mRNA_P-wetherbeei_contig15232.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15232.1.1
Unique NamemRNA_P-wetherbeei_contig15232.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15232.1.1 vs. uniprot
Match: A0A836CBQ1_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBQ1_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.220e-26
Identity = 170/453 (37.53%), Postives = 209/453 (46.14%), Query Frame = 1
Query:    4 KRHFKQIKKLSEGRG--------------------ASSRLRFMLQELMALRDNAWVPRREEEKAKTIRQVHQDIARETGTKISAIRG---------------------------------TTNAGASXXXXXXXXXXXXXXXXXXXXXEDDWVTVTTKTKPKGKA--------------------DDGRSAGGAG--------RMGGGATAXXXXXXXXXXXXXXXTAT----------GSAFAALGEGDRKKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVTVPAASPGGSAAAAGLTEAEVRRRGRDAFDEYAVGGDLDEAALCFRELQPAEHLWAVVAECANVVLERRDADRRALARLLAALASRGI---LGEG------DLRRGLSDVLEFLPDIEIDVPMATAYLAKMVGELLAAAALGPALLT 1062
            KR+FK+IKKLSE                       A+ RLRFML++L+ LR N WVPRR EEKAKT+ Q+H ++ARE G    A RG                                 ++  G+                      +D W TV  K K  G A                    D  R A  A         R+G G +A               +AT          GS FAAL  GD K            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      A           ++E E RR  + A +E +V GD+ EA LC RELQ  +H WA+V+E     LER+D DR A+  LL A  + G+    GEG      D+ RG +  ++FL D+EIDVPMA A+ AKM+G L+A  AL  +LLT
Sbjct:  258 KRYFKRIKKLSEDTEHVSRQVLWAPPQSSTVLQAHAALRLRFMLRDLVDLRSNDWVPRRAEEKAKTLAQIHNEVAREEGVAGDACRGCWGQWGMGSAEAKARKAGGDGRRHGSSVPSRPSSSGVGSGSQDVRSGGRSGYTPSAPAPVADDGWETVPAKGKRAGGAGEAAAARTEDCGVYRAVAHRDGARCAAVAALVLVLCAPRIGAGFSAAPNKAAKPSASGKSSSATSKPPRGTAAQGSGFAALAAGDDKSSSKRSSSKHKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARPD--------VSEEEARRVAKSAAEELSVAGDMAEALLCLRELQAPQHFWAMVSETVGQSLERKDKDRAAVLSLLKAAGAGGVGAPAGEGGFISQDDMARGCAAAVDFLSDLEIDVPMAGAHAAKMLGALVACGALPLSLLT 702          
BLAST of mRNA_P-wetherbeei_contig15232.1.1 vs. uniprot
Match: D8LKQ5_ECTSI (Eukaryotic initiation factor 4G n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ5_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 7.920e-15
Identity = 48/111 (43.24%), Postives = 65/111 (58.56%), Query Frame = 1
Query:  694 LTEAEVRRRGRDAFDEYAVGGDLDEAALCFRELQPAEHLWAVVAECANVVLERRDADRRALARLLAALASRGILGEGDLRRGLSDVLEFLPDIEIDVPMATAYLAKMVGEL 1026
            ++E   R++G+D   E+AV G+L EA  C  E+  AE  WA V+E  N   ER+   R AL  +LAA A  G L E  L +G  DVL+ +PD+ IDVP AT Y+A  +  L
Sbjct:  763 MSEEVARKKGKDVVAEFAVSGELGEACTCLMEID-AEVRWAAVSEAVNDSFERKQKHRDALGVVLAAGAKDGALSEEALLKGFGDVLDMVPDVCIDVPQATQYVASALAPL 872          
BLAST of mRNA_P-wetherbeei_contig15232.1.1 vs. uniprot
Match: A0A6H5L9P4_9PHAE (MI domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9P4_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 1.050e-14
