mRNA_P-wetherbeei_contig15134.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15134.2.1
Unique NamemRNA_P-wetherbeei_contig15134.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15134.2.1 vs. uniprot
Match: D8LQI2_ECTSI (NAD(P)H-Nitrate reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQI2_ECTSI)

HSP 1 Score: 306 bits (784), Expect = 8.280e-96
Identity = 148/227 (65.20%), Postives = 181/227 (79.74%), Query Frame = 1
Query:    4 ALPLAEKEVLTHNSRRFRFALPTPEHVLGLPVGKHVFVSGKRKGTTEFVMRAYTPATGDELKGFVDLVVKVYKPCERFPQGGKMSQLLDELEIGETVDFKGPLGEITYLGDSAFDVKGRLRHFPCVAMLAGGTGITPMYQVIRAVLADPADGTALSLVYANQSEDDILLRGELDALVARHPDRFRVWYTIDKPNDPAAWKFSVGFIDEEMLRAHLPEAGEGSVALMC 684
            A+PL EKEVL+H+SRRFRF LPT +H LGLP+GKH FVSGK  G  EFVMR YTP TGDE+ G+VDLV+KVY P +RFP+GGKMSQ+LD L+IG+T+D KGP+GEI YL    F +KG+ R+   +AMLAGGTGITPMYQVI+AVL+DPAD T  SL+YANQ+E+DILLR ELDAL   +PDRF++WYTID+P+    WK+  GFI +EM  AHLPEA   ++A MC
Sbjct:  578 AVPLIEKEVLSHDSRRFRFELPTKDHKLGLPIGKHFFVSGKWNG--EFVMRPYTPVTGDEVSGYVDLVIKVYTPNDRFPKGGKMSQMLDALDIGDTIDIKGPVGEIVYLEPGQFLIKGKPRNANKLAMLAGGTGITPMYQVIKAVLSDPADTTLCSLIYANQTEEDILLRDELDALAKANPDRFKLWYTIDRPSGD--WKYDKGFISKEMCEAHLPEASPETIAFMC 800          
BLAST of mRNA_P-wetherbeei_contig15134.2.1 vs. uniprot
Match: A0A835YIE1_9STRA (Nitrate reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIE1_9STRA)

HSP 1 Score: 305 bits (781), Expect = 4.570e-95
Identity = 154/231 (66.67%), Postives = 183/231 (79.22%), Query Frame = 1
Query:    7 LPLAEKEVLTHNSRRFRFALPTPEHVLGLPVGKHVFVSGKRKGTTEFVMRAYTPATGDELKGFVDLVVKVYKPCERFPQGGKMSQLLDELEIGETVDFKGPLGEITYLGDSAFDVKGR----LRHFPCVAMLAGGTGITPMYQVIRAVLADPADGTALSLVYANQSEDDILLRGELDALVARHPDRFRVWYTIDKP-NDPAAWKFSVGFIDEEMLRAHLPEAGEGSVALMC 684
            +PL E+E LTH++RR RF LP+P H LGLPVGKH+F+SG+ KG  EFVMRAYTP TGDE++G+VDLVVKVY+PCERFP+GGKMSQLLD L +G+T+D KGPLGEI YLG SAF ++      +RH   V MLAGGTGITPMYQV RAVL+DPAD T L L+ ANQ+EDDILLR ELDALVA HP R RV YT+D+   D AAW +S GFI +EM+ AHLP A + +VA MC
Sbjct:  611 VPLIEREELTHDTRRLRFGLPSPAHRLGLPVGKHLFISGQWKG--EFVMRAYTPITGDEVRGYVDLVVKVYRPCERFPEGGKMSQLLDSLALGDTLDLKGPLGEIEYLGRSAFAIRNAPPRTVRH---VGMLAGGTGITPMYQVARAVLSDPADDTRLWLLAANQTEDDILLRNELDALVAAHPQRLRVHYTVDRVVGDAAAWPYSTGFITKEMIAAHLPPAADDAVAFMC 836          
BLAST of mRNA_P-wetherbeei_contig15134.2.1 vs. uniprot
Match: UPI0015B14592 (NADH-cytochrome b5 reductase 3-like n=1 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015B14592)

