mRNA_P-wetherbeei_contig15115.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15115.1.1 vs. uniprot
Match: A0A7X8XKU4_9BURK (Histidine kinase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XKU4_9BURK) HSP 1 Score: 278 bits (711), Expect = 1.090e-83 Identity = 157/307 (51.14%), Postives = 208/307 (67.75%), Query Frame = 1
Query: 1 LNKKLAATVIPLVLFFMAFNFFVIHRHEEQILRSETEKRAVSLAAGLSILAAEAQRTFSEYQLQQNVLEFSNLRDVVSVAIIDNQGRVLAHNVAQQRGKMLDAEAAGFAQKTEVETHRYATMGKQTVLEVYDPIYLGDRRTGTVLIVLSQVGLENALDRSMRYLMGLTLILLSGATIFVGFLARWFTAPLLRLAYVARELADGRLGARARATTHDEVGVLGSALNQMAQRLESMIAQEKDARNRLQKRVANLLEYTDRVISGDLNGQAEAGEDDEMGRLTLAVNEMVRHLRIILEDERSVRENLERS 921
L +L +V+PL+L FMAFNF VI HE + L ETEKRA SLAAGLSIL+AEA TFS Y L QN F +L DV ++ G + AH+ + + G+ A T +E Y + +L+V PI +GDRR GTV I L+ G + L++S RYL+GLTL+LLSGA +F F+ARWFT PLL LA V+R+LA G L ARA DE+G LG LN+MA+RL+S + +E+ AR +LQ+RV +LL++ D V+SG+L+GQA + DEMG+LT+AVNEMVRHLR +LE+ER+ R NLE+S
Sbjct: 9 LRTRLLLSVVPLLLLFMAFNFVVILHHETRNLTRETEKRASSLAAGLSILSAEAMLTFSNYLLDQNTARFGSLPDVAYCMVLGPDGAIRAHSQSSEVGRRYQDTLTRSAVSTAIERIEYQVWEGRKILDVATPIRVGDRRLGTVRIGLTLDGRDQVLEQSRRYLVGLTLVLLSGALLFTAFIARWFTDPLLNLAAVSRDLAQGNLDARADTGRRDEIGFLGEGLNRMARRLQSQVERERLAREKLQERVRDLLDFADGVMSGNLHGQATVEDLDEMGQLTMAVNEMVRHLRSLLEEERASRANLEQS 315
BLAST of mRNA_P-wetherbeei_contig15115.1.1 vs. uniprot
Match: A0A355TPE0_9BACT (Uncharacterized protein n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TPE0_9BACT) HSP 1 Score: 131 bits (329), Expect = 9.060e-31 Identity = 89/311 (28.62%), Postives = 165/311 (53.05%), Query Frame = 1
Query: 1 LNKKLAATVIPLVLFFMAFNFFVIHRHEEQILRSETEKRAVSLAAGLSILAAEAQRTFSEY----QLQQNVLEFSNLRDVVSVAIIDNQGRVLAHNVAQQRGKMLDAEAAGFAQKTEVETHRYATMGKQTVLEVYDPIYLGDRRTGTVLIVLSQVGLENALDRSMRYLMGLTLILLSGATIFVGFLARWFTAPLLRLAYVARELADGRLGARARATTHDEVGVLGSALNQMAQRLESMIAQEKDARNRLQKRVANLLEYTDRVISGDLNGQAEAGEDDEMGRLTLAVNEMVRHLRIILEDERSVRENLERS 921
L K+ ++PL +FF F F VI E+ L R+ SL L+ ++A++ Y +LQ++V + + V ++ ++++ G+V A +++ + G + + E A V T G+ + P+ D G V + L+ L A R L+GL IL+SGA F F++ ++ PLL LA VA ++A G+L RA DE+G+ S LN++++ ++ +IA + ++R+ L + D V++GD QA+ + DE+G+L++++NE+VRH+R + E+++++ + S
Sbjct: 9 LKIKMLLALLPLTVFFAFFCFAVIKGGEQLSLTHSLAMRSESLGECLAAMSADSLDDPGNYAKSAKLQRSVSVLAEQKGVSALEVLNSAGKVKASSLSAEIGSIKNDEQTRKALGLSVIQSGLETSGETDCMVSTVPVRSSDSSLGIVRVYLTTDELTAAFSGLKRQLLGLVFILISGALGFTAFVSYFYGNPLLNLAEVADQMAQGKLETRADQNRADEIGLAASRLNRLSEYIQKLIASSQAEETEKRERIHALRNFVDGVLAGDTESQAKVEDIDELGQLSMSINELVRHMRTLSAAEQALQDRVNES 319