Identity = 47/111 (42.34%), Postives = 66/111 (59.46%), Query Frame = 1
Query:  694 LTEAEVRRRGRDAFDEYAVGGDLDEAALCFRELQPAEHLWAVVAECANVVLERRDADRRALARLLAALASRGILGEGDLRRGLSDVLEFLPDIEIDVPMATAYLAKMVGEL 1026
            ++E   R++G+D   E+AV G+L EA  C +E+  AE  WA V+E  N   ER+   R AL  +LAA A  G L +  L +G  DVL+ +PD+ IDVP AT Y+A  +  L
Sbjct:  723 MSEEVARKKGKDVVAEFAVSGELGEACTCLKEID-AEVRWAAVSEAVNDSFERKQKHRDALGVVLAAGAKDGALSKEALLKGFGDVLDMVPDVCIDVPQATQYVASALAPL 832          
BLAST of mRNA_P-wetherbeei_contig15232.1.1 vs. uniprot
Match: A0A5D6Y9K0_9STRA (MI domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y9K0_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 2.620e-14
Identity = 46/116 (39.66%), Postives = 66/116 (56.90%), Query Frame = 1
Query:  694 LTEAEVRRRGRDAFDEYAVGGDLDEAALCFRELQPAEHLWAVVAECANVVLERRDADRRALARLLAALASRGILGEGDLRRGLSDVLEFLPDIEIDVPMATAYLAKMVGELLAAAA 1041
            L+     ++ +   DEY    DLDEA  CF EL  A H   + A+  NV LE+ D +R A+A  LA L  RG++   D+   L D+LEF  D+EID+P+   Y+A+MV   +A+ A
Sbjct:  851 LSAEAFEKKVKSILDEYVAMRDLDEAVACFAELASATHHARIAAQSLNVGLEKGDKERAAVASFLAGLHERGVVSTEDIAGPLHDLLEFAEDMEIDIPLTLQYVAEMVAPSVASGA 966          
BLAST of mRNA_P-wetherbeei_contig15232.1.1 vs. uniprot
Match: UPI000A2A92FA (eukaryotic translation initiation factor 4 gamma 1 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A92FA)

HSP 1 Score: 84.0 bits (206), Expect = 5.190e-14
Identity = 92/371 (24.80%), Postives = 144/371 (38.81%), Query Frame = 1
Query:   10 HFKQIKKLSEGRGASSRLRFMLQELMALRDNAWVPRREEEKAKTIRQVHQDIARETGTKISAIRGTTNAGASXXXXXXXXXXXXXXXXXXXXXEDDWVTVTTKTK-----PKGKADDGR----------SAGGAGRMGG----GATAXXXXXXXXXXXXXXXTATGSAFAALGEGDRK------------KKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVTVPAASPGGSAAAAGLTEAEVRRRGRDAFDEYAVGGDLDEAALCFRELQPAEHLWAVVAECANVVLERRDADRRALARLLAALASRGILGEGDLRRGLSDVLEFLPDIEIDVPMATAYLAKMVGELL 1029
            +F+Q+KK+   +  SSR RFMLQ+++ LR N WVPRR+E   KTI Q+H+++A E    + AI+ +                           ++ W TV  +T+     PK K  D +          S G  GR  G    G++                 + G+ F+ALG   R+            ++                                                    T P   P  S     L++ ++R +     DEY    DL EA  C  EL P+ H   +V  C N  LE+  ++R A+A+++  L    I+ E +   GL  +LEF  D+EID+P    Y  +++G L+
Sbjct:   49 YFEQMKKIIVQKKTSSRCRFMLQDVVDLRSNNWVPRRDENNPKTIDQIHKEVAEEEKKTMIAIQQSRQQ----KRDNPNKGRDSPRPSGVPQADETWTTVPGRTRNVNVDPK-KFQDAKKRTNVDTESISLGPGGRGPGAWARGSSGGVGPSAVPGTQNTEQESRGNRFSALGSEGRRGPGTSRQGSGAGRQDARNQGPPGRRPMHDREKALEAVRNVVQTKPRQEDRDTGSPRLEEVEPVKTPTPP--PPSVSPPVKQLSDEDIRHKAIGLADEYFGIKDLKEAKYCVEELDPSTH-QQLVYHCLNHCLEKHSSERLAIAKMMFYLRKNDIISEENYINGLKQLLEFAEDMEIDIPHVWKYFGELIGPLI 411          
