mRNA_P-wetherbeei_contig15127.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15127.1.1
Unique NamemRNA_P-wetherbeei_contig15127.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15127.1.1 vs. uniprot
Match: A0A3B3SLA7_9TELE (Uncharacterized protein n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3SLA7_9TELE)

HSP 1 Score: 167 bits (422), Expect = 1.680e-40
Identity = 103/272 (37.87%), Postives = 151/272 (55.51%), Query Frame = 1
Query:  652 PGEVALLSQCYMERGVLKRKQWRGDRNSPNDQYIVPKALRDVVLLAMHEDATAGHQGTNRTLARVLESFWWPTVTADTAWWCRACLKCQARKSRLMRKLPLCVPTRPSEPGEMLGIDILGPLPQSEEGYLYLLVMVDLFTRWVELAPLTAVTNTAVGVAEQLVDLILCRGVAPRKIVSDRGKHFTAKVSQALYDYMRTKKATTTAYRPQSDGQAERVMPQVAAYLSMYVSDYQADWPKYLHLMRLALNTAVCRVTGVSPHELATGRKPRLPW 1467
            P  +A + Q     G++ R+  +GD+   N Q +VP+ LR  V    H++   GH G  +TL R++E  WWPTV  DT  + R C  CQ  K        L   T  +EPGEMLG+D++GP P+S  G   LLV+VD FT+WVEL PL   T+TA  +A+ LV  I  R   P+ +VSDRG  FT+++ + +          TT+Y PQ++   ERV   + + ++ +V +   +W  +L   R A+N+AV   TG SP +LA GR  + P+
Sbjct: 1087 PSRIAFVDQ----NGIIYRRVPKGDQGF-NYQLVVPEVLRLPVQHHYHDNPLGGHLGRLKTLLRIIEVAWWPTVRQDTWTYVRNCHTCQRYKPSNKPPAGLLQSTPITEPGEMLGVDLMGPFPRSGRGNSILLVVVDYFTKWVELFPLR--TSTAPKIADVLVKEIFTRWGTPKFLVSDRGSQFTSQIFREVCKTWGVLNKFTTSYHPQTN-LTERVNRTLKSMIASFVEEEHRNWDTWLAEFRFAINSAVQESTGHSPAQLALGRSLKGPF 1350          
BLAST of mRNA_P-wetherbeei_contig15127.1.1 vs. uniprot
Match: A0A7D9ER82_PARCT (Retrovirus-related Pol poly from transposon (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9ER82_PARCT)

HSP 1 Score: 166 bits (419), Expect = 2.480e-40
Identity = 94/267 (35.21%), Postives = 139/267 (52.06%), Query Frame = 1
Query:  664 ALLSQCYMERGVLKRKQWRGDRNSPNDQYIVPKALRDVVLLAMHEDATAGHQGTNRTLARVLESFWWPTVTADTAWWCRACLKCQARKSRLMRKLPLCVPTRPSEPGEMLGIDILGPLPQSEEGYLYLLVMVDLFTRWVELAPLTAVTNTAVGVAEQLVDLILCRGVAPRKIVSDRGKHFTAKVSQALYDYMRTKKATTTAYRPQSDGQAERVMPQVAAYLSMYVSDYQADWPKYLHLMRLALNTAVCRVTGVSPHELATGRKPRLP 1464
            A      +   +L RK    D  +   Q ++PKALR+ VL+ +H   T GH G  +TL RV E F+WP    D   WC  C +C +RK  + R+           P E + ID++GPL +S +G  YLLV++D F++W E   L      A  VA  +V+  +CR   P ++ SD+G +F + V Q +   +  KK  TT   P+SDG  ER    +   LS++V+++Q DW KY+ L+ +A  TA    T  +P  L  GR+ R P
