mRNA_P-wetherbeei_contig15085.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15085.1.1
Unique NamemRNA_P-wetherbeei_contig15085.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15085.1.1 vs. uniprot
Match: A0A1Q7BA11_9PROT (Extracytoplasmic solute receptor protein n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7BA11_9PROT)

HSP 1 Score: 477 bits (1227), Expect = 2.650e-167
Identity = 233/272 (85.66%), Postives = 251/272 (92.28%), Query Frame = 1
Query:    1 HYGKQTALALWGSGPGYAMDANMLLSWHKYGGGKALLEKIFASIGANVVSFPYGPMPTQPLGWYKKPITKVDDFKGLKFRTVGISIDVFSGMGAAVNALPGGEIVAAMDRGLLDAAEFNNATSDRILGFADVSKVLMQQSYHQNAEQFEISFNKTKFDGLPAKMRAIIENAVEAASQDMSWKAIDRYSQDYIELQTKDNVKVYKTPDAILKRQLEIYDEVVKKKAAENPLFKEIVLSQLAFAKRATQWEQDTVVSRKMAFDHYFGRGAKSPI 816
            HYGKQTALALWGSGPGYAMDANMLL+WHKYGGGK LL K++ S+GANVVSFPYGPMPTQPLGWYKKPITK DDFKGLKFRTVGISIDVF  +GAAVNALPGGEIVAAMDRGL++AAEFNNA SDR LGFADVSK+ M QSYHQNAEQFEI+FNKTK+D LP K++AII NAVEAASQDM WKAIDRYS+DY+ELQTKDNVK YKTPD++LKRQLE++DEV KKKAAENPLFKEIV SQLAFAKRATQWEQDTVVSRKM FDHYFG  AK PI
Sbjct:  111 HYGKQTALALWGSGPGYAMDANMLLAWHKYGGGKELLNKLYTSVGANVVSFPYGPMPTQPLGWYKKPITKPDDFKGLKFRTVGISIDVFQSLGAAVNALPGGEIVAAMDRGLIEAAEFNNAASDRALGFADVSKICMLQSYHQNAEQFEITFNKTKYDALPDKLKAIIANAVEAASQDMQWKAIDRYSKDYVELQTKDNVKFYKTPDSVLKRQLEVFDEVAKKKAAENPLFKEIVESQLAFAKRATQWEQDTVVSRKMVFDHYFGPNAKKPI 382          
BLAST of mRNA_P-wetherbeei_contig15085.1.1 vs. uniprot
Match: A0A521MBH3_9HYPH (Extracytoplasmic solute receptor protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521MBH3_9HYPH)

HSP 1 Score: 475 bits (1223), Expect = 8.400e-167
Identity = 236/269 (87.73%), Postives = 251/269 (93.31%), Query Frame = 1
Query:    1 HYGKQTALALWGSGPGYAMDANMLLSWHKYGGGKALLEKIFASIGANVVSFPYGPMPTQPLGWYKKPITKVDDFKGLKFRTVGISIDVFSGMGAAVNALPGGEIVAAMDRGLLDAAEFNNATSDRILGFADVSKVLMQQSYHQNAEQFEISFNKTKFDGLPAKMRAIIENAVEAASQDMSWKAIDRYSQDYIELQTKDNVKVYKTPDAILKRQLEIYDEVVKKKAAENPLFKEIVLSQLAFAKRATQWEQDTVVSRKMAFDHYFGRGAK 807
            HYGKQTALALWGSGPGYAMDANMLL+WHKYGGGK LL K++ASIGANVVSFPYGPMPTQPLGW+KKPITKVDD KGLKFRTVGISIDVF GMGAAVNALPGGEIV+AMDRGLLDAAEFNNA+SDRILGFADVSKV M QSYHQNAEQFEI+FNKTK+D LP KM+AII NAVEAA QDM+WKAIDRYS+DY+ELQTKD VK YKTPD +LK QLEIYD VV+KKAAENP+FKEIV SQLAFAKRATQWEQDTVVSRKMAFDHYFG  AK
