mRNA_P-wetherbeei_contig15172.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15172.2.1
Unique NamemRNA_P-wetherbeei_contig15172.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15172.2.1 vs. uniprot
Match: A0A7K1C9B8_9ACTN (Peptide chain release factor 1 n=2 Tax=root TaxID=1 RepID=A0A7K1C9B8_9ACTN)

HSP 1 Score: 463 bits (1192), Expect = 6.270e-162
Identity = 239/298 (80.20%), Postives = 263/298 (88.26%), Query Frame = 1
Query:    1 DAQAARELLTMADDS-ERDALREELTSAEADIAALEEELRLLMLPRDPNDGKAVIMEIRGAEGGEEANLFARDLYEMYRAYAAAKGWSVEVLSHDPSDLGGLNQLTMLINGDTAWGRLKFEGGPHRVQRVPVTESQGRIHTSSATVLVLPEAEEVDVEIDERDLDIDVYRSSGPGGQGVNTTDSAVRITHRPTGLVVAMQDERSQLQNRARAMTVLRSRLLKLKQEEQEAALSVERRSQVGGGGRGEKIRTYNFKENRLTDHRIGFTIYRLQDVLAGDLDDVVDALTADERAHQLAGD 891
            DA+AAREL  M+DD+ ER+ L+ E  SAEAD+A LEEELR+L+LP+DPNDG+ VIMEIRGAEGGEEANLFARDLYEMY  YA  +GW VE LS DPSDLGG+NQ T ++ GD AW RLKFEGGPHRVQRVPVTESQGRIHTSSATV+VLPEAEEVDV ID++DL IDVYR+SGPGGQGVNTTDSAVRITH PTG+VV MQDERSQLQNRARAMTVLRSRLLKL Q+E +A +S ERRSQVGGGGRGEKIRTYNFKENRLTDHRIGFTIY L DVLAGDLD V+DAL  DER+ QLAGD
Sbjct:   57 DAEAARELTAMSDDAAEREQLKAEKESAEADVARLEEELRMLLLPKDPNDGRPVIMEIRGAEGGEEANLFARDLYEMYLGYATRRGWKVETLSVDPSDLGGVNQATFVVRGDDAWSRLKFEGGPHRVQRVPVTESQGRIHTSSATVMVLPEAEEVDVSIDDKDLQIDVYRASGPGGQGVNTTDSAVRITHLPTGVVVTMQDERSQLQNRARAMTVLRSRLLKLAQDEMDAKMSAERRSQVGGGGRGEKIRTYNFKENRLTDHRIGFTIYSLGDVLAGDLDGVIDALATDERSRQLAGD 354          
BLAST of mRNA_P-wetherbeei_contig15172.2.1 vs. uniprot
Match: A0A6J6GGG3_9ZZZZ (Unannotated protein n=1 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J6GGG3_9ZZZZ)

HSP 1 Score: 457 bits (1177), Expect = 1.290e-159
Identity = 232/294 (78.91%), Postives = 260/294 (88.44%), Query Frame = 1
Query:    1 DAQAARELLTMADDSERDALREELTSAEADIAALEEELRLLMLPRDPNDGKAVIMEIRGAEGGEEANLFARDLYEMYRAYAAAKGWSVEVLSHDPSDLGGLNQLTMLINGDTAWGRLKFEGGPHRVQRVPVTESQGRIHTSSATVLVLPEAEEVDVEIDERDLDIDVYRSSGPGGQGVNTTDSAVRITHRPTGLVVAMQDERSQLQNRARAMTVLRSRLLKLKQEEQEAALSVERRSQVGGGGRGEKIRTYNFKENRLTDHRIGFTIYRLQDVLAGDLDDVVDALTADERAHQL 882
            DA  AREL+  +   ER+  R EL  AE D+A LE+E+R LMLP+DPNDG+AVI+EIRGAEGGEEANLFARDLYEMYR +AA  GW VEVLS DPSDLGGLNQ+T ++ GDTAW  LKFEGGPHRVQRVPVTESQGRIHTSSATV+VLPEA+E+DVE+DERDLD+DVYRSSG GGQ VNTTDSAVR+THRPTGLVV MQDERSQLQN+ARA+ VLR+RLL+LKQ+EQ+AA+S ERRSQVGGGGR EKIRTYNFKENR+TDHRIGFTIYRL DVLAGDLDDVV+AL ADER  QL
