mRNA_P-wetherbeei_contig15243.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15243.1.1
Unique NamemRNA_P-wetherbeei_contig15243.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15243.1.1 vs. uniprot
Match: A0A127F3N7_9HYPH (TTT family tricarboxylate transporter, receptor protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127F3N7_9HYPH)

HSP 1 Score: 328 bits (840), Expect = 1.240e-108
Identity = 172/316 (54.43%), Postives = 219/316 (69.30%), Query Frame = 1
Query:   31 LAAALVVLLPA----GVSAQ-NWPSRTVKFVVPLGPSSGADITARLVADRLQTKWGQPVVVENRTGGDGLVGIQAFLSANDDHTLFFGPTASYTAHPYMRTSVPYNAADLVPIVRTTVTVVSVAVPTALGVNTLKELIDIANKQPGKLNWSAVTGLNDFQFGAFVKVAGADMVRVPYRDLNQAVNDLGEGRIQVYSSAYATVRPAIESGKIKSIAITNSARAPMLPDIPTAREAGFPALEFDGLVGIHGVPAVSQSTRAKIAADTIEALRDPVIKQRLTAGGTVVLPGTTEEFAKAIEHQKAVAAQTAKVLGVSPA 963
            L  A+ VLL A      SAQ NWP R VKFV+PLGP +G DITARL++DRL  KWGQ VVVENR GGDG+V + +F++ NDDHTL   PT+S+T HP+M   +PY+A +LVP+VR T T+V+V VP +    +LKELI  A   PGKLNW+ +TG  DF F  F K  G  + +VPYR+  QA  DL EGRIQ+  +AYA VRP +++GK+K +A T S RA  +PD+PTA EAGFP +  DGLVG+ G+  + +  RA+I AD IE LRDP I + LT+ G VV PGT +EFA AIE Q A AA+T K+LG+  A
Sbjct:    2 LRFAVAVLLSALALGDASAQANWPQRGVKFVIPLGPGAGVDITARLLSDRLAQKWGQAVVVENRPGGDGVVALSSFIAGNDDHTLLMSPTSSFTHHPWMHDKMPYDAKELVPLVRMTNTLVAVVVPASSPYASLKELIADAKAHPGKLNWATITGFFDFMFEGFQKREGVVITKVPYRNTVQAAQDLAEGRIQMMMAAYAIVRPLVQAGKLKVLAFTASQRAAAVPDVPTAAEAGFPGMTIDGLVGVFGMKNLDEKARARIEADVIEQLRDPKIIETLTSTGQVVNPGTAKEFAAAIEAQTAQAAETGKLLGIKAA 317          
BLAST of mRNA_P-wetherbeei_contig15243.1.1 vs. uniprot
Match: A0A371BB99_9HYPH (Tripartite tricarboxylate transporter substrate binding protein n=2 Tax=unclassified Pseudolabrys TaxID=2638514 RepID=A0A371BB99_9HYPH)

HSP 1 Score: 319 bits (817), Expect = 4.620e-105
Identity = 161/320 (50.31%), Postives = 217/320 (67.81%), Query Frame = 1
Query:   19 HIGKLAAALVVLL-----PAGVSAQNWPSRTVKFVVPLGPSSGADITARLVADRLQTKWGQPVVVENRTGGDGLVGIQAFLSANDDHTLFFGPTASYTAHPYMRTSVPYNAADLVPIVRTTVTVVSVAVPTALGVNTLKELIDIANKQPGKLNWSAVTGLNDFQFGAFVKVAGADMVRVPYRDLNQAVNDLGEGRIQVYSSAYATVRPAIESGKIKSIAITNSARAPMLPDIPTAREAGFPALEFDGLVGIHGVPAVSQSTRAKIAADTIEALRDPVIKQRLTAGGTVVLPGTTEEFAKAIEHQKAVAAQTAKVLGVSPA 963