HSP 1 Score: 255 bits (652), Expect = 6.880e-82
Identity = 123/236 (52.12%), Postives = 173/236 (73.31%), Query Frame = 1
Query:    1 FALPLAEKEVLTHNSRRFRFALPTPEHVLGLPVGKHVFVSGKRKGTTEFVMRAYTPATGDELKGFVDLVVKVY--KPCERFPQGGKMSQLLDELEIGETVDFKGPLGEITYLGDSAFDVK------GRLRHFPCVAMLAGGTGITPMYQVIRAVLADPADGTALSLVYANQSEDDILLRGELDALVARHPDRFRVWYTIDKPNDPAAWKFSVGFIDEEMLRAHLPEAGEGSVALMC 684
            + L L +KEVL+H++RRFRFALP+P+H+LGLPVGKHV++S +  G  + V+R YTP + D+ KGFVD+VVK+Y      +FP+GGKMSQ L+ L++GETVDF+GP G + YLG   F V+      G ++    + ++AGGTGITPM Q++RA++ +P D T  SL++ANQ+E DILLR EL+ + ARHPDRF++W T+DK   PA W FS GF++ +M++ HLP  GE ++ LMC
Sbjct:   45 YQLRLIDKEVLSHDTRRFRFALPSPQHILGLPVGKHVYLSARIDG--DIVVRPYTPVSSDDDKGFVDIVVKIYFRDVHPKFPEGGKMSQYLESLQVGETVDFRGPGGLLEYLGHGQFSVQPDKKSAGEMKMAKSLGLIAGGTGITPMLQLVRAIIKNPTDKTRCSLLFANQTEKDILLRDELEEIAARHPDRFQLWLTVDKA--PADWDFSQGFVNADMIQEHLPGPGEENLVLMC 276          
BLAST of mRNA_P-wetherbeei_contig15134.2.1 vs. uniprot
Match: A8XUD9_CAEBR (NADH-cytochrome b5 reductase n=6 Tax=Caenorhabditis TaxID=6237 RepID=A8XUD9_CAEBR)

HSP 1 Score: 253 bits (645), Expect = 9.530e-81
Identity = 125/236 (52.97%), Postives = 167/236 (70.76%), Query Frame = 1
Query:    1 FALPLAEKEVLTHNSRRFRFALPTPEHVLGLPVGKHVFVSGKRKGTTEFVMRAYTPATGDELKGFVDLVVKVY--KPCERFPQGGKMSQLLDELEIGETVDFKGPLGEITYLGDSAFDVKGRL------RHFPCVAMLAGGTGITPMYQVIRAVLADPADGTALSLVYANQSEDDILLRGELDALVARHPDRFRVWYTIDKPNDPAAWKFSVGFIDEEMLRAHLPEAGEGSVALMC 684
            ++LPL EK  ++H++R+FRF LP+ +H+LGLP+G+HV++S    G  + ++R YTP + DE KGFVDL+VKVY     E+FP GGKMSQ L+ L+IG+T+ F+GP G I Y G   F +K         R F  ++M+AGGTGITPM QVI A+L DP D T + L++ANQ+EDDIL R ELD L A+HPDRFRVWYTID+P  PA WK+S GFI++ M++ +L   G  S  LMC
Sbjct:   51 YSLPLIEKFEISHDTRKFRFGLPSKDHILGLPIGQHVYLSATIDG--KLIVRPYTPVSSDEDKGFVDLMVKVYFKNTNEKFPDGGKMSQYLESLKIGDTISFRGPQGNIVYKGQGLFSLKADKKSEPTNRSFKHLSMIAGGTGITPMLQVIAAILRDPTDSTQIRLLFANQTEDDILCRQELDDLEAKHPDRFRVWYTIDRP--PAVWKYSSGFINDNMIKENLFPPGPDSAVLMC 282          
BLAST of mRNA_P-wetherbeei_contig15134.2.1 vs. uniprot
Match: A0A3P9A5K8_ESOLU (NADH-cytochrome b5 reductase n=2 Tax=Esox lucius TaxID=8010 RepID=A0A3P9A5K8_ESOLU)

HSP 1 Score: 252 bits (643), Expect = 1.440e-80
Identity = 118/236 (50.00%), Postives = 171/236 (72.46%), Query Frame = 1
Query:    1 FALPLAEKEVLTHNSRRFRFALPTPEHVLGLPVGKHVFVSGKRKGTTEFVMRAYTPATGDELKGFVDLVVKVYKPCER--FPQGGKMSQLLDELEIGETVDFKGPLGEITYLGDSAFDVK------GRLRHFPCVAMLAGGTGITPMYQVIRAVLADPADGTALSLVYANQSEDDILLRGELDALVARHPDRFRVWYTIDKPNDPAAWKFSVGFIDEEMLRAHLPEAGEGSVALMC 684
