mRNA_P-wetherbeei_contig1517.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1517.1.1
Unique NamemRNA_P-wetherbeei_contig1517.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1517.1.1 vs. uniprot
Match: A0A835YRE7_9STRA (Threonine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRE7_9STRA)

HSP 1 Score: 174 bits (441), Expect = 1.490e-44
Identity = 112/256 (43.75%), Postives = 149/256 (58.20%), Query Frame = 2
Query:  545 PTVSFSIPTGAAGHLTAGLIAKLMGLPVERFVVANNKNHVIDRMLREGVLQVSSFVHHTNSPAMDIAAPYNIERVLWLV----DSQNGERVGEWMRAFNAGEAVRLPTSVMTAFAAHGVVSASVADGGPDGVLGCIRTIRRESGYLLDPHSAVGVAAAWKMAEEGLLHGPVVCMGCAHPAKFVETVAEALEIGP-DEAATAVMDPDQPCVTAVIETTSG--SFSADSVPLWKAGEDWTPLLKKMIVEVTERRATEA 1291
            P V FS+PTGAAG++TAG+IA+LMGLP   F+VA N+N V+ RML  GV++ S+ V  T SPAMDI APYN+ER+  L+    D   G  +   M  FN+GE V LP  +    AA    S SV++         IRT  +   Y+LDPH+AVGVA A     +    G VVCMGCAH AKF ET+  AL +    EA   + + D  CV A +  T    + +A  + ++  G+DW   LK++I EVT +RA  A
Sbjct:  261 PPVYFSVPTGAAGNITAGVIARLMGLPAAGFLVAVNENDVMHRMLSTGVMEKSADVLLTTSPAMDIQAPYNVERLFHLLWRDGDPDKGASIRALMADFNSGERVPLPQHLKDGIAALNFKSVSVSNAR---AAAAIRTAYQADSYVLDPHTAVGVATAMDTILKNR-RGIVVCMGCAHAAKFPETIQAALALPSLAEACRIIPNRDHKCVAATVAATDALSAGAAVQIEVFTKGKDWLARLKEVIREVTAQRAEAA 512          
BLAST of mRNA_P-wetherbeei_contig1517.1.1 vs. uniprot
Match: A0A7S3PNQ1_9STRA (Threonine synthase n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PNQ1_9STRA)

HSP 1 Score: 154 bits (388), Expect = 2.370e-37
Identity = 95/247 (38.46%), Postives = 140/247 (56.68%), Query Frame = 2
Query:  551 VSFSIPTGAAGHLTAGLIAKLMGLPVERFV-VANNKNHVIDRMLREGVLQVSSFVHHTNSPAMDIAAPYNIERVLWLVDSQNGERVGEWMRAFNA--GEAVRLPTSVMTAFAAHGVVSASVADGGPDGVLGCIRTIRRESGYLLDPHSAVGVAAAWKMAEEG--LLHGPVVCMGCAHPAKFVETVAEALEIGPDEAATAVMDPDQPCVTAVIETTSGSFSADSVPLWKAGEDWTPLLKKMIVEVTER 1276
            V FSIPTGAAGHLTAG+IA  MGLP++  + VA N N ++ R L  G   V+     T S AMDI  PYNIER++ L   +NG+   EWM +F    G     P  +      + + S+SV+D   + +  CI++      YLLDPH+AVGV A  K+ ++   + +  ++CMGCAH +KFVETV+  LEI P +      +     ++ V+E  S +   D   ++  GEDWT  L++++  V+ +
Sbjct:  252 VGFSIPTGAAGHLTAGIIAMQMGLPIKGGMHVATNNNDIMHRFLSCGTATVAQSCLRTLSNAMDIQVPYNIERIVNLASGRNGKLTREWMSSFKQENGSFSATPQVMKVLHDEYHITSSSVSD---EDIQQCIKSTWSSKKYLLDPHTAVGVFAGQKVLKDSSNMRNMTMICMGCAHASKFVETVSTCLEIKPTDVVQLCTNKQHENISHVLELFSAAEDEDC-RIFPVGEDWTQELQQLVESVSAK 494          
BLAST of mRNA_P-wetherbeei_contig1517.1.1 vs. uniprot
Match: A0A0M0JGK6_9EUKA (Threonine synthase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JGK6_9EUKA)

