mRNA_P-wetherbeei_contig15224.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15224.2.1 vs. uniprot
Match: A0A7C4XL02_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XL02_9HYPH) HSP 1 Score: 157 bits (396), Expect = 2.650e-47 Identity = 74/116 (63.79%), Postives = 95/116 (81.90%), Query Frame = 1
Query: 1 MRTFMIAYDLARPAGHKHAMATIIMSLGSSWARPLEQTWYVRSDLNETEIEARLAHLLDDEDGMIVQSVAEEGVMTNTQLRWFRQRRPAFELEQGGNVVAFPSVPQVAGAQAELPL 348
M+TF+I+YDLA+P +KHA+AT IM LGSSWARPLE TWYVR+D+ E++I ARLA LDD+DG++VQ+V EE + NT LRWFRQRRP F++E G N++AFP+V +A AQ ELPL
Sbjct: 1 MQTFLISYDLAKPTRNKHALATAIMGLGSSWARPLECTWYVRADVAESQIAARLAAFLDDDDGLLVQAVEEEATLANTSLRWFRQRRPGFDIEAGSNILAFPAVAAMAPAQQELPL 116
BLAST of mRNA_P-wetherbeei_contig15224.2.1 vs. uniprot
Match: A0A7Y4XKP5_HYPSQ (Uncharacterized protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A7Y4XKP5_HYPSQ) HSP 1 Score: 136 bits (343), Expect = 2.900e-39 Identity = 64/119 (53.78%), Postives = 86/119 (72.27%), Query Frame = 1
Query: 1 MRTFMIAYDLARPAGHKHAMATIIMSLGSSWARPLEQTWYVRSDLNETEIEARLAHLLDDEDGMIVQSVAEEGVMTNTQLRWFRQRRPAFELEQGGNVVAFPSVPQVAGAQAELPLAAA 357
MRT++I+YDLA+P ++H +A +IM LG WARPL TWYV SD +E E+EA L LL ++DG+++Q+V + V+TNT LRWFRQRR +L GGNV+AFP+ P A+ ELP A A
Sbjct: 1 MRTYLISYDLAKPNRNQHVLAQVIMGLGDKWARPLSNTWYVASDRDEVELEADLKDLLAEDDGLVIQAVKRDAVLTNTSLRWFRQRRAGLDLVAGGNVIAFPAPPAAEPAEPELPFAEA 119
BLAST of mRNA_P-wetherbeei_contig15224.2.1 vs. uniprot
Match: UPI0015E642CB (hypothetical protein n=1 Tax=Hyphomicrobium methylovorum TaxID=84 RepID=UPI0015E642CB) HSP 1 Score: 136 bits (342), Expect = 4.110e-39 Identity = 63/119 (52.94%), Postives = 86/119 (72.27%), Query Frame = 1
Query: 1 MRTFMIAYDLARPAGHKHAMATIIMSLGSSWARPLEQTWYVRSDLNETEIEARLAHLLDDEDGMIVQSVAEEGVMTNTQLRWFRQRRPAFELEQGGNVVAFPSVPQVAGAQAELPLAAA 357
MRT++I+YDLA+P ++H +A +IM LG WARPL TWYV SD +ET++EA L LL ++DG+++Q+ + V+TNT LRWFRQRR AF+L GNV+AFP+ P + ELP A A
Sbjct: 1 MRTYLISYDLAKPNRNQHVLAQVIMGLGDKWARPLVNTWYVASDRDETDLEAELRELLSEDDGLLIQATKRDAVLTNTSLRWFRQRRAAFDLAPDGNVIAFPAPPMPEPVEPELPFAEA 119
BLAST of mRNA_P-wetherbeei_contig15224.2.1 vs. uniprot
Match: A0A2S5MX66_HYPSQ (Uncharacterized protein n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=A0A2S5MX66_HYPSQ) HSP 1 Score: 132 bits (332), Expect = 1.490e-37 Identity = 67/122 (54.92%), Postives = 87/122 (71.31%), Query Frame = 1
Query: 1 MRTFMIAYDLARPAGHKHAMATIIMSLGSSWARPLEQTWYVRSDLNETEIEARLAHLLDDEDGMIVQSVAEEGVMTNTQLRWFRQRRPAFELEQGGNVVAFPSVPQVAGAQA---ELPLAAA 357
MRT++I+YDLA+P KH +A IMSLGSSWARPLE TWYVRSD +E +EA L L+ +DG+++Q V E+ VMTNT LRWFRQRR ++ + N++AFP V +AG + ELP A A