             +G LA AL+        PA   A +WP+RTV+F++PLGP SGADITAR++AD+LQTKWGQ VVVENR GGD ++ I A + ANDDH L F P +++TAHP +   +PYN ADLVPI R T T++++ VP  LGV+++KEL+     +P KLN+++VTG ND  F AF+K    +M RVPY+D   A+ND+ EGRIQ +  AYA +RP +++GK+K+IA+TN   A ML  IPTA +AG+ +LE DGLVG+ G  +V+ + R KIAAD    L DP I  +L A G VV PG+  EFA A++ Q     +  K LG+  A
Sbjct:    3 RLGVLALALLSFAALASAPAWSKAADWPTRTVRFIIPLGPGSGADITARILADKLQTKWGQSVVVENRPGGDAILAINAVIGANDDHVLLFAPASTFTAHPLLHEKMPYNPADLVPIARVTNTLIALGVPADLGVSSIKELVAKIKAEPSKLNYASVTGANDLLFAAFLKAEKLEMTRVPYKDPVSAINDVAEGRIQAFVGAYAIMRPRVDAGKVKAIALTNVQTAEMLKAIPTAAQAGYKSLELDGLVGVLGPKSVAPAVREKIAADIRAMLNDPAINPKLAATGQVVNPGSPAEFAAALKEQSDKVGEIGKTLGIKAA 322          
BLAST of mRNA_P-wetherbeei_contig15243.1.1 vs. uniprot
Match: A0A1W6ZUC7_9HYPH (Uncharacterized protein n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZUC7_9HYPH)

HSP 1 Score: 318 bits (815), Expect = 6.880e-105
Identity = 155/309 (50.16%), Postives = 208/309 (67.31%), Query Frame = 1
Query:   31 LAAALVVLLPAGVSAQNWPSRTVKFVVPLGPSSGADITARLVADRLQTKWGQPVVVENRTGGDGLVGIQAFLSANDDHTLFFGPTASYTAHPYMRTSVPYNAADLVPIVRTTVTVVSVAVPTALGVNTLKELIDIANKQPGKLNWSAVTGLNDFQFGAFVKVAGADMVRVPYRDLNQAVNDLGEGRIQVYSSAYATVRPAIESGKIKSIAITNSARAPMLPDIPTAREAGFPALEFDGLVGIHGVPAVSQSTRAKIAADTIEALRDPVIKQRLTAGGTVVLPGTTEEFAKAIEHQKAVAAQTAKVLGVS 957
            LA  L+        AQ WP R V F++PLG  SG DIT+RL+AD+L  KWG+PVV+ENR GGD +V I AF+ A DDHTL   PT+++TAHP +   +PY   DLVPI R T T++++ VP +L VNTL + + +A ++PG LN++  TG  DF F  F+K AG D+ +VPY+D  QA+NDL EGRIQ+Y +AYA +RP IE+GK+K +A+ N  RAP LP++PTA EAG+P+L  DGLVG+ G   +S   R +I+AD +EA  DP I  +LTA G VV PG   EFA  I+ Q+      AK +G +
Sbjct:    6 LALGLLTCSLVSAHAQTWPQRNVTFILPLGAGSGVDITSRLIADKLSAKWGKPVVIENRPGGDAIVAINAFVGAADDHTLLMAPTSTFTAHPLLHAKLPYQQDDLVPIARATNTLIAIGVPASLNVNTLADFVKLAKEKPGSLNYAGTTGAVDFVFSGFLKDAGIDVTKVPYKDGVQALNDLAEGRIQIYGAAYAIMRPQIEAGKVKVLALMNKERAPALPNVPTAAEAGYPSLTLDGLVGLFGPRKMSPELRDRISADVVEAAGDPSIASKLTATGQVVRPGKAAEFAAEIDDQRKRVNAAAKAIGAT 314          
BLAST of mRNA_P-wetherbeei_contig15243.1.1 vs. uniprot
Match: A0A537L7N0_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537L7N0_9PROT)

HSP 1 Score: 317 bits (811), Expect = 3.740e-104
Identity = 152/298 (51.01%), Postives = 212/298 (71.14%), Query Frame = 1
Query:   61 AGVSAQNWPSRTVKFVVPLGPSSGADITARLVADRLQTKWGQPVVVENRTGGDGLVGIQAFLSANDDHTLFFGPTASYTAHPYMRTSVPYNAADLVPIVRTTVTVVSVAVPTALGVNTLKELIDIANKQPGKLNWSAVTGLNDFQFGAFVKVAGADMVRVPYRDLNQAVNDLGEGRIQVYSSAYATVRPAIESGKIKSIAITNSARAPMLPDIPTAREAGFPALEFDGLVGIHGVPAVSQSTRAKIAADTIEALRDPVIKQRLTAGGTVVLPGTTEEFAKAIEHQKAVAAQTAKVLGV 954
