mRNA_P-wetherbeei_contig15085.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15085.2.1 vs. uniprot
Match: A0A537RFD2_9PROT (TRAP transporter small permease subunit n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537RFD2_9PROT) HSP 1 Score: 377 bits (968), Expect = 3.320e-131 Identity = 185/220 (84.09%), Postives = 200/220 (90.91%), Query Frame = 1
Query: 1 MYVQRFLHTIDGISTWVGKFAAWLIIVLMAVVCIEVFKRYILNTPTAWIFDGENMLYGSLFMLGGAYTLAQNAHVRGDFLYSSMQPRTQAALDLVLYIVFFIPGIAALIYAGFTFAVESWQIAEHSNVTADGPPVYQFKSVIPIAGALVMLQGFAEIVRCVVCLQTGEWPSRLADVAETDVIEEQLAHSEYVDEESRKVAIERAHKIDETARQRGMGSEL 660
M V+RFLH IDGISTWVGK AAWLII L AVVCIEVFKRYILN PTAWIFD ENM YG+LFML GAYTLAQNAHVRGDFLYSSM+PR QA LDLVLY+VFFIPGIAALIYAG+ +A +SW IAEHSNVTADGPPVY FKSVIP+AG L+MLQG AEIVRC+VCL+TGEWPSRL DVAE DV+EEQLAHSEYVDEESRK+AIERAH+IDETARQRGMG +L
Sbjct: 1 MTVERFLHAIDGISTWVGKLAAWLIIGLTAVVCIEVFKRYILNAPTAWIFDAENMFYGTLFMLAGAYTLAQNAHVRGDFLYSSMRPRMQAWLDLVLYVVFFIPGIAALIYAGYHYAADSWHIAEHSNVTADGPPVYHFKSVIPLAGVLIMLQGVAEIVRCIVCLKTGEWPSRLKDVAEMDVVEEQLAHSEYVDEESRKIAIERAHEIDETARQRGMGGDL 220
BLAST of mRNA_P-wetherbeei_contig15085.2.1 vs. uniprot
Match: UPI001E3F713F (TRAP transporter small permease subunit n=1 Tax=Leptospira sp. severe_002 TaxID=2838237 RepID=UPI001E3F713F) HSP 1 Score: 376 bits (965), Expect = 9.520e-131 Identity = 188/222 (84.68%), Postives = 201/222 (90.54%), Query Frame = 1
Query: 1 MYVQRFLHTIDGISTWVGKFAAWLIIVLMAVVCIEVFKRYILNTPTAWIFDGENMLYGSLFMLGGAYTLAQNAHVRGDFLYSSMQPRTQAALDLVLYIVFFIPGIAALIYAGFTFAVESWQIAEHSNVTADGPPVYQFKSVIPIAGALVMLQGFAEIVRCVVCLQTGEWPSRLADVAETDVIEEQLAHSEYVDEESRKVAIERAHKIDETARQRGMGSELQS 666
M VQ+FLHT+DGISTWVGK AAWLIIVLM VVC+EVFKRYI+N PT+WIFD NMLYGSLFML GAYTLAQNAHVRGDFLYSSM+PRTQA LDL+LY VFFIPGI AL YAG+ FA ESW+IAEHSNVTADGPPVY FKS+IPIAGAL+MLQG AEIVRCVVCL+ GEWPSRL DVAE DVIEEQLAHSEYVDEESRK+AIE A KIDE ARQRGMGSELQS
Sbjct: 1 MTVQKFLHTVDGISTWVGKAAAWLIIVLMTVVCVEVFKRYIMNMPTSWIFDLNNMLYGSLFMLCGAYTLAQNAHVRGDFLYSSMRPRTQAFLDLILYFVFFIPGILALCYAGYYFAQESWRIAEHSNVTADGPPVYHFKSIIPIAGALIMLQGVAEIVRCVVCLKEGEWPSRLKDVAEIDVIEEQLAHSEYVDEESRKIAIEGAQKIDEAARQRGMGSELQS 222
BLAST of mRNA_P-wetherbeei_contig15085.2.1 vs. uniprot
