mRNA_P-wetherbeei_contig15004.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15004.2.1
Unique NamemRNA_P-wetherbeei_contig15004.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15004.2.1 vs. uniprot
Match: UPI001999FCAE (ATP-binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=UPI001999FCAE)

HSP 1 Score: 513 bits (1320), Expect = 1.030e-177
Identity = 254/266 (95.49%), Postives = 262/266 (98.50%), Query Frame = 1
Query:   67 ILLDVEDRANVDAERSPEIGTLLKVDCPTSISLALVSALSSPMPSHARGEHELRIVEVEFIGELPKDEHGRPKTFRRGISSYPSLGDTVYRASRSELSKAYACDSETSIRVGHIQQDPSIPAMIKIDEMLGKHFAVLGTTGTGKSCTVALILRRILEKNPQAHILLLDVHREYAQSFRGMSEVITPDNMVLPFWLLNFEEAVEILIGQQPGRETDVEILRELIPQAKARYMNNQRRDKNGATPRGSVFDGANIGVDTPLPYRTSDL 864
            ILLD+E+R NVDAERSPEIGTLLKVDCPTSISLALVSALSSPMPSHARGE ELRIVEVEFIGELPKDE GRPK FRRGISSYPSLGDTVYRASRSELSKAYACDSETSIRVGHIQQDPSIPAMIKIDEMLGKHFAVLGTTGTGKSCTVALILRRILEKNPQAHI+LLDVHREYAQSF+G+SEVITPDNMVLPFWLLNFEE+VEILIGQQPGRETDVEILRELIPQAKARYMNNQRRDKNGATPRGSV+DG+NIGVDTPLPYRTSDL
Sbjct:    1 ILLDIEERPNVDAERSPEIGTLLKVDCPTSISLALVSALSSPMPSHARGEQELRIVEVEFIGELPKDEQGRPKAFRRGISSYPSLGDTVYRASRSELSKAYACDSETSIRVGHIQQDPSIPAMIKIDEMLGKHFAVLGTTGTGKSCTVALILRRILEKNPQAHIMLLDVHREYAQSFKGISEVITPDNMVLPFWLLNFEESVEILIGQQPGRETDVEILRELIPQAKARYMNNQRRDKNGATPRGSVYDGSNIGVDTPLPYRTSDL 266          
BLAST of mRNA_P-wetherbeei_contig15004.2.1 vs. uniprot
Match: UPI0019C21689 (ATP-binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=UPI0019C21689)

HSP 1 Score: 429 bits (1103), Expect = 1.630e-144
Identity = 217/285 (76.14%), Postives = 243/285 (85.26%), Query Frame = 1
Query:   13 EPIARVGRIVAVTGAHAIILLDVEDRANVDA-ERSPEIGTLLKVDCPTSISLALVSALSSPMPSHARGEHELRIVEVEFIGELPKDEHGRPKTFRRGISSYPSLGDTVYRASRSELSKAYACDSETSIRVGHIQQDPSIPAMIKIDEMLGKHFAVLGTTGTGKSCTVALILRRILEKNPQAHILLLDVHREYAQSFRGMSEVITPDNMVLPFWLLNFEEAVEILIGQQPGRETDVEILRELIPQAKARYMNNQRRDKNGATPRGSVFDGANIGVDTPLPYRTSDL 864
            E + RVGRIVAVTGAHA+IL+D     +  A E+SPEIGTLLKVD P SISLA++SALSSPMPSH+    ELRIVEVEFIGEL KD  G P  FRRG+S YPSLGD VYRA++SEL  AYACD +T+IRVGHIQQD +IPAMIKIDEMLGKHFAVLGTTGTGKSCTVALILRRILEKNPQAHILLLDVHREY+QSFR ++E+ITPDNM LPFWLLNF+E VEILIGQQP RETDVE+LRELIPQAK RYM NQRRD+NG   +  + +  N+GVDTP+PYRTSDL
