mRNA_P-wetherbeei_contig15235.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15235.1.1 vs. uniprot
Match: A0A836CIH7_9STRA (Protein in complex with Mn, Zn, and Amp n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH7_9STRA) HSP 1 Score: 206 bits (525), Expect = 1.030e-61 Identity = 114/197 (57.87%), Postives = 137/197 (69.54%), Query Frame = 1
Query: 1 FDTGQAARYLGLPSFSYAHLLDRYCGVMADKRHQLSDWRVRPLPAEMLLYACSDTHYLLYIADRLRTELHARGGAVALRTVLDASRMLCGRRYEKEPFRPSGYDTVLQRQGHRLTAAAANLSGEQRRVMAALWEWRDATARREDESLGYVMSAYVMSRVAAVLPASADALGRCGNPLPPLLRERAEEVLALVARARA 591
FDTG+AAR L LPS A+ L +CG ADK+HQL DWRVRPLP ML YA +DTHYLL++ DRLR L G A+ VL++SR LC +RYEKE F P G+ VLQR G A L Q+ MAALW+WRDA AR EDES GYVMSAY+M R+A PAS DAL RC PLPPL+++R++EV+AL+A A A
Sbjct: 162 FDTGRAARTLDLPSRGLAYALKEFCGFEADKKHQLGDWRVRPLPPAMLKYAQADTHYLLHVYDRLRAML---GTPEAIAQVLESSRELCLQRYEKEAFDPEGWRRVLQRIGGE---GAGALDSAQQARMAALWDWRDALAREEDESPGYVMSAYLMLRLARAAPASHDALVRCAAPLPPLVQQRSDEVIALLAAAAA 352
BLAST of mRNA_P-wetherbeei_contig15235.1.1 vs. uniprot
Match: D8LQE8_ECTSI (HRDC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQE8_ECTSI) HSP 1 Score: 189 bits (481), Expect = 3.410e-52 Identity = 102/196 (52.04%), Postives = 128/196 (65.31%), Query Frame = 1
Query: 1 FDTGQAARYLGLPSFSYAHLLDRYCGVMADKRHQLSDWRVRPLPAEMLLYACSDTHYLLYIADRLRTELHARGGAVALRTVLDASRMLCGRRYEKEPFRPSGYDTVLQRQGHRLTAAAANLSGEQRRVMAALWEWRDATARREDESLGYVMSAYVMSRVAAVLPASADALGRCGNPLPPLLRERAEEVLALVARAR 588
FDTGQAAR LGLPSF AHLL+++C + DK+HQLSDWR+RPLPA+MLL +L GG VA++ VLDASR +C RR+EK F+ G+ VL+RQG + RRV++ALW WRD AR EDES GYVMSAYVM RVA P+S D L CGNPLP L+++ AE++L +V A+
Sbjct: 413 FDTGQAARQLGLPSFGLAHLLEKFCDFVPDKKHQLSDWRMRPLPADMLLI-----------------DLERSGGDVAVKAVLDASREICLRRFEKPAFQEKGWSEVLKRQGG--NGVLDDFGDVPRRVLSALWSWRDMIARAEDESYGYVMSAYVMIRVARKCPSSRDDLEGCGNPLPRLVQQHAEDILEIVENAK 589
BLAST of mRNA_P-wetherbeei_contig15235.1.1 vs. uniprot
Match: F6R4R6_CIOIN (HRDC domain-containing protein n=2 Tax=Ciona intestinalis TaxID=7719 RepID=F6R4R6_CIOIN) HSP 1 Score: 166 bits (419), Expect = 2.280e-47 Identity = 87/196 (44.39%), Postives = 120/196 (61.22%), Query Frame = 1
Query: 1 FDTGQAARYLGLPSFSYAHLLDRYCGVMADKRHQLSDWRVRPLPAEMLLYACSDTHYLLYIADRLRTELHARGGAVALRTVLDASRMLCGRRYEKEPFRPSGYDTVLQRQGHRLTAAAANLSGEQRRVMAALWEWRDATARREDESLGYVMSAYVMSRVAAVLPASADALGRCGNPLPPLLRERAEEVLALVARAR 588
FDTGQAAR LGL S +LL YC V ADK++QL+DWR+RPLP EMLLYA DTHYLLY+ D +R +L G L V+D SR +C +YEK + + +L++ H+ + +Q + ++ WRD AR+EDES GYV+ +++ ++A +LP A + C NP+PPLLR+ V LV AR