            A    Q+WP+R+V+ +VPLGP SG DITAR++AD+L  KWG+PVVVEN+ GGD ++ I AF +ANDDHTL   P++++TAHP++   +PY+  +LVPI R + TVV+V VP +LGVN++ +LI  A  +PGKLN ++ TG NDF    F+K +GA++ RVPYRD  QA+NDL EGRIQ+Y +AYA +RP +++GK+K IAITNS RAP++ D+PTA+E+G PAL  DGLVG+ G P + +  R +IAAD I    +P I  ++   G +V P   +EFA+ I  Q  V ++ A   GV
Sbjct:   21 AQAQTQSWPTRSVRLIVPLGPGSGVDITARVIADKLAAKWGKPVVVENKPGGDAILAITAFTAANDDHTLLMAPSSTFTAHPFLHEKLPYDVKELVPIARVSNTVVAVGVPASLGVNSIDDLITRAKAEPGKLNMASATGANDFVATGFLKQSGAEIARVPYRDTVQAINDLAEGRIQLYVAAYAIMRPQVQAGKVKIIAITNSERAPVIGDVPTAKESGHPALGIDGLVGLFGSPEMPKELRDRIAADVIAVTNEPEIAGKIALTGQIVRPSGADEFAREINTQSDVVSKAAAAAGV 318          
BLAST of mRNA_P-wetherbeei_contig15243.1.1 vs. uniprot
Match: A0A346A240_9HYPH (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A346A240_9HYPH)

HSP 1 Score: 314 bits (805), Expect = 3.030e-103
Identity = 155/307 (50.49%), Postives = 206/307 (67.10%), Query Frame = 1
Query:   34 AAALVVLLPAGVSAQNWPSRTVKFVVPLGPSSGADITARLVADRLQTKWGQPVVVENRTGGDGLVGIQAFLSANDDHTLFFGPTASYTAHPYMRTSVPYNAADLVPIVRTTVTVVSVAVPTALGVNTLKELIDIANKQPGKLNWSAVTGLNDFQFGAFVKVAGADMVRVPYRDLNQAVNDLGEGRIQVYSSAYATVRPAIESGKIKSIAITNSARAPMLPDIPTAREAGFPALEFDGLVGIHGVPAVSQSTRAKIAADTIEALRDPVIKQRLTAGGTVVLPGTTEEFAKAIEHQKAVAAQTAKVLGV 954
            A A  V +PA      WP+R VKF++PLGP SG DITARL+AD+L  +WGQPVVVENR GGD +V I A + A DDH L F P +++TAHP +  S+PY   DLVPI R T T++++ VP+ LGV T+KEL D     PGKLN+++VTG ND  F AF+K    DM +VPY+D  QA+NDL EGRIQ Y  AYA +RP ++ GK+  +A+TN   A  L  +PTAREAGFP+LEFDGLVG+ G      + + +IA D  E + DP + ++L+  G VV PGT +EFA  ++ Q+   A+  + LG+
Sbjct:   15 AVAATVAMPAQAQTA-WPTRPVKFIIPLGPGSGVDITARLLADKLSERWGQPVVVENRPGGDAIVAINAVVGAKDDHVLLFAPASTFTAHPLLHDSLPYRQDDLVPIARVTNTLITLGVPSELGVKTVKELTDKIKAAPGKLNYASVTGANDLMFAAFLKTEKLDMAKVPYKDTVQAINDLAEGRIQAYVGAYAIMRPRVQQGKVTVLALTNRQHAKALDAVPTAREAGFPSLEFDGLVGLLGAKGFPDAAKQRIAKDIREIVSDPAVGEKLSLTGQVVNPGTADEFAGDLKDQRDAVARIGQTLGI 320          
BLAST of mRNA_P-wetherbeei_contig15243.1.1 vs. uniprot
Match: A0A127EXQ9_9HYPH (ABC transporter substrate-binding protein n=2 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EXQ9_9HYPH)

HSP 1 Score: 314 bits (804), Expect = 4.590e-103
