mRNA_P-wetherbeei_contig15053.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15053.1.1
Unique NamemRNA_P-wetherbeei_contig15053.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15053.1.1 vs. uniprot
Match: A0A1F4B3S5_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4B3S5_9PROT)

HSP 1 Score: 234 bits (598), Expect = 1.590e-74
Identity = 117/131 (89.31%), Postives = 121/131 (92.37%), Query Frame = 1
Query:    4 QLAESIVSGGGEDLLKTHRREVVVVFLDLRGFTAFTDTGEPEEVMGVLGEYHKVMGQLIMTHEGTLERFAGDGLMIFFNDPIKLENLTANAVKMSLAMQENFAPLRAAWKKRGFELDLGIGIAQGYATLGA 396
            QLAESIVSGGGE+LLKTHRREVVVVFLDLRGFTAFTD  EPEEVMGVLGEYH+VMGQLIM HEGTLERF GDGLMIFFNDPIKLEN  ANAV+M+L MQ  FAPLRA WKKRGFELDLGIGIAQGYATLGA
Sbjct:  164 QLAESIVSGGGEELLKTHRREVVVVFLDLRGFTAFTDGSEPEEVMGVLGEYHRVMGQLIMAHEGTLERFVGDGLMIFFNDPIKLENPAANAVRMALEMQAQFAPLRAGWKKRGFELDLGIGIAQGYATLGA 294          
BLAST of mRNA_P-wetherbeei_contig15053.1.1 vs. uniprot
Match: A0A1Y5FGG7_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium 54_18_T64 TaxID=1856296 RepID=A0A1Y5FGG7_9GAMM)

HSP 1 Score: 219 bits (557), Expect = 1.890e-65
Identity = 106/131 (80.92%), Postives = 121/131 (92.37%), Query Frame = 1
Query:    4 QLAESIVSGGGEDLLKTHRREVVVVFLDLRGFTAFTDTGEPEEVMGVLGEYHKVMGQLIMTHEGTLERFAGDGLMIFFNDPIKLENLTANAVKMSLAMQENFAPLRAAWKKRGFELDLGIGIAQGYATLGA 396
            QLAESI+SGGGE+LLKTHRREVVVVFLDL GFTAFTD+ EPEEVM VLGEYH+VMGQL++ HEGTLERFAGDGLMIFFNDP++L+N   +AVKM+LAMQ+ F PLRAAWK+RG++LDL IGIAQGYATLGA
Sbjct:  460 QLAESILSGGGEELLKTHRREVVVVFLDLCGFTAFTDSFEPEEVMAVLGEYHRVMGQLVVAHEGTLERFAGDGLMIFFNDPVELDNPAESAVKMALAMQQQFVPLRAAWKERGYDLDLSIGIAQGYATLGA 590          
BLAST of mRNA_P-wetherbeei_contig15053.1.1 vs. uniprot
Match: A0A536U6N5_9PROT (Response regulator n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536U6N5_9PROT)

HSP 1 Score: 196 bits (497), Expect = 3.170e-59
Identity = 91/131 (69.47%), Postives = 111/131 (84.73%), Query Frame = 1
Query:    4 QLAESIVSGGGEDLLKTHRREVVVVFLDLRGFTAFTDTGEPEEVMGVLGEYHKVMGQLIMTHEGTLERFAGDGLMIFFNDPIKLENLTANAVKMSLAMQENFAPLRAAWKKRGFELDLGIGIAQGYATLGA 396
            Q+AE IVSGG E+LL+ HRREV VVFLDLRGFT+FT+T EPEEVMGVL EYH  +G+L++ HEGT+E FAGDG+MIFFNDPI L+N  A+A +MSL++Q +F  LR  W+KRG+ LDLGIG+AQGYATLGA
Sbjct:  169 QIAELIVSGGAEELLRPHRREVTVVFLDLRGFTSFTETAEPEEVMGVLSEYHATVGRLVVAHEGTIEHFAGDGMMIFFNDPITLDNAAASAARMSLSLQADFVSLRGGWRKRGYTLDLGIGLAQGYATLGA 299          
BLAST of mRNA_P-wetherbeei_contig15053.1.1 vs. uniprot
Match: A0A1G0KC09_9GAMM (Guanylate cyclase n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_61_13 TaxID=1798300 RepID=A0A1G0KC09_9GAMM)