Sbjct: 87 FDTGQAARALGLQRHSLDYLLTHYCNVQADKKYQLADWRIRPLPKEMLLYAQGDTHYLLYVYDMMRLDLVKTGDPGLLHKVIDKSRDICCLKYEKPITNDTSHLVLLEK--HKRRGGKKDFRPQQIEALRLIFAWRDGLARQEDESCGYVLPNHMLLQIAEILPREAQGVLACCNPIPPLLRQHVLAVHQLVVEAR 280
BLAST of mRNA_P-wetherbeei_contig15235.1.1 vs. uniprot
Match: A0A0L0D0X9_THETB (Exosome component 10 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D0X9_THETB) HSP 1 Score: 174 bits (442), Expect = 4.510e-47 Identity = 98/198 (49.49%), Postives = 125/198 (63.13%), Query Frame = 1
Query: 1 FDTGQAARYLGLPSFSYAHLLDRYCGVMADKRHQLSDWRVRPLPAEMLLYACSDTHYLLYIADRLRTELHARGGAV--ALRTVLDASRMLCGRRYEKEPFRPSGYDTVLQRQGHRLTAAAANLSGEQRRVMAALWEWRDATARREDESLGYVMSAYVMSRVAAVLPASA-DALGRCGNPLPPLLRERAEEVLALVARA 585
FDTGQAAR L PSF AHLL YC V +K +QL+DWR+RPLP +M YA DTHYLLYI DRL+ EL ARG + VL SR +CG YEK F P + V +R ++ LS EQR V AAL++WRDA AR+ DES GYVM +++R+A +P D L C NP+PPL+R+ A +++ +V A
Sbjct: 346 FDTGQAARVLAYPSFGLAHLLKFYCSVNTNKSYQLADWRIRPLPEDMAKYARMDTHYLLYIYDRLKNELVARGSVSNNLVAAVLARSREICGFVYEKPAFTPDAWRRVYER-------SSTRLSSEQRAVFAALYDWRDAQARKLDESTGYVMPNALLARLAHAMPTRVGDLLAAC-NPIPPLVRQHAMDIVQVVVAA 535
BLAST of mRNA_P-wetherbeei_contig15235.1.1 vs. uniprot
Match: L8H2P3_ACACA (3'5' exonuclease domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H2P3_ACACA) HSP 1 Score: 167 bits (423), Expect = 1.840e-44 Identity = 92/199 (46.23%), Postives = 128/199 (64.32%), Query Frame = 1
Query: 1 FDTGQAARYLGLPSFSYAHLLDRYCGVMADKRHQLSDWRVRPLPAEMLLYACSDTHYLLYIADRLRTELHARGGAV--ALRTVLDASRMLCGRRYEKEPFRPSGYDTVLQRQGHRLTAAAANLSGEQRRVMAALWEWRDATARREDESLGYVMSAYVMSRVAAVLPASADALGRCGNPLPPLLRERAEEVLALVARARA 591
FDTGQA R L PSFS A+LL +CGV+ADK++QL+DWR+RPLP EML YA DTHYLL+I D+LR EL R + VL+ SR LC +YEK + P+ + ++ R + + +Q RV AA+++WRD AR EDES YV+ +++ +A ++P S AL C NP+PPL+R AE ++ ++ ARA
Sbjct: 357 FDTGQACRVLEYPSFSLAYLLRHHCGVLADKKYQLADWRIRPLPEEMLKYAREDTHYLLFIYDKLRNELIGRANMSNNLILAVLNRSRELCLLQYEKPLWTPTSHLSLYNRFNY-------VFNEQQMRVFAAVYKWRDTVAREEDESYRYVLPNHMLFHIAELVPTSVPALLACCNPVPPLVRINAEILVDVITAARA 548
BLAST of mRNA_P-wetherbeei_contig15235.1.1 vs. uniprot
Match: H2ZCV9_CIOSA (HRDC domain-containing protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2ZCV9_CIOSA) HSP 1 Score: 164 bits (416), Expect = 2.070e-44 Identity = 87/196 (44.39%), Postives = 122/196 (62.24%), Query Frame = 1
Query: 1 FDTGQAARYLGLPSFSYAHLLDRYCGVMADKRHQLSDWRVRPLPAEMLLYACSDTHYLLYIADRLRTELHARGGAVALRTVLDASRMLCGRRYEKEPFRPSGYDTVLQRQGHRLTAAAANLSGEQRRVMAALWEWRDATARREDESLGYVMSAYVMSRVAAVLPASADALGRCGNPLPPLLRERAEEVLALVARAR 588