            ++LPL EKE ++H+++RFRFALPTP H+LGLP+G+HV++S K  G+   V+RAYTP + D+ +GFVDLVVK+Y+      +P+GGKMSQ LD + IG+ +DF+GP G + Y G+  F ++       ++R F  + M+AGGTGITPM Q+IR++ ADPAD T  SL++ANQ+E DILLR EL+ ++  HPD+  +WYT+DKP  P AWK+  GF++ +M++ HLP A    + +MC
Sbjct:   42 YSLPLTEKEDISHDTKRFRFALPTPTHILGLPIGQHVYLSAKVNGS--LVIRAYTPVSSDQDRGFVDLVVKIYRKNTHPSYPEGGKMSQHLDTMSIGDKIDFRGPNGLLVYTGNGKFAIRPDKKSEAKVRKFKHLGMIAGGTGITPMLQLIRSITADPADQTKCSLIFANQTEKDILLRKELEEVLKSHPDQLNLWYTLDKP--PPAWKYGSGFVNADMMKEHLPPASSDVLIVMC 273          
BLAST of mRNA_P-wetherbeei_contig15134.2.1 vs. uniprot
Match: A0A7N4PBZ2_SARHA (NADH-cytochrome b5 reductase n=2 Tax=Sarcophilus harrisii TaxID=9305 RepID=A0A7N4PBZ2_SARHA)

HSP 1 Score: 252 bits (643), Expect = 1.740e-80
Identity = 119/236 (50.42%), Postives = 171/236 (72.46%), Query Frame = 1
Query:    1 FALPLAEKEVLTHNSRRFRFALPTPEHVLGLPVGKHVFVSGKRKGTTEFVMRAYTPATGDELKGFVDLVVKVY--KPCERFPQGGKMSQLLDELEIGETVDFKGPLGEITYLGDSAFDVKG------RLRHFPCVAMLAGGTGITPMYQVIRAVLADPADGTALSLVYANQSEDDILLRGELDALVARHPDRFRVWYTIDKPNDPAAWKFSVGFIDEEMLRAHLPEAGEGSVALMC 684
            + LPL EK+ L+H+++ FRF LPT +HVLGLP+G+HV++S K  G    V+RAYTP + DE+KG+VDLVVK+Y      +FP+GGKMSQ LD ++IG+T+DF+GP G + Y G     ++       +++    + M+AGGTGITPM Q+IR +  DPADGT  SL++ANQ+E+DILLR EL+ +V  HP++FR+WYT+D+P  P  WK+S GFI+ +M++ HLP  G+ ++ LMC
Sbjct:   48 YPLPLIEKQELSHDTKMFRFGLPTSDHVLGLPIGQHVYLSAKVNGN--LVIRAYTPVSSDEVKGYVDLVVKIYYKNVHPKFPEGGKMSQYLDNMKIGDTIDFRGPNGLLVYNGSGKLSIRPDKKSEPKMKFAKNLGMIAGGTGITPMLQLIRHITKDPADGTKCSLIFANQTEEDILLRAELEEVVKSHPNQFRLWYTLDRP--PNDWKYSSGFINADMIKDHLPPPGDDTLILMC 279          
BLAST of mRNA_P-wetherbeei_contig15134.2.1 vs. uniprot
Match: UPI0002039E10 (NADH-cytochrome b5 reductase 2 isoform X1 n=3 Tax=Anolis carolinensis TaxID=28377 RepID=UPI0002039E10)

HSP 1 Score: 251 bits (641), Expect = 3.290e-80
Identity = 116/236 (49.15%), Postives = 170/236 (72.03%), Query Frame = 1
Query:    1 FALPLAEKEVLTHNSRRFRFALPTPEHVLGLPVGKHVFVSGKRKGTTEFVMRAYTPATGDELKGFVDLVVKVY--KPCERFPQGGKMSQLLDELEIGETVDFKGPLGEITYLGDSAFDVK------GRLRHFPCVAMLAGGTGITPMYQVIRAVLADPADGTALSLVYANQSEDDILLRGELDALVARHPDRFRVWYTIDKPNDPAAWKFSVGFIDEEMLRAHLPEAGEGSVALMC 684