HSP 1 Score: 191 bits (485), Expect = 1.770e-57
Identity = 90/130 (69.23%), Postives = 110/130 (84.62%), Query Frame = 1
Query:    7 LAESIVSGGGEDLLKTHRREVVVVFLDLRGFTAFTDTGEPEEVMGVLGEYHKVMGQLIMTHEGTLERFAGDGLMIFFNDPIKLENLTANAVKMSLAMQENFAPLRAAWKKRGFELDLGIGIAQGYATLGA 396
            +A+ I++GG +D LK+ RREV VVFLDLRGFTAFT+T +PEEVMGVL EYHK MG+LIM HEGTLERFAGDG+MIFFNDP+ ++N +ANA +M+  MQE+F  L   WKKRG+ LD+GIGIAQGYAT+GA
Sbjct:  168 VADLILAGGADDPLKSRRREVTVVFLDLRGFTAFTETADPEEVMGVLREYHKAMGELIMKHEGTLERFAGDGIMIFFNDPVVVDNPSANAARMAFEMQESFKRLSQGWKKRGYSLDMGIGIAQGYATIGA 297          
BLAST of mRNA_P-wetherbeei_contig15053.1.1 vs. uniprot
Match: A0A2V6SDY1_9BACT (Adenylate/guanylate cyclase domain-containing response regulator (Fragment) n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6SDY1_9BACT)

HSP 1 Score: 187 bits (475), Expect = 2.260e-57
Identity = 88/131 (67.18%), Postives = 108/131 (82.44%), Query Frame = 1
Query:    4 QLAESIVSGGGEDLLKTHRREVVVVFLDLRGFTAFTDTGEPEEVMGVLGEYHKVMGQLIMTHEGTLERFAGDGLMIFFNDPIKLENLTANAVKMSLAMQENFAPLRAAWKKRGFELDLGIGIAQGYATLGA 396
            QLAE IV+GG ED LKTHRR+V VVFLDLRG+TAFT+T EPEEVMGVL EYH  MG LI+ HEGTLERFAGDG+MIFFNDP+ + N    A++M+LAM++    L A W++RG+ L++G+GIAQGYAT+GA
Sbjct:   49 QLAELIVAGGAEDPLKTHRRDVTVVFLDLRGYTAFTETAEPEEVMGVLREYHAEMGTLILAHEGTLERFAGDGMMIFFNDPVPVPNPAERAIRMALAMRDRMEHLAALWRRRGYNLEIGVGIAQGYATIGA 179          
BLAST of mRNA_P-wetherbeei_contig15053.1.1 vs. uniprot
Match: A0A1F9KXD2_9DELT (Guanylate cyclase n=1 Tax=Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19 TaxID=1797894 RepID=A0A1F9KXD2_9DELT)

HSP 1 Score: 191 bits (484), Expect = 2.700e-57
Identity = 90/131 (68.70%), Postives = 108/131 (82.44%), Query Frame = 1
Query:    4 QLAESIVSGGGEDLLKTHRREVVVVFLDLRGFTAFTDTGEPEEVMGVLGEYHKVMGQLIMTHEGTLERFAGDGLMIFFNDPIKLENLTANAVKMSLAMQENFAPLRAAWKKRGFELDLGIGIAQGYATLGA 396
            QLAE IV+GG ED LKTHRREV VVFLDLRGFTAF +T EPEEVMGVL EYH  MG+LI+ HEGTLERF GDG+MIFFNDP+ + N    A++M+LAM+E+ A L+  W+K G++LD G+GIAQGYAT+GA
Sbjct:  169 QLAEMIVAGGAEDPLKTHRREVTVVFLDLRGFTAFAETAEPEEVMGVLREYHTEMGKLILAHEGTLERFTGDGMMIFFNDPVPVSNPAERAIRMALAMRESVAELKVKWRKLGYDLDFGVGIAQGYATIGA 299          
BLAST of mRNA_P-wetherbeei_contig15053.1.1 vs. uniprot
Match: A0A534MZU3_9DELT (Response regulator (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534MZU3_9DELT)

HSP 1 Score: 189 bits (479), Expect = 3.080e-57
Identity = 88/130 (67.69%), Postives = 109/130 (83.85%), Query Frame = 1
Query:    4 QLAESIVSGGGEDLLKTHRREVVVVFLDLRGFTAFTDTGEPEEVMGVLGEYHKVMGQLIMTHEGTLERFAGDGLMIFFNDPIKLENLTANAVKMSLAMQENFAPLRAAWKKRGFELDLGIGIAQGYATLG 393
            QLAE IV+GG +D LKTHRRE+ VVFLDLRGFTAF ++ EPEEVMGVL +YH  MG+LI+ HEGTLERFAGDG+MIFFNDP+ ++N    A++M+LAM+E  A L A W+KRG+ELD G+GIA+GYAT+G
Sbjct:  109 QLAELIVTGGADDPLKTHRREITVVFLDLRGFTAFAESSEPEEVMGVLRQYHGEMGKLILEHEGTLERFAGDGMMIFFNDPVPVQNPAERAIRMALAMRERVAELSAQWRKRGYELDFGVGIAEGYATIG 238          
BLAST of mRNA_P-wetherbeei_contig15053.1.1 vs. uniprot
Match: A0A2V6V0I2_9BACT (Adenylate/guanylate cyclase domain-containing response regulator (Fragment) n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6V0I2_9BACT)