Sbjct:  466 AQWDSLCLRNDILYRKWESSDGTTTRFQLVLPKALREEVLMHLHNHPTGGHFGVKKTLERVKERFYWPRCREDVTLWCSTCSECSSRKGPVTRQKACLGKYVVGAPLERVAIDVMGPLVRSTKGNRYLLVVMDYFSKWPEAYALP--NQEAKTVATVIVNEFVCRFGVPLELHSDQGTNFESAVFQEMCSLLGIKKTRTTPLHPESDGMVERYNRTLKTQLSLFVAEHQKDWDKYVPLLLMAYRTATHASTHFTPARLMMGREIRTP 730          
BLAST of mRNA_P-wetherbeei_contig15127.1.1 vs. uniprot
Match: A0A814JIM8_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A814JIM8_9BILA)

HSP 1 Score: 159 bits (402), Expect = 2.780e-40
Identity = 91/281 (32.38%), Postives = 150/281 (53.38%), Query Frame = 1
Query:  655 GEVALLSQCYMERGVLKRKQWRGDRNSPNDQYIVPKALRDVVLLAMHEDATAGHQGTNRTLARVLESFWWPTVTADTAWWCRACLKCQARKSRLMRKLPLCVPTRPSEPGEMLGIDILGPLPQSEEGYLYLLVMVDLFTRWVELAPLTAVTNTAVGVAEQLVDLILCRGVAPRKIVSDRGKHFTAKVSQALYDYMRTKKATTTAYRPQSDGQAERVMPQVAAYLSMYVSDYQADWPKYLHLMRLALNTAVCRVTGVSPHELATGRKPRLPWAAMALESADY 1497
            GE     + +++  VL +K     +  P D+ +VPK L + VL   H+  + GH G  +T A+V +S+ W  +  DT+ W R+C  C   K+   ++  L      ++P +M+G+DILGPLP++     Y+++  D  ++W E   L      A  +A+ L++L++ R   P K++SD+G+ F A + + + +YM  KK +TT Y P+ +GQ ER    +   LS Y +D+Q+DW ++L +   A   +    T  SP EL  GR PRLP  +     A Y
Sbjct:   56 GEKDKFGRYFLKDNVLCKKY----KKYP-DKILVPKKLVESVLSTCHDGLSGGHLGFKKTYAKVKQSYLWNNMLRDTSKWIRSCKVCAQIKNPKPKRANLIPIEGATKPFDMVGVDILGPLPETGRRNKYIVIFTDYLSKWAE--ALATDRIDAKTIAKILLNLVITRHSVPGKLLSDQGRQFLAALVKEVCEYMNIKKLSTTPYHPECNGQTERFNKTICQILSTYCNDHQSDWDEFLDVSLFAYRVSPHETTFKSPFELLYGRNPRLPGESSKYVDAKY 329          
BLAST of mRNA_P-wetherbeei_contig15127.1.1 vs. uniprot
Match: A0A7D9H748_PARCT (RNA-directed DNA polymerase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9H748_PARCT)

HSP 1 Score: 165 bits (417), Expect = 6.650e-40
Identity = 94/267 (35.21%), Postives = 139/267 (52.06%), Query Frame = 1
Query:  664 ALLSQCYMERGVLKRKQWRGDRNSPNDQYIVPKALRDVVLLAMHEDATAGHQGTNRTLARVLESFWWPTVTADTAWWCRACLKCQARKSRLMRKLPLCVPTRPSEPGEMLGIDILGPLPQSEEGYLYLLVMVDLFTRWVELAPLTAVTNTAVGVAEQLVDLILCRGVAPRKIVSDRGKHFTAKVSQALYDYMRTKKATTTAYRPQSDGQAERVMPQVAAYLSMYVSDYQADWPKYLHLMRLALNTAVCRVTGVSPHELATGRKPRLP 1464
            A      +   +L RK    D  +   Q ++PKALR+ VL+ +H   T GH G  +TL RV E F+WP    D   WC  C +C +RK  + R+           P E + ID++GPL +S +G  YLLV++D F++W E   L      A  VA  +V+  +CR   P ++ SD+G +F + V Q +   +  KK  TT   P+SDG  ER    +   LS++V+++Q DW KY+ L+ +A  TA    T  +P  L  GR+ R P