Sbjct:  103 HYGKQTALALWGSGPGYAMDANMLLAWHKYGGGKELLAKLYASIGANVVSFPYGPMPTQPLGWFKKPITKVDDLKGLKFRTVGISIDVFQGMGAAVNALPGGEIVSAMDRGLLDAAEFNNASSDRILGFADVSKVCMLQSYHQNAEQFEITFNKTKYDALPDKMKAIISNAVEAAGQDMAWKAIDRYSKDYVELQTKDKVKFYKTPDPVLKAQLEIYDSVVQKKAAENPMFKEIVESQLAFAKRATQWEQDTVVSRKMAFDHYFGPNAK 371          
BLAST of mRNA_P-wetherbeei_contig15085.1.1 vs. uniprot
Match: A0A4D7AV41_9HYPH (Extracytoplasmic solute receptor protein n=2 Tax=Phreatobacter TaxID=1632780 RepID=A0A4D7AV41_9HYPH)

HSP 1 Score: 468 bits (1203), Expect = 9.950e-164
Identity = 229/265 (86.42%), Postives = 250/265 (94.34%), Query Frame = 1
Query:    1 HYGKQTALALWGSGPGYAMDANMLLSWHKYGGGKALLEKIFASIGANVVSFPYGPMPTQPLGWYKKPITKVDDFKGLKFRTVGISIDVFSGMGAAVNALPGGEIVAAMDRGLLDAAEFNNATSDRILGFADVSKVLMQQSYHQNAEQFEISFNKTKFDGLPAKMRAIIENAVEAASQDMSWKAIDRYSQDYIELQTKDNVKVYKTPDAILKRQLEIYDEVVKKKAAENPLFKEIVLSQLAFAKRATQWEQDTVVSRKMAFDHYFG 795
            HYGKQTALALWGSGPGYAMDANMLL+WHKYGGGK LL K++ASIGANVVSFPYGPMPTQPLGW+KKPIT VDD KGLKFRTVGISIDVFS MGAAVNALPGGEIVAAMDRGLLDAAEFNNA+SDR+LGFADVSKV M QSYHQNAEQFEISFNKTKFD LP ++++IIENAVEAAS DMSWKAIDRYSQDYIELQTKD V+ +KTPDAIL+RQL++YDEVV KK+AENPLFKEI+ SQ+AFA+R TQWEQDTVVSR+MA+DHYFG
Sbjct:  105 HYGKQTALALWGSGPGYAMDANMLLAWHKYGGGKQLLAKLYASIGANVVSFPYGPMPTQPLGWFKKPITSVDDLKGLKFRTVGISIDVFSAMGAAVNALPGGEIVAAMDRGLLDAAEFNNASSDRVLGFADVSKVCMLQSYHQNAEQFEISFNKTKFDALPDRIKSIIENAVEAASSDMSWKAIDRYSQDYIELQTKDRVRFFKTPDAILRRQLQVYDEVVAKKSAENPLFKEIIESQIAFARRTTQWEQDTVVSRRMAYDHYFG 369          
BLAST of mRNA_P-wetherbeei_contig15085.1.1 vs. uniprot
Match: A0A1B2EE43_9HYPH (Extracytoplasmic solute receptor protein n=4 Tax=Microvirga TaxID=186650 RepID=A0A1B2EE43_9HYPH)

HSP 1 Score: 468 bits (1203), Expect = 1.150e-163
Identity = 227/268 (84.70%), Postives = 254/268 (94.78%), Query Frame = 1
Query:    1 HYGKQTALALWGSGPGYAMDANMLLSWHKYGGGKALLEKIFASIGANVVSFPYGPMPTQPLGWYKKPITKVDDFKGLKFRTVGISIDVFSGMGAAVNALPGGEIVAAMDRGLLDAAEFNNATSDRILGFADVSKVLMQQSYHQNAEQFEISFNKTKFDGLPAKMRAIIENAVEAASQDMSWKAIDRYSQDYIELQTKDNVKVYKTPDAILKRQLEIYDEVVKKKAAENPLFKEIVLSQLAFAKRATQWEQDTVVSRKMAFDHYFGRGA 804
