mRNA_P-wetherbeei_contig15126.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15126.1.1 vs. uniprot
Match: A0A849V2K9_9GAMM (Uncharacterized protein n=1 Tax=Methyloglobulus sp. TaxID=2518622 RepID=A0A849V2K9_9GAMM) HSP 1 Score: 120 bits (301), Expect = 2.680e-33 Identity = 58/103 (56.31%), Postives = 75/103 (72.82%), Query Frame = 1
Query: 13 MSEWIAERRLLYTEKGSTTRQELIIRIGRPYIVKPGSVQFEISDGTAACCVEIVGLNDGYLDEVYGADLLQALQLATNVEPTLRRLSTKYDLYFPTGEPYFEE 321
M +IAER LLY++KGS+ R EL +RI P +V G V FE S GTAAC +E GL + ++EV+GAD +QAL LATN++P L+RL +YDLY+ GEPYFEE
Sbjct: 1 MGHFIAERSLLYSQKGSSNRYELNVRINEPRLVNQGEVNFEFSPGTAACKIEFNGLPESLVEEVFGADSIQALSLATNIDPYLKRLQKEYDLYWIDGEPYFEE 103
BLAST of mRNA_P-wetherbeei_contig15126.1.1 vs. uniprot
Match: A0A521X3I6_9GAMM (Uncharacterized protein n=1 Tax=Methylobacter sp. TaxID=2051955 RepID=A0A521X3I6_9GAMM) HSP 1 Score: 110 bits (275), Expect = 2.420e-29 Identity = 54/103 (52.43%), Postives = 72/103 (69.90%), Query Frame = 1
Query: 13 MSEWIAERRLLYTEKGSTTRQELIIRIGRPYIVKPGSVQFEISDGTAACCVEIVGLNDGYLDEVYGADLLQALQLATNVEPTLRRLSTKYDLYFPTGEPYFEE 321
MS+ IA+R+L+++ KG R ++++ P +K G V+F+ + GTA C V+ GL + VYGAD LQALQLA +VEP L+RLS KYDLYFPTGE YFEE
Sbjct: 1 MSQCIAQRKLMFSLKGKNERNPFVVQVLAPRELKEGDVEFQFTGGTAVCIVQFEGLPSVNPEHVYGADSLQALQLAADVEPILKRLSKKYDLYFPTGEGYFEE 103
BLAST of mRNA_P-wetherbeei_contig15126.1.1 vs. uniprot
Match: A0A0R0C3B3_9GAMM (Uncharacterized protein n=2 Tax=Stenotrophomonas terrae TaxID=405446 RepID=A0A0R0C3B3_9GAMM) HSP 1 Score: 105 bits (262), Expect = 2.640e-27 Identity = 53/107 (49.53%), Postives = 71/107 (66.36%), Query Frame = 1
Query: 1 ELLRMSEWIAERRLLYTEKGSTTRQELIIRIGRPYIVKPGSVQFEISDGTAACCVEIVGLNDGYLDEVYGADLLQALQLATNVEPTLRRLSTKYDLYFPTGEPYFEE 321
E + M IA+R L+++ +G+ R + I I P+I++PGSV FE S GTA C ++I GL + + YGAD LQALQLA+N + LR L KYD YFP GEPYFE+
Sbjct: 2 ERVSMPHPIAKRELMFSIRGTEKRTGITIHISAPFILQPGSVNFEFSGGTAGCTLQIDGLPEEFSHTAYGADSLQALQLASNPDRHLRYLRRKYDFYFPDGEPYFED 108
BLAST of mRNA_P-wetherbeei_contig15126.1.1 vs. uniprot
Match: A0A2E2QQA2_9PROT (Uncharacterized protein n=1 Tax=Sneathiella sp. TaxID=1964365 RepID=A0A2E2QQA2_9PROT) HSP 1 Score: 103 bits (258), Expect = 9.550e-27 Identity = 56/105 (53.33%), Postives = 72/105 (68.57%), Query Frame = 1
Query: 13 MSEWIAERRLLYTEKGSTTRQELIIRIGRPYIVKPGSVQFEISDGTAACCVEIVGLNDGYLDEVYGADLLQALQLATN-VEPTLRRLSTKYDLYFPTGEPYFEEE 324
M++ +AER+LLY+ K + R E +RI P + G FE TA C +E G+ DG D+ YGADLLQAL+L+ N VEP LRRLS KYDLYFP+GEPYFE++