Sbjct: 1 MRTYLISYDLAKPHVSKHVVAHAIMSLGSSWARPLENTWYVRSDESEETLEAWLGRYLESDDGLLIQPVKEDAVMTNTSLRWFRQRRAGIDVSEHTNIIAFPVVAPLAGERTDEPELPFATA 122
BLAST of mRNA_P-wetherbeei_contig15224.2.1 vs. uniprot
Match: A0A433B095_HYPSQ (Uncharacterized protein n=4 Tax=Hyphomicrobium TaxID=81 RepID=A0A433B095_HYPSQ) HSP 1 Score: 131 bits (329), Expect = 4.140e-37 Identity = 65/122 (53.28%), Postives = 85/122 (69.67%), Query Frame = 1
Query: 1 MRTFMIAYDLARPAGHKHAMATIIMSLGSSWARPLEQTWYVRSDLNETEIEARLAHLLDDEDGMIVQSVAEEGVMTNTQLRWFRQRRPAFELEQGGNVVAFPSVPQVAGAQA---ELPLAAA 357
MRT++I+YDLA+P ++H +A +IM LG WARPL TWYV SD E E+E L LL +EDG+++Q+ E VMTNT LRWFRQRRP +L GN++AFP +P +A A+ ELP A A
Sbjct: 1 MRTYLISYDLAQPNRNQHVLAQVIMGLGDKWARPLSNTWYVTSDREEFELETELRELLAEEDGLLIQATKREAVMTNTSLRWFRQRRPGLDLAPDGNIIAFP-LPAIAAAEPMEPELPFAKA 121
BLAST of mRNA_P-wetherbeei_contig15224.2.1 vs. uniprot
Match: A0A6I3KKY3_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobium album TaxID=2665159 RepID=A0A6I3KKY3_9HYPH) HSP 1 Score: 130 bits (326), Expect = 1.110e-36 Identity = 65/119 (54.62%), Postives = 85/119 (71.43%), Query Frame = 1
Query: 1 MRTFMIAYDLARPAGHKHAMATIIMSLGSSWARPLEQTWYVRSDLNETEIEARLAHLLDDEDGMIVQSVAEEGVMTNTQLRWFRQRRPAFELEQGGNVVAFPSVPQVAGAQAELPLAAA 357
MRT +I+YDLA+P +KH +A IM++G+SWARPLEQTWYVR+D E EIEA+L LD +DG+++Q+ +E V+TNT LRWFRQRR ++ NV+AFP Q ELPLA A
Sbjct: 1 MRTLIISYDLAQPHRNKHVLAHHIMAIGNSWARPLEQTWYVRTDATEEEIEAQLRGALDPDDGLLIQATRDEAVLTNTALRWFRQRRAGVDMGGDSNVLAFPMPKPFIDDQQELPLAEA 119
BLAST of mRNA_P-wetherbeei_contig15224.2.1 vs. uniprot
Match: A0A2P5KWI6_HYPSQ (Uncharacterized protein n=2 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2P5KWI6_HYPSQ) HSP 1 Score: 129 bits (324), Expect = 2.250e-36 Identity = 62/120 (51.67%), Postives = 82/120 (68.33%), Query Frame = 1
Query: 1 MRTFMIAYDLARPAGHKHAMATIIMSLGSSWARPLEQTWYVRSDLNETEIEARLAHLLDDEDGMIVQSVAEEGVMTNTQLRWFRQRRPAFELEQGGNVVAFPSVPQVAGAQAELPLAAAS 360
MRTF+++YDLA+P +KH +A IM LG WARPLE TWYV ++ E+E RL+ LLD +DG+++Q V +M+NT LRWFRQRR ++ GNV+AFPS P + ELP A AS
Sbjct: 1 MRTFLVSYDLAKPNRNKHVIAQEIMGLGERWARPLESTWYVEGRVSAVEMERRLSELLDTDDGLLIQQVENTALMSNTSLRWFRQRRAGIDITPDGNVIAFPSPPAPEPMEPELPFARAS 120
BLAST of mRNA_P-wetherbeei_contig15224.2.1 vs. uniprot
Match: N0B7T0_9HYPH (Uncharacterized protein n=3 Tax=Hyphomicrobium TaxID=81 RepID=N0B7T0_9HYPH) HSP 1 Score: 129 bits (323), Expect = 3.380e-36 Identity = 62/121 (51.24%), Postives = 83/121 (68.60%), Query Frame = 1
Query: 1 MRTFMIAYDLARPAGHKHAMATIIMSLGSSWARPLEQTWYVRSDLNETEIEARLAHLLDDEDGMIVQSVAEEGVMTNTQLRWFRQRRPAFELEQGGNVVAFPSVPQVAGA--QAELPLAAA 357