            + LPL E+E ++H++RRFRF LP+ EH+LGLPVG+HV++S K  G    V+RAYTP + DE+KG+VDL++KVY      +FP+GGKMSQ LD +++G+T+DF+GP G + Y G   F +K       +++    + M+AGGTGITPM Q+IR +  DP+D T  SL++ANQ+E DILLR EL+ + A HP++F++WYT+D+P  P  WK+S GF+  +M++ HLP  G+ ++ LMC
Sbjct:   46 YPLPLIEREEISHDTRRFRFGLPSSEHILGLPVGQHVYISSKVAGN--LVIRAYTPVSSDEVKGYVDLIIKVYYKNVHPKFPEGGKMSQHLDSMKVGDTIDFRGPNGLLVYKGSGKFSIKQDKKSQAKIKWVKHLGMIAGGTGITPMLQLIRHITKDPSDKTKCSLLFANQTEQDILLRPELEDVAANHPEQFKLWYTLDRP--PQGWKYSSGFVTADMIKEHLPPPGDDTLILMC 277          
BLAST of mRNA_P-wetherbeei_contig15134.2.1 vs. uniprot
Match: A0A3B4CQP3_PYGNA (NADH-cytochrome b5 reductase n=3 Tax=Serrasalmidae TaxID=42495 RepID=A0A3B4CQP3_PYGNA)

HSP 1 Score: 250 bits (639), Expect = 7.250e-80
Identity = 120/236 (50.85%), Postives = 166/236 (70.34%), Query Frame = 1
Query:    1 FALPLAEKEVLTHNSRRFRFALPTPEHVLGLPVGKHVFVSGKRKGTTEFVMRAYTPATGDELKGFVDLVVKVY--KPCERFPQGGKMSQLLDELEIGETVDFKGPLGEITYLGDSAFDVK------GRLRHFPCVAMLAGGTGITPMYQVIRAVLADPADGTALSLVYANQSEDDILLRGELDALVARHPDRFRVWYTIDKPNDPAAWKFSVGFIDEEMLRAHLPEAGEGSVALMC 684
            + LPL EKE +TH+++RFRF LP+  HVLGLPVG+HV++S +  G+   V+RAYTP + DE +GFVDLVVKVY       FP+GGKMSQ L++++IG+++DF+GP G + Y G+  F ++       R+R F  V M+AGGTG+TPM Q+IR + ADP D T  SL++ANQ+E DILLR ELD ++  HPD+  +WYT+DKP  P  WK+S GFID  M++ HLP      + ++C
Sbjct:   49 YPLPLVEKEEITHDTKRFRFGLPSSVHVLGLPVGQHVYLSARVNGS--LVIRAYTPVSSDENQGFVDLVVKVYYKNTHPNFPEGGKMSQYLNDMKIGDSIDFRGPNGLLVYNGNGQFAIRPDKKSDARVRRFRNVGMIAGGTGVTPMLQLIRCITADPTDNTKCSLIFANQTEKDILLRKELDEVLRNHPDKLNLWYTLDKP--PQGWKYSAGFIDAAMIKEHLPPPASDVLIVLC 280          
BLAST of mRNA_P-wetherbeei_contig15134.2.1 vs. uniprot
Match: A0A0P7UII6_SCLFO (NADH-cytochrome b5 reductase n=5 Tax=Scleropages formosus TaxID=113540 RepID=A0A0P7UII6_SCLFO)

HSP 1 Score: 248 bits (634), Expect = 4.140e-79
Identity = 122/236 (51.69%), Postives = 167/236 (70.76%), Query Frame = 1
Query:    1 FALPLAEKEVLTHNSRRFRFALPTPEHVLGLPVGKHVFVSGKRKGTTEFVMRAYTPATGDELKGFVDLVVKVY--KPCERFPQGGKMSQLLDELEIGETVDFKGPLGEITYLGDSAFDVKG------RLRHFPCVAMLAGGTGITPMYQVIRAVLADPADGTALSLVYANQSEDDILLRGELDALVARHPDRFRVWYTIDKPNDPAAWKFSVGFIDEEMLRAHLPEAGEGSVALMC 684
            +ALPL EKE + H+++RFRFALP+P H+LGLP G+HV++S K  G    V+RAYTP + D+ +GFVDLVVKVY      ++P+GGKMSQ LD L IG+ VDF+GP G + Y G   F ++        + +F  V M+AGGTGITPM Q+IR+V+ DPAD T  SL++ANQ+E DILLR EL+A++  HPD+F++WYT+DK   P  W +S GF+D EM++ HLP   +  + +MC