BLAST of mRNA_P-wetherbeei_contig15232.1.1 vs. uniprot
Match: A0A7S2BR93_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BR93_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.180e-11
Identity = 122/349 (34.96%), Postives = 168/349 (48.14%), Query Frame = 1
Query:    1 VKRHFKQIKKLSEGRGASSRLRFMLQELMALRDNAWVPRREEEKAKTIRQVHQDIARETGTKISAIRG--TTNAGASXXXXXXXXXXXXXXXXXXXXXEDDWVTVTTKTKPKGKADDGRSAGGAGRMGGGAT-----AXXXXXXXXXXXXXXXTATGSAFAALGEGDRKKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVTVPAASPGGSAAAAGLTEAEVRRRGRDAFDEYAVGGDLDEAALCFRELQPAEHL-WAVVAECANVVLERRDADRRALARLLAALASRGILGEGDLRRGLSDVLEFLPDIEIDVPMATAYLAKMVGE 1023
            +K++ K++K L      SSR+RFM+++L+ +R N W  RREEE AKTI ++H D+ARE         G         XXXXXX                D W  V + +K  G+  D +      R G G       A                   +AF+A  + ++KKK XXXXXXXXXXXXXXXXXXXXXXXX           XXXXXXXXXXXXX             A A  +TE   R++     +EY   GD  EA  C +E+   +   W    +       +++ +   +  LL AL + G L    + +GL D++ FL DIE D PMA+ +L K++ +
Sbjct:  555 MKKYIKELKSLGGNMTLSSRIRFMIRDLLEMRLNNWTARREEESAKTIAEIHDDVAREEAANAGKGGGHKXXXXXXXXXXXXXGGSSRAVSAPAKPAESDGWEMVPSTSK--GRRHDSQDVRRDDRSGQGNRNQRNPAPDKNSPVNRNASGFSAVGNNAFSAFNQDEKKKKKXXXXXXXXXXXXXXXXXXXXXXXXAASKVAAQPKAXXXXXXXXXXXXXXXX----------AKAVKMTEELFRKKSEGIIEEYIFSGDAKEATECVQEMGSMDEFGWKFATDAIEKAFNKKEKEVIMIGDLLVALNAAGALSTAQIEKGLFDLIPFLKDIECDTPMASRWLGKIMAK 891          
BLAST of mRNA_P-wetherbeei_contig15232.1.1 vs. uniprot
Match: A0A1Y1Z773_9FUNG (MI domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z773_9FUNG)

HSP 1 Score: 76.6 bits (187), Expect = 1.740e-11
Identity = 82/356 (23.03%), Postives = 134/356 (37.64%), Query Frame = 1
Query:   10 HFKQIKKLSEGRGASSRLRFMLQELMALRDNAWVPRREEEKAKTIRQVHQDIARETGTKISAIRGTTNAGASXXXXXXXXXXXXXXXXXXXXXE----DDWVTV-----------------TTKTKPKGKADDGRSAGGAGRMGGGATAXXXXXXXXXXXXXXXTATGSAFAALGEGDRKKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVTVPAASPGGSAAAAGLTEAEVRRRGRDAFDEYAVGGDLDEAALCFRELQPAEHLWAVVAECANVVLERRDADRRALARLLAALASRGILGEGDLRRGLSDVLEFLPDIEIDVPMATAYLAKM 1014
            +F+++K++S  +  +SR+RFML +++ LR N WVPRRE    KTI Q+HQD  ++       ++ T ++G                            D W TV                  T++K       G   G  G +GGG+                   +G+ F+AL   +  +K                                                  +V VP  +    A  A LT+ +   + +   +EY    D+ E   C +EL   E    VV+E  N  L+++  D  A+ +L   L+S  ++       G+ +V+EFL DI IDVP A +++  M
Sbjct: 1025 YFQRMKEMSVNKKLNSRIRFMLLDVIDLRSNKWVPRREVAGPKTISQIHQDAQKQKEENAEMLKKTASSGGRLPPINQQLSRANSERRERRGPPGQGPDGWNTVGNAPSSRKTGDLTAFGNLTRSKSGANVSLGPGGGVFGALGGGSKGWKSSEAKGKEEPKPKPPSGNMFSALMSSESPRKEDKPFERKPLNLRPR-----------------------------------SVPVPEET---KAEEAKLTKEQAEPKVKAMVEEYLSVQDVPEVITCIKELGSDEFHSLVVSEFINEALDKKQKDIDAVIKLFKKLSSEEVISRESYVAGIVEVMEFLEDIAIDVPQAYSHMGAM 1342          