            HYGKQTALALWGSGPG+AMDANML++WH+YGGGK LLEK++ASIGANVVSFPYGPMPTQPLGW+KKP+TK++D  GLKFRTVGISIDVF+GMGAAVNALPGGEIV+AMDRGLLDAAEFNNA+SDR LGFADVSKV M QSYHQNAEQFEI FNKTK+DGLP KM+AII NAV+AASQDMSWKAIDRYS+DY+ELQTKDNVK YKTPDAIL++QLE+YD+VVKKKA ENPLFKEI+ SQLAFA+RAT+WEQDTVV+R+MAFDHYFG  A
Sbjct:  109 HYGKQTALALWGSGPGFAMDANMLMAWHRYGGGKELLEKLYASIGANVVSFPYGPMPTQPLGWFKKPVTKMEDMAGLKFRTVGISIDVFTGMGAAVNALPGGEIVSAMDRGLLDAAEFNNASSDRALGFADVSKVCMLQSYHQNAEQFEIMFNKTKYDGLPEKMKAIIANAVDAASQDMSWKAIDRYSKDYVELQTKDNVKFYKTPDAILRKQLEVYDDVVKKKAGENPLFKEILESQLAFAQRATRWEQDTVVNRRMAFDHYFGPNA 376          
BLAST of mRNA_P-wetherbeei_contig15085.1.1 vs. uniprot
Match: A0A6A7M739_9PROT (Extracytoplasmic solute receptor protein n=5 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A6A7M739_9PROT)

HSP 1 Score: 466 bits (1199), Expect = 4.190e-163
Identity = 230/269 (85.50%), Postives = 249/269 (92.57%), Query Frame = 1
Query:    1 HYGKQTALALWGSGPGYAMDANMLLSWHKYGGGKALLEKIFASIGANVVSFPYGPMPTQPLGWYKKPITKVDDFKGLKFRTVGISIDVFSGMGAAVNALPGGEIVAAMDRGLLDAAEFNNATSDRILGFADVSKVLMQQSYHQNAEQFEISFNKTKFDGLPAKMRAIIENAVEAASQDMSWKAIDRYSQDYIELQTKDNVKVYKTPDAILKRQLEIYDEVVKKKAAENPLFKEIVLSQLAFAKRATQWEQDTVVSRKMAFDHYFGRGAK 807
            HYGKQTALALWGSGPGYAMDANMLL+WHKYGGGK LLEK++ASIGANVVSFPYGPMPTQPLGW+KKP+TKV+D +GLKFRTVGISIDVF GMGAAVNALPGGEIVAA+DRGLLDAAEFNNA+SDRILGFADVSKV M QSYHQNAEQFEI FNK KF+ LP KM+AII N VEAASQDM+WKAIDRYS+DY+ELQTKD VK YKTPDA+LKRQLEIYD+VV KK+AEN +FKEI  SQ+AFAKRATQWEQDTVVSRKM FDHYFG  AK
Sbjct:  106 HYGKQTALALWGSGPGYAMDANMLLAWHKYGGGKELLEKLYASIGANVVSFPYGPMPTQPLGWFKKPVTKVEDLRGLKFRTVGISIDVFQGMGAAVNALPGGEIVAALDRGLLDAAEFNNASSDRILGFADVSKVCMLQSYHQNAEQFEIMFNKDKFNALPDKMKAIIANGVEAASQDMAWKAIDRYSKDYVELQTKDKVKFYKTPDAVLKRQLEIYDDVVAKKSAENAMFKEIAQSQIAFAKRATQWEQDTVVSRKMVFDHYFGPQAK 374          
BLAST of mRNA_P-wetherbeei_contig15085.1.1 vs. uniprot
Match: A0A0S3PS39_9BRAD (Extracytoplasmic solute receptor protein n=1 Tax=Variibacter gotjawalensis TaxID=1333996 RepID=A0A0S3PS39_9BRAD)

HSP 1 Score: 466 bits (1198), Expect = 6.160e-163
Identity = 226/272 (83.09%), Postives = 252/272 (92.65%), Query Frame = 1
