mRNA_P-wetherbeei_contig1509.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1509.1.1 vs. uniprot
Match: A0A6H5KEM7_9PHAE (Tafazzin family protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEM7_9PHAE) HSP 1 Score: 283 bits (723), Expect = 4.110e-85 Identity = 145/260 (55.77%), Postives = 174/260 (66.92%), Query Frame = 3
Query: 453 LNRVRVVEGRDVLLDAVLRRPAGRALLTVSNHQSVYDDPGLWAAILPFWRTGAAKMRWALCTDDIYYASSLLTPMLALGRTLPVKRHLGVDQPLLGKFADKLRQGEWCHIFAEGRIRQPWRFARGEPVLGGFKPGVSRILFRCKEPPLVIPMYHIGMHGVCPEEPCPAYLPAKLQTAYPAGGNRVRVYVGEPVDVWPIVLRWREGFPGQPGLGDMSGEPWGRCCAAGFDVERRCYAEIADALREAVLKLEAKARRDYFRD 1232
LN+V R LLDAVL R R LLTVSNH VYDDPGLW+A++PFWRTG +MRWALCTDDIYYA +L + GRTLP+KR+ G++QPL F KL GEW HIFAEG IRQPWRF+RGEP+LG FK G+ R+L R K+PPLV+PMYHIGMH + E P KL P G VRVYVGEP+DV PI+ + RE +GD+ PW + + E C+ EIA +RE VLKLEA AR+DY+ D
Sbjct: 188 LNKVEC-HNRQELLDAVLDR-GDRGLLTVSNHMCVYDDPGLWSALVPFWRTGRKRMRWALCTDDIYYAHPVLKNIFDAGRTLPIKRNRGMEQPLFKAFFQKLEGGEWGHIFAEGAIRQPWRFSRGEPILGDFKAGIGRLLLRSKDPPLVLPMYHIGMHQIASEAPTHKRGRGKLLKIMPNFGRTVRVYVGEPIDVAPIIEKCRER------IGDVRNLPWTKRSSM---EEVACHREIAAYIREHVLKLEAVARKDYYGD 436
BLAST of mRNA_P-wetherbeei_contig1509.1.1 vs. uniprot
Match: A0A835Z8H0_9STRA (Tafazzin family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H0_9STRA) HSP 1 Score: 213 bits (541), Expect = 2.660e-59 Identity = 115/261 (44.06%), Postives = 146/261 (55.94%), Query Frame = 3
Query: 450 VLNRVRVVEGRDVLLDAVLRRPAGRALLTVSNHQSVYDDPGLWAAILPFWRTGAAKMRWALCTDDIYYASSLLTPMLALGRTLPVKRHLGVDQPLLGKFADKLRQGEWCHIFAEGRIRQPWRFARGEPVLGGFKPGVSRILFRCKEPPLVIPMYHIGMHGVCPEEPCPAYLPAKLQTAYPAGGNRVRVYVGEPVDVWPIVLRWREGFPGQPGLGDMSGEPWGRCCAAGFDVERRCYAEIADALREAVLKLEAKARRDYFRD 1232
VLNRVRV L+ V R G LLTVSNH SV DDPGLW AILPFWR G KMRW+LCTDD+Y+A L P + +G+P+LG FK GV R++ RC P+++PMYHIGMH + PE+P P AKLQ A+ G +VR+YVGEPV+V I+ +W++G+ GQ G+GD+S PW G E C+ EI A+R+AVL+LE ARRDY+ D
Sbjct: 166 VLNRVRVTNLSG-LIRHVDHRTEGTPLLTVSNHMSVLDDPGLWGAILPFWRLGPRKMRWSLCTDDVYFAVKPLVPF----------------------------------------------YRQGQPILGDFKAGVGRLVARCSSTPVIVPMYHIGMHTIAPEQPVPRRAAAKLQRAFSVG-RQVRMYVGEPVEVEHILNKWKQGWDGQEGIGDVSKFPWSE---RGTLAELACHEEITAAIRDAVLELEKVARRDYYGD 375
BLAST of mRNA_P-wetherbeei_contig1509.1.1 vs. uniprot