Sbjct:  807 AQWDSLCLRNDILCRKWESSDGTTTRFQLVLPKALREEVLMHLHNHPTGGHFGVKKTLERVKERFYWPRCREDVTLWCSTCSECSSRKGPVTRQKARLGKYVVGAPLERVAIDVMGPLVRSTKGNRYLLVVMDYFSKWPEAYALP--NQEAKTVATVIVNEFVCRFGVPLELHSDQGTNFESAVFQEMCSLLGIKKTRTTPLHPESDGMVERYNRTLKTQLSLFVAEHQKDWDKYVPLLLMAYRTATHASTHFTPARLMMGREIRTP 1071          
BLAST of mRNA_P-wetherbeei_contig15127.1.1 vs. uniprot
Match: A0A8B6EGR4_MYTGA (Integrase catalytic domain-containing protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6EGR4_MYTGA)

HSP 1 Score: 164 bits (414), Expect = 8.760e-40
Identity = 100/270 (37.04%), Postives = 140/270 (51.85%), Query Frame = 1
Query:  664 ALLSQCYMERGVLKRKQWRGDRNSPNDQYIVPKALRDVVLLAMHEDATAGHQGTNRTLARVLESFWWPTVTADTAWWCRACLKCQARKSRLMRKLPLCVPTRPSEPGEMLGIDILGPLPQSEEGYLYLLVMVDLFTRWVELAPLTAV---TNTAVGVAEQLVDLILCRGVAPRKIVSDRGKHFTAKVSQALYDYMRTKKATTTAYRPQSDGQAERVMPQVAAYLSMYVSDYQADWPKYLHLMRLALNTAVCRVTGVSPHELATGRKPRLP 1464
            A   Q  + +G+L   Q   D N+   + I+PK  RD VL  +H D  +GH G  RTLAR     +WP +T D   WC+ CL CQ+RK    +            P E +G+D+LGPLPQS +G  Y+L++ D FTRW+E  P+  +   T   V +AE      + R   PR+I +D G  FT+++ + + D  R  K  TT+  PQSDG  ER    V   LS  VS  Q +W + L ++ LA  T+    TG SP  +  GR+  LP
Sbjct:  409 AKWKQLILHKGILYINQVDEDSNTILKRLIIPKIWRDEVLRMLHNDPGSGHLGVARTLARTKSRVYWPDITRDVNLWCKMCLVCQSRKRPARKARGGLGQYAVGAPMERIGMDLLGPLPQSRQGNKYILIVSDYFTRWIEAYPIPDIHAHTICRVFIAE-----FISRYGIPRQIHTDPGTQFTSQLFKEICDTFRIDKTFTTSLHPQSDGLVERFNRTVEDMLSKVVSRDQKNWDEVLPMVMLAYRTSEHDSTGQSPSMMMFGREAELP 673          
BLAST of mRNA_P-wetherbeei_contig15127.1.1 vs. uniprot
Match: L7MML3_RHIPC (RNA-directed DNA polymerase (Fragment) n=1 Tax=Rhipicephalus pulchellus TaxID=72859 RepID=L7MML3_RHIPC)

HSP 1 Score: 161 bits (408), Expect = 6.130e-39
Identity = 85/238 (35.71%), Postives = 137/238 (57.56%), Query Frame = 1
Query:  754 VPKALRDVVLLAMHEDATAGHQGTNRTLARVLESFWWPTVTADTAWWCRACLKCQARKSRLMRKLPLCVPTRPS-EPGEMLGIDILGPLPQSEEGYLYLLVMVDLFTRWVELAPLTAVTNTAVGVAEQLVDLILCRGVAPRKIVSDRGKHFTAKVSQALYDYMRTKKATTTAYRPQSDGQAERVMPQVAAYLSMYVSDYQADWPKYLHLMRLALNTAVCRVTGVSPHELATGRKPRLP 1464
            V + LR  +L+  H+D TAGH G  RTL ++ + ++WP +  +   + ++C  CQ+R     +      P  P+  P + +G+D +GPL +SE+G  Y++VM+D +T+W E   +     TA   A+  +D ++ R  AP +I++DRG+HFTA + + L+    T  A TTAY P+++G  ER    +A  +S YVS +  DW ++L  +  A N++V   TG SP  L  GR+P LP