FDTGQA+R LGL FS LL YC + ADK++QL+DWRVRPLP EMLLYA DTHYLLY+ D ++ +L + G L VL+ SR +C +YEK S + ++++Q R + + +Q + ++ WRD AR+EDES GYV+ +++ ++A +LP A + C NP+PPLLR+ V LV AR
Sbjct: 355 FDTGQASRALGLARFSLDFLLTHYCNIQADKKYQLADWRVRPLPKEMLLYAQGDTHYLLYVYDMMKIDL-LKAGTGMLEKVLEKSREICLLKYEKAVTTASSHLALMEKQKRR--GGKKDFNSQQLEALRLIYAWRDGLARQEDESCGYVLPNHMLLQIAEILPREAQGVLACCNPVPPLLRQHVLAVHQLVLEAR 547
BLAST of mRNA_P-wetherbeei_contig15235.1.1 vs. uniprot
Match: K1QSH5_CRAGI (Exosome component 10 (Fragment) n=1 Tax=Crassostrea gigas TaxID=29159 RepID=K1QSH5_CRAGI) HSP 1 Score: 157 bits (398), Expect = 4.940e-44 Identity = 83/198 (41.92%), Postives = 123/198 (62.12%), Query Frame = 1
Query: 1 FDTGQAARYLGLPSFSYAHLLDRYCGVMADKRHQLSDWRVRPLPAEMLLYACSDTHYLLYIADRLRTELHARGGAVA--LRTVLDASRMLCGRRYEKEPFRPSGYDTVLQRQGHRLTAAAANLSGEQRRVMAALWEWRDATARREDESLGYVMSAYVMSRVAAVLPASADALGRCGNPLPPLLRERAEEVLALVARAR 588
FDTGQAAR L FS AHL++ YC V+ DK++QL+DWR+RPLPAE++ YA DTHYL YI R++ EL ARG L +VL S +C + Y+K+ F+ Y L R+ ++ + Q + + L++WRD AR+EDES GYV+ +++ ++A +LP + C NP+PPL+R+ E+ + + AR
Sbjct: 110 FDTGQAARVLNHSRFSLAHLMEHYCDVITDKQYQLADWRIRPLPAELMKYAREDTHYLTYIYQRMKQELLARGNDQKNLLLSVLQRSTEICAKVYKKQVFKEDSY-LELYRKSKKV------FNSRQLQALQKLYQWRDKLARQEDESTGYVLPNHMILQIADILPREQQGIFACCNPIPPLVRQFLPEIHSFILEAR 300
BLAST of mRNA_P-wetherbeei_contig15235.1.1 vs. uniprot
Match: A0A7S4T666_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T666_9STRA) HSP 1 Score: 162 bits (409), Expect = 2.350e-43 Identity = 88/193 (45.60%), Postives = 121/193 (62.69%), Query Frame = 1
Query: 1 FDTGQAARYLGLPSFSYAHLLDRYCGVMADKRHQLSDWRVRPLPAEMLLYACSDTHYLLYIADRLRTELHARGGA-VALRTVLDASRMLCGRRYEKEPFRPSGYDTVLQRQGHRLTAAAANLSGEQRRVMAALWEWRDATARREDESLGYVMSAYVMSRVAAVLPASADALGRCGNPLPPLLRERAEEVLALV 576
FDTG+A+R L PS A+LL +Y GV+ADK+HQLSDWR RPLP +M YA SDT YLL I DRL+ EL V++ +VLD SR +C RY+KE F PSGY ++++ + + A + S +Q + AL++WRD AR EDES+ Y + R+A P + L NPLPPL+ ++EVL ++
Sbjct: 246 FDTGRASRMLKFPSAGLAYLLSKYAGVIADKKHQLSDWRQRPLPEDMKAYATSDTLYLLDIYDRLKLELDTNSNVDVSVESVLDTSRKICLIRYDKEAFCPSGYQSLMK--WKKRSKATTSFSTKQENTLKALYDWRDKVAREEDESVQYTCPNSALLRIATARPHNVITLQGLVNPLPPLVLRHSQEVLNVI 436
BLAST of mRNA_P-wetherbeei_contig15235.1.1 vs. uniprot
Match: A0A812X250_SYMMI (Exosc10 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812X250_SYMMI) HSP 1 Score: 160 bits (404), Expect = 4.200e-43 Identity = 86/190 (45.26%), Postives = 119/190 (62.63%), Query Frame = 1