Match: UPI001BA72896 (TRAP transporter small permease subunit n=1 Tax=Bradyrhizobium sp. AUGA SZCCT0283 TaxID=2807671 RepID=UPI001BA72896) HSP 1 Score: 372 bits (955), Expect = 3.180e-129 Identity = 186/222 (83.78%), Postives = 202/222 (90.99%), Query Frame = 1
Query: 1 MYVQRFLHTIDGISTWVGKFAAWLIIVLMAVVCIEVFKRYILNTPTAWIFDGENMLYGSLFMLGGAYTLAQNAHVRGDFLYSSMQPRTQAALDLVLYIVFFIPGIAALIYAGFTFAVESWQIAEHSNVTADGPPVYQFKSVIPIAGALVMLQGFAEIVRCVVCLQTGEWPSRLADVAETDVIEEQLAHSEYVDEESRKVAIERAHKIDETARQRGMGSELQS 666
M VQ FLHTIDGISTWVGK AWL+IVLM+VVCIEVFKRYI+N PT+WIFD +NMLYGSLFML GAYTLAQNAHVRGDFLYSSM+PRTQA LDLVLYIVFF+PGIAAL YAG+ +A +SW IAEHSNVTADGPPVY FKSVIPIAGAL+MLQG AEIVRCVVCLQTGEWPSRL DVAE DVIEEQLAHSEYVDEESRK+AIE A +IDE ARQRGMG ++Q+
Sbjct: 1 MSVQSFLHTIDGISTWVGKATAWLMIVLMSVVCIEVFKRYIMNMPTSWIFDLDNMLYGSLFMLCGAYTLAQNAHVRGDFLYSSMRPRTQAMLDLVLYIVFFLPGIAALCYAGYFYAADSWHIAEHSNVTADGPPVYHFKSVIPIAGALIMLQGIAEIVRCVVCLQTGEWPSRLKDVAEIDVIEEQLAHSEYVDEESRKMAIEGAARIDEMARQRGMGGDVQT 222
BLAST of mRNA_P-wetherbeei_contig15085.2.1 vs. uniprot
Match: A0A0R3M1E8_9BRAD (Uncharacterized protein n=15 Tax=Bradyrhizobium TaxID=374 RepID=A0A0R3M1E8_9BRAD) HSP 1 Score: 371 bits (953), Expect = 6.410e-129 Identity = 182/220 (82.73%), Postives = 201/220 (91.36%), Query Frame = 1
Query: 1 MYVQRFLHTIDGISTWVGKFAAWLIIVLMAVVCIEVFKRYILNTPTAWIFDGENMLYGSLFMLGGAYTLAQNAHVRGDFLYSSMQPRTQAALDLVLYIVFFIPGIAALIYAGFTFAVESWQIAEHSNVTADGPPVYQFKSVIPIAGALVMLQGFAEIVRCVVCLQTGEWPSRLADVAETDVIEEQLAHSEYVDEESRKVAIERAHKIDETARQRGMGSEL 660
M VQR LHTIDGISTWVGK +AWL+I+LM+VVCIEVFKRY +N PTAWIFD ENM+YGSLFML GAYTLAQNAHVRGDFLYSSM+PRTQAALDLVLY VFFIPGIAAL+YAG+ +A +SW I EHSNVTADGPPVY FK+VIPIAGAL+MLQG AEI+RC+VCL+TGEWPSRL DVAETDVIEEQLAHSEYVDEESRK+AIE A +IDE ARQRGMG +L
Sbjct: 1 MNVQRLLHTIDGISTWVGKASAWLMILLMSVVCIEVFKRYAVNMPTAWIFDVENMMYGSLFMLAGAYTLAQNAHVRGDFLYSSMRPRTQAALDLVLYFVFFIPGIAALVYAGYFYAADSWHINEHSNVTADGPPVYHFKTVIPIAGALIMLQGIAEIIRCIVCLKTGEWPSRLKDVAETDVIEEQLAHSEYVDEESRKIAIEGAARIDEMARQRGMGGDL 220
BLAST of mRNA_P-wetherbeei_contig15085.2.1 vs. uniprot
Match: A0A0R3MAW2_9BRAD (Uncharacterized protein n=2 Tax=Bradyrhizobium lablabi TaxID=722472 RepID=A0A0R3MAW2_9BRAD) HSP 1 Score: 369 bits (948), Expect = 3.700e-128 Identity = 180/222 (81.08%), Postives = 202/222 (90.99%), Query Frame = 1