Match: A0A7S2UUF3_9STRA (Tafazzin family protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUF3_9STRA) HSP 1 Score: 208 bits (529), Expect = 4.580e-57 Identity = 106/256 (41.41%), Postives = 152/256 (59.38%), Query Frame = 3
Query: 456 NRVRVVEGRDVLLDAVLRRPAGRALLTVSNHQSVYDDPGLWAAILPFWRTGAAKMRWALCTDDIYYASSLLTPMLALGRTLPVKRHLGVDQPLLGKFADKLRQGEWCHIFAEGRIRQPWRFARGEPVLGGFKPGVSRILFRCKEPPLVIPMYHIGMHGVCPEEPCPAYLPAKLQTA-YPAGGNRVRVYVGEPVDVWPIVLR-WRE-GFPGQPGLGDMSGEPWGRCCAAGFDVERRCYAEIADALREAVLKLEAKAR 1214
N+V V +++L+D V R G +L+VSNH S+YDDPGLW+AI+P+WR +R++LC DD+Y+ S LTP+ G+ LPV R G +Q + + + + +G WCHIFAEG+I QPWR+ GEPVLG + G S++L P +IPMYH GMH + PE+P L + +P GGNRV V++G+P V I+ + W+E G PG + S V R +I + E +L+LEA+AR
Sbjct: 177 NKV-VTHRKELLMDCVYNREPGVGILSVSNHMSMYDDPGLWSAIIPWWRMPHRLLRYSLCNDDMYFVSKYLTPIFLAGKALPVSRKAGPNQQFMKDYTEVVDEGNWCHIFAEGKINQPWRYEEGEPVLGKLRIGASKLLTHLSHSPWIIPMYHFGMHDILPEKPQKNKLRVSTPISMWPRGGNRVDVFIGKPFTVTDILEKMWQEVGGPGSVAWDNDS-------------VLRSYQDQITARITEKILELEAEAR 418
BLAST of mRNA_P-wetherbeei_contig1509.1.1 vs. uniprot
Match: D8LB90_ECTSI (Tafazzin family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB90_ECTSI) HSP 1 Score: 187 bits (474), Expect = 8.610e-50 Identity = 88/142 (61.97%), Postives = 102/142 (71.83%), Query Frame = 3
Query: 453 LNRVRVVEGRDVLLDAVLRRPAGRALLTVSNHQSVYDDPGLWAAILPFWRTGAAKMRWALCTDDIYYASSLLTPMLALGRTLPVKRHLGVDQPLLGKFADKLRQGEWCHIFAEGRIRQPWRFARGEPVLGGFKPGVSRILFR 878
LN+V R LLDAVL R R LLTVSNH VYDDPGLW+A++PFWRTG +MRWALCTDDIYYA +L + GRTLP+KR G++QPL F KL GEW HIFAEG IRQPWRF+R EP+L FK G+ R+L R
Sbjct: 179 LNKVEC-HNRQALLDAVLDR-GDRGLLTVSNHMCVYDDPGLWSALIPFWRTGRRRMRWALCTDDIYYAHPVLKNIFEAGRTLPIKRTRGMEQPLFKAFFQKLEGGEWGHIFAEGAIRQPWRFSRDEPILADFKAGIGRLLLR 318
BLAST of mRNA_P-wetherbeei_contig1509.1.1 vs. uniprot
Match: A0A7S0U611_HEMAN (Tafazzin family protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U611_HEMAN) HSP 1 Score: 178 bits (451), Expect = 5.070e-46 Identity = 99/266 (37.22%), Postives = 150/266 (56.39%), Query Frame = 3
Query: 450 VLNRVRVVEGRDVLLDAVLRRPAGRALLTVSNHQSVYDDPGLWAAILPFWRTGAAKMRWALCTDDIYYASSLLTPMLA-----LGRTLPVKRHLGVDQPLLGKFADKLRQGEWCHIFAEGRIRQPWRFARGEPVLGGFKPGVSRILFRC---KEPPLVIPMYHIGMHGVCPEEPCPAYLPAKLQTAYPAGGNRVRVYVGEPVDVWPIVLRWREGFP-GQPGLGDMSGEPWGRCCAAGFDVERRCYAEIADALREAVLKLEAKARRD 1220