Sbjct:   57 DADTARELVGASSGDEREQWRAELVQAETDLARLEDEIRTLMLPKDPNDGRAVIVEIRGAEGGEEANLFARDLYEMYRGFAARHGWQVEVLSSDPSDLGGLNQVTFVVRGDTAWSHLKFEGGPHRVQRVPVTESQGRIHTSSATVMVLPEADEIDVELDERDLDVDVYRSSGAGGQSVNTTDSAVRLTHRPTGLVVTMQDERSQLQNKARALQVLRARLLQLKQDEQDAAMSAERRSQVGGGGRSEKIRTYNFKENRVTDHRIGFTIYRLADVLAGDLDDVVNALQADERGRQL 350          
BLAST of mRNA_P-wetherbeei_contig15172.2.1 vs. uniprot
Match: A0A6I3ELZ8_9ACTN (Peptide chain release factor 1 n=2 Tax=root TaxID=1 RepID=A0A6I3ELZ8_9ACTN)

HSP 1 Score: 449 bits (1155), Expect = 2.660e-156
Identity = 228/298 (76.51%), Postives = 261/298 (87.58%), Query Frame = 1
Query:    1 DAQAARELLTMADD-SERDALREELTSAEADIAALEEELRLLMLPRDPNDGKAVIMEIRGAEGGEEANLFARDLYEMYRAYAAAKGWSVEVLSHDPSDLGGLNQLTMLINGDTAWGRLKFEGGPHRVQRVPVTESQGRIHTSSATVLVLPEAEEVDVEIDERDLDIDVYRSSGPGGQGVNTTDSAVRITHRPTGLVVAMQDERSQLQNRARAMTVLRSRLLKLKQEEQEAALSVERRSQVGGGGRGEKIRTYNFKENRLTDHRIGFTIYRLQDVLAGDLDDVVDALTADERAHQLAGD 891
            D +AARELL M +D SE++ L+ E  SA+AD+  LEEEL+ L+LP+DPNDGK VIMEIRGAEGGEEANLFAR+LY+MY AYA+ +GW +E LS DPS++GGLNQ+  +I GD AW R+KFEGGPHRVQRVPVTESQGRIHTSSATV+VLPEAEEVD+ IDE+DL IDVYR+SGPGGQGVNTTDSAVRITH+PTG+VV MQDERSQLQN+ARAMTVLRSRLLK  Q+E EA +S ERRSQVGGGGRGEKIRTYN+KENRLTDHRIGFTIY L DVL GDLD V+DAL  DER+ QLAG+
Sbjct:   57 DGEAARELLAMTEDASEKEQLKAEKESADADVERLEEELKALLLPKDPNDGKPVIMEIRGAEGGEEANLFARNLYDMYGAYASRRGWKIENLSVDPSEMGGLNQVVFMIKGDDAWSRMKFEGGPHRVQRVPVTESQGRIHTSSATVMVLPEAEEVDIHIDEKDLQIDVYRASGPGGQGVNTTDSAVRITHKPTGVVVTMQDERSQLQNKARAMTVLRSRLLKAAQDEHEAKMSAERRSQVGGGGRGEKIRTYNYKENRLTDHRIGFTIYSLSDVLQGDLDGVIDALATDERSRQLAGE 354          
BLAST of mRNA_P-wetherbeei_contig15172.2.1 vs. uniprot
Match: A0A6I3EYW1_9ACTN (Peptide chain release factor 1 n=2 Tax=root TaxID=1 RepID=A0A6I3EYW1_9ACTN)

HSP 1 Score: 449 bits (1154), Expect = 3.520e-156
Identity = 234/298 (78.52%), Postives = 259/298 (86.91%), Query Frame = 1
Query:    1 DAQAARELLTMADDSERDALREELTSAEADIAALEEELRLLMLPRDPNDGKAVIMEIRGAEGGEEANLFARDLYEMYRAYAAAKGWSVEVLSHDPSDLGGLNQLTMLINGDTAWGRLKFEGGPHRVQRVPVTESQGRIHTSSATVLVLPEAEEVDVEIDERDLDIDVYRSSGPGGQGVNTTDSAVRITHRPTGLVVAMQDERSQLQNRARAMTVLRSRLLKLKQEEQEAALSVERRSQVGGGGRGEKIRTYNFKENRLTDHRIGFTIYRLQDVLAGDLDDVVDALTADERAHQLAGDA 894