Sbjct:   49 YALPLTEKEEINHDTKRFRFALPSPAHILGLPTGQHVYLSAKVGGN--LVIRAYTPVSSDKDQGFVDLVVKVYYKNSHPKYPEGGKMSQYLDSLSIGDRVDFRGPNGLLVYKGKGKFAIRPDKKTEPAISNFKHVGMIAGGTGITPMLQLIRSVVGDPADHTTCSLLFANQTEKDILLREELEAVLRDHPDKFKLWYTLDKA--PQGWPYSQGFVDAEMIKDHLPAPADDVLIVMC 280          
BLAST of mRNA_P-wetherbeei_contig15134.2.1 vs. uniprot
Match: W5L0R4_ASTMX (NADH-cytochrome b5 reductase n=4 Tax=Astyanax mexicanus TaxID=7994 RepID=W5L0R4_ASTMX)

HSP 1 Score: 248 bits (634), Expect = 4.270e-79
Identity = 121/236 (51.27%), Postives = 168/236 (71.19%), Query Frame = 1
Query:    1 FALPLAEKEVLTHNSRRFRFALPTPEHVLGLPVGKHVFVSGKRKGTTEFVMRAYTPATGDELKGFVDLVVKVY--KPCERFPQGGKMSQLLDELEIGETVDFKGPLGEITYLGDSAFDVK------GRLRHFPCVAMLAGGTGITPMYQVIRAVLADPADGTALSLVYANQSEDDILLRGELDALVARHPDRFRVWYTIDKPNDPAAWKFSVGFIDEEMLRAHLPEAGEGSVALMC 684
            + L L EKE ++H+++RFRF+LP+  HVLGLP+G+HV++S K  G+   V+RAYTP + DE +GFVDLVVKVY       +P GGKMSQ L++L+IG+T+DF+GP G + Y G+  F ++       ++R F  V M+AGGTGITPM Q+IR++ ADP D T  SL++ANQ+E DILLR EL+ ++  HPD+F +WYT+DKP  P  WK+S GFID  M++ HLP A    + +MC
Sbjct:   50 YPLTLTEKEEISHDTKRFRFSLPSSVHVLGLPIGQHVYLSAKVGGS--LVVRAYTPVSSDEDQGFVDLVVKVYFKNTHPSYPGGGKMSQYLNDLKIGDTIDFRGPNGLLVYNGNGQFAIRPDKKSDAKVRKFRHVGMIAGGTGITPMLQLIRSITADPTDNTKCSLIFANQTEKDILLRKELEEVLKNHPDKFNLWYTLDKP--PQGWKYSTGFIDAAMIKEHLPPAANDVLVVMC 281          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15134.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQI2_ECTSI8.280e-9665.20NAD(P)H-Nitrate reductase n=2 Tax=Ectocarpus TaxID... [more]
A0A835YIE1_9STRA4.570e-9566.67Nitrate reductase n=1 Tax=Tribonema minus TaxID=30... [more]
UPI0015B145926.880e-8252.12NADH-cytochrome b5 reductase 3-like n=1 Tax=Anguil... [more]
A8XUD9_CAEBR9.530e-8152.97NADH-cytochrome b5 reductase n=6 Tax=Caenorhabditi... [more]
A0A3P9A5K8_ESOLU1.440e-8050.00NADH-cytochrome b5 reductase n=2 Tax=Esox lucius T... [more]
A0A7N4PBZ2_SARHA1.740e-8050.42NADH-cytochrome b5 reductase n=2 Tax=Sarcophilus h... [more]
UPI0002039E103.290e-8049.15NADH-cytochrome b5 reductase 2 isoform X1 n=3 Tax=... [more]
A0A3B4CQP3_PYGNA7.250e-8050.85NADH-cytochrome b5 reductase n=3 Tax=Serrasalmidae... [more]
A0A0P7UII6_SCLFO4.140e-7951.69NADH-cytochrome b5 reductase n=5 Tax=Scleropages f... [more]
W5L0R4_ASTMX4.270e-7951.27NADH-cytochrome b5 reductase n=4 Tax=Astyanax mexi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15134contigP-wetherbeei_contig15134:741..1640 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LQI2
Preferred nameNIA1