Identity = 155/300 (51.67%), Postives = 204/300 (68.00%), Query Frame = 1
Query:   58 PAGVSAQNWPSRTVKFVVPLGPSSGADITARLVADRLQTKWGQPVVVENRTGGDGLVGIQAFLSANDDHTLFFGPTASYTAHPYMRTSVPYNAADLVPIVRTTVTVVSVAVPTALGVNTLKELIDIANKQPGKLNWSAVTGLNDFQFGAFVKVAGADMVRVPYRDLNQAVNDLGEGRIQVYSSAYATVRPAIESGKIKSIAITNSARAPMLPDIPTAREAGFPALEFDGLVGIHGVPAVSQSTRAKIAADTIEAL-RDPVIKQRLTAGGTVVLPGTTEEFAKAIEHQKAVAAQTAKVLGV 954
            P+   A  WP R+V+F + LG  SG DI  RL+ADRL  KWGQPVV+EN+ GGDG+V I AFL A DDH L   PT+++ AHP++  ++PY  +DL PI R + TV+ + VP AL VN++KEL+ +A  +PG+LNW+ +TG  DF F  + K    DM +VPYR+   A NDL E R+QVY SA A  +P +++GKIK +A+ NS RAP+ PDIPT  EAGFP +  DGLVG+ G P+  Q+ R KIAAD  + +  DP+IK RL A   +  PGT EEFAKAIE Q++  AQ A+ LGV
Sbjct:   23 PSSAQAPAWPQRSVRFFLTLGAGSGTDIGGRLLADRLSRKWGQPVVIENKPGGDGIVAISAFLGAKDDHVLLMSPTSAFIAHPWVHDNLPYKPSDLTPIARVSNTVIGITVPKALPVNSMKELVALAKTKPGELNWAGITGALDFNFAGWAKSQNLDMKKVPYRNPVDASNDLAENRVQVYESAVAIAQPQLQAGKIKLLAVVNSVRAPVYPDIPTVAEAGFPNMTIDGLVGLFGTPSTPQALREKIAADVKDVMDADPIIKDRLMATAQLPNPGTPEEFAKAIEDQRSKLAQNARDLGV 322          
BLAST of mRNA_P-wetherbeei_contig15243.1.1 vs. uniprot
Match: A0A537MSM0_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537MSM0_9PROT)

HSP 1 Score: 313 bits (803), Expect = 6.730e-103
Identity = 157/318 (49.37%), Postives = 220/318 (69.18%), Query Frame = 1
Query:   13 SSHIGKLAAALVVLLPAGVS--AQNWPSRTVKFVVPLGPSSGADITARLVADRLQTKWGQPVVVENRTGGDGLVGIQAFLSANDDHTLFFGPTASYTAHPYMRTSVPYNAADLVPIVRTTVTVVSVAVPTALGVNTLKELIDIANKQPGKLNWSAVTGLNDFQFGAFVKVAGADMVRVPYRDLNQAVNDLGEGRIQVYSSAYATVRPAIESGKIKSIAITNSARAPMLPDIPTAREAGFPALEFDGLVGIHGVPAVSQSTRAKIAADTIEALRDP--VIKQRLTAGGTVVLPGTTEEFAKAIEHQKAVAAQTAKVLGV 954
            S ++  L   L +LL A     AQ+WP+R VKF++ LGP SGADI+ARL+ADRL  KWGQP+V+EN+ GGDG+V I AF+SA DDH L + P++S+  HPY   ++PYN  DL PI R + TVV ++VP +L   +LKE+++ A   PG++NW+ +TG  D  F +++K  G D+ +VPYR+  +A NDL  GR+Q+Y SAYA  RP IE+GK++ +A+TN ARA  +P+IPT  EAGFPAL  DGLVG+ G P +  + R +IA+D I+A+ D   +IK RL     +  PG   EFAK+I+ Q+AV A++AK LG+
Sbjct:    7 SRYLAALTLLLTLLLGATAPSMAQSWPTRPVKFILTLGPGSGADISARLLADRLTEKWGQPIVIENKPGGDGIVAINAFVSAQDDHVLLYAPSSSFIGHPYQHDNLPYNPGDLAPIARVSNTVVGISVPVSLPAKSLKEVVEAARANPGQMNWAGLTGALDIMFESWLKNIGVDVKKVPYRNPVEAANDLASGRVQIYESAYAIARPQIEAGKVRILAVTNMARAETIPNIPTVAEAGFPALTMDGLVGLFGPPGMPTAQRERIASD-IKAVMDSDAIIKNRLLVTAQIPNPGGPAEFAKSIDEQRAVLAKSAKELGM 323          