            DA+AARELL +A+D ER   ++EL   EA + ALEEELRLLMLP+DPNDG+ VIMEIRGAEGGEEANLFARDLY+MYRAYA AKGW+VEVLS D SDLGG+NQ+TM++ GDT+WGRLKFEGG HRVQRVP+TESQGRIHTSSATVLVLPEAEEV            VYRSSG GGQ VNTTDSAVRITH+PTG+VV MQDERSQ+QNRARAM VLR+RLLKL +++Q AA SVERRSQVG GGRGEKIRTYNFKENRLTDHRIGFTIYRLQDVLAGDLD+ +DALTADERA QLAG A
Sbjct:   57 DAEAARELLAVAEDDERAVWKQELAENEAALEALEEELRLLMLPKDPNDGRNVIMEIRGAEGGEEANLFARDLYDMYRAYANAKGWTVEVLSSDDSDLGGVNQVTMMVKGDTSWGRLKFEGGTHRVQRVPITESQGRIHTSSATVLVLPEAEEVXXXXXXXXXXXXVYRSSGAGGQSVNTTDSAVRITHKPTGVVVTMQDERSQIQNRARAMIVLRARLLKLAEDQQNAAQSVERRSQVGAGGRGEKIRTYNFKENRLTDHRIGFTIYRLQDVLAGDLDETIDALTADERAKQLAGHA 354          
BLAST of mRNA_P-wetherbeei_contig15172.2.1 vs. uniprot
Match: A0A524B501_9ACTN (Peptide chain release factor 1 n=1 Tax=Acidimicrobiales bacterium mtb01 TaxID=1967499 RepID=A0A524B501_9ACTN)

HSP 1 Score: 447 bits (1149), Expect = 2.590e-155
Identity = 228/298 (76.51%), Postives = 263/298 (88.26%), Query Frame = 1
Query:    1 DAQAARELLTMADD-SERDALREELTSAEADIAALEEELRLLMLPRDPNDGKAVIMEIRGAEGGEEANLFARDLYEMYRAYAAAKGWSVEVLSHDPSDLGGLNQLTMLINGDTAWGRLKFEGGPHRVQRVPVTESQGRIHTSSATVLVLPEAEEVDVEIDERDLDIDVYRSSGPGGQGVNTTDSAVRITHRPTGLVVAMQDERSQLQNRARAMTVLRSRLLKLKQEEQEAALSVERRSQVGGGGRGEKIRTYNFKENRLTDHRIGFTIYRLQDVLAGDLDDVVDALTADERAHQLAGD 891
            DAQAA +LL + DD +ER++L++E  +AE+D+A LEEEL+LL+LP+DPNDG+ VI+EIRGAEGGEEANLFARDLY+MY AYA  +GW  E L+ DPSDLGG+NQ T +I GD AW RLK+EGGPHRVQRVPVTESQGRIHTSSATV+VLPEAEEVDV+ID++DL +DV+RSSG GGQ VNTTDSAVRITH PTG+VV+MQDERSQ+QNRARAMTVLRSRLLK  QEEQ+A +S ERRSQVGGGGR EKIRTYNFKENRLTDHRIGFTIY L DVLAGDLD V+DAL  DERA QL+G+
Sbjct:   62 DAQAATDLLGLTDDVAERESLKDEKLAAESDVARLEEELKLLLLPKDPNDGRPVIIEIRGAEGGEEANLFARDLYDMYVAYAGRRGWKTETLAFDPSDLGGVNQATFVIRGDDAWSRLKYEGGPHRVQRVPVTESQGRIHTSSATVMVLPEAEEVDVQIDDKDLQVDVFRSSGAGGQSVNTTDSAVRITHIPTGIVVSMQDERSQIQNRARAMTVLRSRLLKAAQEEQDAKMSAERRSQVGGGGRSEKIRTYNFKENRLTDHRIGFTIYSLGDVLAGDLDSVIDALANDERARQLSGE 359          
BLAST of mRNA_P-wetherbeei_contig15172.2.1 vs. uniprot
Match: A0A7K1DPJ2_9ACTN (Peptide chain release factor 1 n=6 Tax=root TaxID=1 RepID=A0A7K1DPJ2_9ACTN)

HSP 1 Score: 445 bits (1145), Expect = 8.830e-155
Identity = 229/298 (76.85%), Postives = 258/298 (86.58%), Query Frame = 1