Sbjct:   17 ETVERVGRIVAVTGAHAVILIDAGSHQSGGADEKSPEIGTLLKVDTPRSISLAMISALSSPMPSHSPEVRELRIVEVEFIGELAKDAQGSPTAFRRGVSCYPSLGDIVYRATKSELGTAYACDVDTAIRVGHIQQDSAIPAMIKIDEMLGKHFAVLGTTGTGKSCTVALILRRILEKNPQAHILLLDVHREYSQSFREVAEIITPDNMNLPFWLLNFDEIVEILIGQQPNRETDVEVLRELIPQAKVRYMTNQRRDRNGVRSKDQL-ETQNVGVDTPVPYRTSDL 300          
BLAST of mRNA_P-wetherbeei_contig15004.2.1 vs. uniprot
Match: UPI001905B806 (DUF87 domain-containing protein n=1 Tax=Aestuariivirga sp. YIM B02566 TaxID=2800327 RepID=UPI001905B806)

HSP 1 Score: 427 bits (1097), Expect = 1.480e-143
Identity = 214/289 (74.05%), Postives = 244/289 (84.43%), Query Frame = 1
Query:    1 APRAEPIARVGRIVAVTGAHAIILLDVEDRANV-DAERSPEIGTLLKVDCPTSISLALVSALSSPMPSHARGEHELRIVEVEFIGELPKDEHGRPKTFRRGISSYPSLGDTVYRASRSELSKAYACDSETSIRVGHIQQDPSIPAMIKIDEMLGKHFAVLGTTGTGKSCTVALILRRILEKNPQAHILLLDVHREYAQSFRGMSEVITPDNMVLPFWLLNFEEAVEILIGQQPGRETDVEILRELIPQAKARYMNNQRRDKNGATPRGSVFDGANIGVDTPLPYRTSDL 864
            AP  + + R+GRIVAVTG HAIILLD  D  +   +   PEIGTLLKVD  TS++LALVSALSSPMPSH + + ELRI+EVEFIGELPKDEHGRPK+FRRGIS+YPSLG+ V+RAS+ ELSKAYACD++T+IR+GHIQQD SIPAM+KIDE+LGKHFAVLGTTGTGKSC+VALILRRILEKNPQAHI+LLDVHREY QSF   SEVITP+NM LPFWLLNFEE VEILIG Q  RE D+EILRELIP AK RYM+NQR+DK+    R    DG N+GVDTP+PYR SDL
Sbjct:    6 APAIDSVDRIGRIVAVTGGHAIILLDTADGQDQHSSSHCPEIGTLLKVDTSTSVTLALVSALSSPMPSHGQSDQELRIIEVEFIGELPKDEHGRPKSFRRGISTYPSLGNVVFRASKEELSKAYACDTDTAIRIGHIQQDASIPAMVKIDELLGKHFAVLGTTGTGKSCSVALILRRILEKNPQAHIVLLDVHREYEQSFNEWSEVITPENMTLPFWLLNFEEIVEILIGTQAHREADIEILRELIPIAKQRYMHNQRKDKSNVL-RQRDLDGTNVGVDTPVPYRASDL 293          
BLAST of mRNA_P-wetherbeei_contig15004.2.1 vs. uniprot
Match: A0A6G6WYM1_9HYPH (DUF87 domain-containing protein n=1 Tax=Nordella sp. HKS 07 TaxID=2712222 RepID=A0A6G6WYM1_9HYPH)

HSP 1 Score: 412 bits (1058), Expect = 1.230e-137
Identity = 212/288 (73.61%), Postives = 238/288 (82.64%), Query Frame = 1
Query:    4 PRAEPIARVGRIVAVTGAHAIILLDVEDRANVDAE-RSPEIGTLLKVDCPTSISLALVSALSSPMPSHARGEHELRIVEVEFIGELPKDEHGRPKTFRRGISSYPSLGDTVYRASRSELSKAYACDSETSIRVGHIQQDPSIPAMIKIDEMLGKHFAVLGTTGTGKSCTVALILRRILEKNPQAHILLLDVHREYAQSFRGMSEVITPDNMVLPFWLLNFEEAVEILIGQQPGRETDVEILRELIPQAKARYMNNQRRDKNGATPRGSVFDGANIGVDTPLPYRTSDL 864