BLAST of mRNA_P-wetherbeei_contig15115.1.1 vs. uniprot
Match: A0A7G1H1T4_9BACT (Histidine kinase n=2 Tax=root TaxID=1 RepID=A0A7G1H1T4_9BACT) HSP 1 Score: 75.9 bits (185), Expect = 1.070e-11 Identity = 66/253 (26.09%), Postives = 117/253 (46.25%), Query Frame = 1
Query: 4 NKKLAATVIPLVLFFMAFNFFVIHRHEEQILRSETEKRAVSLAAGLSI-----LAAEAQRTFSEYQLQQN-VLEFSNLRDV--VSVAIIDNQGRVLAHNVAQQRGKML-DAEAAGFAQKTEVETHRYATMGKQTVLEVYDPIYLGDRRTGTVLIVLSQVGLENALDRSMRYLMGLTLILLSGATIFVGFLARWFTAPLLRLAYVARELADGRLGARARATTHDEVGVLGSALNQMAQRLESMIAQEKDARNRL 735
+K + T I ++ + + R ++ IL +E +++ L L+I L E E L N ++E N RDV + +AI+D +GRV++HN + GKM DA Q E + +++ G L+ P+ +G +R GT+ +S +E + +++ ++ LTL L+ + FL+ F +P+ LA + L + HDE+ VLG N M R++ + K +L
Sbjct: 15 SKFILITTIAIIFLMGIIGYMAVERGKK-ILYAEVQRQGRLLGETLAIPIINDLIYERLGLVEEGGLLDNYIMEIFNRRDVDLIYIAILDEEGRVISHNNIAEYGKMYSDAATVKALQSDEAVIYSFSSEG-HNALDFGIPLSIGKKRWGTLKFAISLQKVEKEITATIKKIVILTLFLIIAGFGIILFLSNHFISPITHLASTMEKTRGDYLDVKVDVKGHDELAVLGERFNDMIARIKQANEELKKTHEKL 265
BLAST of mRNA_P-wetherbeei_contig15115.1.1 vs. uniprot
Match: A0A3C0TLW0_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Nitrospiraceae bacterium TaxID=2026770 RepID=A0A3C0TLW0_9BACT) HSP 1 Score: 74.3 bits (181), Expect = 2.270e-11 Identity = 80/303 (26.40%), Postives = 136/303 (44.88%), Query Frame = 1
Query: 1 LNKKLAATVIPLVLFFMAFNFFVIHRHEEQILRSETEKRAVSLAAGLSI-----LAAEAQRTFSEYQLQQN-VLEFSNLRDV--VSVAIIDNQGRVLAHNVAQQRGKMLDAEAAGFA---QKTEVETHRYATMGKQTVLEVYDPIYLGDRRTGTVLIVLSQVGLENALDRSMRYLMGLTLILLSGATIFVGFLARWFTAPLLRLAYVARELADGRLGARARATTHDEVGVLGSALNQMAQRLESMIAQEKDARNRLQKRVANLLEYTDRVISGD-LNGQAEAGEDDEMGRLTLAVNEMVRHLR 873
L +K VL + F+I R E +L + E++ LA L+I L E E L N V E N +D+ + +A++D GRV+AHN + GK+ + A T V+ T+G+Q L+ P+ +G +R GT+ +S L+ + ++ ++ +TLILL G + L R +P+ LA + L + T DE+ +LG + N+M +R+ + K N L + V+ + GD L+ + + DE+ L + N M+ +R
Sbjct: 11 LQRKFILVTSIAVLVLLVIIGFIITRRESSLLYRDIERQGRLLAETLAIPVMNDLLYERLGFVEEGGLIDNYVTEIFNKKDIDLIYLAVLDETGRVIAHNDFNEYGKLYEDPITAKALSSDATVVQKFYDDTIGQQA-LDFAAPLSIGKKRWGTLKFAVSLERLDEEIRATILSVIVVTLILLIGFFGVIVLLIRRLISPITDLARTMEKAGGDTLDVEVKITGGDEIALLGKSFNKMIERIRKSSLRLKQTHNELLQFVSTI-----EKTGGDMLDVKVDIEGCDEITLLCDSFNRMIDRIR 307
BLAST of mRNA_P-wetherbeei_contig15115.1.1 vs. uniprot