Query:    1 DAQAARELLTMAD-DSERDALREELTSAEADIAALEEELRLLMLPRDPNDGKAVIMEIRGAEGGEEANLFARDLYEMYRAYAAAKGWSVEVLSHDPSDLGGLNQLTMLINGDTAWGRLKFEGGPHRVQRVPVTESQGRIHTSSATVLVLPEAEEVDVEIDERDLDIDVYRSSGPGGQGVNTTDSAVRITHRPTGLVVAMQDERSQLQNRARAMTVLRSRLLKLKQEEQEAALSVERRSQVGGGGRGEKIRTYNFKENRLTDHRIGFTIYRLQDVLAGDLDDVVDALTADERAHQLAGD 891
            D +AARELL M D  +E++ L+ E  S++AD+A LEE LR L+LP+DPNDGK VI+E+RGAEGGEEANLFARDLYEMY AYA+ + W VE LS DPSDLGG+NQ+  +I GD AW R+KFEGGPHRVQRVPVTESQGRIHTSSATV+VL EAEEVD+ IDE+DL IDVYR+SGPGGQGVNTTDSAVRITH PTG+VV MQDERSQLQNRARAMTVLRSRLLK  Q+E EA +S ERRSQVGGGGRGEKIRTYN+KENRLTDHRIG+T+Y L DVLAGDLD V+DAL  DERA QLAGD
Sbjct:   57 DGEAARELLAMTDLPAEKEQLKNEKESSDADVARLEEVLRDLLLPKDPNDGKPVILEVRGAEGGEEANLFARDLYEMYVAYASRRRWKVETLSIDPSDLGGMNQVVFVIRGDDAWSRMKFEGGPHRVQRVPVTESQGRIHTSSATVMVLAEAEEVDIHIDEKDLQIDVYRASGPGGQGVNTTDSAVRITHIPTGVVVTMQDERSQLQNRARAMTVLRSRLLKAAQDEHEAKMSAERRSQVGGGGRGEKIRTYNYKENRLTDHRIGYTVYSLSDVLAGDLDGVIDALATDERARQLAGD 354          
BLAST of mRNA_P-wetherbeei_contig15172.2.1 vs. uniprot
Match: A0A6I3AS22_9ACTN (Peptide chain release factor 1 n=4 Tax=root TaxID=1 RepID=A0A6I3AS22_9ACTN)

HSP 1 Score: 440 bits (1131), Expect = 1.150e-152
Identity = 227/296 (76.69%), Postives = 255/296 (86.15%), Query Frame = 1
Query:    1 DAQAARELLTMADDSERDALREELTSAEADIAALEEELRLLMLPRDPNDGKAVIMEIRGAEGGEEANLFARDLYEMYRAYAAAKGWSVEVLSHDPSDLGGLNQLTMLINGDTAWGRLKFEGGPHRVQRVPVTESQGRIHTSSATVLVLPEAEEVDVEIDERDLDIDVYRSSGPGGQGVNTTDSAVRITHRPTGLVVAMQDERSQLQNRARAMTVLRSRLLKLKQEEQEAALSVERRSQVGGGGRGEKIRTYNFKENRLTDHRIGFTIYRLQDVLAGDLDDVVDALTADERAHQLAG 888
            DA AA+EL+      ERD LREELT+AEAD+  LE EL+LL+LP DPNDGK +IME+RGAEGGEEANLFARDL++MY+AYAA KGW+VEVL    SDLGG+NQ+T ++ GD AW  LKFEGGPHRVQRVPVTESQGRIHTS+ATV VLPEAEEVDV+ID  DL IDVYR+SGPGGQGVNTTDSAVRITHRPTG+VVAMQDERSQLQNRARAM VLRSRLLK++QEEQ A +   RR+QV GG R EKIRTYNFKENRLTDHRIG+T+YRLQDVLAGDLD++VDAL  DER   LAG
Sbjct:   57 DAAAAKELMAETSGDERDQLREELTAAEADLETLEAELKLLLLPSDPNDGKNLIMEVRGAEGGEEANLFARDLFDMYQAYAARKGWAVEVLGTYLSDLGGINQVTFVLKGDDAWAHLKFEGGPHRVQRVPVTESQGRIHTSAATVSVLPEAEEVDVDIDPNDLQIDVYRASGPGGQGVNTTDSAVRITHRPTGIVVAMQDERSQLQNRARAMQVLRSRLLKVRQEEQAALVGDARRAQVQGGNRSEKIRTYNFKENRLTDHRIGYTVYRLQDVLAGDLDELVDALQTDERTRLLAG 352          
BLAST of mRNA_P-wetherbeei_contig15172.2.1 vs. uniprot