+LNRV + + + L DA+ +RP G L+TVSNHQS D+P L++A++P W ++RW+LC D+++Y +L P+ A R LP+ R ++QP +F DK R G WCHIF EGR+ QPW+ + +LG +PGV +++ C K PPLV+P YH GMH + P+ P K Q P GN++RV VGEP+DV ++ + R G + LG G W + + YAE+ + + A++ L + +D
Sbjct: 153 ILNRVEISDHKR-LTDAISKRPRGTPLITVSNHQSSLDEPLLFSAVIP-WPIRQWQLRWSLCNDNMFY---VLGPVFAQLFFHAARGLPIWRSQSINQPSFKEFCDKARDGGWCHIFPEGRLWQPWKLRKEGRLLGNLRPGVGKLVGHCETSKHPPLVVPFYHTGMHRILPQFPANP----KKQALPPKTGNKIRVRVGEPIDVSDLIEKHRGGREEARKELGVTDG--W-----TTTEADEALYAEVTERVEAALVALAKQVDQD 402
BLAST of mRNA_P-wetherbeei_contig1509.1.1 vs. uniprot
Match: A0A6V1V5J4_HETAK (Tafazzin family protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1V5J4_HETAK) HSP 1 Score: 162 bits (410), Expect = 1.340e-40 Identity = 99/273 (36.26%), Postives = 139/273 (50.92%), Query Frame = 3
Query: 450 VLNRVRVVEGRDVLLDAVLRRPAGRALLTVSNHQSVYDDPGLWAAILPFWRTGAAKMRWALCTDDIYYASSLLTPMLALGRTLPVKRHLGVDQPLLGKFADKLRQGEWCHIFAEGRIRQPWRFARGEPVLGGFKPGVSRILFRCKEPPLVIPMYHIGMHGVCPEEPCPAYLPAKLQ----------TAYPAGGNRVRVYVGEPVDVWPIVLRWREGFPGQPGLGDMSGEPWGRCCAAGFDVERRCYAEIADALREAVLKLEAKARRDYFRDKG 1238
VLN+ +V L +L R G L T SNH S+ DDPGL A +P+ LC D+Y+ +LT + LG+ +PV R G +Q + F +KL +WCHIFAEG+I QPWRF R EP LG F+ G +++L + P+ +PMYHIGMH V PE P K Q +A P GN++ ++VGEP V P + R + LG G W A + ++ + LRE +L++EA+AR + G
Sbjct: 124 VLNKTKV-HNYKTLEKLMLERDEGVGLFTYSNHHSMLDDPGLPALFMPWHSXXXXXXXXNLCNTDMYFVHPVLTHIFRLGKGMPVSRFEGPEQRYMRDFTEKLNNKDWCHIFAEGKIVQPWRFERDEPHLGEFRIGPAKVLTHQDKAPICLPMYHIGMHNVYPER---QLKPKKGQKKARGASTPISAIPRIGNQIDIFVGEPFSVEPWIERVKA-------LG-AQGVTWENDAAY-----KEIQEDLTNHLRERLLEVEAQARPYLYGGSG 379
BLAST of mRNA_P-wetherbeei_contig1509.1.1 vs. uniprot
Match: A0A7S4DV10_9EUKA (Tafazzin family protein n=3 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DV10_9EUKA) HSP 1 Score: 161 bits (408), Expect = 1.820e-40 Identity = 95/258 (36.82%), Postives = 141/258 (54.65%), Query Frame = 3
Query: 456 NRVRVVEGRDVLLDAVLRRPAGRALLTVSNHQSVYDDPGLWAAILPFWRTGAAKMR----WALCTDDIYYASSLLTPMLALGRTLPVKRHL--GVDQPLLGKFADKLRQGEWCHIFAEGRIRQPWRFARGEPVLGGFKPGVSRILFRCKEPPLVIPMYHIGMHGVCPEEPCPAYLPAKLQTAYPAGGNRVRVYVGEPVDVWPIVLRWREGFPGQPGLGDMSGEPWGRCCAAGFDVERRCYAEIADALREAVLKLEAKA 1211
N V+V + L+DAV R L TVSNH S+ D P + AA+ P+ + ++ W LCTD ++A+ + L+ G+ +P+KR G+ Q L F DKL GEWCH++ EG+I QPWRFA+G+ LG F PGV +++ C+ P+++P+YH GM + PEE +PAK + +P G V +YVGEP+D+ +V QP G W + D + R + IA +R A+ LE +A