Match: A0A522V6Z1_9BACT (Histidine kinase n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A522V6Z1_9BACT) HSP 1 Score: 74.7 bits (182), Expect = 2.590e-11 Identity = 68/243 (27.98%), Postives = 119/243 (48.97%), Query Frame = 1
Query: 4 NKKLAATVIPLVLFFMAFNFFVIHRHEEQILRSETEKRAVSLAAGLSI-----LAAEAQRTFSEYQLQQN-VLEFSNLRDV--VSVAIIDNQGRVLAHNVAQQRGKM----LDAEAAGFAQKTEVETHRYATMGKQTVLEVYDPIYLGDRRTGTVLIVLSQVGLENALDRSMRYLMGLTLILLSGATIFVGFLARWFTAPLLRLAYVARELADGRLGARARATTHDEVGVLGSALNQMAQRLE 696
K + T I +++F + + R E+ ILR+E E+ L L+I L E E L N +LE N RDV + +AI+D +GRV++HN + GK+ L + G + KT ++ + L+ P+ +G +R GT+ +S +E + +++ ++ LTL L+S + + FL+R F +P+ +LA + L A+ DE+ +LG N M +R++
Sbjct: 8 TKFVLITTIAIIVFMSILGYASVQR-EKAILRAEVEREGQLLGETLAIPIINDLIYERLGLVEEGGLLDNYILEIFNRRDVDLLYIAILDEEGRVISHNDITEYGKVYADHLTKKYIG-SDKTLIQQFLHKD---HEALDFGVPLSIGKKRWGTLKFGISLEKVEREIIATVKKIILLTLFLISSGFVMILFLSRRFISPITQLASTMEKTGADYLDAKVDIKGDDELAMLGERFNNMIERIK 245
BLAST of mRNA_P-wetherbeei_contig15115.1.1 vs. uniprot
Match: A0A533ZED5_9BACT (Histidine kinase n=3 Tax=unclassified Nitrospirae TaxID=1298915 RepID=A0A533ZED5_9BACT) HSP 1 Score: 74.7 bits (182), Expect = 2.990e-11 Identity = 78/236 (33.05%), Postives = 114/236 (48.31%), Query Frame = 1
Query: 100 SETEKRAVSLAA-GLSILAAEAQ--RTFSEYQLQQNVLEFSNLRDVVSVAIIDNQGRVLAHNVAQQ-----------RGKMLDAEAAGFAQKTEVETHRYATMGKQTVLEVYDPIYLGDRRTGTVLIVLSQVGLENALDRSMRYLMGLTLILLSGATIFVGF-LARWFTAPLLRLAYVARELADGRLGARARATTHDEVGVLGSALNQMAQRLESMIAQEKDARNRLQKRVANLLE 762
+E K SLA L L A+A + S Q+Q V E S + V +I G VLA + R +++ A +AG+ + AT+G Q + + P+ G++ G V + + LE A R ++ +G+ LAR T PL +A VAR+LA G LG R R T+HDEVGVLGS LNQMA +LES I + + R +L +A+++E
Sbjct: 41 AEALKARTSLAVLALQPLLAQAGAGQPTSPQQIQSMVRELSR-HALARVTVIGPDGTVLADSDTPDDAVSRLENHGTRPEVIQALSAGYG----TDIRLSATVG-QRMYYLALPMTAGNQIRGVVRLAIPLTILE-ARTRDLQRAVGIAFXXXXXXXXXXXXXLARGVTRPLSAMAAVARQLAGGSLGQRIRTTSHDEVGVLGSTLNQMADQLESKIREVSEDRTQLLAMLASMIE 269
BLAST of mRNA_P-wetherbeei_contig15115.1.1 vs. uniprot
Match: A0A419GJV0_9BACT (Histidine kinase n=1 Tax=Nitrospiraceae bacterium TaxID=2026770 RepID=A0A419GJV0_9BACT) HSP 1 Score: 73.2 bits (178), Expect = 8.720e-11 Identity = 64/252 (25.40%), Postives = 116/252 (46.03%), Query Frame = 1