HSP 1 Score: 137 bits (346), Expect = 2.690e-31
Identity = 99/286 (34.62%), Postives = 141/286 (49.30%), Query Frame = 2
Query:  548 TVSFSIPTGAAGHLTAGLIAKLMGLPVERFVVANNKNHVIDRMLREGVLQVSSFVHHTNSPAMDIAAPYNIERVLWLVDSQNGERVGEWMRAFNAGEAVRLPTSVMTAFAAHGVVSASVADGGPDGVLGCIRTIRRESGYLLDPHSAVGVAAAWKM---------------AEEGLLHGPVVCMGCAHPAKFVETVAEALEIGPDEAATAVMDPD---QPCVTAV------IETTSGSFSADS-----------VPLWKAGEDWTPLLKKMIVEVTERRATEAAAA 1300
            TV F++P GA GHL AGL+A  MGLP  R + A N N  + R+L  G+L        T SP+MDI  PYN+ R+L++    +G+ V  W      G  ++LP  ++  + A  V S +V D   +  L  +R+ R +SGY LDPH+AVGVAAA +                A  G    P VC+GCAH  KF+ +VA AL  G    AT    P+     CV+AV      +    G+ + D              +++ GEDW   L+ ++  VT R +  A A+
Sbjct:  270 TVQFAVPCGAGGHLAAGLLALQMGLPA-RLIAATNANDAMHRVLSTGILHAGRPSRPTASPSMDIQMPYNVWRLLYVASGGDGDAVRRWQEQLRIG-VLQLPPHIVM-WLAKRVGSVAVDD---EETLATVRSARVQSGYFLDPHTAVGVAAARRSPFGIYGPPPSTGFVRAHNGATAEPRVCLGCAHAVKFLPSVAAAL--GSTIDATLAAMPECVTHQCVSAVGRMARELHAAGGAAAGDGFSKEGQMPTGCTTVFRRGEDWEHRLRALLASVTARASERAGAS 547          
BLAST of mRNA_P-wetherbeei_contig1517.1.1 vs. uniprot
Match: A0A7S0J2F2_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J2F2_9EUKA)

HSP 1 Score: 125 bits (314), Expect = 5.000e-28
Identity = 77/182 (42.31%), Postives = 107/182 (58.79%), Query Frame = 2
Query:  557 FSIPTGAAGHLTAGLIAKLMGLPVERFVVANNKNHVIDRMLREGVLQVSSFVHHTNSPAMDIAAPYNIERVLWLVDSQNGERVGEWMRAFNAGEAVRLPTSVMTAFAAHGVVSASVADGGPDGVLGCIRTIRRESGYLLDPHSAVGVAAAWKMAEEGLLHGPVVCMGCAHPAKFVETVAEAL 1102
            F +P GAAGHL+AGL+A  +GLP  + + A N N V+ +++ +G +Q  + V  T SP+MDI  PYN+ R+L++   +N   V +W  AF AG  + LP +V  + AA  V SA V+D   +     I  +  + GYLLDPHSAV VAAA ++      H   VC GCAH  KF+   A AL
Sbjct:  134 FVVPCGAAGHLSAGLLALELGLPA-KLIAATNANDVLHQLISKGAVQAGA-VSRTLSPSMDIGVPYNVWRMLYVASGRNSLAVRKWQAAFAAGT-LELPEAVHRSLAAC-VRSARVSD---EETRHTIARVHMQCGYLLDPHSAVAVAAATQLGA----HSSAVCFGCAHAVKFLPAAAAAL 304          
BLAST of mRNA_P-wetherbeei_contig1517.1.1 vs. uniprot
Match: A0A5B8MLM8_9CHLO (Threonine synthase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MLM8_9CHLO)

HSP 1 Score: 127 bits (320), Expect = 5.250e-28
Identity = 84/247 (34.01%), Postives = 130/247 (52.63%), Query Frame = 2
Query:  557 FSIPTGAAGHLTAGLIAKLMGLPVERFVVANNKNHVIDRMLREGVLQVSSFVHHTNSPAMDIAAPYNIERVLWLVDSQNGERVGEWMRAFNA--GEAVRLPTSVMTAFAAH-GVVSASVADGGPDGVLGCIRTIRRESGYLLDPHSAVGVAAAWKMAEEGLLHGPVVCMGCAHPAKFVETVAEALEIG-PDEAATAVMDPDQPCVTAVIETTSGSFSA------DSVPLWKAGEDWTPLLKKMIVEV 1267