Match: A0A6J6KNM8_9ZZZZ (Unannotated protein n=1 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J6KNM8_9ZZZZ)

HSP 1 Score: 437 bits (1123), Expect = 1.820e-151
Identity = 224/298 (75.17%), Postives = 256/298 (85.91%), Query Frame = 1
Query:    1 DAQAARELLTMADDSERDALREELTSAEADIAALEEELRLLMLPRDPNDGKAVIMEIRGAEGGEEANLFARDLYEMYRAYAAAKGWSVEVLSHDPSDLGGLNQLTMLINGDTAWGRLKFEGGPHRVQRVPVTESQGRIHTSSATVLVLPEAEEVDVEIDERDLDIDVYRSSGPGGQGVNTTDSAVRITHRPTGLVVAMQDERSQLQNRARAMTVLRSRLLKLKQEEQEAALSVERRSQVGGGGRGEKIRTYNFKENRLTDHRIGFTIYRLQDVLAGDLDDVVDALTADERAHQLAGDA 894
            DA+AA+EL+     ++RDA R E T+AE  +A LEEEL++LMLP DPNDGK V+MEIRGAEGGEEANLFARDL EMY AYAA +GW VEV+  DPSD+GG+NQ T+L  GD AW RL+FEGGPHRVQRVP TE+QGRIHTSSATV V+ EAEEVDVEID  DL IDVYR+SG GGQ +NTTDSAVRITH+PTGLVVAMQDERSQLQNRARAMTVLRSRLLKL+Q+EQEA  S ERR+Q+GGGGRGEKIRTYN+KENR+TDHRIGFT+Y+LQ  L GDLD V+DALTAD RA QL+ +A
Sbjct:   57 DAEAAKELMNEMSGADRDAFRAEATAAEQRVADLEEELKVLMLPPDPNDGKNVLMEIRGAEGGEEANLFARDLMEMYVAYAARRGWGVEVIQSDPSDMGGVNQATLLFKGDDAWSRLRFEGGPHRVQRVPATEAQGRIHTSSATVAVMTEAEEVDVEIDTNDLQIDVYRASGAGGQHINTTDSAVRITHKPTGLVVAMQDERSQLQNRARAMTVLRSRLLKLRQDEQEAQASAERRAQIGGGGRGEKIRTYNYKENRITDHRIGFTLYQLQAALGGDLDAVIDALTADLRARQLSENA 354          
BLAST of mRNA_P-wetherbeei_contig15172.2.1 vs. uniprot
Match: A0A6I3X1D4_9ACTN (Peptide chain release factor 1 n=2 Tax=root TaxID=1 RepID=A0A6I3X1D4_9ACTN)

HSP 1 Score: 431 bits (1109), Expect = 2.540e-149
Identity = 226/295 (76.61%), Postives = 249/295 (84.41%), Query Frame = 1
Query:    1 DAQAARELLTMADDSERDALREELTSAEADIAALEEELRLLMLPRDPNDGKAVIMEIRGAEGGEEANLFARDLYEMYRAYAAAKGWSVEVLSHDPSDLGGLNQLTMLINGDTAWGRLKFEGGPHRVQRVPVTESQGRIHTSSATVLVLPEAEEVDVEIDERDLDIDVYRSSGPGGQGVNTTDSAVRITHRPTGLVVAMQDERSQLQNRARAMTVLRSRLLKLKQEEQEAALSVERRSQVGGGGRGEKIRTYNFKENRLTDHRIGFTIYRLQDVLAGDLDDVVDALTADERAHQLA 885
            D  AARELLT A   ERD LR +L  +E DIA LEEE+RLL+LPRDPNDGKAVIMEIRGAEGGEEANLFARDL+EMY  YAA  GWSV+ LS D SDLGGLNQ+T +I GDTAW  LK+EGG HRVQRVPVTESQGRIHTSSATVLVL          DE+DL IDVYR+SGPGGQGVNTTDSAVRITH+PTG+ VAMQDERSQLQNRARAMTVLR+RLL+  Q+E +A  S ER+SQVG GGRGEKIRTYNFKENR+TDHRIGFTIYRLQ+VLAG+L DVV+AL A+ERA QLA