Query:    1 HYGKQTALALWGSGPGYAMDANMLLSWHKYGGGKALLEKIFASIGANVVSFPYGPMPTQPLGWYKKPITKVDDFKGLKFRTVGISIDVFSGMGAAVNALPGGEIVAAMDRGLLDAAEFNNATSDRILGFADVSKVLMQQSYHQNAEQFEISFNKTKFDGLPAKMRAIIENAVEAASQDMSWKAIDRYSQDYIELQTKDNVKVYKTPDAILKRQLEIYDEVVKKKAAENPLFKEIVLSQLAFAKRATQWEQDTVVSRKMAFDHYFGRGAKSPI 816
            HYGK TALALWGSGPGYAMDANML++WHKYGGGKALLE+++ASIGANVVSFPYGPMPTQPLGW+KKPITKVDD KGLKFRTVGISIDVF+G+GA+VNALPGGEIVAAMDRGLLDAAEFNNA+SDR+LGF DVSKV M QSYHQNAEQFE+ FNK K++GLP K+RAII NA EAA QDM WKAIDRYS DY+E+Q KD VK YKTPDA+LKRQLE++DEV KKKA+E+PLFK+IV SQLAFAKRAT+WEQDT+VSR+MAFDHYFG  AKSPI
Sbjct:  108 HYGKNTALALWGSGPGYAMDANMLMAWHKYGGGKALLEELYASIGANVVSFPYGPMPTQPLGWFKKPITKVDDLKGLKFRTVGISIDVFTGLGASVNALPGGEIVAAMDRGLLDAAEFNNASSDRVLGFPDVSKVCMLQSYHQNAEQFEVMFNKDKYNGLPEKIRAIIANATEAAGQDMQWKAIDRYSTDYLEMQQKDGVKFYKTPDAVLKRQLEVFDEVAKKKASESPLFKKIVESQLAFAKRATRWEQDTLVSRRMAFDHYFGANAKSPI 379          
BLAST of mRNA_P-wetherbeei_contig15085.1.1 vs. uniprot
Match: UPI000B4B5400 (TRAP transporter substrate-binding protein n=1 Tax=Rhodomicrobium TaxID=1068 RepID=UPI000B4B5400)

HSP 1 Score: 463 bits (1191), Expect = 7.670e-162
Identity = 229/272 (84.19%), Postives = 247/272 (90.81%), Query Frame = 1
Query:    1 HYGKQTALALWGSGPGYAMDANMLLSWHKYGGGKALLEKIFASIGANVVSFPYGPMPTQPLGWYKKPITKVDDFKGLKFRTVGISIDVFSGMGAAVNALPGGEIVAAMDRGLLDAAEFNNATSDRILGFADVSKVLMQQSYHQNAEQFEISFNKTKFDGLPAKMRAIIENAVEAASQDMSWKAIDRYSQDYIELQTKDNVKVYKTPDAILKRQLEIYDEVVKKKAAENPLFKEIVLSQLAFAKRATQWEQDTVVSRKMAFDHYFGRGAKSPI 816
            HYGKQTALALWGSGP + MDANMLLSWHKYGGGK LL K++ SIGANVVSFPYGPMPTQPLGW+KKP+  VDDFKGLKFRTVGISIDVF+G+GAAVNALPGGEIV+AMDRGLLDAAEFNNA+SD+ LGF DVSKV M QSYHQNAEQFEI+FNKTK+DGLP KMRAII NAVEAAS DMSWKAIDRYS DYI+LQTK NVK YKTPDAILK+QLE YDEV KKKA ENP+FKEIV SQLAFAKR T+WE DTVVSRKMAFDHY+G  AK+PI
Sbjct:  110 HYGKQTALALWGSGPAFGMDANMLLSWHKYGGGKELLAKLYESIGANVVSFPYGPMPTQPLGWFKKPMASVDDFKGLKFRTVGISIDVFTGLGAAVNALPGGEIVSAMDRGLLDAAEFNNASSDKALGFPDVSKVCMLQSYHQNAEQFEITFNKTKYDGLPEKMRAIIANAVEAASADMSWKAIDRYSTDYIDLQTKSNVKFYKTPDAILKKQLEAYDEVAKKKAGENPIFKEIVESQLAFAKRVTRWENDTVVSRKMAFDHYWGPNAKAPI 381          