            P  + + R+GRIVAVTGAHAIILLD  D     A    PEIGTLLKVD   S++LALVSALSSPMPSH + + ELRI+EVEFIGELPKDE GRPK+FRRGISSYPSL + V+RAS+ ELSKAYACD++TSIR+GHIQQD SIPAM+KIDE+LGKHFAVLGTTGTGKSC+VALILRRILEKNPQAHI+LLDVHREY QSF   SEVITP+NM LPFWLLNFEE VEILIG Q  RETD+EILRELIP AK RYM NQR+DK     R    +  N+GVD+P+PYR SDL
Sbjct:   15 PAIDSVERIGRIVAVTGAHAIILLDTADGQYQHASSHCPEIGTLLKVDTLHSVTLALVSALSSPMPSHGQSDQELRIIEVEFIGELPKDELGRPKSFRRGISSYPSLRNVVFRASKEELSKAYACDTDTSIRIGHIQQDASIPAMVKIDELLGKHFAVLGTTGTGKSCSVALILRRILEKNPQAHIVLLDVHREYEQSFNEWSEVITPENMTLPFWLLNFEEIVEILIGTQAHRETDIEILRELIPIAKQRYMQNQRKDKAHLL-RTRDSESVNVGVDSPVPYRASDL 301          
BLAST of mRNA_P-wetherbeei_contig15004.2.1 vs. uniprot
Match: A0A847ZU12_9HYPH (ATP-binding protein (Fragment) n=1 Tax=Phyllobacteriaceae bacterium TaxID=1871068 RepID=A0A847ZU12_9HYPH)

HSP 1 Score: 407 bits (1045), Expect = 1.340e-136
Identity = 198/252 (78.57%), Postives = 225/252 (89.29%), Query Frame = 1
Query:  109 RSPEIGTLLKVDCPTSISLALVSALSSPMPSHARGEHELRIVEVEFIGELPKDEHGRPKTFRRGISSYPSLGDTVYRASRSELSKAYACDSETSIRVGHIQQDPSIPAMIKIDEMLGKHFAVLGTTGTGKSCTVALILRRILEKNPQAHILLLDVHREYAQSFRGMSEVITPDNMVLPFWLLNFEEAVEILIGQQPGRETDVEILRELIPQAKARYMNNQRRDKNGATPRGSVFDGANIGVDTPLPYRTSDL 864
            + PEIGTLLK D P +I+LALVSALSSPMPS  +GE E+RIVEVEFIGELPK + G PK+FRRG+S+YPSLGD VYRASRSEL+ AYACD+++S+RVGHIQQDPSIPAMIK+D+MLGKHF++LGTTGTGKSCTVALILRRILEKNPQAHILLLDVHREYAQSF+G+SEVITP+NM LPFWLLNF+EAVEILIG QP R+ DVEILRELIPQAK RYMNNQRRDK     R ++ D   IGVDTP+P+RTSDL
Sbjct:    8 KGPEIGTLLKADTPHAITLALVSALSSPMPSQDKGEREMRIVEVEFIGELPKGQDGMPKSFRRGVSNYPSLGDAVYRASRSELAMAYACDADSSVRVGHIQQDPSIPAMIKVDDMLGKHFSILGTTGTGKSCTVALILRRILEKNPQAHILLLDVHREYAQSFQGISEVITPENMSLPFWLLNFDEAVEILIGNQPNRDADVEILRELIPQAKIRYMNNQRRDKTAL--RSNLVDNQAIGVDTPIPFRTSDL 257          
BLAST of mRNA_P-wetherbeei_contig15004.2.1 vs. uniprot
Match: UPI001FF047A9 (DUF87 domain-containing protein n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=UPI001FF047A9)

HSP 1 Score: 404 bits (1037), Expect = 1.550e-134
Identity = 199/285 (69.82%), Postives = 234/285 (82.11%), Query Frame = 1