Sbjct:  577 VRRTLRREILINCHDDITAGHLGIGRTLKKIRQRYFWPKMFKEITHYVQSCPDCQSRNVPNTKPAGELQPLEPTLYPFQQIGMDFVGPLTESEDGNKYIVVMIDYYTKWAE--AVATREATADSAAKAFLDRVVLRHGAPERIITDRGRHFTAAMMEELFRLTTTNHARTTAYHPRTNGLCERFNRTLAVMISKYVSSHHRDWDQFLQYVLFAYNSSVHETTGYSPFFLLYGREPALP 812          
BLAST of mRNA_P-wetherbeei_contig15127.1.1 vs. uniprot
Match: A0A3B4Z3E1_SERLL (Integrase catalytic domain-containing protein n=1 Tax=Seriola lalandi dorsalis TaxID=1841481 RepID=A0A3B4Z3E1_SERLL)

HSP 1 Score: 156 bits (394), Expect = 9.250e-39
Identity = 98/259 (37.84%), Postives = 141/259 (54.44%), Query Frame = 1
Query:  697 VLKRKQWRGDRNSPNDQYI---VPKALRDVVLLAMHEDATAGHQGTNRTLARVLESFWWPTVTADTAWWCRACLKCQARKSRLMRKLPLCVPTRPSEPGEMLGIDILGPLPQSEEGYLYLLVMVDLFTRWVELAPLTAVTNTAVGVAEQLVDLILCRGVAPRKIVSDRGKHFTAKVSQALYDYMRTKKATTTAYRPQSDGQAERVMPQVAAYLSMYVSDYQADWPKYLHLMRLALNTAVCRVTGVSPHELATGRKPRLP 1464
            VL+ K +R  + S N  +    +P +L   +L   HE   +GH G  +T  R+ E  +WP +  +   + + C+ CQ+ K+   +       T+ + P EMLGID++GPLP+S + + YLLV+VD FTRWVEL PL   T TA  VA  L   I  R   P  I+SDRG+ F ++V + L          TTAY PQ++   ERV   + + ++ YV +  A W +YL   R A+N+AV   TGV+P EL  GRK   P
Sbjct:   30 VLEDKLYRKKQLSENQHHYRLYIPHSLVQELLRDYHESPLSGHAGIFKTYKRLYEVAYWPGMWTEVKTFIKRCMVCQSLKADNQKPAGKIQQTKVTFPNEMLGIDLMGPLPRSPQRHEYLLVVVDYFTRWVELTPLR--TATAQTVARFLKSEIFTRWGVPDYILSDRGRQFVSEVFRELCAQWTVTPKLTTAYHPQTN-MTERVNRTLKSMIASYVDNNHAKWDQYLSEFRFAINSAVQETTGVTPAELQIGRKLNSP 285          
BLAST of mRNA_P-wetherbeei_contig15127.1.1 vs. uniprot
Match: A0A814M118_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A814M118_9BILA)

HSP 1 Score: 161 bits (407), Expect = 1.340e-38
Identity = 86/241 (35.68%), Postives = 135/241 (56.02%), Query Frame = 1
Query:  742 DQYIVPKALRDVVLLAMHEDATAGHQGTNRTLARVLESFWWPTVTADTAWWCRACLKCQARKSRLMRKLPLCVPTRPSEPGEMLGIDILGPLPQSEEGYLYLLVMVDLFTRWVELAPLTAVTNTAVGVAEQLVDLILCRGVAPRKIVSDRGKHFTAKVSQALYDYMRTKKATTTAYRPQSDGQAERVMPQVAAYLSMYVSDYQADWPKYLHLMRLALNTAVCRVTGVSPHELATGRKPRLP 1464
            D+ +VPK L + VL   H+  + GH G  +T A+V +S+ W  +  DT  W R+C  C   KS    +  L      ++P +M+G+DILGPLP++     Y+++  D  ++W E   L      A  +A+ L++L++ R  AP K++SD+G+ F A + + + +YM+ KK +TT Y P+ +GQ ER    +   LS Y +D+Q+DW +YL +   A   +    T  SP EL  GR PRLP
