mRNA_P-wetherbeei_contig152.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig152.6.1
Unique NamemRNA_P-wetherbeei_contig152.6.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig152.6.1 vs. uniprot
Match: A0A662WUX6_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WUX6_9STRA)

HSP 1 Score: 102 bits (254), Expect = 3.110e-23
Identity = 83/182 (45.60%), Postives = 100/182 (54.95%), Query Frame = 1
Query:   16 GARVLELGAGVGIAGMLAARLRAAEVALTDGDACCVPLLAKSAKDNGLANVVAAR-LLWGDAKSTADECHTADAAASGASPPPMPLFNVILAGDVLYKPDLIDPLLTTAAAFLAPRGT---FLLCHIPRAGVTHDTVAAALAAAGFAFE-AHRPSGDGVRA----EMCA-EDAARAMLYTAT 531
            G RVLELGAG GI  ++A +L AA    TDGDA  V LLAK+ + NG  +VV AR L WGD  ST  E   A+       P      +V+LAGDVLYK +L+  L  T    LA   +   F+LCH+PRA VTHD V   + A+G  FE    P+ D V A    E C  ED  RA LY  T
Sbjct:  108 GKRVLELGAGTGICSIVAFKLGAARCLATDGDAEVVELLAKNVEVNGAVDVVTARSLFWGDEAST--ETLLAEI------PDAFAATDVVLAGDVLYKRELLPLLFATVTRVLASSDSNRAFVLCHVPRADVTHDVVQQQIEASGLQFEEVTLPAEDVVDATAELEECPMEDVGRAKLYYIT 281          
BLAST of mRNA_P-wetherbeei_contig152.6.1 vs. uniprot
Match: A0A1V9YS28_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YS28_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 2.470e-22
Identity = 74/178 (41.57%), Postives = 102/178 (57.30%), Query Frame = 1
Query:   10 LSGARVLELGAGVGIAGMLAARLRAAEVALTDGDACCV-PLLAKSAKDNG--LANVVAARLLWGDAKSTADECHTADAAASGASPPPMPLFNVILAGDVLYKPDLIDPLLTTAAAFLAPRGTFLLCHIPRAGVTHDTVAAALAAAGFAFE-AHRPSGDGVRAEMCAEDAARAMLYTAT 531
            ++G R LELGAG G+  ++A    AA +  TDGD   V  +L  + + N     N+    L WGD  S     +TA A   G++     LF+ +LAGDVLYK +L+  LL +   +L   GTFLLCHIPRA V+HD + +ALAA GFAF    + + D +  +   +DA RA+LYT T
Sbjct:   81 VAGKRTLELGAGTGLVSLVARLDGAASLVATDGDLEVVNDILTWNVQTNAPDATNLHTTSLWWGDEAS-----NTAFAERFGSA-----LFDRVLAGDVLYKGELVPLLLASVKTWLKSDGTFLLCHIPRADVSHDVLQSALAAHGFAFGITTKLARDNLPDDCAVDDAKRALLYTIT 248          
BLAST of mRNA_P-wetherbeei_contig152.6.1 vs. uniprot
Match: A0A067BSN2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BSN2_SAPPC)

HSP 1 Score: 98.6 bits (244), Expect = 4.850e-22
Identity = 72/171 (42.11%), Postives = 96/171 (56.14%), Query Frame = 1
Query:   22 RVLELGAGVGIAGMLAARLRAAEVALTDGDACCV-PLLAKSAKDNG--LANVVAARLLWGDAKSTADECHTADAAASGASPPPMPLFNVILAGDVLYKPDLIDPLLTTAAAFLAPRGTFLLCHIPRAGVTHDTVAAALAAAGFAFEAHRPSGDGVRAEMCA-EDAARAMLY 522
            RVLELGAG G+A +++    A ++  TDGD   V  +LA + + N     N+  A L WGDA S A     A+    G        F+V++AGDVLYK +L+  LL+T   +LAP G F+LCHIPRA V+HD + AAL A GF F            + C  +DA RA+LY
Sbjct:   85 RVLELGAGTGLASLVSRLAGATDLVATDGDLEVVNDVLAWNVQSNAPDATNLHTASLWWGDAASNAS---FAERFGDGR-------FDVLIAGDVLYKGELVQLLLSTVRTWLAPHGRFVLCHIPRADVSHDVLQAALTAHGFRFTTTTTLDRANLPDDCTVDDAKRAILY 245          