BLAST of mRNA_P-wetherbeei_contig15232.1.1 vs. uniprot
Match: A0A7S2FBL7_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FBL7_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 3.190e-11
Identity = 121/340 (35.59%), Postives = 166/340 (48.82%), Query Frame = 1
Query:   52 SSRLRFMLQELMALRDNAWVPRREEEKAKTIRQVHQDIARETGTKISAIRGTTNAGASXXXXXXXXXXXXXXXXXXXXXEDDWVTVTTKTKPKGKADDGRSAGGAGRMGGGATAXXXXXXXXXXXXXXXTATGSA---FAALGEGDRKKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVTVPAASPG------GSAAAAGLTEAEVRRRGRDAFDEYAVGGDLDEAALCFRELQPAEHLWAVVAECANVVLERRDADRRALARLLAALASRGILGEGDLRRGLSDVLEFLPDIEIDVPMATAYLAKMVGELLAAAAL 1044
            +SR+RFM+++L+ +R N W  RRE EKAKTI ++H+D AR+                          XXXXXX       DD   V    +      DG +  G          XXXXXXXXXXXX   + +G +   FAAL  G+ K +    XXXXXXXXXXXXXXXXXXXXXXXXX                         P ASP        SAA   + E   + + +   +EY    D+ EA  C +EL   +H W +V E  ++   ++  +   +  L   L + G+L    L +GL D++EFL DIEIDVP+A  +LA ++ + + + AL
Sbjct:  261 NSRIRFMIKDLLEMRANGWTARRETEKAKTIAEIHEDAARDEAKAAKGXXXXXXXXXXRGSVASQMKXXXXXXSGGAPKADDGWEVPKNARRVATDADGWATVGXXXXXXXXXXXXXXXXXXXXXXQGKSPSGGSMGGFAALNSGNSKAEKEKKXXXXXXXXXXXXXXXXXXXXXXXXXSPTASEGATDFS-------------PPASPNKDSPSKASAAGGAMDEKTFKTKAKSIVEEYFSIVDMKEATECVQELASPDHHWCLVTESIDIAFGKKQKECEMVGELFVGLNAAGVLTTEQLEKGLFDLIEFLTDIEIDVPLAGKWLAIVMAKCVISGAL 587          
BLAST of mRNA_P-wetherbeei_contig15232.1.1 vs. uniprot
Match: A0A8B6HLF3_MYTGA (Translation initiation factor 4G n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6HLF3_MYTGA)

HSP 1 Score: 75.1 bits (183), Expect = 4.670e-11
Identity = 90/365 (24.66%), Postives = 136/365 (37.26%), Query Frame = 1
Query:    1 VKRHFKQIKKLSEGRGASSRLRFMLQELMALRDNAWVPRREEEKAKTIRQVHQDIARETGTKISAIRGT-----TNAGASXXXXXXXXXXXXXXXXXXXXXEDDWVTVTTKTKPKGKA---DDGR---------------SAGGAGRMGGGATAXXXXXXXXXXXXXXXTATGSAFAALG--EGDRKKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVTVPAASPGGSAAAAGLTEAEVRRRGRDAFDEYAVGGDLDEAALCFRELQPAEHLWAVVAECANVVLERRDADRRALARLLAALASRGILGEGDLRRGLSDVLEFLPDIEIDVPMATAYLAKMVG 1020
            V ++F+++ K+ E +  SSR+RFMLQ+++ LR + WVPRR+E   KTI Q+H++  +E   K   ++       +  G      XXX               D W TV      +G+    D  R                 GGAGR  G                      G+ F+AL   E + + +                                                      P        A+  LTEAE+ ++ +   DEY    D+ EA +C  EL         V+EC N VLER    RR    LL  L  + I+ +    +GL+ VL +  D+EID+P    Y  +++G
Sbjct:  183 VDQYFQRMHKVIEEKKTSSRVRFMLQDVLELRMSNWVPRRDESNPKTIEQIHKEAQQEAQEKQLLVQSLNTQAKSGGGGGRGGRXXXGPRLGRDAGSMGATPDGWSTVAGPPSRRGERQTIDPARLRLSKQNVDENIQLGPGGGAGRFAG--WQRGSSGGGARTSQEAEKTPGNRFSALSKPEDEGRSRYGVSPARDGGRGGRGFGKATRSIAGGQTTPREGPSRESSRGREPRESSLKEPEKPVE------ASVELTEAEMVKKAKAILDEYLHLQDIKEALICVEELNCPSLNHVFVSECINQVLERSTVARRHTGLLLHDLVKKPIITDKQYLQGLNSVLAYAEDMEIDIPKIYQYFGELIG 539          