Sbjct:  782 DKILVPKKLVESVLSTCHDGLSGGHLGFKKTYAKVKQSYLWKNMLRDTNKWIRSCKMCAQIKSPQPNRANLIPIEGATKPFDMVGVDILGPLPETSRNNKYIVIFTDYLSKWAE--ALATGRIDAKTIAKILLNLVITRHSAPGKLLSDQGRQFLAALVKEVCEYMKIKKLSTTPYHPECNGQTERFNKTICQILSTYCNDHQSDWDEYLDIALFAYRVSPHETTLKSPFELLFGRNPRLP 1020          
BLAST of mRNA_P-wetherbeei_contig15127.1.1 vs. uniprot
Match: A0A7D9K8X7_PARCT (Transposon Ty3-G Gag-Pol poly (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9K8X7_PARCT)

HSP 1 Score: 160 bits (405), Expect = 1.780e-38
Identity = 107/329 (32.52%), Postives = 155/329 (47.11%), Query Frame = 1
Query:  493 GTTELRGLYDLRHP--QAWRRAQAQDPLCKRLLTRLEVARGMNGRANERGGGALQPGEVALLSQCYMERGVLKRKQWRGDRNSPND---QYIVPKALRDVVLLAMHEDATAGHQGTNRTLARVLESFWWPTVTADTAWWCRACLKCQARKSRLMRKLPLCVPTRPSEPGEMLGIDILGPLPQSEEGYLYLLVMVDLFTRWVELAPLTAVTNTAVGVAEQLVDLILCRGVAPRKIVSDRGKHFTAKVSQALYDYMRTKKATTTAYRPQSDGQAERVMPQVAAYLSMYVSDYQADWPKYLHLMRLALNTAVCRVTGVSPHELATGRKPRLP 1464
            GT    G YDL        R  Q QD     L+T LE     +     R         V    + Y++   L    W   + +  D   Q ++P AL+  VL+  H+DATAGH GT +T  ++   ++W  +  D   WC++C+ C  +KS   R     +P       + L +D LGP P S  G  Y++V  +  TRW E       T  A  +A  LV+ I+    APR ++SDRG +F + + +++ + + TKK  TTAY PQ+DG  ER    +   +SMYVS  Q DW  +L  +      +    TG SP  L  GR+PRLP
Sbjct:  552 GTQLHIGAYDLPGVPIDRIRELQRQDAELSDLITLLETDALPSNNKRARS-------FVLYGDKFYLDDNGLLFSLWTPSKRTQRDVCSQLVIPDALKHEVLVWAHDDATAGHLGTQKTYGKIRTRYYWRNMFRDIDRWCKSCVDCAMKKSPRNRHNAPLLPIPVENAFDRLAVDCLGPFPLSTAGNRYVVVFTEYLTRWPE--AFAVPTTDAPTIARLLVNHIVLTHGAPRTLLSDRGTNFLSSLVRSVCELLNTKKVNTTAYHPQTDGLVERFNHTLCQSVSMYVSRDQKDWDTHLPAILFGFRVSPQETTGDSPFYLLYGREPRLP 871          
BLAST of mRNA_P-wetherbeei_contig15127.1.1 vs. uniprot
Match: A0A1B6IHV3_9HEMI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Homalodisca liturata TaxID=320908 RepID=A0A1B6IHV3_9HEMI)

HSP 1 Score: 154 bits (389), Expect = 2.680e-38
Identity = 89/249 (35.74%), Postives = 136/249 (54.62%), Query Frame = 1
Query:  730 NSPNDQYIVPKALRDVVLLAMHEDATAGHQGTNRTLARVLESFWWPTVTADTAWWCRACLKCQARKSRLMRKLPLC-VPTRPSEPGEMLGIDILGPLPQSEEGYLYLLVMVDLFTRWVELAPLTAVTNTAVGVAEQLVDLILCRGVAPRKIVSDRGKHFTAKVSQALYDYMRTKKATTTAYRPQSDGQAERVMPQVAAYLSMYVSDYQADWPKYLHLMRLALNTAVCRVTGVSPHELATGRKPRLPWAA 1473
            +S   + +VP +L   V+   H+  TAGH G  +TL RV + FWW  +  D   + R C  C  R +    K PL  V   P EP E++  DI+GPLP SE   +Y+L ++D F+R+ E  PL     TA  VA  LV  ++ +   P+ +++D+G +FT+ +   L  ++  +K  TT + PQS+G+ ERV   +A  LS + + +Q DW +YL  + +A N+     TG SP E+  GRK  +P  A