BLAST of mRNA_P-wetherbeei_contig152.6.1 vs. uniprot
Match: A0A7S2AXK7_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AXK7_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 3.100e-21
Identity = 67/143 (46.85%), Postives = 84/143 (58.74%), Query Frame = 1
Query:   25 VLELGAGVGIAGMLAARLRAAEVALTDGDACCVPLLAKSAKDNGLANVVAAR-LLWGDAKSTADECHTADAAASGASPPPMPLFNVILAGDVLYKPDLIDPLLTTAAAFLAPRGTFLLCHIPRAGVTHDTVAAALAAAGFAFE 450
            +LELG G G+AGM A RL AA V +TDGDA  + L  ++ + NGLA +V AR LLWG  +      H +    S A+P  +  F+VI+AGDVLYK DL   L  T  A LA  G   LCH+PRA VTHD V      +G + E
Sbjct:   99 ILELGGGSGLAGMCAMRLGAARVVITDGDATSLDLTNQNLEANGLAGLVEARRLLWGVGE------HLSAFKESEAAP--VCGFDVIIAGDVLYKEDLPLLLFDTVKALLAANGQCFLCHVPRARVTHDVVRQGARMSGLSIE 233          
BLAST of mRNA_P-wetherbeei_contig152.6.1 vs. uniprot
Match: A0A8J2SGM5_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SGM5_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 3.220e-21
Identity = 73/171 (42.69%), Postives = 92/171 (53.80%), Query Frame = 1
Query:   25 VLELGAGVGIAGMLAARLRAAEVALTDGDACCVPLLAKSAKDNGLANVVAARLLWGDAKSTADECHTADAAASGASPPPMPLFNVILAGDVLYKPDLIDPLLTTAAAFLAPRGTFLLCHIPRAGVTHDTVAAAL----AAAGFAFEAHRPSGDGVRAEMC-AEDAARAMLY 522
            V+ELGAG G+  M+AAR  A   A TDGD  C+ LL ++   NGL  VV           T  +C        G   PP+   +++LAGDVLYK  L++P L    A LAP G  LLCH+PRAGV+H+ V AAL    AA G A  A R        + C A+DAA A +Y
Sbjct:   77 VVELGAGAGLCAMVAARCGARMTAATDGDDRCLDLLTRNVAANGLDGVV-----------TVSKCFW------GRDAPPV--GDLVLAGDVLYKRALVEPFLDALEAALAPGGRALLCHLPRAGVSHEVVEAALRAREAAGGPALAAVRAPASAEFGDDCTADDAAAARVY 228          
BLAST of mRNA_P-wetherbeei_contig152.6.1 vs. uniprot
Match: M4B2J8_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B2J8_HYAAE)

HSP 1 Score: 95.5 bits (236), Expect = 9.610e-21
Identity = 75/180 (41.67%), Postives = 95/180 (52.78%), Query Frame = 1
Query:   22 RVLELGAGVGIAGMLAARLRAAEVALTDGDACCVPLLAKSAKDNGLANVVAAR-LLWGDAKSTADECHTADAAASGASPPPMPLFNVILAGDVLYKPDLIDPLLTTAAAFLAPRG---TFLLCHIPRAGVTHDTVAAALAAAGFAFE-----AHRPSGDGVRAEMCAE-DAARAMLYTAT 531
            RVLELGAG GI  +++++L A     TDGD   V LLAK+   N + NVV AR LLWGD  ST        +A S          +V+LAGDVLYK +L+  L TT    L   G    F+LCHIPRA V+H+ V   +  +G  F+     A   +   V+ E C E D  RA LY  T
Sbjct:   93 RVLELGAGTGICSIVSSKLGAMHCMATDGDEEVVELLAKNVHVNEVENVVVARPLLWGDEPSTQMLLEEFPSAFSDV--------DVVLAGDVLYKSELLPLLFTTVMQVLTVDGKGRAFVLCHIPRADVSHELVQKQIIGSGLRFKEVELPAENETDAAVKLEECPEEDVRRAKLYVIT 264          
BLAST of mRNA_P-wetherbeei_contig152.6.1 vs. uniprot