Query: 1 MYVQRFLHTIDGISTWVGKFAAWLIIVLMAVVCIEVFKRYILNTPTAWIFDGENMLYGSLFMLGGAYTLAQNAHVRGDFLYSSMQPRTQAALDLVLYIVFFIPGIAALIYAGFTFAVESWQIAEHSNVTADGPPVYQFKSVIPIAGALVMLQGFAEIVRCVVCLQTGEWPSRLADVAETDVIEEQLAHSEYVDEESRKVAIERAHKIDETARQRGMGSELQS 666
M VQRFLHTIDGISTWVGK AWL+++LM+VVCIEVFKRYI+N PTAWIFD ENM+YG+LFM+ GAYTLAQNAHVRGDFLYSSM+PRTQA+LDLVLYIVFFIPGIAALIYAG+ +A +SW I EHSNVTADGPP+Y FK+VIPIAGAL+MLQG EIVRC+VCL+TGEWPSRL DVAE DV+EEQLAHSEYVDEESRK+AIE A +IDE ARQRGMG E Q+
Sbjct: 1 MSVQRFLHTIDGISTWVGKATAWLMVLLMSVVCIEVFKRYIVNMPTAWIFDAENMMYGTLFMMCGAYTLAQNAHVRGDFLYSSMRPRTQASLDLVLYIVFFIPGIAALIYAGYFYAADSWHINEHSNVTADGPPIYHFKTVIPIAGALIMLQGIGEIVRCIVCLKTGEWPSRLHDVAEIDVVEEQLAHSEYVDEESRKLAIEGAARIDEMARQRGMGGETQT 222
BLAST of mRNA_P-wetherbeei_contig15085.2.1 vs. uniprot
Match: A0A1I3JJQ5_9BRAD (TRAP-type mannitol/chloroaromatic compound transport system, small permease component n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1I3JJQ5_9BRAD) HSP 1 Score: 366 bits (939), Expect = 8.700e-127 Identity = 180/220 (81.82%), Postives = 201/220 (91.36%), Query Frame = 1
Query: 1 MYVQRFLHTIDGISTWVGKFAAWLIIVLMAVVCIEVFKRYILNTPTAWIFDGENMLYGSLFMLGGAYTLAQNAHVRGDFLYSSMQPRTQAALDLVLYIVFFIPGIAALIYAGFTFAVESWQIAEHSNVTADGPPVYQFKSVIPIAGALVMLQGFAEIVRCVVCLQTGEWPSRLADVAETDVIEEQLAHSEYVDEESRKVAIERAHKIDETARQRGMGSEL 660
M VQRFL +D ISTW GK AAWLII+LMAVVC+EVFKRYI+N PTAWIFD +N+LYG+ FML GAYTLAQNAHVRGDFLYSSM+PR QA+LD+VLY+VFFIPGIAALIYAGF +A +SW+IAEHSNVTADGPPVY FKS+IPIAG LVMLQG AEIVRCVVCL+TGEWPSRL DVAE DVIE+QLAHSEYVDEESRK+AIERAH+IDE+ARQRGMG +L
Sbjct: 1 MTVQRFLLVVDEISTWCGKVAAWLIILLMAVVCVEVFKRYIMNMPTAWIFDLDNILYGTAFMLCGAYTLAQNAHVRGDFLYSSMRPRMQASLDIVLYVVFFIPGIAALIYAGFDYAADSWRIAEHSNVTADGPPVYHFKSMIPIAGGLVMLQGIAEIVRCVVCLRTGEWPSRLKDVAEIDVIEQQLAHSEYVDEESRKIAIERAHEIDESARQRGMGGDL 220
BLAST of mRNA_P-wetherbeei_contig15085.2.1 vs. uniprot
Match: UPI000B4BB227 (TRAP transporter small permease subunit n=1 Tax=Rhodomicrobium TaxID=1068 RepID=UPI000B4BB227) HSP 1 Score: 365 bits (938), Expect = 1.240e-126 Identity = 179/221 (81.00%), Postives = 201/221 (90.95%), Query Frame = 1
Query: 1 MYVQRFLHTIDGISTWVGKFAAWLIIVLMAVVCIEVFKRYILNTPTAWIFDGENMLYGSLFMLGGAYTLAQNAHVRGDFLYSSMQPRTQAALDLVLYIVFFIPGIAALIYAGFTFAVESWQIAEHSNVTADGPPVYQFKSVIPIAGALVMLQGFAEIVRCVVCLQTGEWPSRLADVAETDVIEEQLAHSEYVDEESRKVAIERAHKIDETARQRGMGSELQ 663