Query:   10 AEPIARVGRIVAVTGAHAIILLDVEDRANVDAERSPEIGTLLKVDCPTSISLALVSALSSPMPSHARGEHELRIVEVEFIGELPKDEHGRPKTFRRGISSYPSLGDTVYRASRSELSKAYACDSETSIRVGHIQQDPSIPAMIKIDEMLGKHFAVLGTTGTGKSCTVALILRRILEKNPQAHILLLDVHREYAQSFRGMSEVITPDNMVLPFWLLNFEEAVEILIGQQPGRETDVEILRELIPQAKARYMNNQRRDKNGATPRGSVFDGANIGVDTPLPYRTSDL 864
            A+   R+GRIVAVTG+ A+ILLD  D    D ++  EIGTLLKV+   SI+LAL+SALSSPMP+   GE E RI+EVEFIGE+ + + G    FRRG+S+YPSLGDTV+RA+R ELS AYACDS +++RVGHIQQDPSIPAM+KIDEMLGKHFA+LGTTGTGKSC VAL+LRRILE++PQAHILLLDVHREYAQ+F GM E+ITP+NM LPFWLLNF+EAVEIL+GQQ  RE DVE+LRE+IP AKARYM NQ+RDK G      V    NIGVDTP+PYRTSDL
Sbjct:   19 ADSTERMGRIVAVTGSKAVILLDARDSVFEDQKQIAEIGTLLKVEASNSITLALISALSSPMPTTQSGEGETRIIEVEFIGEMMRQQDGSFSGFRRGVSTYPSLGDTVFRATRRELSLAYACDSTSAVRVGHIQQDPSIPAMVKIDEMLGKHFAILGTTGTGKSCAVALVLRRILERSPQAHILLLDVHREYAQAFNGMCEIITPENMALPFWLLNFDEAVEILVGQQSSREADVEVLREIIPMAKARYMGNQKRDKTGGLRARDVLVENNIGVDTPIPYRTSDL 303          
BLAST of mRNA_P-wetherbeei_contig15004.2.1 vs. uniprot
Match: A0A7Y2FT92_9HYPH (ATP-binding protein (Fragment) n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7Y2FT92_9HYPH)

HSP 1 Score: 395 bits (1016), Expect = 9.250e-134
Identity = 199/280 (71.07%), Postives = 229/280 (81.79%), Query Frame = 1
Query:   25 RVGRIVAVTGAHAIILLDVEDRANVDAERSPEIGTLLKVDCPTSISLALVSALSSPMPSHARGEHELRIVEVEFIGELPKDEHGRPKTFRRGISSYPSLGDTVYRASRSELSKAYACDSETSIRVGHIQQDPSIPAMIKIDEMLGKHFAVLGTTGTGKSCTVALILRRILEKNPQAHILLLDVHREYAQSFRGMSEVITPDNMVLPFWLLNFEEAVEILIGQQPGRETDVEILRELIPQAKARYMNNQRRDKNGATPRGSVFDGANIGVDTPLPYRTSDL 864
            R+GRIVAVTG HAIILLD  +    +A RSPEIGTLLKV+   S+SLALVSALS+PMPSH+  E E+RIVEVEFIGELPK E G P  FRRGIS+YP LGD V+R+S++EL  AYACD+ +SIR+G IQQD SIPAM+KIDE+LGKHFAVLGTTGTGKSC VALILRRILEKNP+AHILLLDVHREYA SF+  +EV+TP+NM LPFWLLNFEE VEILI    GRE D+E+LRELIP AK RYM+NQR+D+  A       D  NIG+DTP+PYR SDL
Sbjct:   26 RIGRIVAVTGGHAIILLDATE--GPEAGRSPEIGTLLKVETEASVSLALVSALSAPMPSHSEDEQEVRIVEVEFIGELPKGEDGSPTHFRRGISNYPGLGDLVFRSSKTELEMAYACDTASSIRIGAIQQDRSIPAMVKIDELLGKHFAVLGTTGTGKSCAVALILRRILEKNPKAHILLLDVHREYAASFKEFAEVVTPENMNLPFWLLNFEEIVEILIAHHAGREQDIEVLRELIPMAKQRYMSNQRKDRLSALRAKEGADAHNIGIDTPVPYRASDL 303          
BLAST of mRNA_P-wetherbeei_contig15004.2.1 vs. uniprot