PFAMsCyt-b5,FAD_binding_6,Mo-co_dimer,NAD_binding_1,Oxidored_molyb
Model size684
Max annot lvl2759|Eukaryota
KEGG rclassRC00168,RC02812
KEGG koko:K00326,ko:K00387,ko:K10534
KEGG ReactionR00100,R00533,R00794,R00796
KEGG Pathwayko00520,ko00910,ko00920,ko01100,ko01120,map00520,map00910,map00920,map01100,map01120
KEGG ModuleM00531
Hectar predicted targeting categoryother localisation
GOsGO:0001505,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005829,GO:0005886,GO:0006082,GO:0006807,GO:0006809,GO:0008150,GO:0008152,GO:0008940,GO:0009058,GO:0009314,GO:0009416,GO:0009605,GO:0009607,GO:0009608,GO:0009610,GO:0009620,GO:0009628,GO:0009703,GO:0009987,GO:0016020,GO:0016491,GO:0016661,GO:0017144,GO:0034641,GO:0042126,GO:0042128,GO:0042133,GO:0042136,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046209,GO:0046857,GO:0050896,GO:0051704,GO:0051707,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:0071941,GO:0071944,GO:0072593,GO:1903409,GO:2001057
Exons2
Evalue1.36e-96
EggNOG OGsCOG0543@1|root,COG2041@1|root,COG5274@1|root,KOG0534@2759|Eukaryota,KOG0535@2759|Eukaryota,KOG0537@2759|Eukaryota
EC1.6.2.2,1.7.1.1,1.7.1.2,1.7.1.3,1.8.3.1
Descriptionheme binding
Cds size684
COG categoryCI
BiGG ReactioniRC1080.CRv4_Au5_s9_g15693_t1
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186046.0054374-CDS-P-wetherbeei_contig15134:740..9831683186046.0054374-CDS-P-wetherbeei_contig15134:740..983Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15134 741..983 +
1683186046.0166972-CDS-P-wetherbeei_contig15134:1199..16401683186046.0166972-CDS-P-wetherbeei_contig15134:1199..1640Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15134 1200..1640 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15134.2.1prot_P-wetherbeei_contig15134.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15134 741..1640 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15134.2.1

>prot_P-wetherbeei_contig15134.2.1 ID=prot_P-wetherbeei_contig15134.2.1|Name=mRNA_P-wetherbeei_contig15134.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=228bp
FALPLAEKEVLTHNSRRFRFALPTPEHVLGLPVGKHVFVSGKRKGTTEFV
MRAYTPATGDELKGFVDLVVKVYKPCERFPQGGKMSQLLDELEIGETVDF
KGPLGEITYLGDSAFDVKGRLRHFPCVAMLAGGTGITPMYQVIRAVLADP
ADGTALSLVYANQSEDDILLRGELDALVARHPDRFRVWYTIDKPNDPAAW
KFSVGFIDEEMLRAHLPEAGEGSVALMC