BLAST of mRNA_P-wetherbeei_contig15243.1.1 vs. uniprot
Match: A0A1Q7B3P1_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7B3P1_9PROT)

HSP 1 Score: 313 bits (802), Expect = 8.640e-103
Identity = 159/314 (50.64%), Postives = 211/314 (67.20%), Query Frame = 1
Query:   22 IGKLAAALVVLLPAGVSAQNWPSRTVKFVVPLGPSSGADITARLVADRLQTKWGQPVVVENRTGGDGLVGIQAFLSANDDHTLFFGPTASYTAHPYMRTSVPYNAADLVPIVRTTVTVVSVAVPTALGVNTLKELIDIANKQPGKLNWSAVTGLNDFQFGAFVKVAGADMVRVPYRDLNQAVNDLGEGRIQVYSSAYATVRPAIESGKIKSIAITNSARAPMLPDIPTAREAGFPALEFDGLVGIHGVPAVSQSTRAKIAADTIEALR-DPVIKQRLTAGGTVVLPGTTEEFAKAIEHQKAVAAQTAKVLGVSP 960
            +G LA  ++   P+  +AQ WP RTVKF+VPLGP SG DI ARL+ADRL T+W QPVVVENR GGDG+V I AF+ A+DDH L   PT+S+TAHPY+  ++PY  +DL+PI R + T++++AVP +L + +L EL+ +   QP KLNW+ VTG  DF F  F+K     M +VPYR+  +A NDL EGR+Q+Y +A A VRP +++GKIK +A+TNS RAP  PD+PT +EAG+P L FDGLVG  G   +    R +IA D    L  DP+I  RL A G ++  G   EFA+A E Q+   A  A  LG+ P
Sbjct:   11 LGLLAPLMLGAPPS--AAQTWPQRTVKFLVPLGPGSGVDIGARLLADRLSTRWDQPVVVENRPGGDGIVAISAFVGAHDDHILLASPTSSFTAHPYLHENLPYKPSDLLPIARVSNTLITIAVPVSLNIGSLAELVALTRAQPAKLNWAGVTGALDFLFAGFLKRQNLTMTKVPYRNPVEAANDLAEGRVQMYMAALAIVRPQLQTGKIKLLAVTNSVRAPAAPDVPTVKEAGYPELTFDGLVGFFGPSGMPNELRERIATDIRAVLAADPLIGDRLAATGQILNVGGPAEFAQATEEQREKIATIANDLGIKP 322          
BLAST of mRNA_P-wetherbeei_contig15243.1.1 vs. uniprot
Match: A0A0Q7TRR4_9HYPH (Uncharacterized protein n=2 Tax=Pseudolabrys sp. Root1462 TaxID=1736466 RepID=A0A0Q7TRR4_9HYPH)

HSP 1 Score: 313 bits (803), Expect = 9.350e-103
Identity = 159/324 (49.07%), Postives = 217/324 (66.98%), Query Frame = 1
Query:    7 NFSSHIGKLAAALVVLLPAGVS-----AQNWPSRTVKFVVPLGPSSGADITARLVADRLQTKWGQPVVVENRTGGDGLVGIQAFLSANDDHTLFFGPTASYTAHPYMRTSVPYNAADLVPIVRTTVTVVSVAVPTALGVNTLKELIDIANKQPGKLNWSAVTGLNDFQFGAFVKVAGADMVRVPYRDLNQAVNDLGEGRIQVYSSAYATVRPAIESGKIKSIAITNSARAPMLPDIPTAREAGFPALEFDGLVGIHGVPAVSQSTRAKIAADTIEALRDPVIKQRLTAGGTVVLPGTTEEFAKAIEHQKAVAAQTAKVLGVSPA 963
             F      LA AL+V+  A +S     A +WPSRTV+F++PLGP SGADITAR++AD+LQTKWGQ VVVENR GGD ++ + A ++ANDDH L F P +++TAHP +   +PY    LVP+ R T T++++ VP  LGV+++KEL+     +PGKLN+++VTG ND  F AF+K    +M +VPY+D   A+ND+ EGRIQ +  AYA +RP ++ GK+K IA+TN   A  L DIPTA EAG+ +LE DGLVG+ G  +V+   R KIA+D    L DP I  +L A G VV PG+ +EFA A++ Q    A   K+LG+  A