Sbjct: 1 MTQAVAERKLLYSLKNAGERHEFSVRIMPPRYLVQGEKFFEPGAETAVCSIEFDGI-DGQNDKTYGADLLQALELSVNSVEPMLRRLSKKYDLYFPSGEPYFEDD 104
BLAST of mRNA_P-wetherbeei_contig15126.1.1 vs. uniprot
Match: UPI001C059A1E (hypothetical protein n=1 Tax=Zooshikella sp. WH53 TaxID=2827238 RepID=UPI001C059A1E) HSP 1 Score: 102 bits (253), Expect = 5.040e-26 Identity = 49/100 (49.00%), Postives = 70/100 (70.00%), Query Frame = 1
Query: 22 WIAERRLLYTEKGSTTRQELIIRIGRPYIVKPGSVQFEISDGTAACCVEIVGLNDGYLDEVYGADLLQALQLATNVEPTLRRLSTKYDLYFPTGEPYFEE 321
++AER+LL++EKG +EL+I+I P++V V+F T+ C VEI GL++ + +YG D LQA+ LA+NVEP L RLS KYD ++ TGEPYF+E
Sbjct: 3 YVAERKLLFSEKGGQCTKELVIKISEPFVVNQNDVKFPTDGVTSGCHVEIEGLDESGFN-LYGMDSLQAINLASNVEPLLERLSNKYDFFWLTGEPYFDE 101
BLAST of mRNA_P-wetherbeei_contig15126.1.1 vs. uniprot
Match: A0A653B9V8_PSEOL (Uncharacterized protein n=2 Tax=Pseudomonas oleovorans TaxID=301 RepID=A0A653B9V8_PSEOL) HSP 1 Score: 101 bits (252), Expect = 1.230e-25 Identity = 54/107 (50.47%), Postives = 68/107 (63.55%), Query Frame = 1
Query: 1 ELLRMSEWIAERRLLYTEKGSTTRQELIIRIGRPYIVKPGSVQFEISDGTAACCVEIVGLNDGYLDEV-YGADLLQALQLATNVEPTLRRLSTKYDLYFPTGEPYFE 318
EL E IA R L Y KG R L I++ +PY+++ G V F S GT+ C ++ GL+ D V YGAD+LQALQ A +VEP L+R+S YDLYF TGEPYFE
Sbjct: 14 ELAMSREVIAIRELEYAAKGKEARCRLTIKVFKPYLLQQGKVPFSFSPGTSGCELKFEGLDTKRFDTVFYGADMLQALQFAADVEPILKRISQDYDLYFETGEPYFE 120
BLAST of mRNA_P-wetherbeei_contig15126.1.1 vs. uniprot
Match: A0A0Q8EUR2_9GAMM (Uncharacterized protein n=1 Tax=Pseudoxanthomonas sp. Root65 TaxID=1736576 RepID=A0A0Q8EUR2_9GAMM) HSP 1 Score: 100 bits (250), Expect = 1.520e-25 Identity = 52/103 (50.49%), Postives = 66/103 (64.08%), Query Frame = 1
Query: 13 MSEWIAERRLLYTEKGSTTRQELIIRIGRPYIVKPGSVQFEISDGTAACCVEIVGLNDGYLDEVYGADLLQALQLATNVEPTLRRLSTKYDLYFPTGEPYFEE 321
M+E IAER L Y +G R++L+IRI P+IV GSV FE+ A C E+ GL + D YGAD +QALQLA N++ L L KYD YF +GEPYFE+
Sbjct: 1 MTERIAERSLQYAVRGGGQRKDLVIRIFSPFIVPVGSVNFEVDGVVAGCRWELEGLPEKVSDTTYGADSVQALQLAANIDGVLAALRDKYDFYFRSGEPYFED 103
BLAST of mRNA_P-wetherbeei_contig15126.1.1 vs. uniprot
Match: UPI00131B3A65 (hypothetical protein n=1 Tax=Dyella sp. S184 TaxID=1641862 RepID=UPI00131B3A65) HSP 1 Score: 100 bits (250), Expect = 1.610e-25 Identity = 52/99 (52.53%), Postives = 66/99 (66.67%), Query Frame = 1
Query: 25 IAERRLLYTEKGSTTRQELIIRIGRPYIVKPGSVQFEISDGTAACCVEIVGLNDGYLDEVYGADLLQALQLATNVEPTLRRLSTKYDLYFPTGEPYFEE 321
IA R LLY+ G TTRQ+L IRI PY++ PGSV F +GTA C +E GL + VYGAD LQALQLA +++P LR LS KYD +F G+ Y ++
