mRNA_P-wetherbeei_contig15137.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15137.1.1 vs. uniprot
Match: A0A2V0NM77_9CHLO (SET domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NM77_9CHLO) HSP 1 Score: 75.5 bits (184), Expect = 6.090e-13 Identity = 51/132 (38.64%), Postives = 67/132 (50.76%), Query Frame = 1
Query: 82 LQGSSSRTFEAWARSEGISFADLAQADFAGLRGLTASRPIAAGEALVTVPRHLLLSALXXXXXXXXXXXXVTSANVADGSGASVGGVSPRPPPVPPAIWAAAPWWVRLALLLLWERARGAASLWAPYIEYLP 477
L+ S++ F AWAR G SF L A FAGLRGL A+ PI A + +++VPR ++ P P V PA W AAPW+VRL + LL ERA+G +S APY++ LP
Sbjct: 72 LEDSATAAFLAWARGAGASFERLRPASFAGLRGLAAAAPIKADDLILSVPRGAAITLPPKQRC-------------------------PCPEFVTPAFWDAAPWFVRLGVRLLAERAKGPSSGLAPYLQQLP 178
BLAST of mRNA_P-wetherbeei_contig15137.1.1 vs. uniprot
Match: E1ZF90_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZF90_CHLVA) HSP 1 Score: 58.9 bits (141), Expect = 3.340e-7 Identity = 48/127 (37.80%), Postives = 60/127 (47.24%), Query Frame = 1
Query: 100 RTFEAWARSEGISFADLAQADFAGLRGLTASRPIAAGEALVTVPRHLLLSALXXXXXXXXXXXXVTSANVADGSGASVGGVSPRPPPVPPAIWAAAPWWVRLALLLLWERARG-AASLWAPYIEYLP 477
+ + +WA GI L QA F GLRG A IAA E VTVPR L V + N P P V P + APW+V++A+LLLWER +G +S+W YIE LP
Sbjct: 65 KDYLSWATEAGILSPKLMQAYFGGLRGGQALSDIAADEVFVTVPRGAAL---------------VVAPNER----------CPCPDFVDPGFYKEAPWFVKMAVLLLWERRKGRGSSVWG-YIEQLP 165
BLAST of mRNA_P-wetherbeei_contig15137.1.1 vs. uniprot
Match: A0A0D2JXF2_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2JXF2_9CHLO) HSP 1 Score: 57.0 bits (136), Expect = 1.340e-6 Identity = 41/132 (31.06%), Postives = 60/132 (45.45%), Query Frame = 1
Query: 82 LQGSSSRTFEAWARSEGISFADLAQADFAGLRGLTASRPIAAGEALVTVPRHLLLSALXXXXXXXXXXXXVTSANVADGSGASVGGVSPRPPPVPPAIWAAAPWWVRLALLLLWERARGAASLWAPYIEYLP 477
+Q + + F WA++ G++F L A + GLRGL A+ PI + +++VPR L+ P P V W AAPW+ RL + LL ERA+G AS Y++ LP
Sbjct: 61 IQDAVTTAFLDWAKAAGVAFDRLRPAAYGGLRGLAAAAPIKTDDLILSVPRAAALTLPPRQRC-------------------------PCPEYVTAEFWDAAPWFARLGVRLLAERAKGGASRLQRYLQQLP 167
BLAST of mRNA_P-wetherbeei_contig15137.1.1 vs. uniprot
Match: A0A8J9RJJ1_9CHLO (Probable actin-histidine N-methyltransferase n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RJJ1_9CHLO) HSP 1 Score: 55.5 bits (132), Expect = 5.260e-6 Identity = 47/134 (35.07%), Postives = 62/134 (46.27%), Query Frame = 1
Query: 94 SSRTFEAWARSEGISFADLAQADFAGLRGLTASRPIAAGEALVTVPRHLLLSALXXXXXXXXXXXXVTSANVADGSGASVGGVSPRPPPVPPA------IWAAAPWWVRLALLLLWERARGAASLWAPYIEYLP 477
SS + WA GI L ADFAGLRG+ A+ IA G+ LV++P VT+A V VSP+ PA ++ PW+V++AL LL+ER G S APY+ LP
Sbjct: 69 SSSNIQQWALQLGIQCPKLTVADFAGLRGMAATADIAGGDVLVSLP--------------------VTAALV----------VSPKERSQLPASFCSGAFYSKKPWYVQMALKLLYERKLGPESKLAPYVAALP 172
BLAST of mRNA_P-wetherbeei_contig15137.1.1 vs. uniprot
Match: I0ZAR5_COCSC (SET domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0ZAR5_COCSC) HSP 1 Score: 55.5 bits (132), Expect = 5.710e-6 Identity = 46/130 (35.38%), Postives = 62/130 (47.69%), Query Frame = 1
Query: 106 FEAWARSEGISFADLAQADFAGLRGLTASRPIAAGEALVTVPRHLLLSALXXXXXXXXXXXXVTSANVADGSGASVGGVSPRPPPVPP------AIWAAAPWWVRLALLLLWERARGAASLWAPYIEYLP 477
F+ WA GI+ L A+FAGLRG+ A+ IA GE LV++P V +A V VSP+ P A ++ PW+V++AL LL+ER G AS APY+ LP