            F +PTG  GH +AG++A  MGLPV   V   N+N V+  ++  G L+    V  T +P+MDI+ PYN+ER+L+L+  QN  +V +WM+ +    G+ V L      + A    + S S +D    G+   I  +  E+ Y++DPH+AV VAAA+   E    +   + M CAHPAKF E V+++L    P  +  +  D   P V  ++     + +       D V  +K GEDWT  LK ++  +
Sbjct:  278 FYVPTGGGGHCSAGILAAQMGLPVHSVVACVNENDVLHTLISTGELESRREVVATLAPSMDISVPYNVERILFLLSKQNRAKVKQWMKRWKGEGGQKVDLTERERVSLAEELRLRSCSTSD---KGISETIAKVYDENAYVIDPHTAVAVAAAFADCEIPTSNVVKIVMACAHPAKFSEAVSQSLGGNVPMSSWISEADKKHPAVADILNLRQRASAPTTLSEHDGVHHFKKGEDWTTKLKGLLASL 521          
BLAST of mRNA_P-wetherbeei_contig1517.1.1 vs. uniprot
Match: UPI001B28BCD3 (threonine synthase n=4 Tax=unclassified Paenibacillus TaxID=185978 RepID=UPI001B28BCD3)

HSP 1 Score: 126 bits (316), Expect = 1.040e-27
Identity = 75/185 (40.54%), Postives = 109/185 (58.92%), Query Frame = 2
Query:  557 FSIPTGAAGHLTAGLIAKLMGLPVERFVVANNKNHVIDRMLREGVLQVSSFVHHTNSPAMDIAAPYNIERVLWLVDSQNGERVGEWMRAFNAGEAVRLP----TSVMTAFAAHGVVSASVADGGPDGVLGCIRTIRR---ESGYLLDPHSAVGVAAAWKMAEEGLLHGPVVCMGCAHPAKFVETV 1090
            FS+PTG  G + AG +A  MGLPV + V+A N+N++++R ++EGV +   F H T SP+MDI    N ER L+ V  +N E+   +M++F     +R+P    + V + FAA+GV+ A            C+ TI++   E  YLLDPHSA GVAAA +    G +   VV +  AHPAKF E++
Sbjct:  255 FSVPTGNFGDIFAGYLASRMGLPVGKLVLATNENNILERFVKEGVYKPDGF-HTTYSPSMDIQVASNFERYLYYVLDENAEQTESYMKSFQESGEIRIPQELLSKVQSEFAAYGVIGAE-----------CLATIQKYNDEKAYLLDPHSACGVAAAERTLPAGEV---VVSLATAHPAKFNESI 424          
BLAST of mRNA_P-wetherbeei_contig1517.1.1 vs. uniprot
Match: A0A398CG73_9BACL (Threonine synthase n=1 Tax=Cohnella faecalis TaxID=2315694 RepID=A0A398CG73_9BACL)

HSP 1 Score: 125 bits (313), Expect = 2.350e-27
Identity = 74/188 (39.36%), Postives = 108/188 (57.45%), Query Frame = 2
Query:  539 PLPTVSFSIPTGAAGHLTAGLIAKLMGLPVERFVVANNKNHVIDRMLREGVLQVSSFVHHTNSPAMDIAAPYNIERVLWLVDSQNGERVGEWMRAFNAGEAVRLPT----SVMTAFAAHGVVSASVADGGPDGVLGCIRTIRRESGYLLDPHSAVGVAAAWKMAEEGLLHGPVVCMGCAHPAKFVETV 1090
            P   V+FS+PTG  G + AG +AK MGLPV + ++A N+N++++R +REGV +   F H T SP+MDI    N ER L+ +  ++ + +   M  F     + +P     +V   F A+GV +        D  L  I +  +E+GYLLDPH+A GVAAA K+AE G +    V +  AHPAKF E +
Sbjct:  246 PAAKVNFSVPTGNFGDIFAGYLAKRMGLPVNKLILATNENNILERFVREGVYEPGEF-HMTYSPSMDIQVASNFERYLYYLYGEDSQAISALMDGFKKDGRIVIPEDKLRTVQADFGAYGVKN--------DECLATIGSYHKENGYLLDPHTACGVAAADKLAEAGEV---TVALSTAHPAKFDEAI 421          
BLAST of mRNA_P-wetherbeei_contig1517.1.1 vs. uniprot
Match: A0A431IDD5_9ACTN (Threonine synthase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A431IDD5_9ACTN)