BLAST of mRNA_P-wetherbeei_contig15232.1.1 vs. uniprot
Match: A0A140D2S1_MYTGA (eIF4G (Fragment) n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A140D2S1_MYTGA)

HSP 1 Score: 73.2 bits (178), Expect = 2.410e-10
Identity = 92/382 (24.08%), Postives = 137/382 (35.86%), Query Frame = 1
Query:    1 VKRHFKQIKKLSEGRGASSRLRFMLQELMALRDNAWVPRREEEKAKTIRQVHQDIARETGTKISAIRGT-----TNAGASXXXXXXXXXXXXXXXXXXXXXEDDWVTVTTKTKPKGKA---DDGR---------------SAGGAGRMGGGATAXXXXXXXXXXXXXXXTATGSAFAALGEGDRKKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVTVPAASPGGSA-------------------AAAGLTEAEVRRRGRDAFDEYAVGGDLDEAALCFRELQPAEHLWAVVAECANVVLERRDADRRALARLLAALASRGILGEGDLRRGLSDVLEFLPDIEIDVPMATAYLAKMVG 1020
            V ++F+++ K+ E +  SSR+RFMLQ+++ LR + WVPRR+E   KTI Q+H++  +E   K   ++       +  G      XXX               D W TV      +G+    D  R                 GGAGR  G                      G+ F+AL     K +                                                    T P   P   +                   A+  LTEAE+ ++ +   DEY    D+ EA +C  EL         V+EC N VLER    RR    LL  L  + I+ +    +GL+ VL +  D+EID+P    Y  +++G
Sbjct: 1042 VDQYFQRMHKVIEEKKTSSRVRFMLQDVLELRMSNWVPRRDESNPKTIEQIHKEAQQEAQEKQLLVQSLNTQAKSGGGGGRGGRXXXGPRLGRDAGSMGATPDGWSTVAGPPSRRGERQTIDPARLRLSKQNVDENIQLGPGGGAGRFAG--WQRGSSGGGARTSQEAEKTPGNRFSALS----KPEDEGRSRYGVSPARDGGRGGRGFGRPVRVSQRASQEQEKESALAAARSIAGGQTTPREGPSRESSRGREPRESSLKEPEKPVEASVELTEAEMVKKAKAILDEYLHLQDIKEALICVEELNCPSLNHVFVSECINQVLERSTVARRHTGLLLHDLVKKPIITDKQYLQGLNSVLAYAEDMEIDIPKIYQYFGELIG 1417          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15232.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CBQ1_9STRA1.220e-2637.53Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
D8LKQ5_ECTSI7.920e-1543.24Eukaryotic initiation factor 4G n=1 Tax=Ectocarpus... [more]
A0A6H5L9P4_9PHAE1.050e-1442.34MI domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A5D6Y9K0_9STRA2.620e-1439.66MI domain-containing protein (Fragment) n=1 Tax=Py... [more]
UPI000A2A92FA5.190e-1424.80eukaryotic translation initiation factor 4 gamma 1... [more]
A0A7S2BR93_9STRA1.180e-1134.96Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1Y1Z773_9FUNG1.740e-1123.03MI domain-containing protein n=1 Tax=Basidiobolus ... [more]
A0A7S2FBL7_9STRA3.190e-1135.59Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
A0A8B6HLF3_MYTGA4.670e-1124.66Translation initiation factor 4G n=1 Tax=Mytilus g... [more]
A0A140D2S1_MYTGA2.410e-1024.08eIF4G (Fragment) n=1 Tax=Mytilus galloprovincialis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15232contigP-wetherbeei_contig15232:11..1306 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LKQ5