Sbjct:   13 GFMRFFRTLAVALLVVGAAALSVLQSQAADWPSRTVRFIIPLGPGSGADITARILADKLQTKWGQSVVVENRPGGDAMIAMNAVIAANDDHVLLFAPASTFTAHPLLHDKLPYQRDALVPVARVTNTLIALGVPADLGVSSIKELVAKIKAEPGKLNYASVTGANDLLFAAFLKTEKLEMTKVPYKDPVSAINDVAEGRIQAFVGAYAIMRPRVQQGKVKVIALTNVDHAKSLDDIPTAAEAGYKSLELDGLVGVLGPKSVAPDVRKKIASDIRGILDDPAINAKLVATGQVVNPGSPDEFAAALKDQTDKVADIGKILGIKAA 336          
BLAST of mRNA_P-wetherbeei_contig15243.1.1 vs. uniprot
Match: A0A1Q7BBP0_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7BBP0_9PROT)

HSP 1 Score: 310 bits (794), Expect = 1.190e-101
Identity = 163/320 (50.94%), Postives = 213/320 (66.56%), Query Frame = 1
Query:    1 MPNFSSHIGKLAAALVVLLPAGVSAQNWPSRTVKFVVPLGPSSGADITARLVADRLQTKWGQPVVVENRTGGDGLVGIQAFLSANDDHTLFFGPTASYTAHPYMRTSVPYNAADLVPIVRTTVTVVSVAVPTALGVNTLKELIDIANKQPGKLNWSAVTGLNDFQFGAFVKVAGADMVRVPYRDLNQAVNDLGEGRIQVYSSAYATVRPAIESGKIKSIAITNSARAPMLPDIPTAREAGFPALEFDGLVGIHGVPAVSQSTRAKIAADTIEALRDPVIKQRLTAGGTVVLPGTTEEFAKAIEHQKAVAAQTAKVLGVSP 960
            M   +   G LAA  +   P+  +AQ WP R+VK +V LGP SG DI  RL+ADRL  +WGQPVVVENR GGDGLV I AF++ANDDH L   P+ S+ AHP++   +PY   DLVPI R + T+V +AVP AL V +L +L+ +A  QPGKLNW+  TG N+F F AF+K AG  M +VPYR+L +A NDL  GRI V  +A+A VRP IE+GK+K +A+TN+ R+ +LPD+PT  EAG+P L  DGLVG  G P + +  R  IAAD  EA+ D  +++RL   G +   G   +FA AIE Q+A  A+ AK LG+ P
Sbjct:    1 MQRLAFAFGLLAALFLAAKPS--TAQTWPQRSVKLIVTLGPGSGVDIGTRLIADRLSRRWGQPVVVENRPGGDGLVAIGAFVAANDDHVLLATPSGSFNAHPFIYKQLPYKPEDLVPIARVSNTIVVIAVPAALEVKSLADLVAMARAQPGKLNWAGTTGSNEFLFAAFLKNAGLSMSKVPYRNLVEAANDLATGRIDVNVTAFAIVRPQIEAGKVKLLAVTNTTRSTVLPDVPTTTEAGYPDLALDGLVGFFGPPTMPERIRDGIAADVREAM-DAAVEERLDLTGQIPNFGGPAQFAAAIEAQRAGLARAAKDLGIVP 317          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15243.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A127F3N7_9HYPH1.240e-10854.43TTT family tricarboxylate transporter, receptor pr... [more]
A0A371BB99_9HYPH4.620e-10550.31Tripartite tricarboxylate transporter substrate bi... [more]
A0A1W6ZUC7_9HYPH6.880e-10550.16Uncharacterized protein n=1 Tax=Pseudorhodoplanes ... [more]
A0A537L7N0_9PROT3.740e-10451.01Tripartite tricarboxylate transporter substrate bi... [more]
A0A346A240_9HYPH3.030e-10350.49Tripartite tricarboxylate transporter substrate bi... [more]
A0A127EXQ9_9HYPH4.590e-10351.67ABC transporter substrate-binding protein n=2 Tax=... [more]