HSP 1 Score: 124 bits (312), Expect = 4.140e-27
Identity = 73/191 (38.22%), Postives = 110/191 (57.59%), Query Frame = 2
Query:  551 VSFSIPTGAAGHLTAGLIAKLMGLPVERFVVANNKNHVIDRMLREGVLQVSSFVHHTNSPAMDIAAPYNIERVLWLVDSQNGERVGEWMRAFNAGEAVRLPTSVMTAFAAHGVVSASVADGGPDGVLGCIRTIRRESGYLLDPHSAVGVAAAWKMAEEGLLHGP---VVCMGCAHPAKFVETVAEALEIGP 1114
            VSF +PTG  G++ AG +AK MGLP+ER VVA+N+N ++ R    G + ++  V  T SP+MDI    N+ER+L+ V  ++G  + E M  F A  +V +P  V+    +         D   +     IR+++  +G L+DPH+AVG+  A  +A  G+L  P   VVC+  AHPAKF + VA A+ + P
Sbjct:  264 VSFVVPTGNFGNILAGWVAKRMGLPIERLVVASNRNDILTRFFSTGTMAITEVVP-TTSPSMDIQVSSNLERLLFEVLGRDGAALAELMARFRADGSVSVPAEVLAELRSE--FDCGRLD--DESAAAVIRSVQLHTGLLVDPHTAVGIGVAEALAGAGVLADPSVPVVCLATAHPAKFPDAVAAAVGVRP 449          
BLAST of mRNA_P-wetherbeei_contig1517.1.1 vs. uniprot
Match: A0A7S4MDZ6_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MDZ6_9EUKA)

HSP 1 Score: 124 bits (310), Expect = 4.250e-27
Identity = 73/185 (39.46%), Postives = 106/185 (57.30%), Query Frame = 2
Query:  536 KPLPTVSFSIPTGAAGHLTAGLIAKLMGLPVERFVVANNKNHVIDRMLREGVLQVSSFVHHTNSPAMDIAAPYNIERVLWLVDSQNGERVGEWMRAFNAGEAVRLPTSVMTAFAAHGVVSASVADGGPDGVLGCIRTIRRESGYLLDPHSAVGVAAAWKMAEEGLLHGPVVCMGCAHPAKFVETV 1090
            KPLP V F IPTG  G+ ++  +AK MGLPVER ++A N+N  I R L  G  ++   V  TN+PAMDI  PYNIER+L+L+ ++N E V  +++  +     +L   V  +       S+  AD     V   I+ I ++   ++DPH+AV V  A K+ E      P++C+  AHPAKF ET+
Sbjct:  210 KPLPPVRFCIPTGGLGNGSSCYLAKCMGLPVERIIMAVNENDTISRTLATGTFKMED-VKVTNAPAMDICNPYNIERLLYLMSNRNAELVQSFIKNQSLPAGAKLDNKVFESL--KNQFSSYSAD--QSEVCSTIKNIHKQWNEIIDPHTAVAVCVAKKLPESDNSDTPLICVATAHPAKFPETI 389          
BLAST of mRNA_P-wetherbeei_contig1517.1.1 vs. uniprot
Match: UPI001D11AA79 (threonine synthase n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D11AA79)

HSP 1 Score: 124 bits (311), Expect = 5.450e-27
Identity = 74/191 (38.74%), Postives = 109/191 (57.07%), Query Frame = 2
Query:  551 VSFSIPTGAAGHLTAGLIAKLMGLPVERFVVANNKNHVIDRMLREGVLQVSSFVHHTNSPAMDIAAPYNIERVLWLVDSQNGERVGEWMRAFNAGEAVRLPTSVMTAFAAHGVVSASVADGGPDGVLGCIRTIRRESGYLLDPHSAVGVAAAWKMAEEGLLHGP---VVCMGCAHPAKFVETVAEALEIGP 1114
            VSF +PTG  G++ AG +AK MGLPV+R VVA+N+N ++ R    G + ++  V  T SP+MDI    N+ER+L+ V   +G  + + M AF A   V +P  V+    A         D   +     IRT+++ +G L+DPH+AVG+  A  +A+ G L  P   VVC+  AHPAKF + V  A+ + P
