mRNA_P-wetherbeei_contig15125.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15125.2.2 vs. uniprot
Match: Q8QNM4_ESV1K (EsV-1-40 n=2 Tax=root TaxID=1 RepID=Q8QNM4_ESV1K) HSP 1 Score: 244 bits (622), Expect = 3.490e-72 Identity = 148/454 (32.60%), Postives = 236/454 (51.98%), Query Frame = 1
Query: 1 SAFFETLFSSDMNKGIYIDKDSGVTVIPVSGYLESETILRMVRIFCHTGTLEVFDGDSVEILLECYFASDFYGLEGALKLLHSMLVNQISPANVLRVYEILLRKGSCEGKV-------IEKEVEDYIATYAFVILKHKSFLQFPSDLLGNMCHLLRRDDLNILEKDLLWLVYKCCSHRCDGMMAHASPSNVSEHPSPMDLLLHHWTDHGAQSLWGSIRFAALTHTEFADFIFKNPTALEDADTVDIIKFLH-----IIKETPEENVE----------------FRAISFYPRNLQLYGMRSPQSDVVYWDSQKMTAFFALQYDTKSAVSLNPIRFCKSYFHLELSHSENSIHMYGRAHPDQNAVSSVNTRADVKVTSSIVNFKHDRWKKKASVVPLSHSKVSEFSLNNILTWSTVEKVKKNEEADSSGYLFDIGYYPHYRA-GTWMMVLVSIES 1275
S +F+ LFSS M KG ++ GVT VS + I M+R+FCHTG ++V G+ + +E Y A +Y L+G + ++ ++++ I+P N ++ E + C G + +++DYI+ YAFV+ KHKSF +D + + + RDDLNI E DLL VYK C + + A P + S L+ + G+ SLW IR ++++ EF FI +N + + II FL+ +TP + F+ ISFYPRNL+ +G+ SPQ+D+ YWD K+ F A + +K A++L P+ F + H + H++ S+++ G H N + ++ VT+S+VNF+HDRW+KK + LS + F + IL+ +T+ D+ GYLFDI YP Y GTW+++ + IE
Sbjct: 54 SDYFKCLFSSSMRKGT--EEFEGVTAYSVSHPMSKRHIFDMMRVFCHTGMVQVDKGEPILKTMERYSAFHYYSLQGGMNVIRQLVMDVINPTNAIQALEYAMSSAVCSGDGDGDSNAGLLSDIQDYISIYAFVVFKHKSFYALRADSIPGVSQICARDDLNIKEIDLLQCVYKLCEKK---VSADNKPGGLG---SAWALMTDDAAERGS-SLWSKIRLSSISMREFVKFIKENKQCFSSDNALKIITFLYSCADAAAADTPPSSASANDEVVGVHLSKKRKTFQPISFYPRNLEFHGLASPQTDISYWDDSKIKLFVAFDFSSKEAMTLPPVHFHSVFIHCTVYHADRSLNVSGNIHGKTN---KSDPSVNITVTASVVNFRHDRWRKKNVLASLSSG--TAFKIPTILSSNTIAN------NDTHGYLFDIERYPEYSPKGTWILMSLCIEK 487
BLAST of mRNA_P-wetherbeei_contig15125.2.2 vs. uniprot
Match: B5LWK4_9PHYC (Putative transcription regulator n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWK4_9PHYC) HSP 1 Score: 195 bits (496), Expect = 4.800e-54 Identity = 126/428 (29.44%), Postives = 220/428 (51.40%), Query Frame = 1
Query: 1 SAFFETLFSSDMNKGIYIDKDSGVTVIPVSGYLESETILRMVRIFCHTGTLEVFDGDSVEILLECYFASDFYGLEGALKLLHSMLVNQISPANVLRVYEILLRKGSCEGKVIEKEVEDYIATYAFVILKHKSFLQFPSDLLGNMCHLLRRDDLNILEKDLLWLVYKCCSHRCDGMMAHASPSNVSEHPSPMDLLLHHWTDHGAQSLWGSIRFAALTHTEFADFIFKNPTALEDADTVDIIKFLHIIKETPEENVEFRAISFYPRNLQLYGMRSPQSDVVYWDSQKMTAFFALQYDTKSAVSLNPIRFCKSYFHLELSHSENSIHMYGRA-HPDQNAVSSVNTRADVKVTSSIVNFKHDRWKKKASVVPLSHSKVSEFSLNNILTWSTVEKVKKNEEADSSGYLFDIGYYPHYR-AGTWMMVLVSIESM 1278
S+F TLF + + KG + +P+ E I M+R+FCHTG + D++ +E Y A FYG+E L ++++ + P+N + +E + + + + + +++ YI YAF++ + KSFL + L + HL D LN+ E DLL + + C + D +E SP +L H +SL+ ++R ++L+ EF K+P A+ + V +++ +H + + ++ +F+ +S YPRNL + + SPQ +V Y K+ A + Q+ K VSL + F + + + + + + G+A P Q + RAD+++T+S+VNF+HDRWKK S LS S F + NIL+ + +E SSGYLFD+ YP + G+ +M+ ++ ES+
Sbjct: 56 SSFMRTLFETTVGKG-----EKSRDEVPMYRLSEKSHIFAMIRVFCHTGLVRFGKSDTILRTIERYAAFQFYGIEIGSATLKRLVLDSLGPSNSMVAFEYAVHR---QDRGLLQDIVAYIRNYAFLVFRQKSFLGIRRESLAELVHLCDSDSLNVPEIDLLSHLIRLCEKKLDE-------KEFTEFDSPFAILTHREWGTSGKSLFDALRLSSLSMEEFMSLALKHPGAMNNDQIVQVMRAIHRPEGSSKKRKKFQIVSAYPRNLTFHPVESPQMEVSYCQRDKVLAHYVFQFLPKKDVSLPTLNFGSYQIRITVVYRDKVLGISGQAISPKQES------RADLRITASMVNFRHDRWKK--STTALSGSV---FQIPNILSCNAIE--------GSSGYLFDVAEYPDFSDGGSCLMLSLACESL 449
BLAST of mRNA_P-wetherbeei_contig15125.2.2 vs. uniprot