Sbjct:   57 DVAAARELLTYASADERDGLRADLARSEVDIARLEEEIRLLLLPRDPNDGKAVIMEIRGAEGGEEANLFARDLFEMYSGYAAQMGWSVDALSTDVSDLGGLNQITFMIKGDTAWSHLKYEGGTHRVQRVPVTESQGRIHTSSATVLVLXXXXXXXXXXDEKDLQIDVYRASGPGGQGVNTTDSAVRITHKPTGIAVAMQDERSQLQNRARAMTVLRARLLQAAQQEADARASAERKSQVGTGGRGEKIRTYNFKENRVTDHRIGFTIYRLQEVLAGNLTDVVEALAAEERARQLA 351          
BLAST of mRNA_P-wetherbeei_contig15172.2.1 vs. uniprot
Match: A0A6L6CRU8_9ACTN (Peptide chain release factor 1 n=2 Tax=root TaxID=1 RepID=A0A6L6CRU8_9ACTN)

HSP 1 Score: 427 bits (1099), Expect = 8.720e-148
Identity = 218/295 (73.90%), Postives = 259/295 (87.80%), Query Frame = 1
Query:    4 AQAARELLTMADDSERDALREELTSAEADIAALEEELRLLMLPRDPNDGKAVIMEIRGAEGGEEANLFARDLYEMYRAYAAAKGWSVEVLSHDPSDLGGLNQLTMLINGDTAWGRLKFEGGPHRVQRVPVTESQGRIHTSSATVLVLPEAEEVDVEIDERDLDIDVYRSSGPGGQGVNTTDSAVRITHRPTGLVVAMQDERSQLQNRARAMTVLRSRLLKLKQEEQEAALSVERRSQVGGGGRGEKIRTYNFKENRLTDHRIGFTIYRLQDVLAGDLDDVVDALTADERAHQLAG 888
            A+AAREL+  A  +ER+ L+ EL +A+  +A LEE L++L+LP DPNDGK +I+EIRGAEGGEEANLFA DL++MY A+A   GWS+EVLS D S +GG+NQ+TML+ GDTAW RL+FEGGPHRVQRVPVTE+QGRIHTSSATV+V+PEAEEV+VEIDE+DL+IDVYR+SGPGGQGVNTTDSAVRITH P+GLVVAMQDERSQLQNR RAMTVLRSRLLKL+++EQ   +S ER++QVG GGRGEKIRTYNFKENR+TDHRIGFT+Y+LQDVLAG++D VVDALTA     QLAG
Sbjct:   58 AEAARELMADAKGAEREQLQAELETAQLRMAELEERLKILLLPTDPNDGKNLIVEIRGAEGGEEANLFAHDLFDMYSAWAVRNGWSIEVLSLDKSPMGGINQVTMLVKGDTAWTRLRFEGGPHRVQRVPVTEAQGRIHTSSATVMVMPEAEEVEVEIDEKDLNIDVYRASGPGGQGVNTTDSAVRITHIPSGLVVAMQDERSQLQNRLRAMTVLRSRLLKLREDEQAEKMSAERKAQVGKGGRGEKIRTYNFKENRVTDHRIGFTLYQLQDVLAGNVDPVVDALTAQFEIEQLAG 352          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15172.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7K1C9B8_9ACTN6.270e-16280.20Peptide chain release factor 1 n=2 Tax=root TaxID=... [more]
A0A6J6GGG3_9ZZZZ1.290e-15978.91Unannotated protein n=1 Tax=freshwater metagenome ... [more]
A0A6I3ELZ8_9ACTN2.660e-15676.51Peptide chain release factor 1 n=2 Tax=root TaxID=... [more]
A0A6I3EYW1_9ACTN3.520e-15678.52Peptide chain release factor 1 n=2 Tax=root TaxID=... [more]
A0A524B501_9ACTN2.590e-15576.51Peptide chain release factor 1 n=1 Tax=Acidimicrob... [more]
A0A7K1DPJ2_9ACTN8.830e-15576.85Peptide chain release factor 1 n=6 Tax=root TaxID=... [more]
A0A6I3AS22_9ACTN1.150e-15276.69Peptide chain release factor 1 n=4 Tax=root TaxID=... [more]
A0A6J6KNM8_9ZZZZ1.820e-15175.17Unannotated protein n=1 Tax=freshwater metagenome ... [more]
