mRNA_P-wetherbeei_contig15098.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15098.2.1 vs. uniprot
Match: A0A2E9ZMD0_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E9ZMD0_9GAMM) HSP 1 Score: 60.5 bits (145), Expect = 4.320e-8 Identity = 56/180 (31.11%), Postives = 88/180 (48.89%), Query Frame = 1
Query: 1 LALVAAFVVPILIAWWFAIMHPEAVPQGQLNHGELLHPPIDLKP----AAAGAALDALKLAPAEWGLMYYAAGPCAADCARVVELLLTVRSLIGAHGARVHVAALVDAAPSPAIAQALTIVDADARALLAREAAARTGTHR-EHGIVLLDSQRLAMMIYAVDASPVGIKEDLKRLLRGSA 525
LAL+A FV+P+L+AW A + PQ LN+G LL PP+ L A G AL +A +W ++ C C +++E ++ +G RV +A L A +PA + ADA L + +G + + +++D Q +++Y G+ EDLKRLLR +A
Sbjct: 17 LALMAVFVLPLLLAWGLARGPFDWRPQSNLNYGVLLQPPLQLNAFGVMPATGTALTMNAIA-RDWFVVVLYNEVCTLGCQQLMEAAERIQIAVGRDAGRVSLALLGSEAITPAPPGNNLWLAADAA--LGQALRQASGEPQFDAKFLIVDYQGYVVLMYPPSEEGPGVLEDLKRLLRTAA 193
BLAST of mRNA_P-wetherbeei_contig15098.2.1 vs. uniprot
Match: A0A1C9W5J7_9GAMM (Uncharacterized protein n=1 Tax=Microbulbifer aggregans TaxID=1769779 RepID=A0A1C9W5J7_9GAMM) HSP 1 Score: 54.7 bits (130), Expect = 7.130e-6 Identity = 53/190 (27.89%), Postives = 88/190 (46.32%), Query Frame = 1
Query: 1 LALVAAFVVPILIAWWFAIMHPE-AVPQGQLNHGELLHPPIDLKPAAAGAALD-------ALKLAPAEWGLMYYAAGPCAADCARVVELLLTVRSLIGAHGARVHVAALVDAAPSPAIAQALTIVDADARALLAREAAARTGTHREHGIV--------LLDSQRLAMMIYAVDASPVGIKEDLKRLLRGS 522
L+L+AA +PI+ A + + H +P G +N GELL PP+D++ A +A + + + AP +W + G C + C ++ V + RV LV P PA +A + + +A+A RE G+V L+D + AMM Y + + + +D+KRLL+ S
Sbjct: 26 LSLIAAVALPIVAA--YVVYHTGLGMPDGTINQGELLQPPVDIEGLALRSASEESASQAVSFESAPHKWRYLILPDGACESACDNLLYTSRQVHIRLAEKADRVE-RLLVTPEPLPAERRAAIAAEHPRLRFVTADASALQTLRRESGLVMAEGPQAVLVDQKGFAMMRYGNEHTGNQLLKDIKRLLKYS 212
BLAST of mRNA_P-wetherbeei_contig15098.2.1 vs. uniprot
Match: A0A7C7YYX1_9GAMM (Uncharacterized protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A7C7YYX1_9GAMM) HSP 1 Score: 53.5 bits (127), Expect = 1.550e-5 Identity = 52/187 (27.81%), Postives = 82/187 (43.85%), Query Frame = 1
Query: 1 LALVAAFVVPILIAWWFAIMHPEAVPQGQLNHGELLHPP---IDLKPAAAGAALDALKLAPAEWGLMYYAAGPCAADCARVVELLLTVRSLIGAHGARVH-VAALVDAAPSPA------IAQALTIVDADARALLAREAAARTGTHREHG-IVLLDSQRLAMMIYAVDASPVGIKEDLKRLLRGSAI 528
+ALVA F+ P+L+A+++ P G +N G+L+ PP DL AL +W +Y++ C C V+E L+ +R G H R+ + A+V + P+ A ++ A + E G I LLD MM Y + P I++DL RL+R S +
Sbjct: 18 IALVAVFIAPVLVAFFWQ-------PTGYVNRGQLIEPPRLVSDLAMHMINGRATALSSLKGKWTYVYFSHEVCDQTCNAVIESLVRIRLSRGKHKHRIQFLVAIVSPSAPPSDERVSHSAVRTAYIEKSALGRWRKAFGVEDSAPPEAGRIYLLDPLGYLMMSYPLAIDPNDIRKDLARLMRVSRV 197
BLAST of mRNA_P-wetherbeei_contig15098.2.1 vs. uniprot
Match: A0A523LL39_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523LL39_9GAMM) HSP 1 Score: 53.1 bits (126), Expect = 2.290e-5 Identity = 55/194 (28.35%), Postives = 86/194 (44.33%), Query Frame = 1
Query: 1 LALVAAFVVPILIAWWFAIMHPEAVPQGQLNHGELLHPPIDLKPAAA------GAALDALKLAPAE--WGLMYYAAGPCAADCARVVELLLTVRSLIGAHGARVHVAALVDAAPSPAIA-----QALTIV---DADARALLAREAAART---GTHREHGIVLLDSQRLAMMIYAVDASPVGIKEDLKRLLRGSA 525
L++ AAF++P+L+AWW P+ N G L+ PP+ ++ A G + L P + W L+Y A C C + + +G RV LV+ A SPA + LT++ A + L A A AR G + + LLD + ++ Y A+ I D++RLL+ SA
Sbjct: 8 LSVTAAFLLPVLLAWWLNFGPWPWRPEAAGNRGTLIQPPVLVESAGVRSLVHPGLGYEGLASEPFQGHWSLVYAGASDCPNACEAALVNMRQSWLALGKDARRVRRWFLVNDAKSPASSLLEEHPGLTVIALTSASSGTLGAALAVARETAGGANAGEWVWLLDPRGFVILSYGSSATATDILRDMQRLLKYSA 201 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15098.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15098.2.1 >prot_P-wetherbeei_contig15098.2.1 ID=prot_P-wetherbeei_contig15098.2.1|Name=mRNA_P-wetherbeei_contig15098.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=178bp LALVAAFVVPILIAWWFAIMHPEAVPQGQLNHGELLHPPIDLKPAAAGAAback to top mRNA from alignment at P-wetherbeei_contig15098:410..943- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15098.2.1 ID=mRNA_P-wetherbeei_contig15098.2.1|Name=mRNA_P-wetherbeei_contig15098.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=534bp|location=Sequence derived from alignment at P-wetherbeei_contig15098:410..943- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15098:410..943- >mRNA_P-wetherbeei_contig15098.2.1 ID=mRNA_P-wetherbeei_contig15098.2.1|Name=mRNA_P-wetherbeei_contig15098.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=534bp|location=Sequence derived from alignment at P-wetherbeei_contig15098:410..943- (Phaeothamnion wetherbeei SAG_119_79)back to top |