Sbjct:  260 VSFVVPTGNFGNILAGWVAKQMGLPVDRLVVASNRNDILTRFFSTGTMAITEVVP-TTSPSMDIQVSSNLERLLFEVLGCDGAALADLMAAFRADGTVSVPVEVLQQLQAE--FDCGRLD--DESAAAVIRTVQQHTGLLVDPHTAVGIGVAEALADGGPLSDPSVPVVCLATAHPAKFPDAVEAAVGVRP 445          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1517.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YRE7_9STRA1.490e-4443.75Threonine synthase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S3PNQ1_9STRA2.370e-3738.46Threonine synthase n=2 Tax=Aplanochytrium stocchin... [more]
A0A0M0JGK6_9EUKA2.690e-3134.62Threonine synthase n=1 Tax=Chrysochromulina tobini... [more]
A0A7S0J2F2_9EUKA5.000e-2842.31Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A5B8MLM8_9CHLO5.250e-2834.01Threonine synthase n=1 Tax=Chloropicon primus TaxI... [more]
UPI001B28BCD31.040e-2740.54threonine synthase n=4 Tax=unclassified Paenibacil... [more]
A0A398CG73_9BACL2.350e-2739.36Threonine synthase n=1 Tax=Cohnella faecalis TaxID... [more]
A0A431IDD5_9ACTN4.140e-2738.22Threonine synthase n=1 Tax=Acidimicrobiia bacteriu... [more]
A0A7S4MDZ6_9EUKA4.250e-2739.46Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
UPI001D11AA795.450e-2738.74threonine synthase n=1 Tax=Aquihabitans sp. Kera 3... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1517contigP-wetherbeei_contig1517:212..3087 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog9478.XP_008069921.1
Preferred nameTHNSL2
PFAMsPALP,Thr_synth_N
Model size1573
Max annot lvl33208|Metazoa
Hectar predicted targeting categorymitochondrion
GOsGO:0003674,GO:0005488,GO:0005575,GO:0005576,GO:0006082,GO:0006520,GO:0006629,GO:0006631,GO:0006633,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007610,GO:0007626,GO:0008144,GO:0008150,GO:0008152,GO:0008345,GO:0008610,GO:0009056,GO:0009058,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016053,GO:0016054,GO:0016311,GO:0016597,GO:0019752,GO:0019842,GO:0030170,GO:0030537,GO:0031406,GO:0032501,GO:0032502,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044282,GO:0044283,GO:0046360,GO:0046361,GO:0046394,GO:0046395,GO:0046459,GO:0048037,GO:0048513,GO:0048731,GO:0048856,GO:0050662,GO:0051790,GO:0060322,GO:0070279,GO:0070905,GO:0071704,GO:0072330,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901605,GO:1901606
Exons7
Evalue7.03e-28
EggNOG OGsCOG0498@1|root,KOG2616@2759|Eukaryota,38DB9@33154|Opisthokonta,3BI93@33208|Metazoa,3D0F1@33213|Bilateria,484SX@7711|Chordata,492EQ@7742|Vertebrata,3J3MA@40674|Mammalia,35JNQ@314146|Euarchontoglires,4MET8@9443|Primates
DescriptionThreonine synthase-like 2
Cds size1185
COG categoryE