Query: 1 FDTGQAARYLGLPSFSYAHLLDRYCGVMADKRHQLSDWRVRPLPAEMLLYACSDTHYLLYIADRLRTELHARGGAVALRTVLDASRMLCGRRYEKEPFRPSGYDTVL-QRQGHRLTAAAANLSGEQRRVMAALWEWRDATARREDESLGYVMSAYVMSRVAAVLPASADALGRCGNPLPPLLRERAEEVL 567
FDT AA+ L P+ S AHLL +CG+ +K+HQL+DWR+RPLP +ML YA SDTHYLLYI D LR +++ G AL V AS C +RYEKEPF P GY + +G AA ++S EQ +A+LW WRD+ ARREDES ++MS + R+ +P + ++L C +PL +R +++
Sbjct: 250 FDTYHAAKALRYPALSLAHLLKYHCGITLNKKHQLADWRIRPLPEDMLCYARSDTHYLLYIYDCLRRDIYTAQGVSALLAVWMASMHTCLKRYEKEPFYPLGYTRLFTDSRGWSGAPAAVDVSPEQHIALASLWSWRDSMARREDESPLFIMSNAELLRIGRAIPLTEESLLEC-SPLSAFVRAHMNDLM 438
BLAST of mRNA_P-wetherbeei_contig15235.1.1 vs. uniprot
Match: Q99KY7_MOUSE (Exosc10 protein (Fragment) n=1 Tax=Mus musculus TaxID=10090 RepID=Q99KY7_MOUSE) HSP 1 Score: 160 bits (404), Expect = 4.260e-43 Identity = 89/198 (44.95%), Postives = 121/198 (61.11%), Query Frame = 1
Query: 1 FDTGQAARYLGLPSFSYAHLLDRYCGVMADKRHQLSDWRVRPLPAEMLLYACSDTHYLLYIADRLRTELHARGG--AVALRTVLDASRMLCGRRYEKEPFRPSGYDTVLQRQGHRLTAAAANLSGEQRRVMAALWEWRDATARREDESLGYVMSAYVMSRVAAVLPASADALGRCGNPLPPLLRERAEEVLALVARAR 588
FDT QAAR L L S HLL YCGV ++K++QL+DWR+RPLP EML YA DTHYLLYI DR+R EL RG V L+ V SR +C +++ K F Y + ++Q +L+ +Q L+ WRD TARREDES GYV+ ++M ++A LP + C NP+PPL+R++ E+ L+ +AR
Sbjct: 17 FDTHQAARLLNLARHSLDHLLRLYCGVESNKQYQLADWRIRPLPEEMLSYARDDTHYLLYIYDRMRLELWERGNHQPVQLQVVWQRSRDICLKKFVKPIFTDESYLELYRKQ-------KKHLNSQQLTAFQLLFAWRDKTARREDESYGYVLPNHMMLKIAEELPKEPQGIIACCNPVPPLVRQQINEMHLLIQQAR 207 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15235.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15235.1.1 >prot_P-wetherbeei_contig15235.1.1 ID=prot_P-wetherbeei_contig15235.1.1|Name=mRNA_P-wetherbeei_contig15235.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=197bp FDTGQAARYLGLPSFSYAHLLDRYCGVMADKRHQLSDWRVRPLPAEMLLYback to top mRNA from alignment at P-wetherbeei_contig15235:2..592+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15235.1.1 ID=mRNA_P-wetherbeei_contig15235.1.1|Name=mRNA_P-wetherbeei_contig15235.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=591bp|location=Sequence derived from alignment at P-wetherbeei_contig15235:2..592+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15235:2..592+ >mRNA_P-wetherbeei_contig15235.1.1 ID=mRNA_P-wetherbeei_contig15235.1.1|Name=mRNA_P-wetherbeei_contig15235.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=591bp|location=Sequence derived from alignment at P-wetherbeei_contig15235:2..592+ (Phaeothamnion wetherbeei SAG_119_79)back to top |