko00760,ko01100,ko04146,map00760,map01100,map04146
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.42e-100
EggNOG OGsCOG2816@1|root,COG2816@2|Bacteria,1QGCX@1224|Proteobacteria,2TVMG@28211|Alphaproteobacteria,1JNRC@119043|Rhodobiaceae
EC3.6.1.22
DescriptionNADH pyrophosphatase-like rudimentary NUDIX domain
Cds size738
COG categoryL
BRITEko00000,ko00001,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186049.6654294-UTR-P-wetherbeei_contig15250:1..41683186049.6654294-UTR-P-wetherbeei_contig15250:1..4Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig15250 2..4 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186049.6774113-CDS-P-wetherbeei_contig15250:4..7421683186049.6774113-CDS-P-wetherbeei_contig15250:4..742Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15250 5..742 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15250.1.1prot_P-wetherbeei_contig15250.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15250 5..742 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15250.1.1

>prot_P-wetherbeei_contig15250.1.1 ID=prot_P-wetherbeei_contig15250.1.1|Name=mRNA_P-wetherbeei_contig15250.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=246bp
MFADALAGGATVLFLGLDKKDRAYFAVDLPGDTDPSKTGALKGFGEFGDL
RGLAMNIDAHDAAIAAQAKAVLKWHSTHKFCSACGAPSVIAEGGYRRDCP
QCKTQHFPRTDPVVIMLATLGDKALLGRQKIFPKGMYSALAGFVEPGESI
EEAVARELFEEAACRVSSVTYRFTQPWPYPMSLMIGCTAVADSDAIQVDG
IELEEAVWVSRADLRDALEGKGNGKVMIPPPFAIAHQLVRQFVYG*
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mRNA from alignment at P-wetherbeei_contig15250:2..742+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15250.1.1 ID=mRNA_P-wetherbeei_contig15250.1.1|Name=mRNA_P-wetherbeei_contig15250.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=741bp|location=Sequence derived from alignment at P-wetherbeei_contig15250:2..742+ (Phaeothamnion wetherbeei SAG_119_79)
AATATGTTCGCCGATGCGCTGGCGGGCGGGGCGACGGTGCTATTTTTGGG GCTCGACAAAAAAGACCGCGCCTATTTCGCGGTCGATCTGCCCGGCGATA CCGATCCCAGCAAAACCGGCGCACTGAAAGGCTTTGGCGAGTTCGGCGAT CTGCGCGGCCTGGCCATGAATATTGATGCGCATGACGCCGCCATTGCCGC CCAGGCCAAGGCGGTGCTGAAATGGCACAGCACCCACAAATTCTGTTCGG CCTGCGGTGCGCCATCCGTGATCGCCGAGGGTGGCTATCGCCGCGATTGC CCGCAATGCAAGACCCAGCATTTTCCCCGCACCGATCCCGTCGTAATTAT GCTGGCGACCCTTGGCGACAAGGCGCTGCTCGGCCGCCAGAAAATTTTTC CCAAGGGCATGTATTCCGCCCTGGCCGGATTTGTAGAACCCGGCGAATCC ATTGAAGAGGCGGTTGCCCGCGAACTGTTCGAGGAAGCCGCGTGCCGCGT ATCTTCGGTCACCTACCGCTTCACCCAGCCCTGGCCCTATCCGATGTCGC TGATGATCGGCTGCACGGCTGTGGCTGACAGCGATGCGATTCAGGTGGAC GGTATCGAACTGGAAGAAGCCGTGTGGGTCAGCCGCGCCGATCTGCGCGA TGCGCTCGAAGGCAAAGGCAATGGCAAGGTAATGATCCCGCCGCCGTTCG CCATCGCGCATCAACTGGTGCGCCAGTTTGTCTATGGGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15250:2..742+

>mRNA_P-wetherbeei_contig15250.1.1 ID=mRNA_P-wetherbeei_contig15250.1.1|Name=mRNA_P-wetherbeei_contig15250.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=738bp|location=Sequence derived from alignment at P-wetherbeei_contig15250:2..742+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTTCGCCGATGCGCTGGCGGGCGGGGCGACGGTGCTATTTTTGGGGCT
CGACAAAAAAGACCGCGCCTATTTCGCGGTCGATCTGCCCGGCGATACCG
ATCCCAGCAAAACCGGCGCACTGAAAGGCTTTGGCGAGTTCGGCGATCTG
CGCGGCCTGGCCATGAATATTGATGCGCATGACGCCGCCATTGCCGCCCA
GGCCAAGGCGGTGCTGAAATGGCACAGCACCCACAAATTCTGTTCGGCCT
GCGGTGCGCCATCCGTGATCGCCGAGGGTGGCTATCGCCGCGATTGCCCG
CAATGCAAGACCCAGCATTTTCCCCGCACCGATCCCGTCGTAATTATGCT
GGCGACCCTTGGCGACAAGGCGCTGCTCGGCCGCCAGAAAATTTTTCCCA
AGGGCATGTATTCCGCCCTGGCCGGATTTGTAGAACCCGGCGAATCCATT
GAAGAGGCGGTTGCCCGCGAACTGTTCGAGGAAGCCGCGTGCCGCGTATC
TTCGGTCACCTACCGCTTCACCCAGCCCTGGCCCTATCCGATGTCGCTGA
TGATCGGCTGCACGGCTGTGGCTGACAGCGATGCGATTCAGGTGGACGGT
ATCGAACTGGAAGAAGCCGTGTGGGTCAGCCGCGCCGATCTGCGCGATGC
GCTCGAAGGCAAAGGCAATGGCAAGGTAATGATCCCGCCGCCGTTCGCCA
TCGCGCATCAACTGGTGCGCCAGTTTGTCTATGGGTAG
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