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mRNA from alignment at P-wetherbeei_contig15134:741..1640+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15134.2.1 ID=mRNA_P-wetherbeei_contig15134.2.1|Name=mRNA_P-wetherbeei_contig15134.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=900bp|location=Sequence derived from alignment at P-wetherbeei_contig15134:741..1640+ (Phaeothamnion wetherbeei SAG_119_79)
TTTGCGCTGCCGCTGGCGGAGAAGGAGGTGCTGACGCACAACTCGCGGCG GTTCCGCTTCGCGTTGCCGACGCCGGAGCACGTGCTGGGGCTGCCAGTGG GCAAGCACGTCTTTGTGTCGGGCAAGCGGAAGGGCACAACTGAGTTCGTG ATGCGGGCTTATACACCGGCGACGGGCGACGAGCTGAAGGGATTCGTCGA CCTCGTCGTAAAGGTTTACAAGCCCTGCGAGCGCTTCCCGCAGGTCAGTC AAACGTGTTGGTCCGCCGAATTTCTTATTTTTAGAGTCAGTTCATCGTTT TCAACATGATTTGATCCTCCTTTGTCTGCTTTTTCCTCTTGAATTGATGC GTTCCGCTTTTCGCTTCTCTTTAGTACCCAGCTGCTTTGACTAAATAGAA TCTGACAGTTACCCCTTGTGGTCTGCTGCTTTTCTGCCCGTCTTGTCTGC TTCTCGCAGGGCGGCAAGATGTCGCAGCTACTGGACGAGCTCGAGATCGG CGAGACAGTCGACTTCAAGGGCCCCCTCGGCGAGATCACCTACCTTGGCG ACTCGGCCTTCGATGTCAAAGGCCGCCTCCGCCATTTCCCGTGCGTCGCC ATGCTTGCCGGCGGCACGGGCATCACGCCCATGTACCAGGTAATCCGGGC GGTGCTGGCCGACCCGGCCGATGGCACGGCGCTTTCGCTCGTCTACGCCA ACCAGTCGGAGGACGACATCTTGCTGCGCGGGGAGCTCGATGCGCTGGTG GCACGCCACCCGGACCGCTTCCGCGTGTGGTACACGATCGACAAGCCGAA CGACCCCGCGGCGTGGAAGTTCTCGGTGGGTTTCATCGACGAGGAGATGC TGCGGGCGCACCTGCCAGAGGCCGGCGAGGGCTCGGTGGCACTCATGTGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15134:741..1640+

>mRNA_P-wetherbeei_contig15134.2.1 ID=mRNA_P-wetherbeei_contig15134.2.1|Name=mRNA_P-wetherbeei_contig15134.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=684bp|location=Sequence derived from alignment at P-wetherbeei_contig15134:741..1640+ (Phaeothamnion wetherbeei SAG_119_79)
TTTGCGCTGCCGCTGGCGGAGAAGGAGGTGCTGACGCACAACTCGCGGCG
GTTCCGCTTCGCGTTGCCGACGCCGGAGCACGTGCTGGGGCTGCCAGTGG
GCAAGCACGTCTTTGTGTCGGGCAAGCGGAAGGGCACAACTGAGTTCGTG
ATGCGGGCTTATACACCGGCGACGGGCGACGAGCTGAAGGGATTCGTCGA
CCTCGTCGTAAAGGTTTACAAGCCCTGCGAGCGCTTCCCGCAGGGCGGCA
AGATGTCGCAGCTACTGGACGAGCTCGAGATCGGCGAGACAGTCGACTTC
AAGGGCCCCCTCGGCGAGATCACCTACCTTGGCGACTCGGCCTTCGATGT
CAAAGGCCGCCTCCGCCATTTCCCGTGCGTCGCCATGCTTGCCGGCGGCA
CGGGCATCACGCCCATGTACCAGGTAATCCGGGCGGTGCTGGCCGACCCG
GCCGATGGCACGGCGCTTTCGCTCGTCTACGCCAACCAGTCGGAGGACGA
CATCTTGCTGCGCGGGGAGCTCGATGCGCTGGTGGCACGCCACCCGGACC
GCTTCCGCGTGTGGTACACGATCGACAAGCCGAACGACCCCGCGGCGTGG
AAGTTCTCGGTGGGTTTCATCGACGAGGAGATGCTGCGGGCGCACCTGCC
AGAGGCCGGCGAGGGCTCGGTGGCACTCATGTGC
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