A0A6I3X1D4_9ACTN2.540e-14976.61Peptide chain release factor 1 n=2 Tax=root TaxID=... [more]
A0A6L6CRU8_9ACTN8.720e-14873.90Peptide chain release factor 1 n=2 Tax=root TaxID=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15172contigP-wetherbeei_contig15172:741..1637 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1313172.YM304_10470
Preferred nameprfA
PFAMsPCRF,RF-1
Model size897
Max annot lvl84992|Acidimicrobiia
KEGG koko:K02835
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.32e-134
EggNOG OGsCOG0216@1|root,COG0216@2|Bacteria,2GJWG@201174|Actinobacteria,4CMPQ@84992|Acidimicrobiia
DescriptionPeptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
Cds size867
COG categoryJ
BRITEko00000,ko03012
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186047.120122-CDS-P-wetherbeei_contig15172:740..16071683186047.120122-CDS-P-wetherbeei_contig15172:740..1607Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15172 741..1607 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186047.130898-UTR-P-wetherbeei_contig15172:1607..16371683186047.130898-UTR-P-wetherbeei_contig15172:1607..1637Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig15172 1608..1637 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15172.2.1prot_P-wetherbeei_contig15172.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15172 741..1607 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15172.2.1

>prot_P-wetherbeei_contig15172.2.1 ID=prot_P-wetherbeei_contig15172.2.1|Name=mRNA_P-wetherbeei_contig15172.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=289bp
MADDSERDALREELTSAEADIAALEEELRLLMLPRDPNDGKAVIMEIRGA
EGGEEANLFARDLYEMYRAYAAAKGWSVEVLSHDPSDLGGLNQLTMLING
DTAWGRLKFEGGPHRVQRVPVTESQGRIHTSSATVLVLPEAEEVDVEIDE
RDLDIDVYRSSGPGGQGVNTTDSAVRITHRPTGLVVAMQDERSQLQNRAR
AMTVLRSRLLKLKQEEQEAALSVERRSQVGGGGRGEKIRTYNFKENRLTD
HRIGFTIYRLQDVLAGDLDDVVDALTADERAHQLAGDA*
back to top

mRNA from alignment at P-wetherbeei_contig15172:741..1637-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15172.2.1 ID=mRNA_P-wetherbeei_contig15172.2.1|Name=mRNA_P-wetherbeei_contig15172.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=897bp|location=Sequence derived from alignment at P-wetherbeei_contig15172:741..1637- (Phaeothamnion wetherbeei SAG_119_79)