Match: A0A485K7E0_9STRA (Aste57867_278 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K7E0_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 7.700e-20
Identity = 73/180 (40.56%), Postives = 101/180 (56.11%), Query Frame = 1
Query:    1 TSSLSGARVLELGAGVGIAGMLAARLRAAEVALTDGDACCVP-LLAKSAKDNGLAN--VVAARLLWGDAKSTADECHTADAAASGASPPPMPLFNVILAGDVLYKPDLIDPLLTTAAAFLAP-RGTFLLCHIPRAGVTHDTVAAALAAAGFAFEAHRPSGDGVRA-EMCA-EDAARAMLY 522
            T+ ++G RVLELGAG G+  ++A    A  V  TDGD   V  +LA +   N   +  +  + L WGDA S+ D          GA+P     F+V+LAGDVLYK +L+  LL T  A++ P  GTF LCHIPRA V+H+ + AAL A GF F   +   D  +  E C+ +D  +A +Y
Sbjct:   73 TALVAGKRVLELGAGTGLVSLVAQLAGAPTVVATDGDMGVVTDILAWNVDHNAAVSSGIHTSSLWWGDAASS-DTFR----GRFGAAP-----FDVVLAGDVLYKGELVPLLLATVKAWMDPAHGTFFLCHIPRADVSHEVLQAALTAHGFVFSVLQDVADAAQLPEDCSMDDVKKAKVY 242          
BLAST of mRNA_P-wetherbeei_contig152.6.1 vs. uniprot
Match: A0A484DWK2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DWK2_BRELC)

HSP 1 Score: 92.4 bits (228), Expect = 1.620e-19
Identity = 77/185 (41.62%), Postives = 95/185 (51.35%), Query Frame = 1
Query:   10 LSGARVLELGAGVGIAGMLAARLRAAEVALTDGDACCVPLLAKSAKDNGLANVVAAR-LLWGDAKSTADECHTADAAASGASPPPMPLFNVILAGDVLYKPDLIDPLLTTAAAFLAPRGT----FLLCHIPRAGVTHDTVAAALAAAGFAF-EAHRPSGD--GVRAEMC---AEDAARAMLYTAT 531
            + G RVLELGAG GI  +++++L A +   TDGD   V LLAK+   NG  +VV AR L WGD  ST         A            +V+LAGDVLYK +L+  L TT    L+        FLLCH+PRA VTHD V   +  +G  F E   P  D   V AE+     ED  RA LY  T
Sbjct:   96 VGGKRVLELGAGTGICSIVSSKLGAKKCLATDGDEEVVELLAKNVLINGEESVVTARSLYWGDEVSTQTLLKEFPCALMDV--------DVVLAGDVLYKCELLPLLFTTVTQMLSMNDDVERIFLLCHVPRADVTHDLVQKQIVLSGLKFCEVQVPPEDVASVAAELAECPVEDVERARLYYIT 272          
BLAST of mRNA_P-wetherbeei_contig152.6.1 vs. uniprot
Match: A0A421F9P3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421F9P3_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.010e-19
Identity = 77/180 (42.78%), Postives = 93/180 (51.67%), Query Frame = 1
Query:   22 RVLELGAGVGIAGMLAARLRAAEVALTDGDACCVPLLAKSAKDNGLANVVAAR-LLWGDAKSTADECHTADAAASGASPPPMPLFNVILAGDVLYKPDLIDPLLTTAAAFLAPRG---TFLLCHIPRAGVTHDTVAAALAAAGFAFEAHR-PSGD----GVRAEMCAE-DAARAMLYTAT 531
            RVLELGAG GI  ++A++L A +   TDGD   V LL K+ K NG   VV AR L WGD  S      T  A   GA        +++LAGDVLYK +L+  L  T    L   G    F+LCHIPRA VTHD V   +  +G  FE  + P+ D        E C E D  RA LY  T
Sbjct:   91 RVLELGAGTGICSIVASKLGANKCLATDGDEEVVELLQKNIKVNGAERVVTARSLFWGDEPSA----QTLLAELPGAFTD----VDIVLAGDVLYKSELLPLLFATVTRVLEAGGDGRAFVLCHIPRADVTHDLVQKQIVDSGLQFEEVKLPAEDIADAAAELEECPEEDVKRARLYYIT 262          
BLAST of mRNA_P-wetherbeei_contig152.6.1 vs. uniprot