BLAST of mRNA_P-wetherbeei_contig15085.1.1 vs. uniprot
Match: A0A0R3MAY5_9BRAD (Extracytoplasmic solute receptor protein n=4 Tax=Bradyrhizobium TaxID=374 RepID=A0A0R3MAY5_9BRAD)

HSP 1 Score: 462 bits (1189), Expect = 1.390e-161
Identity = 227/268 (84.70%), Postives = 248/268 (92.54%), Query Frame = 1
Query:    1 HYGKQTALALWGSGPGYAMDANMLLSWHKYGGGKALLEKIFASIGANVVSFPYGPMPTQPLGWYKKPITKVDDFKGLKFRTVGISIDVFSGMGAAVNALPGGEIVAAMDRGLLDAAEFNNATSDRILGFADVSKVLMQQSYHQNAEQFEISFNKTKFDGLPAKMRAIIENAVEAASQDMSWKAIDRYSQDYIELQTKDNVKVYKTPDAILKRQLEIYDEVVKKKAAENPLFKEIVLSQLAFAKRATQWEQDTVVSRKMAFDHYFGRGA 804
            HYGKQTALALWGSGPG+AMDANMLL+WH+YGGGK LLEK++ASIGANVVSFPYGPMPTQP GW+KKPI K DD KGLKFRTVGISIDV+SGMGAAVNALPGGEIV+AMDRGLLDAAEFNNATSDR+LGF DVSKV M QSYHQNAEQ EI FNK K++GLP KM+AII NAV+AAS DMSWKAIDRYS+DY+ELQTKDNVK YKTPDAILK+QLEIYDEV KKK+AENPLFKEIV SQ+ FAKRATQWEQDTVV+R+MA+DHYFG  A
Sbjct:  106 HYGKQTALALWGSGPGFAMDANMLLAWHRYGGGKELLEKLYASIGANVVSFPYGPMPTQPFGWFKKPIAKADDVKGLKFRTVGISIDVYSGMGAAVNALPGGEIVSAMDRGLLDAAEFNNATSDRVLGFPDVSKVCMLQSYHQNAEQLEIMFNKDKYNGLPDKMKAIIANAVDAASADMSWKAIDRYSKDYVELQTKDNVKFYKTPDAILKQQLEIYDEVAKKKSAENPLFKEIVQSQINFAKRATQWEQDTVVNRRMAYDHYFGANA 373          
BLAST of mRNA_P-wetherbeei_contig15085.1.1 vs. uniprot
Match: UPI001BADBB0C (twin-arginine translocation signal domain-containing protein n=10 Tax=Bradyrhizobium TaxID=374 RepID=UPI001BADBB0C)

HSP 1 Score: 462 bits (1189), Expect = 1.390e-161
Identity = 224/269 (83.27%), Postives = 250/269 (92.94%), Query Frame = 1
Query:    1 HYGKQTALALWGSGPGYAMDANMLLSWHKYGGGKALLEKIFASIGANVVSFPYGPMPTQPLGWYKKPITKVDDFKGLKFRTVGISIDVFSGMGAAVNALPGGEIVAAMDRGLLDAAEFNNATSDRILGFADVSKVLMQQSYHQNAEQFEISFNKTKFDGLPAKMRAIIENAVEAASQDMSWKAIDRYSQDYIELQTKDNVKVYKTPDAILKRQLEIYDEVVKKKAAENPLFKEIVLSQLAFAKRATQWEQDTVVSRKMAFDHYFGRGAK 807
            HYGKQ ALALWGSGPGYAMDANMLL+WHKYGGGK LL K++ASIGANVVSFPYGPMPTQPLGW+KKP+TK DD KG+KFRTVGISIDVFSGMGAAVNALPGGEIVAA+DRGLLDAAEFNNATSDRILGF DVSK+ M QSYHQNAEQFEI FNK K+D LPAK+RAI++NA EAA QDM+WKAIDRYS+DY E+QTKDNVK YKTPD++L+ QL+IYD+VV+KK+AENPLFKEIV SQLAFAKRATQWEQDTVV+R+MA++HYFG  AK