PFAMsMA3,MIF4G,eIF_4G1
Model size1062
Max annot lvl2759|Eukaryota
KEGG koko:K03260
KEGG Pathwayko03013,ko05416,map03013,map05416
KEGG ModuleM00428
Hectar predicted targeting categoryother localisation
GOsGO:0000932,GO:0002181,GO:0002183,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003743,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010494,GO:0016043,GO:0016281,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0031369,GO:0032991,GO:0034063,GO:0034622,GO:0034641,GO:0034645,GO:0035770,GO:0036464,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
Exons3
Evalue1.3e-15
EggNOG OGsKOG0401@1|root,KOG0401@2759|Eukaryota
Descriptiontranslation initiation factor activity
Cds size1062
COG categoryS
BRITEko00000,ko00001,ko00002,ko03012,ko03019
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186048.9953396-CDS-P-wetherbeei_contig15232:10..2511683186048.9953396-CDS-P-wetherbeei_contig15232:10..251Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15232 11..251 +
1683186049.0056248-CDS-P-wetherbeei_contig15232:353..7571683186049.0056248-CDS-P-wetherbeei_contig15232:353..757Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15232 354..757 +
1683186049.0145504-CDS-P-wetherbeei_contig15232:889..13061683186049.0145504-CDS-P-wetherbeei_contig15232:889..1306Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15232 890..1306 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15232.1.1prot_P-wetherbeei_contig15232.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15232 11..1306 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15232.1.1

>prot_P-wetherbeei_contig15232.1.1 ID=prot_P-wetherbeei_contig15232.1.1|Name=mRNA_P-wetherbeei_contig15232.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=354bp
VKRHFKQIKKLSEGRGASSRLRFMLQELMALRDNAWVPRREEEKAKTIRQ
VHQDIARETGTKISAIRGTTNAGASSSGGGGGGDAAAAAGGAAAAGEDDW
VTVTTKTKPKGKADDGRSAGGAGRMGGGATAGRGGGGDATRRPTGGTATG
SAFAALGEGDRKKKKEKDERRERKDRKDSKDRDRGDKDRGDRRDKKDRDK
REHRKDSSKLSKLAAVTVPAASPGGSAAAAGLTEAEVRRRGRDAFDEYAV
GGDLDEAALCFRELQPAEHLWAVVAECANVVLERRDADRRALARLLAALA
SRGILGEGDLRRGLSDVLEFLPDIEIDVPMATAYLAKMVGELLAAAALGP
ALLT
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mRNA from alignment at P-wetherbeei_contig15232:11..1306+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15232.1.1 ID=mRNA_P-wetherbeei_contig15232.1.1|Name=mRNA_P-wetherbeei_contig15232.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1296bp|location=Sequence derived from alignment at P-wetherbeei_contig15232:11..1306+ (Phaeothamnion wetherbeei SAG_119_79)