M VQRFLHTIDGISTWVGK AAWLI++LM VVC+EV KRY LN+PTAWIFD ENM+YGSLFML GAYTLAQNAHVRGDFLYSSM+PRTQA LDLVLYI FF+PGIAALIYAG FA +SW+I EHSNVTA+GPP+Y FK+V+PIAGALVMLQG AEIVRCV+CL+TGEWP+RL DV+E DV+ EQLA+SEYVDEESRK+AIERAH+IDE ARQRGMG +LQ
Sbjct: 1 MTVQRFLHTIDGISTWVGKAAAWLIVLLMTVVCVEVIKRYWLNSPTAWIFDAENMIYGSLFMLCGAYTLAQNAHVRGDFLYSSMRPRTQALLDLVLYIAFFLPGIAALIYAGTEFAADSWRIGEHSNVTAEGPPMYHFKTVMPIAGALVMLQGIAEIVRCVMCLKTGEWPTRLKDVSEIDVVGEQLANSEYVDEESRKIAIERAHEIDELARQRGMGGDLQ 221
BLAST of mRNA_P-wetherbeei_contig15085.2.1 vs. uniprot
Match: A0A371BC14_9HYPH (Uncharacterized protein n=1 Tax=Pseudolabrys sp. GY_H TaxID=2292256 RepID=A0A371BC14_9HYPH) HSP 1 Score: 364 bits (934), Expect = 5.030e-126 Identity = 179/220 (81.36%), Postives = 196/220 (89.09%), Query Frame = 1
Query: 1 MYVQRFLHTIDGISTWVGKFAAWLIIVLMAVVCIEVFKRYILNTPTAWIFDGENMLYGSLFMLGGAYTLAQNAHVRGDFLYSSMQPRTQAALDLVLYIVFFIPGIAALIYAGFTFAVESWQIAEHSNVTADGPPVYQFKSVIPIAGALVMLQGFAEIVRCVVCLQTGEWPSRLADVAETDVIEEQLAHSEYVDEESRKVAIERAHKIDETARQRGMGSEL 660
M VQR LHTIDGISTWVGK AAWLII LM +VC+EVFKRYI+N PTAWIFD NM YG+LFML GAYTLAQNAHVRGDFLYSSM+PR QA LDLVLYI+FF PGIAAL+YAG+ +A SW I EHSNVTA+GPPVY FKSVIPIAGA VMLQG AE++RCVVCL+TGEWPSRL DVAETDVIEEQLAHSE+VD+E+RK+AIERA IDETARQRGMGSEL
Sbjct: 1 MNVQRLLHTIDGISTWVGKAAAWLIIGLMMLVCVEVFKRYIMNMPTAWIFDASNMFYGTLFMLAGAYTLAQNAHVRGDFLYSSMRPRMQAGLDLVLYILFFFPGIAALMYAGYDYAANSWIIGEHSNVTANGPPVYHFKSVIPIAGAFVMLQGVAEVIRCVVCLKTGEWPSRLKDVAETDVIEEQLAHSEFVDDEARKIAIERAKSIDETARQRGMGSEL 220
BLAST of mRNA_P-wetherbeei_contig15085.2.1 vs. uniprot
Match: A0A127ENP3_9HYPH (Tripartite AtP-independent periplasmic transporter subunit DctQ n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127ENP3_9HYPH) HSP 1 Score: 363 bits (932), Expect = 1.010e-125 Identity = 181/220 (82.27%), Postives = 200/220 (90.91%), Query Frame = 1
Query: 1 MYVQRFLHTIDGISTWVGKFAAWLIIVLMAVVCIEVFKRYILNTPTAWIFDGENMLYGSLFMLGGAYTLAQNAHVRGDFLYSSMQPRTQAALDLVLYIVFFIPGIAALIYAGFTFAVESWQIAEHSNVTADGPPVYQFKSVIPIAGALVMLQGFAEIVRCVVCLQTGEWPSRLADVAETDVIEEQLAHSEYVDEESRKVAIERAHKIDETARQRGMGSEL 660
M VQ+ LH IDG+STWVGK AAWLI+VLMAVVCIEVFKRYILN PTAWIFD +NMLYG+LFML GAYTLAQNAHVRGDFLYSSM+PRTQA LDLVLY+VFFIPGIAALIYAG FA +SW+IAEHSNVTADGPPVY FK++IPIAGALVMLQG AEI+R V+CL+TGEWPSRL DVAE DV+ EQLA+S+YVDEESRKVAIERA +IDE ARQRGMG +L