Sbjct:  107 HYGKQNALALWGSGPGYAMDANMLLAWHKYGGGKELLAKLYASIGANVVSFPYGPMPTQPLGWFKKPVTKADDMKGVKFRTVGISIDVFSGMGAAVNALPGGEIVAALDRGLLDAAEFNNATSDRILGFPDVSKICMLQSYHQNAEQFEIMFNKDKYDALPAKIRAILDNAAEAAGQDMAWKAIDRYSKDYAEMQTKDNVKFYKTPDSVLQAQLDIYDQVVEKKSAENPLFKEIVASQLAFAKRATQWEQDTVVNRRMAYNHYFGPNAK 375          
BLAST of mRNA_P-wetherbeei_contig15085.1.1 vs. uniprot
Match: A0A023XS54_BRAJP (Extracytoplasmic solute receptor protein n=14 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A023XS54_BRAJP)

HSP 1 Score: 461 bits (1185), Expect = 5.640e-161
Identity = 224/269 (83.27%), Postives = 250/269 (92.94%), Query Frame = 1
Query:    1 HYGKQTALALWGSGPGYAMDANMLLSWHKYGGGKALLEKIFASIGANVVSFPYGPMPTQPLGWYKKPITKVDDFKGLKFRTVGISIDVFSGMGAAVNALPGGEIVAAMDRGLLDAAEFNNATSDRILGFADVSKVLMQQSYHQNAEQFEISFNKTKFDGLPAKMRAIIENAVEAASQDMSWKAIDRYSQDYIELQTKDNVKVYKTPDAILKRQLEIYDEVVKKKAAENPLFKEIVLSQLAFAKRATQWEQDTVVSRKMAFDHYFGRGAK 807
            HYGKQ ALALWGSGPGYAMDANMLL+WH+YGGG+ LLEK++ASIGANVVSFPYGPMPTQPLGWYKKP+TKV+DF+GLKFRTVGISIDVF+G+GAAVNALPGGEIV+AMDRGLLDAAEFNNATSDR+LGF DVSK+ M QSYHQNAEQFEI FNKTKFD LP KMRAII NAV+AA QDM+WKAIDRYS+DY ELQTKD VK YKTPD IL++QLE++D+V +KK+AENPLFKEI+ SQLAFAKRATQWEQDTVVSR+MA+ HYFG  AK
Sbjct:  107 HYGKQNALALWGSGPGYAMDANMLLAWHRYGGGRELLEKLYASIGANVVSFPYGPMPTQPLGWYKKPMTKVEDFQGLKFRTVGISIDVFTGLGAAVNALPGGEIVSAMDRGLLDAAEFNNATSDRVLGFPDVSKICMLQSYHQNAEQFEILFNKTKFDALPEKMRAIIANAVDAAGQDMAWKAIDRYSRDYEELQTKDKVKFYKTPDTILQKQLEVFDQVAEKKSAENPLFKEIIESQLAFAKRATQWEQDTVVSRRMAYTHYFGPNAK 375          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15085.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Q7BA11_9PROT2.650e-16785.66Extracytoplasmic solute receptor protein n=1 Tax=A... [more]
A0A521MBH3_9HYPH8.400e-16787.73Extracytoplasmic solute receptor protein n=1 Tax=R... [more]
A0A4D7AV41_9HYPH9.950e-16486.42Extracytoplasmic solute receptor protein n=2 Tax=P... [more]
A0A1B2EE43_9HYPH1.150e-16384.70Extracytoplasmic solute receptor protein n=4 Tax=M... [more]
A0A6A7M739_9PROT4.190e-16385.50Extracytoplasmic solute receptor protein n=5 Tax=A... [more]
A0A0S3PS39_9BRAD6.160e-16383.09Extracytoplasmic solute receptor protein n=1 Tax=V... [more]