Query: 4 NKKLAATVIPLVLFFMAFNFFVIHRHEEQILRSETEKRAVSLAAGLSI-----LAAEAQRTFSEYQLQQN-VLEFSNLRDV--VSVAIIDNQGRVLAHNVAQQRGKMLDAEAAGFAQKTEVETHRYATMGKQTVLEVYDPIYLGDRRTGTVLIVLSQVGLENALDRSMRYLMGLTLILLSGATIFVGFLARWFTAPLLRLAYVARELADGRLGARARATTHDEVGVLGSALNQMAQRLESMIAQEKDARNRL 735
+K + T +V+ + + R E IL +E E+ L L+I L E E L N +LE N +DV + +AIID GRV++HN GK+ A K + ++ + L+V P+ +G +R GT+++ +S +E + +++ ++ LT+ L+ + L+R F +P+ LA + + G L + +DE+ +LG N M +R++ + K +L
Sbjct: 34 HKFILITTAAIVILMFIIGYLAVER-ERSILYTEVEREGRLLGETLAIPIINDLIYEKLGLVEEGGLLDNYILEIFNRQDVNLLYIAIIDEDGRVMSHNDITNYGKVYTDPLTINALKADNTKVQHFSHDGHKALDVSVPLSIGKKRWGTLVVGISLKKVEREIIATVKKIVFLTIFFLAAGFGIILLLSRRFISPITLLAAMMEKTGGGYLDVKVDVKGYDELALLGERFNSMIERIKQANEELKKTHEKL 284
BLAST of mRNA_P-wetherbeei_contig15115.1.1 vs. uniprot
Match: A0A1F9CCV2_9DELT (Histidine kinase n=1 Tax=Deltaproteobacteria bacterium RBG_16_64_85 TaxID=1797846 RepID=A0A1F9CCV2_9DELT) HSP 1 Score: 67.8 bits (164), Expect = 5.240e-9 Identity = 62/233 (26.61%), Postives = 107/233 (45.92%), Query Frame = 1
Query: 22 TVIPLVLFFMAFNFFVIHRHEEQILRSETEKRAVSLAAGLSI-----LAAEAQRTFSEYQLQQNVL-EFSNLRD--VVSVAIIDNQGRVLAHNVAQQRGKML-DAEAAGFAQKTEVETHRYATMGKQTVLEVYDPIYLGDRRTGTVLIVLSQVGLENALDRSMRYLMGLTLILLSGATIFVGFLARWFTAPLLRLAYVARELADGRLGARARATTHDEVGVLGSALNQMAQRL 693
T +++ + + R E+ IL +E EK+ L L+I L E E L N L E N +D ++ VAI+D +GRV++HN + GK D + R+++ G L+ P+ +G +R GT+ +S +E + +++ ++ LT++LL + L+R F +P+ +LA L + HDE+ VLG N M +R+
Sbjct: 21 TTCAIIVMMSVLGYLAVER-EKSILYAEVEKQGRLLGETLAIPIINDLIYEKLGLVEEGGLLDNYLMEIFNRQDADLLYVAILDEEGRVISHNDITEYGKRYADRLTKKILAEERTTVQRFSSAG-HNALDFGVPLSIGKKRWGTLKFGISLEKVEREILVTVKRIVVLTIVLLFAGFAIIVLLSRRFISPITQLANAMERAHGDTLDLKVDVKGHDELAVLGERFNSMIERI 251
BLAST of mRNA_P-wetherbeei_contig15115.1.1 vs. uniprot
Match: A0A1X7HU15_9BACL (Histidine kinase n=3 Tax=Paenibacillus TaxID=44249 RepID=A0A1X7HU15_9BACL) HSP 1 Score: 66.6 bits (161), Expect = 1.260e-8 Identity = 62/241 (25.73%), Postives = 113/241 (46.89%), Query Frame = 1
Query: 1 LNKKLAATVIPLVLFFMAFNFFVIHRHEEQILRSETEKRAVSLAAGLSILAAEAQRTFSEYQLQQNVLEFSNLRDVVSVAIIDNQGRVLAHNVAQQRGKMLDAEAAGFAQKTEVETH--------RYATM--GKQTVLEVYDPIYLGDRRTGTVLIVLSQVGLENALDRSMRYLMGLTLILLSGATIFVGFLARWFTAPLLRLAYVARELADGRLGARARATTHDEVGVLGSALNQMAQRL 693
+N+K+ +I ++F + ++I I+ E +KR +S+A ++ L+++ +Y + Q + + D V +I N +H+V G + G+ K ++ H + AT+ + T+ +V PI GD G V + ++ + ++ M+ L +TL + I ++ R+ T P+ L VA ++ G L RA T DEVG LGSA N+MA +L