A0A537MSM0_9PROT6.730e-10349.37Tripartite tricarboxylate transporter substrate bi... [more]
A0A1Q7B3P1_9PROT8.640e-10350.64Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A0Q7TRR4_9HYPH9.350e-10349.07Uncharacterized protein n=2 Tax=Pseudolabrys sp. R... [more]
A0A1Q7BBP0_9PROT1.190e-10150.94Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15243contigP-wetherbeei_contig15243:597..1565 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog319003.Bra1253DRAFT_01042
PFAMsTctC
Model size969
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue4.92e-69
EggNOG OGsCOG3181@1|root,COG3181@2|Bacteria,1NRZN@1224|Proteobacteria,2UQVQ@28211|Alphaproteobacteria,3K3Q7@41294|Bradyrhizobiaceae
DescriptionTripartite tricarboxylate transporter family receptor
Cds size969
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186049.3922849-CDS-P-wetherbeei_contig15243:596..15651683186049.3922849-CDS-P-wetherbeei_contig15243:596..1565Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15243 597..1565 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15243.1.1prot_P-wetherbeei_contig15243.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15243 597..1565 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15243.1.1

>prot_P-wetherbeei_contig15243.1.1 ID=prot_P-wetherbeei_contig15243.1.1|Name=mRNA_P-wetherbeei_contig15243.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=323bp
MPNFSSHIGKLAAALVVLLPAGVSAQNWPSRTVKFVVPLGPSSGADITAR
LVADRLQTKWGQPVVVENRTGGDGLVGIQAFLSANDDHTLFFGPTASYTA
HPYMRTSVPYNAADLVPIVRTTVTVVSVAVPTALGVNTLKELIDIANKQP
GKLNWSAVTGLNDFQFGAFVKVAGADMVRVPYRDLNQAVNDLGEGRIQVY
SSAYATVRPAIESGKIKSIAITNSARAPMLPDIPTAREAGFPALEFDGLV
GIHGVPAVSQSTRAKIAADTIEALRDPVIKQRLTAGGTVVLPGTTEEFAK
AIEHQKAVAAQTAKVLGVSPAN*
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mRNA from alignment at P-wetherbeei_contig15243:597..1565+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15243.1.1 ID=mRNA_P-wetherbeei_contig15243.1.1|Name=mRNA_P-wetherbeei_contig15243.