UPI000B4B54007.670e-16284.19TRAP transporter substrate-binding protein n=1 Tax... [more]
A0A0R3MAY5_9BRAD1.390e-16184.70Extracytoplasmic solute receptor protein n=4 Tax=B... [more]
UPI001BADBB0C1.390e-16183.27twin-arginine translocation signal domain-containi... [more]
A0A023XS54_BRAJP5.640e-16183.27Extracytoplasmic solute receptor protein n=14 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15085contigP-wetherbeei_contig15085:1..819 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog196490.AUEZ01000010_gene2129
PFAMsDctP,TAT_signal
Model size819
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue8.92e-166
EggNOG OGsCOG4663@1|root,COG4663@2|Bacteria,1MUXI@1224|Proteobacteria,2TQVW@28211|Alphaproteobacteria,3JWB9@41294|Bradyrhizobiaceae
DescriptionPart of the tripartite ATP-independent periplasmic (TRAP) transport system
Cds size819
COG categoryQ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186044.090464-CDS-P-wetherbeei_contig15085:0..8191683186044.090464-CDS-P-wetherbeei_contig15085:0..819Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15085 1..819 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15085.1.1prot_P-wetherbeei_contig15085.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15085 1..819 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15085.1.1

>prot_P-wetherbeei_contig15085.1.1 ID=prot_P-wetherbeei_contig15085.1.1|Name=mRNA_P-wetherbeei_contig15085.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=273bp
HYGKQTALALWGSGPGYAMDANMLLSWHKYGGGKALLEKIFASIGANVVS
FPYGPMPTQPLGWYKKPITKVDDFKGLKFRTVGISIDVFSGMGAAVNALP
GGEIVAAMDRGLLDAAEFNNATSDRILGFADVSKVLMQQSYHQNAEQFEI
SFNKTKFDGLPAKMRAIIENAVEAASQDMSWKAIDRYSQDYIELQTKDNV
KVYKTPDAILKRQLEIYDEVVKKKAAENPLFKEIVLSQLAFAKRATQWEQ
DTVVSRKMAFDHYFGRGAKSPI*
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mRNA from alignment at P-wetherbeei_contig15085:1..819+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15085.1.1 ID=mRNA_P-wetherbeei_contig15085.1.1|Name=mRNA_P-wetherbeei_contig15085.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=819bp|location=Sequence derived from alignment at P-wetherbeei_contig15085:1..819+ (Phaeothamnion wetherbeei SAG_119_79)