Sbjct:   58 SSGEQKIVVPASLVPEVIRLNHDLPTAGHAGVAKTLERVRQKFWWRKMDKDVLDYVRTCRSCSQRTNYGKIKAPLGEVFNEPREPFEVIAADIVGPLPLSESRNVYILSVMDHFSRYCEFIPLP--DQTAESVARALVQRVITKFGVPKILITDQGANFTSDLISQLCKFLHVRKIQTTGFHPQSNGRLERVHSTIARMLSHFANWHQTDWDEYLPYVTMAYNSQGHESTGFSPFEMVFGRKMEMPMEA 304          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15127.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3B3SLA7_9TELE1.680e-4037.87Uncharacterized protein n=1 Tax=Paramormyrops king... [more]
A0A7D9ER82_PARCT2.480e-4035.21Retrovirus-related Pol poly from transposon (Fragm... [more]
A0A814JIM8_9BILA2.780e-4032.38Hypothetical protein n=1 Tax=Brachionus calyciflor... [more]
A0A7D9H748_PARCT6.650e-4035.21RNA-directed DNA polymerase n=1 Tax=Paramuricea cl... [more]
A0A8B6EGR4_MYTGA8.760e-4037.04Integrase catalytic domain-containing protein n=1 ... [more]
L7MML3_RHIPC6.130e-3935.71RNA-directed DNA polymerase (Fragment) n=1 Tax=Rhi... [more]
A0A3B4Z3E1_SERLL9.250e-3937.84Integrase catalytic domain-containing protein n=1 ... [more]
A0A814M118_9BILA1.340e-3835.68Hypothetical protein n=1 Tax=Brachionus calyciflor... [more]
A0A7D9K8X7_PARCT1.780e-3832.52Transposon Ty3-G Gag-Pol poly (Fragment) n=1 Tax=P... [more]
A0A1B6IHV3_9HEMI2.680e-3835.74RNA-directed DNA polymerase (Fragment) n=1 Tax=Hom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15127contigP-wetherbeei_contig15127:4..1518 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog400682.PAC_15704675
PFAMsSCAN,rve,zf-CCHC,zf-H2C2
Model size1517
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.24e-36
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,38F2S@33154|Opisthokonta,3BCWF@33208|Metazoa
DescriptionDNA integration
Cds size1515
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186045.4466283-CDS-P-wetherbeei_contig15127:3..15181683186045.4466283-CDS-P-wetherbeei_contig15127:3..1518Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15127 4..1518 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15127.1.1prot_P-wetherbeei_contig15127.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15127 4..1518 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15127.1.1