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=969bp|location=Sequence derived from alignment at P-wetherbeei_contig15243:597..1565+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGAATTTCTCGAGCCACATCGGCAAATTGGCTGCGGCGCTCGTCGT GCTGCTGCCGGCAGGCGTCAGCGCGCAGAACTGGCCGAGCAGAACAGTGA AGTTCGTCGTGCCGCTCGGACCAAGCTCGGGCGCGGACATAACGGCCCGG CTGGTAGCCGATCGTCTGCAGACCAAGTGGGGGCAGCCGGTCGTCGTCGA GAATCGGACCGGCGGCGACGGGCTCGTTGGAATCCAGGCGTTCCTGTCGG CCAACGACGACCACACGCTCTTTTTCGGACCCACTGCGAGCTACACGGCG CATCCCTATATGCGCACGTCGGTGCCCTATAACGCTGCCGATCTCGTTCC GATCGTGCGCACGACGGTCACCGTGGTTTCCGTCGCAGTGCCCACCGCTC TCGGCGTCAATACGCTGAAGGAACTGATCGACATCGCCAACAAGCAGCCG GGAAAGCTGAACTGGTCCGCCGTCACCGGGCTCAACGACTTCCAGTTCGG CGCATTCGTCAAAGTTGCCGGGGCGGATATGGTCCGGGTGCCCTATCGCG ATCTCAACCAGGCCGTCAACGATCTCGGCGAGGGACGAATCCAGGTCTAC TCGTCGGCCTACGCTACCGTCAGGCCCGCAATCGAGAGCGGTAAGATCAA ATCGATCGCGATCACGAATTCGGCGCGCGCACCGATGCTGCCCGACATTC CAACGGCGCGCGAGGCCGGCTTCCCGGCGCTCGAGTTCGATGGCCTCGTC GGAATCCACGGCGTGCCGGCGGTGTCGCAATCGACGCGCGCGAAGATTGC TGCCGACACGATCGAGGCATTGAGGGACCCGGTGATAAAGCAGCGCCTGA CTGCCGGCGGCACCGTCGTGCTGCCCGGGACGACGGAAGAGTTCGCCAAA GCGATCGAGCACCAGAAGGCCGTTGCCGCGCAAACCGCGAAAGTCCTCGG CGTCTCGCCTGCGAACTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15243:597..1565+

>mRNA_P-wetherbeei_contig15243.1.1 ID=mRNA_P-wetherbeei_contig15243.1.1|Name=mRNA_P-wetherbeei_contig15243.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=969bp|location=Sequence derived from alignment at P-wetherbeei_contig15243:597..1565+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGAATTTCTCGAGCCACATCGGCAAATTGGCTGCGGCGCTCGTCGT
GCTGCTGCCGGCAGGCGTCAGCGCGCAGAACTGGCCGAGCAGAACAGTGA
AGTTCGTCGTGCCGCTCGGACCAAGCTCGGGCGCGGACATAACGGCCCGG
CTGGTAGCCGATCGTCTGCAGACCAAGTGGGGGCAGCCGGTCGTCGTCGA
GAATCGGACCGGCGGCGACGGGCTCGTTGGAATCCAGGCGTTCCTGTCGG
CCAACGACGACCACACGCTCTTTTTCGGACCCACTGCGAGCTACACGGCG
CATCCCTATATGCGCACGTCGGTGCCCTATAACGCTGCCGATCTCGTTCC
GATCGTGCGCACGACGGTCACCGTGGTTTCCGTCGCAGTGCCCACCGCTC
TCGGCGTCAATACGCTGAAGGAACTGATCGACATCGCCAACAAGCAGCCG
GGAAAGCTGAACTGGTCCGCCGTCACCGGGCTCAACGACTTCCAGTTCGG
CGCATTCGTCAAAGTTGCCGGGGCGGATATGGTCCGGGTGCCCTATCGCG
ATCTCAACCAGGCCGTCAACGATCTCGGCGAGGGACGAATCCAGGTCTAC
TCGTCGGCCTACGCTACCGTCAGGCCCGCAATCGAGAGCGGTAAGATCAA
ATCGATCGCGATCACGAATTCGGCGCGCGCACCGATGCTGCCCGACATTC
CAACGGCGCGCGAGGCCGGCTTCCCGGCGCTCGAGTTCGATGGCCTCGTC
GGAATCCACGGCGTGCCGGCGGTGTCGCAATCGACGCGCGCGAAGATTGC
TGCCGACACGATCGAGGCATTGAGGGACCCGGTGATAAAGCAGCGCCTGA
CTGCCGGCGGCACCGTCGTGCTGCCCGGGACGACGGAAGAGTTCGCCAAA
GCGATCGAGCACCAGAAGGCCGTTGCCGCGCAAACCGCGAAAGTCCTCGG
CGTCTCGCCTGCGAACTAA
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