CACTACGGCAAGCAGACCGCGCTGGCGCTGTGGGGCTCGGGCCCGGGCTA CGCGATGGACGCCAACATGCTGCTGTCCTGGCACAAGTACGGCGGCGGCA AGGCGCTGCTGGAAAAGATCTTCGCTTCGATTGGTGCCAACGTCGTCTCG TTCCCGTACGGGCCAATGCCGACCCAGCCGCTCGGCTGGTACAAGAAGCC GATCACCAAGGTCGACGACTTCAAGGGCCTCAAGTTCCGCACCGTCGGCA TCTCGATTGACGTGTTCAGCGGCATGGGCGCCGCGGTGAACGCGCTGCCG GGCGGCGAAATCGTCGCGGCGATGGACCGCGGTCTGCTCGACGCGGCCGA GTTCAACAACGCCACGTCGGACCGCATCCTCGGCTTTGCCGACGTCTCCA AGGTTCTGATGCAGCAGAGCTATCATCAGAACGCCGAGCAGTTCGAAATT TCGTTCAACAAGACGAAATTCGATGGTCTGCCGGCGAAGATGAGGGCGAT CATCGAGAACGCGGTCGAGGCGGCCTCGCAGGATATGTCCTGGAAGGCGA TCGACCGCTACTCGCAGGACTACATCGAGCTGCAGACCAAGGACAACGTC AAGGTGTACAAGACGCCGGACGCGATCCTCAAGCGCCAGCTCGAAATCTA CGATGAGGTGGTGAAGAAGAAGGCGGCGGAAAATCCGCTGTTCAAGGAGA TCGTCCTGTCGCAGCTTGCGTTCGCCAAGCGCGCCACGCAGTGGGAGCAG GACACCGTCGTCAGCCGCAAGATGGCGTTCGATCACTACTTCGGACGGGG CGCAAAGAGCCCGATCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15085:1..819+

>mRNA_P-wetherbeei_contig15085.1.1 ID=mRNA_P-wetherbeei_contig15085.1.1|Name=mRNA_P-wetherbeei_contig15085.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=819bp|location=Sequence derived from alignment at P-wetherbeei_contig15085:1..819+ (Phaeothamnion wetherbeei SAG_119_79)
CACTACGGCAAGCAGACCGCGCTGGCGCTGTGGGGCTCGGGCCCGGGCTA
CGCGATGGACGCCAACATGCTGCTGTCCTGGCACAAGTACGGCGGCGGCA
AGGCGCTGCTGGAAAAGATCTTCGCTTCGATTGGTGCCAACGTCGTCTCG
TTCCCGTACGGGCCAATGCCGACCCAGCCGCTCGGCTGGTACAAGAAGCC
GATCACCAAGGTCGACGACTTCAAGGGCCTCAAGTTCCGCACCGTCGGCA
TCTCGATTGACGTGTTCAGCGGCATGGGCGCCGCGGTGAACGCGCTGCCG
GGCGGCGAAATCGTCGCGGCGATGGACCGCGGTCTGCTCGACGCGGCCGA
GTTCAACAACGCCACGTCGGACCGCATCCTCGGCTTTGCCGACGTCTCCA
AGGTTCTGATGCAGCAGAGCTATCATCAGAACGCCGAGCAGTTCGAAATT
TCGTTCAACAAGACGAAATTCGATGGTCTGCCGGCGAAGATGAGGGCGAT
CATCGAGAACGCGGTCGAGGCGGCCTCGCAGGATATGTCCTGGAAGGCGA
TCGACCGCTACTCGCAGGACTACATCGAGCTGCAGACCAAGGACAACGTC
AAGGTGTACAAGACGCCGGACGCGATCCTCAAGCGCCAGCTCGAAATCTA
CGATGAGGTGGTGAAGAAGAAGGCGGCGGAAAATCCGCTGTTCAAGGAGA
TCGTCCTGTCGCAGCTTGCGTTCGCCAAGCGCGCCACGCAGTGGGAGCAG
GACACCGTCGTCAGCCGCAAGATGGCGTTCGATCACTACTTCGGACGGGG
CGCAAAGAGCCCGATCTGA
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