Match: A0A849ECL8_9HYPH (ATP-binding protein n=1 Tax=Anderseniella sp. TaxID=1872568 RepID=A0A849ECL8_9HYPH)

HSP 1 Score: 400 bits (1028), Expect = 1.390e-132
Identity = 204/282 (72.34%), Postives = 233/282 (82.62%), Query Frame = 1
Query:   25 RVGRIVAVTGAHAIILLDVEDRANVDAERSPEIGTLLKVDCPTSISLALVSALSSPMPSHARGEHELRIVEVEFIGELPKDEHGRPKTFRRGISSYPSLGDTVYRASRSELSKAYACDSETSIRVGHIQQDPSIPAMIKIDEMLGKHFAVLGTTGTGKSCTVALILRRILEKNPQAHILLLDVHREYAQSFRGMSEVITPDNMVLPFWLLNFEEAVEILIGQQPGRETDVEILRELIPQAKARYMNNQRRDKNGATPRGSVFDG--ANIGVDTPLPYRTSDL 864
            R+GR+VAVTGAHAIILLD +D  +   + SPEIGTLLKVD   +I+LALVSALSSP PSH   E E+RIVEVEFIGELPKD+HG PK+FRRG+SSYP LGD V RAS++ELS AYA D +TSIR+GHIQQD +IPAM+KIDE+LGKHFAVLGTTGTGKSC+VALILRRILEKNP+AHILLLDVHREYA SF+  +EVI P NM LPFW+LNFEE VEILIG QP RE D+EILRELIP AKARY  + RRD+  A    S   G   N+GVDTP+PYR+SDL
Sbjct:   21 RIGRLVAVTGAHAIILLDADDAFSAGNDGSPEIGTLLKVDTEATITLALVSALSSPTPSHENPEQEMRIVEVEFIGELPKDDHGNPKSFRRGVSSYPGLGDIVSRASQTELSMAYASDEDTSIRIGHIQQDITIPAMVKIDELLGKHFAVLGTTGTGKSCSVALILRRILEKNPKAHILLLDVHREYASSFKEYAEVIQPANMSLPFWMLNFEEFVEILIGNQPNREQDIEILRELIPLAKARYAASTRRDQVAAPSLRSKDPGDTMNLGVDTPVPYRSSDL 302          
BLAST of mRNA_P-wetherbeei_contig15004.2.1 vs. uniprot
Match: A0A2W2B0B6_9HYPH (DUF87 domain-containing protein n=2 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2B0B6_9HYPH)

HSP 1 Score: 392 bits (1008), Expect = 3.620e-130
Identity = 193/280 (68.93%), Postives = 233/280 (83.21%), Query Frame = 1
Query:   25 RVGRIVAVTGAHAIILLDVEDRANVDAERSPEIGTLLKVDCPTSISLALVSALSSPMPSHARGEHELRIVEVEFIGELPKDEHGRPKTFRRGISSYPSLGDTVYRASRSELSKAYACDSETSIRVGHIQQDPSIPAMIKIDEMLGKHFAVLGTTGTGKSCTVALILRRILEKNPQAHILLLDVHREYAQSFRGMSEVITPDNMVLPFWLLNFEEAVEILIGQQPGRETDVEILRELIPQAKARYMNNQRRDKNGATPRGSVFDGANIGVDTPLPYRTSDL 864
            R+GRIVAVTGAHA+IL+D    A+  A ++PEIGTLL+VD P +ISL +VSALSSPMPSH   E E RI+EVEF+GELP+DE G P  FRRG+S YPSLGDTV+RAS+ EL+KAYA  ++ +IRVGHI QD +IPAM+K+D++LGKHFA+LGTTGTGKSCTVAL+LRRILEKNPQ H+LLLDVHREYA +FR ++EVI+P NM LPFWLLNFEE VEILIGQQP RE DVE+LRELIP AK R+MNNQRR++          + ++IGVDTP+PYR+SDL