Sbjct: 125 NTVKVHHA-ERLIDAVHNRANNTGLFTVSNHASMLD-PAIIAAVYPWEESKEETLKQWPPWTLCTDS-FFANPVARFWLSAGKAMPIKRASPKGLRQKFLKDFKDKLDDGEWCHMYPEGKITQPWRFAKGKSRLGKFLPGVGKLITTCRNRPMLVPIYHKGMDTILPEEEGDPRMPAKPISLFPKFGKHVDIYVGEPIDLSDLV---------QPTNASPEGSEWTEWESESKD-DLRQWLAIAKRVRAAMKDLEEEA 369
BLAST of mRNA_P-wetherbeei_contig1509.1.1 vs. uniprot
Match: A0A1V9YC99_9STRA (Tafazzin family protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YC99_9STRA) HSP 1 Score: 159 bits (402), Expect = 4.330e-40 Identity = 95/266 (35.71%), Postives = 138/266 (51.88%), Query Frame = 3
Query: 450 VLNRVRVVEGRDVLLDAVLRRPAGRALLTVSNHQSVYDDPGLWAAILPFWRTGAAKMRWALCTDDIYYASSLLTPMLALG-RTLPVKRHLGVDQPLLGKFADKLRQGEWCHIFAEGRIRQPWRFARGEPVL----GGFKPGVSRILFRCKEPPLVIPMYHIGMHGVCPEEPCPAYLPAKLQTAYPAGGNRVRVYVGEPVDVWPIVLRWRE----GFPGQPGLGDMSGEPWGRCCAAGFDVERRCYAEIADALREAVLKLEAKARRD 1220
+LN V + + D L ++ RP RAL+TV+NH S DDP L+A +LP+ RW LC+ + Y L L G +TLP+KR G+D P+L K+++GEW H+F EG+I Q R + E L GG K GV +++ R +E P+VIP+YH+G+ V P+ KL++ P G RV VGEP+ + +++ E G GQ W D ER+ Y+ I + EA+L LEA+ D
Sbjct: 77 MLNTVSM-KNEDALAQWIIARPRHRALITVTNHSSTVDDPALFACLLPWSCANPRLSRWGLCSQEYCYTKGPLLSALFYGSKTLPIKRGAGIDHPMLMDLFKKVQEGEWVHVFPEGKIVQGGRLGQREDKLQKEIGGLKWGVGKLIARAEETPIVIPIYHLGLDSVMPQN-----ANHKLKSMIPRIGQRVHARVGEPIYFDDLFVKYAEDRVQGIEGQD-------HTW-----VSLDKERQLYSAITRRIEEALLALEAQCYED 324
BLAST of mRNA_P-wetherbeei_contig1509.1.1 vs. uniprot
Match: A0A067CGR4_SAPPC (Tafazzin family protein n=4 Tax=Saprolegnia TaxID=4769 RepID=A0A067CGR4_SAPPC) HSP 1 Score: 147 bits (372), Expect = 6.750e-36 Identity = 86/256 (33.59%), Postives = 133/256 (51.95%), Query Frame = 3
Query: 471 VEGRDVLLDAVLRRPAGRALLTVSNHQSVYDDPGLWAAILPFWRTGAAKMRWALCTDDIYYASS-LLTPMLALGRTLPVKRHLGVDQPLLGKFADKLRQGEWCHIFAEGRIRQPWRFA-RGEPV---LGGFKPGVSRILFRCKEPPLVIPMYHIGMHGVCPEEPCPAYLPAKLQTAYPAGGNRVRVYVGEPVDVWPIVLRW-REGFPGQPGLGDMSGEPWGRCCAAGFDVERRCYAEIADALREAVLKLEAKARRD 1220
++ D L +L RP R+L+TV+NH S DDP L+A +LP+ RW LC+ + Y LL+ + +TLP+KR G+D P+L K++ GEW H+F EG+I Q R EP+ +GG K GV +++ R +E P+V+P+YH+G+ V P+ KL++ P GN V V VGEP+ + ++ ++ G G + W E Y++I + A+L LEA+ D