Match: A0A3F2S098_9STRA (OrfB_Zn_ribbon domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S098_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 3.390e-19
Identity = 77/180 (42.78%), Postives = 94/180 (52.22%), Query Frame = 1
Query:   22 RVLELGAGVGIAGMLAARLRAAEVALTDGDACCVPLLAKSAKDNGLANVVAAR-LLWGDAKSTADECHTADAAASGASPPPMPLFNVILAGDVLYKPDLIDPLLTTAAAFLAPRG---TFLLCHIPRAGVTHDTVAAALAAAGFAFEAHR-PSGD----GVRAEMCAE-DAARAMLYTAT 531
            RVLELGAG GI  ++A++L A +   TDGD   V LL K+ K NG   VV AR L WGD  S      T  A   GA        +++LAGDVLYK +L+  L  T    L   G    F+LCHIPRA VTHD V   +  +G  FE  + P+ D      + E C E D  RA LY  T
Sbjct:  209 RVLELGAGTGICSIVASKLGANKCLATDGDEEVVELLQKNIKVNGAERVVTARSLFWGDEPSA----QTLLAELPGAFTD----VDIVLAGDVLYKSELLPLLFATVTRVLVADGDDRAFVLCHIPRADVTHDLVQKQIVDSGLQFEEVKLPAEDIADAAAKLEECPEEDVKRARLYYIT 380          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig152.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A662WUX6_9STRA3.110e-2345.60Uncharacterized protein (Fragment) n=2 Tax=Nothoph... [more]
A0A1V9YS28_9STRA2.470e-2241.57Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A067BSN2_SAPPC4.850e-2242.11Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A7S2AXK7_9STRA3.100e-2146.85Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A8J2SGM5_9STRA3.220e-2142.69Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]
M4B2J8_HYAAE9.610e-2141.67Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A485K7E0_9STRA7.700e-2040.56Aste57867_278 protein n=1 Tax=Aphanomyces stellatu... [more]
A0A484DWK2_BRELC1.620e-1941.62Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A421F9P3_9STRA2.010e-1942.78Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
A0A3F2S098_9STRA3.390e-1942.78OrfB_Zn_ribbon domain-containing protein n=2 Tax=P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig152contigP-wetherbeei_contig152:12480..13202 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog112098.XP_008609916.1
PFAMsMethyltransf_16
Model size531
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.2e-22
EggNOG OGsCOG3897@1|root,KOG2920@2759|Eukaryota
Descriptionmethyltransferase activity
Cds size531
COG categoryJ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186048.0590537-CDS-P-wetherbeei_contig152:12479..127981683186048.0590537-CDS-P-wetherbeei_contig152:12479..12798Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig152 12480..12798 -
1683186048.067644-CDS-P-wetherbeei_contig152:12990..132021683186048.067644-CDS-P-wetherbeei_contig152:12990..13202Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig152 12991..13202 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig152.6.1prot_P-wetherbeei_contig152.6.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig152 12480..13202 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig152.6.1