Sbjct:   48 RIGRIVAVTGAHAVILIDGGSDADARA-KTPEIGTLLRVDTPRTISLCIVSALSSPMPSHMPDEPETRIIEVEFLGELPRDERGEPMHFRRGVSCYPSLGDTVFRASKHELAKAYAYHTDMAIRVGHITQDEAIPAMVKVDDLLGKHFAILGTTGTGKSCTVALLLRRILEKNPQGHVLLLDVHREYAHAFRDIAEVISPANMNLPFWLLNFEEIVEILIGQQPNREADVEVLRELIPIAKLRFMNNQRRERPALQRAREQIEPSSIGVDTPVPYRSSDL 326          
BLAST of mRNA_P-wetherbeei_contig15004.2.1 vs. uniprot
Match: A0A3B0S737_9ZZZZ (Bipolar DNA helicase HerA n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0S737_9ZZZZ)

HSP 1 Score: 360 bits (925), Expect = 3.410e-117
Identity = 184/285 (64.56%), Postives = 218/285 (76.49%), Query Frame = 1
Query:   10 AEPIARVGRIVAVTGAHAIILLDVEDRANVDAERSPEIGTLLKVDCPTSISLALVSALSSPMPSHARGEHELRIVEVEFIGELPKDEHGRPKTFRRGISSYPSLGDTVYRASRSELSKAYACDSETSIRVGHIQQDPSIPAMIKIDEMLGKHFAVLGTTGTGKSCTVALILRRILEKNPQAHILLLDVHREYAQSFRGMSEVITPDNMVLPFWLLNFEEAVEILIGQQPGRETDVEILRELIPQAKARYMNNQRRDKNGATPRGSVFDGANIGVDTPLPYRTSDL 864
            A+ + ++GR+VAVTGAHAIILL+  D    D ++SPEIGTLLKVD   SI+LAL+S+LS+P P       +L+IVEVEFIGELPKDE+G P  FRRGIS YP+LGD V RASR EL+ AYA   + ++RVG+I+QD SIPAM+K DE+LGKHFAVLGTTGTGKSC+VALILRRILE NP AHILLLDVHREYA +F+   E++TP N+VLPFWLLNFEE VEI+I  Q  RE D+EILRELIP AK RY   +  DK          DGA IGVDTP PYR SD+
Sbjct:    2 ADAMTKIGRVVAVTGAHAIILLEKSDSLPEDMQKSPEIGTLLKVDTEPSIALALISSLSTPTPGAQSAGEDLQIVEVEFIGELPKDENGNPGNFRRGISCYPALGDVVGRASRQELAMAYASGGDVAVRVGYIKQDASIPAMVKTDELLGKHFAVLGTTGTGKSCSVALILRRILEANPLAHILLLDVHREYAAAFKDFGEIVTPANLVLPFWLLNFEEMVEIIIAGQKNREADIEILRELIPMAKQRYKGGRSGDKISRLRAKDGDDGA-IGVDTPYPYRISDV 285          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15004.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001999FCAE1.030e-17795.49ATP-binding protein n=1 Tax=Hyphomicrobiales bacte... [more]
UPI0019C216891.630e-14476.14ATP-binding protein n=1 Tax=Hyphomicrobiales bacte... [more]
UPI001905B8061.480e-14374.05DUF87 domain-containing protein n=1 Tax=Aestuariiv... [more]
A0A6G6WYM1_9HYPH1.230e-13773.61DUF87 domain-containing protein n=1 Tax=Nordella s... [more]
A0A847ZU12_9HYPH1.340e-13678.57ATP-binding protein (Fragment) n=1 Tax=Phyllobacte... [more]
UPI001FF047A91.550e-13469.82DUF87 domain-containing protein n=1 Tax=Aestuariiv... [more]
A0A7Y2FT92_9HYPH9.250e-13471.07ATP-binding protein (Fragment) n=1 Tax=Hyphomicrob... [more]