Match: A0A6H5KJD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJD3_9PHAE) HSP 1 Score: 109 bits (273), Expect = 3.930e-22 Identity = 60/176 (34.09%), Postives = 96/176 (54.55%), Query Frame = 1
Query: 1 SAFFETLFSSDMNKGIYIDKDSGVTVIPVSGYLESETILRMVRIFCHTGTLEVFDGDSVEILLECYFASDFYGLEGALKLLHSMLVNQISPANVLRVYEILLRKGSCEG-----KVIEKEVEDYIATYAFVILKHKSFLQFPSDLLGNMCHLLRRDDLNILEKDLLWLVYKCCSHR 513
S +F+ LF +DM KG +K GV VS + I M+R+FC+TG ++V G+ + +E Y A +Y L G + ++ ++++ I+P+N ++ E + C G + + ++ DYIA YA V+ KHKSF + + + + RDDLNI E DLL V+K C R
Sbjct: 449 SDYFKCLFLNDMRKGT--EKFEGVKANKVSDPISKRHIFDMMRVFCYTGIVQVDKGEPILKTMERYSAFHYYSLRGGMDVIRQLVMDVINPSNAIQALEYAMNSVVCSGEDGSDRGLLSDISDYIAIYALVVFKHKSFYALGFESIPGISQICARDDLNIREIDLLQCVFKLCEKR 622
BLAST of mRNA_P-wetherbeei_contig15125.2.2 vs. uniprot
Match: A0A836CM23_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM23_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 6.210e-14 Identity = 103/439 (23.46%), Postives = 182/439 (41.46%), Query Frame = 1
Query: 67 GVTVIPVSGYLESETILRMVRIFCHTGTLEVFDGDSVEILLECYFASDFYGLEGALKLLHSMLVNQISPANVLRVYEIL-LRKGSCEGKVIEKEVEDYIATYAFVILKHKSFLQFPSDLLGNMCHLLRRDDLNILEKDLLWLVYKCCSH-RCDGMMAHASPSNVSEHPSPMDLLLHHWTDHGAQSLWGSIRFAALTHTEFADFIFKNPTALEDA---DTVDIIK----------FLHIIKETPEENVEFRAISFYPRNL--QLYGMRS------------PQSDV-VYWDSQKMTAFFA-LQYDTKSAVSLNPIRFCKSYFHLELSHSENSIHMYGRAHPDQNAVSS-----VNTRADVKVTSSIVNFKHDRWKKKASVVPLSHSKVSEFSLNNILTWSTVEKVKKNEEADSSGYLFDIGYYPHYRAGTWMMVLVSIES 1275
G +V+ V G+L +LRMVR+F HTG +S L Y DF+ + LLH ++V ++ + L+++++L +R+ S ++ V Y+ + F S + L ++C +L D++N E LL +Y C + G +S S + P+ + S W +R L ++ F P A D+ + ++I+ L + + + E + AIS YPRN+ ++G+ S P S + + W + ++ +A L Y V L P +S L + +H+ G D NA +A +T V+F+H RW K +++ S F + ++T S +E + GY FD YP + G ++M+ + I
Sbjct: 70 GRSVVRVEGFLRQADLLRMVRVFGHTGITVYGRTESPMALYRRYECCDFFIFNCSRDLLHRVIVERLDVHSALQLFDVLSVREFSDNSLTVD--VTAYVTNH-FGEASRSSLSALGTHSLPHLCAVLSGDEVNACESKLLGSLYSVCDRLKTKG----SSTSQLFMQPTTCGV-----------SPWQCVRVLGLKVSDLLAFRASWPLAFSDSFCWNLAEVIETRNAEDRHFQLLGLSEASMREPRKLTAISCYPRNIPMSMHGLISDATAATNRSVIGPASIIHIMWQERHISVAYACLAYTRGRRVQLPPFACNRSVIQLTAIFEGSHMHIEGGV--DINASQRRERHMSEPQAGRLLTVYAVHFRHGRWNKGGAIIKGGRS----FHIAKLITLSALE---------TEGYKFDPTKYPVFTPGGYIMIKMVITD 475 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15125.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15125.2.2 >prot_P-wetherbeei_contig15125.2.2 ID=prot_P-wetherbeei_contig15125.2.2|Name=mRNA_P-wetherbeei_contig15125.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=427bp SAFFETLFSSDMNKGIYIDKDSGVTVIPVSGYLESETILRMVRIFCHTGTback to top mRNA from alignment at P-wetherbeei_contig15125:37..1458+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15125.2.2 ID=mRNA_P-wetherbeei_contig15125.2.2|Name=mRNA_P-wetherbeei_contig15125.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1422bp|location=Sequence derived from alignment at P-wetherbeei_contig15125:37..1458+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15125:37..1458+ >mRNA_P-wetherbeei_contig15125.2.2 ID=mRNA_P-wetherbeei_contig15125.2.2|Name=mRNA_P-wetherbeei_contig15125.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1281bp|location=Sequence derived from alignment at P-wetherbeei_contig15125:37..1458+ (Phaeothamnion wetherbeei SAG_119_79)back to top |