HSP 1 Score: 187 bits (474), Expect = 3.720e-57
Identity = 88/131 (67.18%), Postives = 106/131 (80.92%), Query Frame = 1
Query:    4 QLAESIVSGGGEDLLKTHRREVVVVFLDLRGFTAFTDTGEPEEVMGVLGEYHKVMGQLIMTHEGTLERFAGDGLMIFFNDPIKLENLTANAVKMSLAMQENFAPLRAAWKKRGFELDLGIGIAQGYATLGA 396
            QLAE IV+GG ED LK+HRR++ VVFLDLRGFTAF +T EPEEVMGVL EYH  MG+LI+ HEGTLERFAGDG+M+FFNDP+ + N    A++M+LAM+E    L  AW+KRGF LD G G+AQGYAT+GA
Sbjct:   55 QLAELIVAGGAEDPLKSHRRDITVVFLDLRGFTAFAETAEPEEVMGVLREYHAEMGRLILAHEGTLERFAGDGIMVFFNDPVPVPNPAERAIRMTLAMRERVTDLLTAWRKRGFALDFGAGLAQGYATIGA 185          
BLAST of mRNA_P-wetherbeei_contig15053.1.1 vs. uniprot
Match: A0A1F4DZN9_9PROT (Guanylate cyclase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DZN9_9PROT)

HSP 1 Score: 187 bits (476), Expect = 3.960e-56
Identity = 88/131 (67.18%), Postives = 112/131 (85.50%), Query Frame = 1
Query:    4 QLAESIVSGGGEDLLKTHRREVVVVFLDLRGFTAFTDTGEPEEVMGVLGEYHKVMGQLIMTHEGTLERFAGDGLMIFFNDPIKLENLTANAVKMSLAMQENFAPLRAAWKKRGFELDLGIGIAQGYATLGA 396
            Q+A+ I++GG  D L++HRRE+ VVFLDLRGFTAFT+T +PEEVMGVL EYH  MG+LIM H+GTLERFAGDG+MIFFNDP++L+N  A+AV+M++ MQ+ FA L   W+KRG++L +GIGIAQGYATLGA
Sbjct:  167 QVADLILAGGTGDPLRSHRREITVVFLDLRGFTAFTETADPEEVMGVLREYHAEMGRLIMAHQGTLERFAGDGIMIFFNDPVELDNPAAHAVRMAVEMQQRFAVLDTGWQKRGYDLHMGIGIAQGYATLGA 297          
BLAST of mRNA_P-wetherbeei_contig15053.1.1 vs. uniprot
Match: A0A2V7DU49_9BACT (Adenylate/guanylate cyclase domain-containing response regulator n=4 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7DU49_9BACT)

HSP 1 Score: 187 bits (475), Expect = 4.800e-56
Identity = 88/131 (67.18%), Postives = 107/131 (81.68%), Query Frame = 1
Query:    4 QLAESIVSGGGEDLLKTHRREVVVVFLDLRGFTAFTDTGEPEEVMGVLGEYHKVMGQLIMTHEGTLERFAGDGLMIFFNDPIKLENLTANAVKMSLAMQENFAPLRAAWKKRGFELDLGIGIAQGYATLGA 396
            QLAE IV+GG ED LK+HRR++ VVFLDLRGFTAF +T EPEEVMGVL EYH  MG+LI+ HEGTLERFAGDG+M+FFNDP+ + N    A++M+LAM+E+   L A W+KRGF LD G G+AQGYAT+GA
Sbjct:  160 QLAELIVAGGAEDPLKSHRRDITVVFLDLRGFTAFAETAEPEEVMGVLREYHAEMGRLILAHEGTLERFAGDGIMVFFNDPVPVPNPAERAIRMTLAMRESVTDLLATWRKRGFALDFGAGLAQGYATIGA 290          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15053.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F4B3S5_9PROT1.590e-7489.31Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A1Y5FGG7_9GAMM1.890e-6580.92Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A536U6N5_9PROT3.170e-5969.47Response regulator n=1 Tax=Betaproteobacteria bact... [more]
A0A1G0KC09_9GAMM1.770e-5769.23Guanylate cyclase n=1 Tax=Gammaproteobacteria bact... [more]
A0A2V6SDY1_9BACT2.260e-5767.18Adenylate/guanylate cyclase domain-containing resp... [more]
A0A1F9KXD2_9DELT2.700e-5768.70Guanylate cyclase n=1 Tax=Deltaproteobacteria bact... [more]
A0A534MZU3_9DELT3.080e-5767.69Response regulator (Fragment) n=1 Tax=Deltaproteob... [more]
A0A2V6V0I2_9BACT3.720e-5767.18Adenylate/guanylate cyclase domain-containing resp... [more]
A0A1F4DZN9_9PROT3.960e-5667.18Guanylate cyclase n=1 Tax=Betaproteobacteria bacte... [more]
A0A2V7DU49_9BACT4.800e-5667.18Adenylate/guanylate cyclase domain-containing resp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15053contigP-wetherbeei_contig15053:1..396 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog395495.Lcho_0045
PFAMsGuanylate_cyc,Response_reg
Model size396
Max annot lvl28216|Betaproteobacteria
KEGG rclassRC00295
KEGG koko:K01768
KEGG ReactionR00089,R00434
KEGG Pathwayko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213
KEGG ModuleM00695
Hectar predicted targeting categoryother localisation
Exons1
Evalue8.86e-51
EggNOG OGsCOG2114@1|root,COG3437@1|root,COG2114@2|Bacteria,COG3437@2|Bacteria,1QY14@1224|Proteobacteria,2WH9F@28216|Betaproteobacteria
EC4.6.1.1
DescriptionBelongs to the adenylyl cyclase class-4 guanylyl cyclase family
Cds size396
COG categoryT
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186043.0559063-CDS-P-wetherbeei_contig15053:0..3961683186043.0559063-CDS-P-wetherbeei_contig15053:0..396Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15053 1..396 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15053.1.1prot_P-wetherbeei_contig15053.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15053 1..396 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15053.1.1