Sbjct: 1 MNVQKLLHGIDGVSTWVGKAAAWLIVVLMAVVCIEVFKRYILNAPTAWIFDLDNMLYGTLFMLCGAYTLAQNAHVRGDFLYSSMRPRTQATLDLVLYVVFFIPGIAALIYAGTFFAADSWRIAEHSNVTADGPPVYHFKTIIPIAGALVMLQGIAEIMRAVICLKTGEWPSRLHDVAEIDVVGEQLANSQYVDEESRKVAIERAKEIDEVARQRGMGGDL 220
BLAST of mRNA_P-wetherbeei_contig15085.2.1 vs. uniprot
Match: W3RL97_9BRAD (Membrane protein n=1 Tax=Afipia sp. P52-10 TaxID=1429916 RepID=W3RL97_9BRAD) HSP 1 Score: 363 bits (931), Expect = 1.440e-125 Identity = 178/220 (80.91%), Postives = 196/220 (89.09%), Query Frame = 1
Query: 1 MYVQRFLHTIDGISTWVGKFAAWLIIVLMAVVCIEVFKRYILNTPTAWIFDGENMLYGSLFMLGGAYTLAQNAHVRGDFLYSSMQPRTQAALDLVLYIVFFIPGIAALIYAGFTFAVESWQIAEHSNVTADGPPVYQFKSVIPIAGALVMLQGFAEIVRCVVCLQTGEWPSRLADVAETDVIEEQLAHSEYVDEESRKVAIERAHKIDETARQRGMGSEL 660
M V+RFLH IDGISTWVGK AWL+IVLM VVCIEVFKRY+LN PTAWIFD +NMLYG+LFML GAYTLAQNAHVRGDF YSSM+PRTQA DLVLY VFF+PGIAALIYAG +A +SW+IAEHSNVTADGPPVY FK+VIPIAGALVMLQG AEI+RCVVCL+TGEWPSRL DVAE DV+ EQLA+SE+VDEESR++AIE A KIDE ARQRGMG EL
Sbjct: 1 MKVERFLHAIDGISTWVGKATAWLMIVLMLVVCIEVFKRYVLNAPTAWIFDAQNMLYGTLFMLAGAYTLAQNAHVRGDFFYSSMRPRTQATFDLVLYFVFFLPGIAALIYAGTDYAADSWRIAEHSNVTADGPPVYHFKTVIPIAGALVMLQGIAEIMRCVVCLKTGEWPSRLKDVAEIDVVGEQLANSEFVDEESRRIAIENAQKIDEAARQRGMGGEL 220 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15085.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15085.2.1 >prot_P-wetherbeei_contig15085.2.1 ID=prot_P-wetherbeei_contig15085.2.1|Name=mRNA_P-wetherbeei_contig15085.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=223bp MYVQRFLHTIDGISTWVGKFAAWLIIVLMAVVCIEVFKRYILNTPTAWIFback to top mRNA from alignment at P-wetherbeei_contig15085:921..1589+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15085.2.1 ID=mRNA_P-wetherbeei_contig15085.2.1|Name=mRNA_P-wetherbeei_contig15085.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=669bp|location=Sequence derived from alignment at P-wetherbeei_contig15085:921..1589+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15085:921..1589+ >mRNA_P-wetherbeei_contig15085.2.1 ID=mRNA_P-wetherbeei_contig15085.2.1|Name=mRNA_P-wetherbeei_contig15085.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=669bp|location=Sequence derived from alignment at P-wetherbeei_contig15085:921..1589+ (Phaeothamnion wetherbeei SAG_119_79)back to top |