>prot_P-wetherbeei_contig15127.1.1 ID=prot_P-wetherbeei_contig15127.1.1|Name=mRNA_P-wetherbeei_contig15127.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=505bp
RNGVPTAHQEPAISRASRDSMRALAGREDVVKWGEPNDSTGACQAQAHLF
VLTAPAAVTGHDSDETESEEEDDAAWDVPVEMTPLGEAPGGETRSKAAEI
DKMTPEANDAATAQQVTRIAFKDMVDWRRPPDDLSAEDLQAHWCPSESWP
SGQARIGGETAAPMGTTELRGLYDLRHPQAWRRAQAQDPLCKRLLTRLEV
ARGMNGRANERGGGALQPGEVALLSQCYMERGVLKRKQWRGDRNSPNDQY
IVPKALRDVVLLAMHEDATAGHQGTNRTLARVLESFWWPTVTADTAWWCR
ACLKCQARKSRLMRKLPLCVPTRPSEPGEMLGIDILGPLPQSEEGYLYLL
VMVDLFTRWVELAPLTAVTNTAVGVAEQLVDLILCRGVAPRKIVSDRGKH
FTAKVSQALYDYMRTKKATTTAYRPQSDGQAERVMPQVAAYLSMYVSDYQ
ADWPKYLHLMRLALNTAVCRVTGVSPHELATGRKPRLPWAAMALESADYG
RRKEL
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mRNA from alignment at P-wetherbeei_contig15127:4..1518+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15127.1.1 ID=mRNA_P-wetherbeei_contig15127.1.1|Name=mRNA_P-wetherbeei_contig15127.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1515bp|location=Sequence derived from alignment at P-wetherbeei_contig15127:4..1518+ (Phaeothamnion wetherbeei SAG_119_79)
CGAAATGGCGTGCCCACAGCGCACCAAGAACCGGCAATCTCTCGCGCCAG TCGTGACAGCATGCGCGCGCTGGCAGGGAGAGAGGATGTAGTGAAATGGG GTGAGCCCAATGACAGCACGGGCGCATGCCAGGCGCAAGCTCACCTTTTC GTGCTGACAGCCCCGGCGGCCGTTACTGGGCATGACAGTGACGAGACGGA GTCAGAAGAGGAGGACGACGCTGCCTGGGACGTCCCCGTGGAGATGACCC CTCTAGGAGAAGCGCCTGGAGGAGAGACTCGCTCCAAGGCGGCAGAAATC GACAAGATGACGCCGGAGGCCAACGACGCAGCAACAGCACAGCAAGTGAC GCGGATCGCCTTCAAGGACATGGTTGACTGGCGGCGCCCGCCGGATGACC TCAGCGCTGAAGACCTACAAGCCCACTGGTGTCCCAGCGAGAGTTGGCCA TCAGGGCAGGCGCGCATCGGTGGCGAAACTGCGGCGCCGATGGGAACGAC GGAGCTTCGCGGACTGTATGACCTAAGGCACCCACAGGCGTGGCGACGGG CACAGGCGCAGGACCCACTCTGCAAACGGCTGCTAACGCGCCTGGAGGTC GCGCGAGGAATGAACGGACGAGCCAATGAGCGTGGCGGCGGCGCGCTGCA GCCGGGCGAAGTCGCGCTGCTAAGTCAGTGCTACATGGAACGAGGCGTCT TGAAGCGCAAGCAGTGGCGCGGTGACAGAAACAGCCCCAACGACCAGTAC ATCGTACCTAAGGCGCTTCGGGACGTCGTGTTGCTGGCCATGCACGAGGA CGCGACAGCGGGGCACCAGGGCACGAATCGGACTTTGGCGCGCGTCTTGG AGAGCTTCTGGTGGCCAACGGTGACTGCAGACACAGCCTGGTGGTGCAGA GCCTGCCTCAAATGTCAGGCGCGCAAGAGCAGACTCATGCGCAAGTTACC GCTATGTGTACCAACGCGTCCGTCGGAGCCAGGGGAAATGCTGGGCATCG ACATCCTCGGTCCGCTGCCGCAGTCAGAGGAGGGGTACCTGTACTTGCTG GTGATGGTCGACCTTTTCACACGCTGGGTGGAGCTGGCGCCGCTGACGGC CGTGACGAACACAGCTGTTGGCGTGGCGGAGCAGCTGGTCGATCTCATTC TTTGCCGAGGCGTGGCTCCGCGCAAGATTGTATCCGATCGTGGCAAGCAC