A0A849ECL8_9HYPH1.390e-13272.34ATP-binding protein n=1 Tax=Anderseniella sp. TaxI... [more]
A0A2W2B0B6_9HYPH3.620e-13068.93DUF87 domain-containing protein n=2 Tax=Aestuariiv... [more]
A0A3B0S737_9ZZZZ3.410e-11764.56Bipolar DNA helicase HerA n=1 Tax=hydrothermal ven... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15004contigP-wetherbeei_contig15004:789..1652 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog670307.HYPDE_23913
Preferred nameMA20_26515
PFAMsDUF87
Model size864
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K06915
Hectar predicted targeting categoryother localisation
Exons1
Evalue8.61e-89
EggNOG OGsCOG0433@1|root,COG0433@2|Bacteria,1MUSH@1224|Proteobacteria,2TUN9@28211|Alphaproteobacteria
DescriptionDomain of unknown function DUF87
Cds size864
COG categoryS
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186040.943044-CDS-P-wetherbeei_contig15004:788..16521683186040.943044-CDS-P-wetherbeei_contig15004:788..1652Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15004 789..1652 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15004.2.1prot_P-wetherbeei_contig15004.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15004 789..1652 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15004.2.1

>prot_P-wetherbeei_contig15004.2.1 ID=prot_P-wetherbeei_contig15004.2.1|Name=mRNA_P-wetherbeei_contig15004.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=288bp
APRAEPIARVGRIVAVTGAHAIILLDVEDRANVDAERSPEIGTLLKVDCP
TSISLALVSALSSPMPSHARGEHELRIVEVEFIGELPKDEHGRPKTFRRG
ISSYPSLGDTVYRASRSELSKAYACDSETSIRVGHIQQDPSIPAMIKIDE
MLGKHFAVLGTTGTGKSCTVALILRRILEKNPQAHILLLDVHREYAQSFR
GMSEVITPDNMVLPFWLLNFEEAVEILIGQQPGRETDVEILRELIPQAKA
RYMNNQRRDKNGATPRGSVFDGANIGVDTPLPYRTSDL
back to top

mRNA from alignment at P-wetherbeei_contig15004:789..1652+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15004.2.1 ID=mRNA_P-wetherbeei_contig15004.2.1|Name=mRNA_P-wetherbeei_contig15004.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=864bp|location=Sequence derived from alignment at P-wetherbeei_contig15004:789..1652+ (Phaeothamnion wetherbeei SAG_119_79)