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1517.1.1prot_P-wetherbeei_contig1517.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1517 336..2823 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186046.8386476-UTR-P-wetherbeei_contig1517:211..3351683186046.8386476-UTR-P-wetherbeei_contig1517:211..335Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1517 212..335 +
1683186046.903536-UTR-P-wetherbeei_contig1517:2823..30871683186046.903536-UTR-P-wetherbeei_contig1517:2823..3087Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1517 2824..3087 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186046.8490314-CDS-P-wetherbeei_contig1517:335..6861683186046.8490314-CDS-P-wetherbeei_contig1517:335..686Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1517 336..686 +
1683186046.8566558-CDS-P-wetherbeei_contig1517:976..10041683186046.8566558-CDS-P-wetherbeei_contig1517:976..1004Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1517 977..1004 +
1683186046.863966-CDS-P-wetherbeei_contig1517:1119..12881683186046.863966-CDS-P-wetherbeei_contig1517:1119..1288Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1517 1120..1288 +
1683186046.8708467-CDS-P-wetherbeei_contig1517:1577..17041683186046.8708467-CDS-P-wetherbeei_contig1517:1577..1704Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1517 1578..1704 +
1683186046.8784385-CDS-P-wetherbeei_contig1517:1816..20421683186046.8784385-CDS-P-wetherbeei_contig1517:1816..2042Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1517 1817..2042 +
1683186046.885286-CDS-P-wetherbeei_contig1517:2300..24591683186046.885286-CDS-P-wetherbeei_contig1517:2300..2459Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1517 2301..2459 +
1683186046.8925028-CDS-P-wetherbeei_contig1517:2698..28231683186046.8925028-CDS-P-wetherbeei_contig1517:2698..2823Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1517 2699..2823 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1517.1.1

>prot_P-wetherbeei_contig1517.1.1 ID=prot_P-wetherbeei_contig1517.1.1|Name=mRNA_P-wetherbeei_contig1517.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=395bp
MSRLLVRNASSPAAVPDRVMFKKVSWQVLLPRFPHLPPSLPLILQCGAPH
LGCVFTCAPICQSVAGAGGTDAIDRGCRGELHGGVGGRHQRRHRRAVRAR
VRGRRFLRRAPPRQRQQHQRAAPLGTAGVPGAGGDGAKPLPTVSFSIPTG
AAGHLTAGLIAKLMGLPVERFVVANNKNHVIDRMLREGVLQVSSFVHHTN
SPAMDIAAPYNIERVLWLVDSQNGERVGEWMRAFNAGEAVRLPTSVMTAF
AAHGVVSASVADGGPDGVLGCIRTIRRESGYLLDPHSAVGVAAAWKMAEE
GLLHGPVVCMGCAHPAKFVETVAEALEIGPDEAATAVMDPDQPCVTAVIE
TTSGSFSADSVPLWKAGEDWTPLLKKMIVEVTERRATEAAAAPL*