TTCACCGCAAAGGTTTCCCAGGCGCTGTACGACTACATGCGCACCAAGAA GGCCACAACAACTGCTTACCGACCACAGTCGGATGGGCAAGCGGAGCGCG TCATGCCGCAAGTCGCCGCATACCTATCCATGTACGTGTCGGATTATCAG GCGGACTGGCCCAAGTACCTGCACCTCATGCGTCTGGCGCTCAACACCGC AGTGTGTCGCGTCACGGGGGTATCGCCTCACGAGCTTGCGACGGGCCGTA AGCCGCGTCTGCCGTGGGCCGCGATGGCGTTGGAGTCTGCGGACTACGGG AGGCGCAAGGAGCTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15127:4..1518+

>mRNA_P-wetherbeei_contig15127.1.1 ID=mRNA_P-wetherbeei_contig15127.1.1|Name=mRNA_P-wetherbeei_contig15127.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1515bp|location=Sequence derived from alignment at P-wetherbeei_contig15127:4..1518+ (Phaeothamnion wetherbeei SAG_119_79)
CGAAATGGCGTGCCCACAGCGCACCAAGAACCGGCAATCTCTCGCGCCAG
TCGTGACAGCATGCGCGCGCTGGCAGGGAGAGAGGATGTAGTGAAATGGG
GTGAGCCCAATGACAGCACGGGCGCATGCCAGGCGCAAGCTCACCTTTTC
GTGCTGACAGCCCCGGCGGCCGTTACTGGGCATGACAGTGACGAGACGGA
GTCAGAAGAGGAGGACGACGCTGCCTGGGACGTCCCCGTGGAGATGACCC
CTCTAGGAGAAGCGCCTGGAGGAGAGACTCGCTCCAAGGCGGCAGAAATC
GACAAGATGACGCCGGAGGCCAACGACGCAGCAACAGCACAGCAAGTGAC
GCGGATCGCCTTCAAGGACATGGTTGACTGGCGGCGCCCGCCGGATGACC
TCAGCGCTGAAGACCTACAAGCCCACTGGTGTCCCAGCGAGAGTTGGCCA
TCAGGGCAGGCGCGCATCGGTGGCGAAACTGCGGCGCCGATGGGAACGAC
GGAGCTTCGCGGACTGTATGACCTAAGGCACCCACAGGCGTGGCGACGGG
CACAGGCGCAGGACCCACTCTGCAAACGGCTGCTAACGCGCCTGGAGGTC
GCGCGAGGAATGAACGGACGAGCCAATGAGCGTGGCGGCGGCGCGCTGCA
GCCGGGCGAAGTCGCGCTGCTAAGTCAGTGCTACATGGAACGAGGCGTCT
TGAAGCGCAAGCAGTGGCGCGGTGACAGAAACAGCCCCAACGACCAGTAC
ATCGTACCTAAGGCGCTTCGGGACGTCGTGTTGCTGGCCATGCACGAGGA
CGCGACAGCGGGGCACCAGGGCACGAATCGGACTTTGGCGCGCGTCTTGG
AGAGCTTCTGGTGGCCAACGGTGACTGCAGACACAGCCTGGTGGTGCAGA
GCCTGCCTCAAATGTCAGGCGCGCAAGAGCAGACTCATGCGCAAGTTACC
GCTATGTGTACCAACGCGTCCGTCGGAGCCAGGGGAAATGCTGGGCATCG
ACATCCTCGGTCCGCTGCCGCAGTCAGAGGAGGGGTACCTGTACTTGCTG
GTGATGGTCGACCTTTTCACACGCTGGGTGGAGCTGGCGCCGCTGACGGC
CGTGACGAACACAGCTGTTGGCGTGGCGGAGCAGCTGGTCGATCTCATTC
TTTGCCGAGGCGTGGCTCCGCGCAAGATTGTATCCGATCGTGGCAAGCAC
TTCACCGCAAAGGTTTCCCAGGCGCTGTACGACTACATGCGCACCAAGAA
GGCCACAACAACTGCTTACCGACCACAGTCGGATGGGCAAGCGGAGCGCG
TCATGCCGCAAGTCGCCGCATACCTATCCATGTACGTGTCGGATTATCAG
GCGGACTGGCCCAAGTACCTGCACCTCATGCGTCTGGCGCTCAACACCGC
AGTGTGTCGCGTCACGGGGGTATCGCCTCACGAGCTTGCGACGGGCCGTA
AGCCGCGTCTGCCGTGGGCCGCGATGGCGTTGGAGTCTGCGGACTACGGG
AGGCGCAAGGAGCTG
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