Sbjct: 77 FQEWALQSGITSPSLRLAEFAGLRGMAAADNIAKGEVLVSLP--------------------VAAALV----------VSPKERSQLPGTFCSSAFYSKKPWYVQMALNLLYERQLGPASKLAPYVAALP 176
BLAST of mRNA_P-wetherbeei_contig15137.1.1 vs. uniprot
Match: A0A6H5KJ57_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ57_9PHAE) HSP 1 Score: 53.9 bits (128), Expect = 1.900e-5 Identity = 43/132 (32.58%), Postives = 54/132 (40.91%), Query Frame = 1
Query: 100 RTFEAWARSEGI--SFADLAQADFAGLRGLTASRPIAAGEALVTVPRHLLLSALXXXXXXXXXXXXVTSANVADGSGASVGGVS----PRPPPVPPAIWAAAPWWVRLALLLLWERARGAASLWAPYIEYLP 477
+ FE W G S L+ ADF GL GL + + + TVP L L + A +GA+ G P PPP+ W PWWVRL + LL ERA G S Y+ LP
Sbjct: 113 QAFEGWTARAGCRGSSGSLSHADFDGLPGLMTKVAVPPWQPIATVPESLFLRE-------EFLFVPCSPTAAASDAGAAAGTERTQRLPPPPPLSVEAWQRCPWWVRLGVRLLKERADGEGSRLQEYVGMLP 237
BLAST of mRNA_P-wetherbeei_contig15137.1.1 vs. uniprot
Match: A0A8J4F2B9_9CHLO (SET domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F2B9_9CHLO) HSP 1 Score: 53.5 bits (127), Expect = 2.480e-5 Identity = 41/133 (30.83%), Postives = 61/133 (45.86%), Query Frame = 1
Query: 82 LQGSSSRTFEAWARSEG-ISFADLAQADFAGLRGLTASRPIAAGEALVTVPRHLLLSALXXXXXXXXXXXXVTSANVADGSGASVGGVSPRPPPVPPAIWAAAPWWVRLALLLLWERARGAASLWAPYIEYLP 477
L S ++ F +WAR I F+ + + FAG+RGL AS IA +V VPRH SA+ +P P V W +APW+ ++A ++LW + RG+ S A ++ LP
Sbjct: 59 LDDSRTQAFMSWARGPASIRFSGVRPSTFAGVRGLAASSDIATDALMVEVPRH---SAVVLAPKQR----------------------NPCPDMVTDDWWKSAPWFAKIAAMILWHKRRGSQSPLASWVAQLP 166
BLAST of mRNA_P-wetherbeei_contig15137.1.1 vs. uniprot
Match: A0A2P6TUI6_CHLSO (SET domain-containing n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TUI6_CHLSO) HSP 1 Score: 52.8 bits (125), Expect = 4.500e-5 Identity = 45/121 (37.19%), Postives = 54/121 (44.63%), Query Frame = 1
Query: 115 WARSEGISFADLAQADFAGLRGLTASRPIAAGEALVTVPRHLLLSALXXXXXXXXXXXXVTSANVADGSGASVGGVSPRPPPVPPAIWAAAPWWVRLALLLLWERARGAASLWAPYIEYLP 477
WA GI + QA F LRG A IA E VTVPR + V + N P P V A + APW+V++A+LLLWER+RG AS YIE LP
Sbjct: 78 WAGEAGIISPKMQQAYFGELRGAKALDAIAPDEIFVTVPRAAAV---------------VVAPNER----------CPCPDFVDAAFYKEAPWFVKMAVLLLWERSRGRASPVWGYIEQLP 173 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15137.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15137.1.1 >prot_P-wetherbeei_contig15137.1.1 ID=prot_P-wetherbeei_contig15137.1.1|Name=mRNA_P-wetherbeei_contig15137.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=159bp AQALKAGPSLHATPGTTENMAPQTSRPLQGSSSRTFEAWARSEGISFADLback to top mRNA from alignment at P-wetherbeei_contig15137:114..590+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15137.1.1 ID=mRNA_P-wetherbeei_contig15137.1.1|Name=mRNA_P-wetherbeei_contig15137.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=477bp|location=Sequence derived from alignment at P-wetherbeei_contig15137:114..590+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15137:114..590+ >mRNA_P-wetherbeei_contig15137.1.1 ID=mRNA_P-wetherbeei_contig15137.1.1|Name=mRNA_P-wetherbeei_contig15137.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=477bp|location=Sequence derived from alignment at P-wetherbeei_contig15137:114..590+ (Phaeothamnion wetherbeei SAG_119_79)back to top |