GTGAAGCGGCACTTCAAGCAGATCAAGAAGCTGAGCGAGGGCCGCGGCGC CAGCAGCCGCCTGCGCTTCATGCTGCAGGAGCTCATGGCGCTGCGGGACA ATGCCTGGGTGCCGCGCCGCGAGGAGGAGAAGGCCAAAACCATCCGCCAG GTCCACCAAGACATCGCCCGCGAGACGGGAACCAAGATCAGCGCCATCCG CGGTACCACGAACGCCGGCGCCAGCAGTAGCGGCGGCGGGGGTGGCTCCG GGGCCGGCGGGAGTGGCGGTGGCGGCGGCCGCGCAAAGAAGGCCGGGCCT GCCGGCGGTGGGGGCGATGCCGCCGCCGCGGCGGCATCTGCAGGCGGCGG CGACGCAGCGGCGGCGGCGGGCGGTGCTGCTGCTGCGGGAGAGGATGATT GGGTGACCGTCACCACCAAGACTAAGCCGAAGGGGAAGGCGGATGACGGC CGGAGCGCGGGAGGCGCTGGACGGATGGGCGGTGGAGCTACAGCGGGTCG CGGGGGCGGCGGCGACGCGACGCGGCGGCCGACCGGCGGGACGGCGACTG GATCGGCATTTGCTGCGCTTGGCGAGGGGGACCGCAAGAAGAAGAAAGAG AAGGACGAACGACGCGAGCGAAAAGACCGGAAGGACAGCAAGGACCGCGA TCGGGGGGATAAGGACCGCGGGGACCGGCGCGACAAAAAGGACCGCGACA AAAGGGAGCACAGGAAGGACAGCTCCAAGCTTTCCAAGCTGGCGGCGGTG GCTGTGGCGGAGTCGCTGGCTCCCAAGGGCGAGGGCGGGTCCTCAGACGG GTCGGCGGCGGCGGCCGCCGCCGTCGCAGCCGGTAGCGGGGCGGAGGAGC CGCTGGCGGCGGTGCCGGAGGACGCTGAGGTGACGGTCCCGGCGGCCAGC CCCGGCGGCTCGGCAGCGGCCGCGGGGCTGACCGAGGCGGAGGTCCGGAG ACGCGGCCGCGACGCGTTTGACGAGTACGCCGTCGGCGGCGACCTCGACG AGGCGGCATTGTGCTTCAGGGAGCTGCAGCCGGCGGAGCACCTCTGGGCC GTCGTCGCCGAGTGCGCCAACGTCGTCCTGGAGCGACGCGACGCCGACCG GCGGGCGCTGGCGCGGCTGCTGGCAGCGCTGGCGTCGCGCGGCATCCTCG GGGAAGGCGACCTGCGGCGCGGGCTCTCTGACGTGCTCGAGTTCCTTCCC GACATCGAAATCGACGTTCCGATGGCGACGGCCTACCTGGCGAAGATGGT CGGCGAGCTGCTGGCGGCGGCGGCGCTGGGGCCGGCGCTGCTGACT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15232:11..1306+

>mRNA_P-wetherbeei_contig15232.1.1 ID=mRNA_P-wetherbeei_contig15232.1.1|Name=mRNA_P-wetherbeei_contig15232.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1062bp|location=Sequence derived from alignment at P-wetherbeei_contig15232:11..1306+ (Phaeothamnion wetherbeei SAG_119_79)
GTGAAGCGGCACTTCAAGCAGATCAAGAAGCTGAGCGAGGGCCGCGGCGC
CAGCAGCCGCCTGCGCTTCATGCTGCAGGAGCTCATGGCGCTGCGGGACA
ATGCCTGGGTGCCGCGCCGCGAGGAGGAGAAGGCCAAAACCATCCGCCAG
GTCCACCAAGACATCGCCCGCGAGACGGGAACCAAGATCAGCGCCATCCG
CGGTACCACGAACGCCGGCGCCAGCAGTAGCGGCGGCGGGGGCGGCGGCG
ACGCAGCGGCGGCGGCGGGCGGTGCTGCTGCTGCGGGAGAGGATGATTGG
GTGACCGTCACCACCAAGACTAAGCCGAAGGGGAAGGCGGATGACGGCCG
GAGCGCGGGAGGCGCTGGACGGATGGGCGGTGGAGCTACAGCGGGTCGCG
GGGGCGGCGGCGACGCGACGCGGCGGCCGACCGGCGGGACGGCGACTGGA
TCGGCATTTGCTGCGCTTGGCGAGGGGGACCGCAAGAAGAAGAAAGAGAA
GGACGAACGACGCGAGCGAAAAGACCGGAAGGACAGCAAGGACCGCGATC
GGGGGGATAAGGACCGCGGGGACCGGCGCGACAAAAAGGACCGCGACAAA
AGGGAGCACAGGAAGGACAGCTCCAAGCTTTCCAAGCTGGCGGCGGTGAC
GGTCCCGGCGGCCAGCCCCGGCGGCTCGGCAGCGGCCGCGGGGCTGACCG
AGGCGGAGGTCCGGAGACGCGGCCGCGACGCGTTTGACGAGTACGCCGTC
GGCGGCGACCTCGACGAGGCGGCATTGTGCTTCAGGGAGCTGCAGCCGGC
GGAGCACCTCTGGGCCGTCGTCGCCGAGTGCGCCAACGTCGTCCTGGAGC
GACGCGACGCCGACCGGCGGGCGCTGGCGCGGCTGCTGGCAGCGCTGGCG
TCGCGCGGCATCCTCGGGGAAGGCGACCTGCGGCGCGGGCTCTCTGACGT
GCTCGAGTTCCTTCCCGACATCGAAATCGACGTTCCGATGGCGACGGCCT
ACCTGGCGAAGATGGTCGGCGAGCTGCTGGCGGCGGCGGCGCTGGGGCCG
GCGCTGCTGACT
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