Sbjct: 86 MQNEDALAKWILARPRHRSLITVTNHSSTVDDPALFARMLPWACANPRVSRWGLCSQEYCYTKGPLLSAVFYGSKTLPIKRGAGIDHPMLHDLFKKVQMGEWVHVFPEGKIVQGGHLGQRDEPMQTNIGGLKWGVGKLIARAEETPIVVPIYHLGLDAVMPQN-----ANHKLKSMIPTTGNHVHVRVGEPIYFDDLFEKYAKDRVQGAEGP-----DSW-----VSKSSEHALYSDITRRIEHALLALEAQCYED 326
BLAST of mRNA_P-wetherbeei_contig1509.1.1 vs. uniprot
Match: F0WJG4_9STRA (Tafazzin family protein n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WJG4_9STRA) HSP 1 Score: 147 bits (370), Expect = 1.030e-35 Identity = 87/256 (33.98%), Postives = 130/256 (50.78%), Query Frame = 3
Query: 450 VLNRVRVVEGRDVLLDAVLRRPAGRALLTVSNHQSVYDDPGLWAAILPFWRTGAAKMRWALCTDDIYYASSLLTPMLALG-RTLPVKRHLGVDQPLLGKFADKLRQGEWCHIFAEGRIRQPWRFARGEPV----LGGFKPGVSRILFRCKEPPLVIPMYHIGMHGVCPEEPCPAYLPAKLQTAYPAGGNRVRVYVGEPVDVWPIVLRWREGFPGQPGLGDMSGEPWGRCCAAGFDVERRCYAEIADALREAVLKLE 1202
V NR+ EG +VLLD + RP G+ALLTVSNH + DDPG++A ILP+ + +RW+LC+ + Y L L +TLP+KR GVDQ LL ++++ G+W HIF EG+I Q E +G K GV +++ R PP+VIP+YH M+ + P++ ++ P N V V VG+P+D + + + E + E+ Y+ I + EA+L LE
Sbjct: 75 VFNRLSC-EGNEVLLDKLKNRPKGKALLTVSNHTATVDDPGIFAGILPWSLLTPSNIRWSLCSQEYCYTKGRLASALFYSAKTLPIKRGAGVDQELLHDIFERIQDGQWVHIFPEGKITQDGSLGGREGADRDKIGRLKWGVGKLIARADTPPVVIPIYHFNMNKLMPQDEN-----NEVINVLPRTNNEVFVRVGQPIDFEDLFQEYEKERVKASNASSWDSE----------EKEKVLYSAITRRIEEALLNLE 314 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1509.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1509.1.1 >prot_P-wetherbeei_contig1509.1.1 ID=prot_P-wetherbeei_contig1509.1.1|Name=mRNA_P-wetherbeei_contig1509.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=235bp MRWALCTDDIYYASSLLTPMLALGRTLPVKRHLGVDQPLLGKFADKLRQGback to top mRNA from alignment at P-wetherbeei_contig1509:3455..6815+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1509.1.1 ID=mRNA_P-wetherbeei_contig1509.1.1|Name=mRNA_P-wetherbeei_contig1509.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3361bp|location=Sequence derived from alignment at P-wetherbeei_contig1509:3455..6815+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1509:3455..6815+ >mRNA_P-wetherbeei_contig1509.1.1 ID=mRNA_P-wetherbeei_contig1509.1.1|Name=mRNA_P-wetherbeei_contig1509.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=705bp|location=Sequence derived from alignment at P-wetherbeei_contig1509:3455..6815+ (Phaeothamnion wetherbeei SAG_119_79)back to top |