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mRNA from alignment at P-wetherbeei_contig1517:212..3087+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1517.1.1 ID=mRNA_P-wetherbeei_contig1517.1.1|Name=mRNA_P-wetherbeei_contig1517.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2876bp|location=Sequence derived from alignment at P-wetherbeei_contig1517:212..3087+ (Phaeothamnion wetherbeei SAG_119_79)
GCACGAGTGGCGACACGGGGCCGAGCGCCATGGCGGCCATCCAGCAGACG CCAAATCTTGATGTCATTGTCATCTACCCGAGAGGACGGTGAGAAACCAG TGGTGTTAGTTCGGGAAGAAAGGAATGTCACGTCTATTGGTCCGCAATGC AAGCTCTCCGGCAGCCGTCCCAGACCGAGTTATGTTTAAAAAGGTCAGCT GGCAAGTGCTCTTGCCTCGATTCCCTCACCTTCCTCCCAGCCTGCCGCTC ATCTTGCAATGTGGTGCCCCGCATTTGGGCTGTGTTTTCACATGTGCACC CATCTGTCAGAGTGTCGCGGGTGCAGGAGGCACAGATGCTATCGATCGGG GCTGCCGCGGCGAACTGCACGGTGGCGTCGGCGGAAGGCACCAGCGACGA CATCGACGTGCCGTGCGGGCGCGTGTTCGAGGACGCCGCTTTTTGCGCCG AGCACCGCCTCGGCAGCGTCAACAGGTTGGTTGGGCTGACCACCTGGTGC CGATTCTTTCGCAGCCTTTTGCGCGGCTCGTTTTTCCCTTTTCTGTGCAG ACTTCTCCGAGCTCCCTTCTCTGCCCAGCAGTTCTCGGGGTAGCTTCCTG CGTAGCCTTTTGTTCTGCGTTTCCGGTCTCGTGGACGCCGCGTGTTGGAG TGTCGCTCTTTGCTCTCGCGGCAAACTGGCAAATCAGCCCACTTGTCTTG TTCTTCCCTTTCCTGTCCTGCTCATTCTGGTTTTGCTATCGCGTCCGTCG TACGTCCGTCGGCAGCATCAACGTGCTGCGCCTCTTGGGACAGGTGACGC ACTTCTTTTACGCCTACTTTCAACTCTATAAGGACCATGCCTGCTGGGAA AGCAACGCCGATGCCGCCGCTTCCGCCGCTTCCGCCGCCCCCGCCGCCGC CCCGACAGCTGGCGTTCCGGGCGCCGGCGGCGATGGTGCGAAGCCGCTGC CGACGGTCTCGTTTTCGATCCCGACGGGCGCCGCTGGCCATTTGACGGCG GGGCTCATCGCCAAGCTGATGGGGCTCCCCGTGGAGCGCTTCGTGGTCGC CAACAACAAGAACCACGTCATTGATAGGTGCGGCGAGGAGTGACACCGCA TGCCACCGCTGACCTCCTCCTTTGTGGGGTGTTCGGCTTTCGGAAGCATT GGGCTCATCGTAGCATGAATCGCTCAGGAGGTTGCCGTTTGTACATGGCT GGGCATTTTCGCCGCCCTGCAGAGGAAGTCGGCTGTCATGCTTGGCCGTT CTGCAACGAACCAAACCCGTTGGCTCATTCGCCTTCACCTCCACTTTTCT TCGCTTCTTGCCAAACCTAGCGACATTTGCAAACTGAAACTGCCACCGCC GCCGCCGCCATCGCAGGATGCTGAGGGAAGGCGTCCTCCAAGTTAGCAGT TTCGTCCACCACACCAACTCGCCGGCGATGGACATTGCGGCACCCTACAA CATCGAGCGGGTGCTGTGGCTCGTCGACAGCCAGAACGGCGAGGTAAGGA AACGTTGGAGGTTTCGATACGGGCAGTCGGTTTCGATTGCTGTTTGACGA CGGTTTCAGGCCGTGTGTGGTGACAGCAACCTCCCTTTCTCGCACTGCTT TCCAGCGCGTCGGTGAGTGGATGCGGGCCTTCAACGCTGGCGAGGCCGTC CGCCTTCCCACGTCGGTGATGACGGCCTTCGCGGCGCACGGCGTGGTATC GGCGTCGGTGGCCGACGGCGGTCCGGATGGCGTCCTCGGCTGCATCCGCA CCATCCGGCGGGAGTCCGGCTACCTGCTGGACCCACACTCGGCGGTGGGC GTGGCGGCGGCGTGGAAGATGGCGGAGGAAGGTGAGGCAGCAGGCAGCGG GGCGTTGGAAAGTCTTCAAAGGACTCGATGGCACAGCGGCGGCGACGGCG AGGCGGCCTATTGCCGCCTGTTGGATTGGAGTTGAGCTTTTAATTTCCTC TTCTCTTCGTTGACCTACTCAGTGACATTCCCTGAGCTATAGCTCATCTA CGCTGGTTTCGTTCACAAGCTCAAGTTCACGCGTGTCCAAGACTCTTTTG