Sbjct: 9 INQKIFGVIIASLIFLASALGWIIWDSLHTIMTDELKKRGISVAHSIASLSSDYILMDEQYSIHQLISQAQLTNDDVRYILIINS----SHDVV---GDTFE----GYLPKGIIQAHTPESGHTLQVATLMSDEGTIYDVLMPIEEGD--VGFVRVGMTDTKAQTYINIKMKALFYVTLFICVVTAIITYYMTRFITRPINNLVAVATGISAGNLTMRASITNSDEVGRLGSAFNEMADKL 236
BLAST of mRNA_P-wetherbeei_contig15115.1.1 vs. uniprot
Match: A0A679I5U0_9BACT (Histidine kinase n=1 Tax=Nitrospira sp. KM1 TaxID=1936990 RepID=A0A679I5U0_9BACT) HSP 1 Score: 63.9 bits (154), Expect = 1.100e-7 Identity = 72/274 (26.28%), Postives = 118/274 (43.07%), Query Frame = 1
Query: 7 KKLAATVIPLVLFFMAFNFFVIHRHEEQILRSETEKRAVSLAAGLSILAAEAQRTFSEYQLQ------QNVLEFSNLRDVVSVAIIDNQGRVLAHNVAQQRG-----------KMLDAEAAGF-----AQKTEVETHRYATMGKQTVLEVYDPIYLGDRRTGTVLIVLSQVGLENALDRSMRYLMGLTLILLSGATIFVGFLARWFTAPLLRLAYVARELADGRLGARARATTHDEVGVLGSALNQMAQRLESMIAQEKDARNRLQKRVANLLE 762
K AT++ L+ F+ E+Q E + ++L S++A + + F + Q Q+VL R + V +I + G V+A + Q R ++ A A G A KT + Y P+YL R G + L Q + L R++ G +L+ G +++ LA T PLL +A A+ LA G + R ++ DEVG+L LNQMA +L + IA+ D R +L + +++E
Sbjct: 8 KVALATLLALICGFVIAGILAARSLEQQ----ELTRSHLTLEVRTSLIAYQLRGLFPDLQAPAVRFQLQSVLRELGTRSLARVTLIASDGTVVADSAVQDRDLAAVENHRTRPEIEQAVATGTGTDLRASKTTGDRTLYRATRLHNANPSVQPLYL---RLGLPMTTLDQE--QATLKRNLALAFGSAFLLVVGLSVW---LAGSLTRPLLDMASAAKRLAGGDHTVKIRVSSRDEVGLLADTLNQMADQLNTSIAEISDDRAQLLAMLTSMVE 269 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15115.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15115.1.1 >prot_P-wetherbeei_contig15115.1.1 ID=prot_P-wetherbeei_contig15115.1.1|Name=mRNA_P-wetherbeei_contig15115.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=307bp LNKKLAATVIPLVLFFMAFNFFVIHRHEEQILRSETEKRAVSLAAGLSILback to top mRNA from alignment at P-wetherbeei_contig15115:314..1234- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15115.1.1 ID=mRNA_P-wetherbeei_contig15115.1.1|Name=mRNA_P-wetherbeei_contig15115.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=921bp|location=Sequence derived from alignment at P-wetherbeei_contig15115:314..1234- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15115:314..1234- >mRNA_P-wetherbeei_contig15115.1.1 ID=mRNA_P-wetherbeei_contig15115.1.1|Name=mRNA_P-wetherbeei_contig15115.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=921bp|location=Sequence derived from alignment at P-wetherbeei_contig15115:314..1234- (Phaeothamnion wetherbeei SAG_119_79)back to top |