GACGCGCAGGCGGCGCGCGAGCTGCTGACGATGGCCGACGACAGCGAGCG CGACGCGTTGCGCGAAGAGCTGACCTCGGCCGAGGCCGACATCGCCGCGT TGGAGGAGGAGCTGCGGTTGTTGATGCTGCCGCGCGACCCCAACGACGGC AAGGCCGTCATCATGGAGATCCGAGGCGCCGAGGGCGGCGAAGAGGCCAA CCTGTTCGCTCGCGACCTCTACGAGATGTACCGCGCGTACGCGGCGGCGA AGGGGTGGTCGGTGGAGGTGCTGTCGCACGACCCCAGCGACCTCGGCGGG CTCAACCAATTGACGATGCTGATCAACGGCGACACGGCGTGGGGCCGGTT GAAGTTCGAAGGTGGGCCGCACCGCGTGCAACGCGTGCCGGTCACCGAGA GCCAGGGGCGCATCCACACGTCGTCGGCGACGGTGCTCGTGCTGCCCGAG GCGGAAGAGGTCGACGTCGAGATCGACGAGCGCGACCTGGACATCGACGT CTACCGCAGCAGCGGCCCGGGCGGTCAGGGCGTCAACACCACCGACTCGG CGGTGCGCATCACCCACCGTCCGACCGGTCTCGTCGTGGCGATGCAGGAC GAGCGCAGCCAGCTGCAGAACCGGGCGCGGGCGATGACCGTGCTGCGGTC GCGGTTGTTGAAGTTGAAGCAGGAGGAGCAGGAGGCGGCGCTCTCCGTGG AGCGTCGTTCGCAGGTCGGGGGTGGCGGTCGCGGCGAGAAGATCCGCACC TACAACTTCAAGGAGAACCGTCTCACGGACCACCGCATCGGGTTCACGAT CTACCGGCTGCAGGACGTGCTCGCCGGCGATCTCGACGACGTCGTCGACG CCCTCACGGCCGACGAGCGGGCGCACCAGCTCGCCGGTGATGCCTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig15172:741..1637-

>mRNA_P-wetherbeei_contig15172.2.1 ID=mRNA_P-wetherbeei_contig15172.2.1|Name=mRNA_P-wetherbeei_contig15172.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=867bp|location=Sequence derived from alignment at P-wetherbeei_contig15172:741..1637- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCGACGACAGCGAGCGCGACGCGTTGCGCGAAGAGCTGACCTCGGC
CGAGGCCGACATCGCCGCGTTGGAGGAGGAGCTGCGGTTGTTGATGCTGC
CGCGCGACCCCAACGACGGCAAGGCCGTCATCATGGAGATCCGAGGCGCC
GAGGGCGGCGAAGAGGCCAACCTGTTCGCTCGCGACCTCTACGAGATGTA
CCGCGCGTACGCGGCGGCGAAGGGGTGGTCGGTGGAGGTGCTGTCGCACG
ACCCCAGCGACCTCGGCGGGCTCAACCAATTGACGATGCTGATCAACGGC
GACACGGCGTGGGGCCGGTTGAAGTTCGAAGGTGGGCCGCACCGCGTGCA
ACGCGTGCCGGTCACCGAGAGCCAGGGGCGCATCCACACGTCGTCGGCGA
CGGTGCTCGTGCTGCCCGAGGCGGAAGAGGTCGACGTCGAGATCGACGAG
CGCGACCTGGACATCGACGTCTACCGCAGCAGCGGCCCGGGCGGTCAGGG
CGTCAACACCACCGACTCGGCGGTGCGCATCACCCACCGTCCGACCGGTC
TCGTCGTGGCGATGCAGGACGAGCGCAGCCAGCTGCAGAACCGGGCGCGG
GCGATGACCGTGCTGCGGTCGCGGTTGTTGAAGTTGAAGCAGGAGGAGCA
GGAGGCGGCGCTCTCCGTGGAGCGTCGTTCGCAGGTCGGGGGTGGCGGTC
GCGGCGAGAAGATCCGCACCTACAACTTCAAGGAGAACCGTCTCACGGAC
CACCGCATCGGGTTCACGATCTACCGGCTGCAGGACGTGCTCGCCGGCGA
TCTCGACGACGTCGTCGACGCCCTCACGGCCGACGAGCGGGCGCACCAGC
TCGCCGGTGATGCCTGA
back to top