TCTCGCTGCGACTTTTTCCATTTCGTTTTCTCCTCCCAGGCCTGCTGCAC GGTCCGGTGGTGTGCATGGGGTGCGCCCACCCGGCCAAATTCGTCGAGAC GGTAGCCGAAGCGCTCGAGATTGGGCCGGACGAGGCCGCTACGGCCGTGA TGGACCCCGACCAGCCGTGCGTGACGGCGGTCATCGAGACGACGAGCGGT GAGGATAGCAATGCGCCGGCCAGACTTTTGTGGTATCGCTGAGGAGGTGG TTACCGATTTCGCAGGCCCCAACTTCTTTTCAGTGAGTGGAATGCTGTAG CATTACCTGGGAGGGAGCTGGCCTTACCGGACCCGCCTTAGCGCAATTTT TACGCCGCTCTACTCCGTTCGCTTGCTCTGCCTTATTCTGTTTGACCTGG TCTTCTTTCCGCGGGCCGCCTGCAACTGTCTCGGTAGGTTCGTTTTCCGC AGACTCCGTTCCGCTGTGGAAGGCCGGGGAAGACTGGACTCCGCTGCTGA AGAAGATGATCGTAGAAGTCACCGAAAGAAGGGCGACGGAGGCAGCGGCA GCGCCGTTGTAAACAACTAACGGCCTTAGGAGCGAGAGTTGTGAGTACCA GAAGAGCTCTGTTCTTATAACTACTGTATCGTTGATGGAAGCCAGGCGAT AGATATTCGGTTTGGCGATTGGTGAAACAACGAAACTGGGGTGAGGCGCG GCGTTTCAGGAAATAGAAACGGCGGTGCTGCCTTATGTCCTGAAAGATGC GGGCACAGCGCTAAGCGCGGTCAAAGGTCAAAGCATCGCTCAATATGCAC TAATAGAGAGAAAAACAAGTGATGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1517:212..3087+

>mRNA_P-wetherbeei_contig1517.1.1 ID=mRNA_P-wetherbeei_contig1517.1.1|Name=mRNA_P-wetherbeei_contig1517.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1185bp|location=Sequence derived from alignment at P-wetherbeei_contig1517:212..3087+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCACGTCTATTGGTCCGCAATGCAAGCTCTCCGGCAGCCGTCCCAGA
CCGAGTTATGTTTAAAAAGGTCAGCTGGCAAGTGCTCTTGCCTCGATTCC
CTCACCTTCCTCCCAGCCTGCCGCTCATCTTGCAATGTGGTGCCCCGCAT
TTGGGCTGTGTTTTCACATGTGCACCCATCTGTCAGAGTGTCGCGGGTGC
AGGAGGCACAGATGCTATCGATCGGGGCTGCCGCGGCGAACTGCACGGTG
GCGTCGGCGGAAGGCACCAGCGACGACATCGACGTGCCGTGCGGGCGCGT
GTTCGAGGACGCCGCTTTTTGCGCCGAGCACCGCCTCGGCAGCGTCAACA
GCATCAACGTGCTGCGCCTCTTGGGACAGCTGGCGTTCCGGGCGCCGGCG
GCGATGGTGCGAAGCCGCTGCCGACGGTCTCGTTTTCGATCCCGACGGGC
GCCGCTGGCCATTTGACGGCGGGGCTCATCGCCAAGCTGATGGGGCTCCC
CGTGGAGCGCTTCGTGGTCGCCAACAACAAGAACCACGTCATTGATAGGA
TGCTGAGGGAAGGCGTCCTCCAAGTTAGCAGTTTCGTCCACCACACCAAC
TCGCCGGCGATGGACATTGCGGCACCCTACAACATCGAGCGGGTGCTGTG
GCTCGTCGACAGCCAGAACGGCGAGCGCGTCGGTGAGTGGATGCGGGCCT
TCAACGCTGGCGAGGCCGTCCGCCTTCCCACGTCGGTGATGACGGCCTTC
GCGGCGCACGGCGTGGTATCGGCGTCGGTGGCCGACGGCGGTCCGGATGG
CGTCCTCGGCTGCATCCGCACCATCCGGCGGGAGTCCGGCTACCTGCTGG
ACCCACACTCGGCGGTGGGCGTGGCGGCGGCGTGGAAGATGGCGGAGGAA
GGCCTGCTGCACGGTCCGGTGGTGTGCATGGGGTGCGCCCACCCGGCCAA
ATTCGTCGAGACGGTAGCCGAAGCGCTCGAGATTGGGCCGGACGAGGCCG
CTACGGCCGTGATGGACCCCGACCAGCCGTGCGTGACGGCGGTCATCGAG
ACGACGAGCGGTTCGTTTTCCGCAGACTCCGTTCCGCTGTGGAAGGCCGG
GGAAGACTGGACTCCGCTGCTGAAGAAGATGATCGTAGAAGTCACCGAAA
GAAGGGCGACGGAGGCAGCGGCAGCGCCGTTGTAA
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