>prot_P-wetherbeei_contig152.6.1 ID=prot_P-wetherbeei_contig152.6.1|Name=mRNA_P-wetherbeei_contig152.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=177bp
TSSLSGARVLELGAGVGIAGMLAARLRAAEVALTDGDACCVPLLAKSAKD
NGLANVVAARLLWGDAKSTADECHTADAAASGASPPPMPLFNVILAGDVL
YKPDLIDPLLTTAAAFLAPRGTFLLCHIPRAGVTHDTVAAALAAAGFAFE
AHRPSGDGVRAEMCAEDAARAMLYTAT
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mRNA from alignment at P-wetherbeei_contig152:12480..13202-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig152.6.1 ID=mRNA_P-wetherbeei_contig152.6.1|Name=mRNA_P-wetherbeei_contig152.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=723bp|location=Sequence derived from alignment at P-wetherbeei_contig152:12480..13202- (Phaeothamnion wetherbeei SAG_119_79)
ACGTCGTCGCTCTCCGGAGCCCGTGTCCTCGAGCTCGGAGCGGGCGTCGG TATCGCCGGCATGCTGGCGGCGCGCCTGCGGGCAGCCGAGGTGGCGCTGA CGGACGGAGACGCCTGCTGCGTGCCGCTGTTGGCCAAAAGCGCAAAGGAC AATGGGCTCGCAAATGTGGTTGCGGCACGTCTGCTCTGGGGGGACGCCAA ATCGACAGCGGAGTTTGCTGCGGCGGTGAGTGCTTCTAGAGAGAAGGCGA TGTTGGCAATATCGGAAAGTAGTACACAGGAGAATGTGGGAGAAGCGGCA ATAGTGGGAGCAGCGTCTGCGGCGGCAACAGCGGCGAAAGCAACGGCTGC TAAAACATCGGCATTATTAGAGACATCGGATAGTAAAAAAGCAGCCGCCG CAAGCGAGTGTCACACGGCCGACGCGGCGGCTTCCGGTGCATCGCCGCCG CCGATGCCGCTATTCAACGTAATTCTGGCGGGAGACGTCCTCTACAAGCC AGACCTCATCGACCCATTGCTGACAACGGCCGCGGCCTTCCTGGCGCCGC GCGGCACCTTTCTGCTCTGTCACATCCCGCGCGCTGGGGTCACCCACGAC ACTGTGGCGGCGGCGCTGGCGGCGGCGGGCTTCGCGTTCGAGGCGCACCG CCCGTCCGGCGACGGCGTCCGCGCGGAGATGTGCGCGGAGGACGCGGCGC GGGCGATGCTCTACACGGCGACG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig152:12480..13202-

>mRNA_P-wetherbeei_contig152.6.1 ID=mRNA_P-wetherbeei_contig152.6.1|Name=mRNA_P-wetherbeei_contig152.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=531bp|location=Sequence derived from alignment at P-wetherbeei_contig152:12480..13202- (Phaeothamnion wetherbeei SAG_119_79)
ACGTCGTCGCTCTCCGGAGCCCGTGTCCTCGAGCTCGGAGCGGGCGTCGG
TATCGCCGGCATGCTGGCGGCGCGCCTGCGGGCAGCCGAGGTGGCGCTGA
CGGACGGAGACGCCTGCTGCGTGCCGCTGTTGGCCAAAAGCGCAAAGGAC
AATGGGCTCGCAAATGTGGTTGCGGCACGTCTGCTCTGGGGGGACGCCAA
ATCGACAGCGGACGAGTGTCACACGGCCGACGCGGCGGCTTCCGGTGCAT
CGCCGCCGCCGATGCCGCTATTCAACGTAATTCTGGCGGGAGACGTCCTC
TACAAGCCAGACCTCATCGACCCATTGCTGACAACGGCCGCGGCCTTCCT
GGCGCCGCGCGGCACCTTTCTGCTCTGTCACATCCCGCGCGCTGGGGTCA
CCCACGACACTGTGGCGGCGGCGCTGGCGGCGGCGGGCTTCGCGTTCGAG
GCGCACCGCCCGTCCGGCGACGGCGTCCGCGCGGAGATGTGCGCGGAGGA
CGCGGCGCGGGCGATGCTCTACACGGCGACG
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