GCCCCCCGCGCTGAACCCATTGCCCGCGTCGGCCGCATCGTTGCCGTAAC CGGCGCCCACGCCATCATCCTGCTTGATGTCGAAGACCGCGCCAATGTTG ACGCCGAGAGAAGCCCTGAAATTGGAACCTTGCTGAAAGTGGATTGCCCC ACCTCCATTTCGCTGGCGCTGGTTTCCGCCTTGAGTTCGCCCATGCCATC CCATGCCAGGGGTGAGCACGAATTGCGCATTGTTGAAGTGGAGTTCATCG GCGAGCTTCCCAAGGATGAGCATGGCCGGCCAAAAACCTTCCGCCGCGGC ATTTCCTCTTATCCCTCGCTCGGCGACACCGTGTACCGCGCCAGCCGCAG CGAATTGTCGAAAGCCTATGCCTGCGATTCCGAAACCTCCATTCGCGTTG GCCACATTCAGCAGGACCCGTCCATTCCCGCCATGATCAAGATTGATGAA ATGCTGGGCAAGCATTTCGCCGTGCTGGGAACCACCGGCACCGGCAAGTC CTGCACCGTGGCCCTCATTCTCCGCCGCATCCTCGAGAAAAATCCCCAGG CCCATATCCTGCTGCTCGATGTCCACCGCGAATATGCCCAATCCTTCAGG GGCATGTCGGAGGTCATAACCCCCGACAACATGGTCCTGCCCTTCTGGCT CCTGAACTTTGAAGAGGCCGTTGAAATTCTCATTGGCCAGCAGCCCGGCC GCGAGACCGACGTGGAAATCCTCCGCGAGCTCATTCCGCAGGCCAAGGCG CGCTACATGAACAATCAGCGCCGCGACAAAAATGGCGCAACCCCGCGCGG GTCGGTTTTCGATGGCGCAAACATCGGCGTTGATACGCCACTGCCTTACC GGACCTCCGATCTC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig15004:789..1652+

>mRNA_P-wetherbeei_contig15004.2.1 ID=mRNA_P-wetherbeei_contig15004.2.1|Name=mRNA_P-wetherbeei_contig15004.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=864bp|location=Sequence derived from alignment at P-wetherbeei_contig15004:789..1652+ (Phaeothamnion wetherbeei SAG_119_79)
GCCCCCCGCGCTGAACCCATTGCCCGCGTCGGCCGCATCGTTGCCGTAAC
CGGCGCCCACGCCATCATCCTGCTTGATGTCGAAGACCGCGCCAATGTTG
ACGCCGAGAGAAGCCCTGAAATTGGAACCTTGCTGAAAGTGGATTGCCCC
ACCTCCATTTCGCTGGCGCTGGTTTCCGCCTTGAGTTCGCCCATGCCATC
CCATGCCAGGGGTGAGCACGAATTGCGCATTGTTGAAGTGGAGTTCATCG
GCGAGCTTCCCAAGGATGAGCATGGCCGGCCAAAAACCTTCCGCCGCGGC
ATTTCCTCTTATCCCTCGCTCGGCGACACCGTGTACCGCGCCAGCCGCAG
CGAATTGTCGAAAGCCTATGCCTGCGATTCCGAAACCTCCATTCGCGTTG
GCCACATTCAGCAGGACCCGTCCATTCCCGCCATGATCAAGATTGATGAA
ATGCTGGGCAAGCATTTCGCCGTGCTGGGAACCACCGGCACCGGCAAGTC
CTGCACCGTGGCCCTCATTCTCCGCCGCATCCTCGAGAAAAATCCCCAGG
CCCATATCCTGCTGCTCGATGTCCACCGCGAATATGCCCAATCCTTCAGG
GGCATGTCGGAGGTCATAACCCCCGACAACATGGTCCTGCCCTTCTGGCT
CCTGAACTTTGAAGAGGCCGTTGAAATTCTCATTGGCCAGCAGCCCGGCC
GCGAGACCGACGTGGAAATCCTCCGCGAGCTCATTCCGCAGGCCAAGGCG
CGCTACATGAACAATCAGCGCCGCGACAAAAATGGCGCAACCCCGCGCGG
GTCGGTTTTCGATGGCGCAAACATCGGCGTTGATACGCCACTGCCTTACC
GGACCTCCGATCTC
back to top