>prot_P-wetherbeei_contig15053.1.1 ID=prot_P-wetherbeei_contig15053.1.1|Name=mRNA_P-wetherbeei_contig15053.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=132bp
AQLAESIVSGGGEDLLKTHRREVVVVFLDLRGFTAFTDTGEPEEVMGVLG
EYHKVMGQLIMTHEGTLERFAGDGLMIFFNDPIKLENLTANAVKMSLAMQ
ENFAPLRAAWKKRGFELDLGIGIAQGYATLGA
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mRNA from alignment at P-wetherbeei_contig15053:1..396-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15053.1.1 ID=mRNA_P-wetherbeei_contig15053.1.1|Name=mRNA_P-wetherbeei_contig15053.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=396bp|location=Sequence derived from alignment at P-wetherbeei_contig15053:1..396- (Phaeothamnion wetherbeei SAG_119_79)
GCACAGCTTGCGGAGTCCATCGTCAGCGGCGGCGGCGAAGACCTGCTGAA GACCCACCGCCGCGAAGTGGTGGTCGTGTTTCTGGATTTGCGTGGCTTCA CCGCGTTCACAGATACCGGCGAGCCCGAGGAAGTGATGGGCGTGTTGGGC GAATATCACAAAGTCATGGGTCAATTGATCATGACCCACGAAGGCACGCT CGAGCGCTTCGCCGGCGACGGCCTGATGATATTTTTCAACGACCCGATCA AGCTCGAGAACCTCACGGCGAACGCGGTGAAAATGTCGCTCGCCATGCAG GAGAATTTCGCGCCGCTGCGCGCGGCGTGGAAAAAGCGCGGTTTCGAGCT CGATCTGGGCATCGGCATCGCGCAGGGCTACGCAACGCTGGGCGCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15053:1..396-

>mRNA_P-wetherbeei_contig15053.1.1 ID=mRNA_P-wetherbeei_contig15053.1.1|Name=mRNA_P-wetherbeei_contig15053.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=396bp|location=Sequence derived from alignment at P-wetherbeei_contig15053:1..396- (Phaeothamnion wetherbeei SAG_119_79)
GCACAGCTTGCGGAGTCCATCGTCAGCGGCGGCGGCGAAGACCTGCTGAA
GACCCACCGCCGCGAAGTGGTGGTCGTGTTTCTGGATTTGCGTGGCTTCA
CCGCGTTCACAGATACCGGCGAGCCCGAGGAAGTGATGGGCGTGTTGGGC
GAATATCACAAAGTCATGGGTCAATTGATCATGACCCACGAAGGCACGCT
CGAGCGCTTCGCCGGCGACGGCCTGATGATATTTTTCAACGACCCGATCA
AGCTCGAGAACCTCACGGCGAACGCGGTGAAAATGTCGCTCGCCATGCAG
GAGAATTTCGCGCCGCTGCGCGCGGCGTGGAAAAAGCGCGGTTTCGAGCT
CGATCTGGGCATCGGCATCGCGCAGGGCTACGCAACGCTGGGCGCG
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