MRT++I+YDLA+P ++H +A +IM LG WARPL TWYV S+ E E+EA L LL +EDG+++Q+ + V+TNT LRWFRQRRP +L GN++AFPS P + ELP A A
Sbjct: 1 MRTYLISYDLAKPNRNQHVLAQLIMCLGDKWARPLVNTWYVMSEREEVELEAELRELLTEEDGLLIQATKRDAVLTNTSLRWFRQRRPGLDLAPDGNIIAFPSPPAPVSEPLEPELPFARA 121
BLAST of mRNA_P-wetherbeei_contig15224.2.1 vs. uniprot
Match: A0A6I0ETY1_HYPSQ (Uncharacterized protein n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=A0A6I0ETY1_HYPSQ) HSP 1 Score: 128 bits (321), Expect = 6.420e-36 Identity = 64/119 (53.78%), Postives = 84/119 (70.59%), Query Frame = 1
Query: 1 MRTFMIAYDLARPAGHKHAMATIIMSLGSSWARPLEQTWYVRSDLNETEIEARLAHLLDDEDGMIVQSVAEEGVMTNTQLRWFRQRRPAFELEQGGNVVAFPSVPQVAGAQAELPLAAA 357
MRT +I+YDLA+P +KH +A IM++G SWARPLEQTWY+R++ E +IEA+L LLD +DG+++Q+ +E V+TNT LRWFRQRR E NV+AFP Q ELPLA A
Sbjct: 1 MRTLIISYDLAQPHRNKHILAQQIMAIGQSWARPLEQTWYLRTEAREEQIEAQLRGLLDPDDGLLIQATRDEAVLTNTALRWFRQRRAGVETGGDTNVIAFPMPAPFVDDQQELPLAEA 119
BLAST of mRNA_P-wetherbeei_contig15224.2.1 vs. uniprot
Match: A0A2S5MB06_HYPSQ (Uncharacterized protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5MB06_HYPSQ) HSP 1 Score: 127 bits (319), Expect = 1.290e-35 Identity = 59/119 (49.58%), Postives = 82/119 (68.91%), Query Frame = 1
Query: 1 MRTFMIAYDLARPAGHKHAMATIIMSLGSSWARPLEQTWYVRSDLNETEIEARLAHLLDDEDGMIVQSVAEEGVMTNTQLRWFRQRRPAFELEQGGNVVAFPSVPQVAGAQAELPLAAA 357
MRT++I+YDLA+P ++H +A +IM LG WARPL TWYV S L E E+EA + LL ++DG+++Q+V E V+TNT LRWFRQRR ++ N++AFP+ P + ELP A A
Sbjct: 1 MRTYLISYDLAKPNRNQHVLAQVIMGLGEKWARPLSNTWYVSSVLEEFELEAEMKDLLGEDDGLVIQAVKREAVLTNTSLRWFRQRRAGLDIAPDSNIIAFPAPPAPEPMEPELPFAKA 119 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15224.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15224.2.1 >prot_P-wetherbeei_contig15224.2.1 ID=prot_P-wetherbeei_contig15224.2.1|Name=mRNA_P-wetherbeei_contig15224.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=121bp MRTFMIAYDLARPAGHKHAMATIIMSLGSSWARPLEQTWYVRSDLNETEIback to top mRNA from alignment at P-wetherbeei_contig15224:1094..1456- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15224.2.1 ID=mRNA_P-wetherbeei_contig15224.2.1|Name=mRNA_P-wetherbeei_contig15224.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=363bp|location=Sequence derived from alignment at P-wetherbeei_contig15224:1094..1456- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15224:1094..1456- >mRNA_P-wetherbeei_contig15224.2.1 ID=mRNA_P-wetherbeei_contig15224.2.1|Name=mRNA_P-wetherbeei_contig15224.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=363bp|location=Sequence derived from alignment at P-wetherbeei_contig15224:1094..1456- (Phaeothamnion wetherbeei SAG_119_79)back to top |