Sbjct: 8 IAARNLLYSPIGETTRQKLTIRIVGPYLLTPGSVSFVFDEGTAGCDIEFDGLPQKTIS-VYGADTLQALQLAVDIDPYLRGLSRKYDFFFDNGDSYLDD 105
BLAST of mRNA_P-wetherbeei_contig15126.1.1 vs. uniprot
Match: UPI0013C4A5E3 (hypothetical protein n=1 Tax=Solimonas sp. K1W22B-7 TaxID=2303331 RepID=UPI0013C4A5E3) HSP 1 Score: 100 bits (249), Expect = 2.160e-25 Identity = 51/104 (49.04%), Postives = 69/104 (66.35%), Query Frame = 1
Query: 13 MSEWIAERRLLYTEKGSTTRQELIIRIGRPYIVKPGSVQFEISDGTAACCVEIVGLNDGYLDEVYGADLLQALQLATNVEPTLRRLSTKYDLYFPTGEPYFEEE 324
M ++A+R LLY+ KG R + + I PY++ GSV F GTA C +E GL + + EVYGAD LQA++LA+NVEP L L KYD+Y+ +GEPYFE+E
Sbjct: 1 MKSYLAKRDLLYSLKGQKIRHQFSVGIREPYLLTEGSVNFIFDPGTAGCTIEFEGLPERPI-EVYGADTLQAVELASNVEPYLSGLRKKYDIYWLSGEPYFEDE 103
BLAST of mRNA_P-wetherbeei_contig15126.1.1 vs. uniprot
Match: A0A1Y5GUQ4_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium 45_16_T64 TaxID=1856297 RepID=A0A1Y5GUQ4_9GAMM) HSP 1 Score: 96.3 bits (238), Expect = 1.100e-23 Identity = 49/102 (48.04%), Postives = 72/102 (70.59%), Query Frame = 1
Query: 19 EWIAERRLLYTEKGSTTRQELIIRIGRPYIVKPGSVQFEISDGTAACCVEIVGLNDGYLDEVYGADLLQALQLATNVEPTLRRLSTKYDLYFPTGEPYFEEE 324
++IAER LL++EK + R+E+ IRIG PY V+ V+F + T+ C VEI G+++ D +YG D LQA+ LA+N+EP + RLS YD ++ +GEPYF+EE
Sbjct: 2 QYIAERILLFSEKKCSIRKEVRIRIGVPYPVQQDKVEFSVDRYTSGCRVEIEGIDECGFD-LYGMDSLQAVNLASNIEPLIERLSGDYDFFWLSGEPYFDEE 102 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15126.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15126.1.1 >prot_P-wetherbeei_contig15126.1.1 ID=prot_P-wetherbeei_contig15126.1.1|Name=mRNA_P-wetherbeei_contig15126.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=105bp MSEWIAERRLLYTEKGSTTRQELIIRIGRPYIVKPGSVQFEISDGTAACCback to top mRNA from alignment at P-wetherbeei_contig15126:73..399+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15126.1.1 ID=mRNA_P-wetherbeei_contig15126.1.1|Name=mRNA_P-wetherbeei_contig15126.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=327bp|location=Sequence derived from alignment at P-wetherbeei_contig15126:73..399+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15126:73..399+ >mRNA_P-wetherbeei_contig15126.1.1 ID=mRNA_P-wetherbeei_contig15126.1.1|Name=mRNA_P-wetherbeei_contig15126.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=315bp|location=Sequence derived from alignment at P-wetherbeei_contig15126:73..399+ (Phaeothamnion wetherbeei SAG_119_79)back to top |