mRNA_P-wetherbeei_contig150.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig150.4.1 vs. uniprot
Match: A0A5J5BJZ0_9ASTE (Uncharacterized protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5BJZ0_9ASTE) HSP 1 Score: 119 bits (299), Expect = 9.340e-30 Identity = 68/144 (47.22%), Postives = 86/144 (59.72%), Query Frame = 3
Query: 321 SSDEEKLHNVADEFYDDEADNADEVWAAENMRPKSKGQKEVKSDADLSCPACFTLVCTECQRHEGYKNQFRALFVMNVTVQGEEMV----LKEDAGVE--------------ERLRGVRCSECGTDLGVIDEEEVYHFFNVIPT 698
S D+E ++V EFYD E D DE+W ++ K KG+ SDA LSCPACFT +C ECQRHE Y Q+RA+FVMN ++ ++ LK G E LR V CS C T++GVIDEEEVYHFFNV+P+
Sbjct: 22 SDDDEIDYSVKPEFYDSELDEKDELW----VQNKRKGRD---SDASLSCPACFTTLCLECQRHEKYVTQYRAVFVMNCKIKSGQLSKQGSLKRKRGKRRKESGESEADPLSGETLRPVSCSVCSTEVGVIDEEEVYHFFNVLPS 158
BLAST of mRNA_P-wetherbeei_contig150.4.1 vs. uniprot
Match: A0A0K9Q1T1_ZOSMR (E2F-associated phosphoprotein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9Q1T1_ZOSMR) HSP 1 Score: 117 bits (294), Expect = 1.980e-29 Identity = 60/126 (47.62%), Postives = 82/126 (65.08%), Query Frame = 3
Query: 321 SSDEEKLHNVADEFYDDEADNADEVWAAENMRPKSKGQKEVKSDADLSCPACFTLVCTECQRHEGYKNQFRALFVMNVTVQGEEMVLKEDAGVEERLRGVRCSECGTDLGVIDEEEVYHFFNVIPT 698
SSD+E ++V +FYD D+ DEVW K +K+V +DA LSCPAC +VC +CQRHE Y Q+RA+FV N ++ E+ E+A EE L V C+ C T LGV D++EVYHFF+V+P+
Sbjct: 8 SSDDEIDYSVKPDFYDSNLDDRDEVWV-------HKRRKDVTTDAVLSCPACLNMVCIDCQRHEKYVTQYRAMFVFNCKIKEIEVKHAENAKPEELLWPVCCAVCDTKLGVFDQDEVYHFFDVLPS 126
BLAST of mRNA_P-wetherbeei_contig150.4.1 vs. uniprot
Match: A0A199VCB7_ANACO (E2F-associated phosphoprotein n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A199VCB7_ANACO) HSP 1 Score: 118 bits (296), Expect = 2.450e-29 Identity = 66/139 (47.48%), Postives = 86/139 (61.87%), Query Frame = 3
Query: 321 SSDEEKLHNVADEFYDDEADNADEVWAAENMRPKSKGQKEVKSDADLSCPACFTLVCTECQRHEGYKNQFRALFVMNVTVQ-----------GEEMVLKEDAGV--EERLRGVRCSECGTDLGVIDEEEVYHFFNVIPT 698
SSD+E ++V EFYD D+ DE WA + + +S SDA LSCPACFT +C +CQRHE Y Q+RA+FV N V+ G++ + D+G EE R V CS C T++GV+DEEEVYHFFNVIP+
Sbjct: 25 SSDDEIDYSVKPEFYDPNIDDIDEKWAHKQRKGRS-------SDAILSCPACFTTLCLDCQRHEKYVTQYRAMFVRNCKVRTDQILRPAKRKGKKSKARSDSGKPEEEVFRPVCCSVCSTEVGVLDEEEVYHFFNVIPS 156
BLAST of mRNA_P-wetherbeei_contig150.4.1 vs. uniprot
Match: A0A834YN18_9MAGN (Uncharacterized protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834YN18_9MAGN) HSP 1 Score: 118 bits (295), Expect = 6.200e-29 Identity = 67/148 (45.27%), Postives = 90/148 (60.81%), Query Frame = 3
Query: 309 AKANSSDEEKLHNVADEFYDDEADNADEVWAAENMRPKSKGQKEVKSDADLSCPACFTLVCTECQRHEGYKNQFRALFVMNVTVQGEEMVLKE----------------DAGVE--ERLRGVRCSECGTDLGVIDEEEVYHFFNVIPT 698
A A S D+E +++ EFYD + D DE W ++ KSKG SDA LSCPACFT +C ECQRHE Y Q+RA+FV+N V+ E+++ + +AG E E R V CS C T++G+IDE+EVYHFFNV+P+
Sbjct: 37 APAFSDDDEIDYSIKPEFYDSDLDEKDESW----VQKKSKGHT---SDAVLSCPACFTSLCLECQRHEKYVTQYRAIFVVNCKVKSEKVLRQRNQKPRKGKRGRDSGESEAGPEGGETFRPVCCSVCSTEVGIIDEDEVYHFFNVLPS 177
BLAST of mRNA_P-wetherbeei_contig150.4.1 vs. uniprot
Match: A0A5J9UZK4_9POAL (Uncharacterized protein n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9UZK4_9POAL) HSP 1 Score: 117 bits (294), Expect = 6.610e-29 Identity = 65/147 (44.22%), Postives = 88/147 (59.86%), Query Frame = 3
Query: 321 SSDEEKLHNVADEFYDDEADNADEVWAAENMRPKSKGQKEVKSDADLSCPACFTLVCTECQRHEGYKNQFRALFVMNVTVQGEEMVLKEDAGVEERLRG---------------------VRCSECGTDLGVIDEEEVYHFFNVIPT 698
SSD+E ++V EFYD + D+ DE WA +K +K+ SDA LSCPACFT +C +CQRHE Y NQ+RA+FV N V+ ++ +L+ED G + +G V C C T++GV DE+EVYHFFNVIP+
Sbjct: 29 SSDDEIDYSVEPEFYDPDLDDTDERWA-------TKQRKDRTSDAVLSCPACFTTLCLDCQRHEKYVNQYRAMFVRNCKVKTDQ-ILREDKGKRKNRKGRAADSSTTSTEGENKGQAYHPVCCEVCSTEVGVYDEDEVYHFFNVIPS 167
BLAST of mRNA_P-wetherbeei_contig150.4.1 vs. uniprot
Match: UPI0007EF7A7E (E2F-associated phosphoprotein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EF7A7E) HSP 1 Score: 115 bits (289), Expect = 2.660e-28 Identity = 66/145 (45.52%), Postives = 88/145 (60.69%), Query Frame = 3
Query: 312 KANSSDEEKLHNVADEFYDDEADNADEVWAAENMRPKSKGQKEVKSDADLSCPACFTLVCTECQRHEGYKNQFRALFVMNVTVQGEEMVL---------------KEDAG-VEERLRGVRCSECGTDLGVIDEEEVYHFFNVIPT 698
K SSD+E ++V EFYD E DN D++W ++ + KGQ SDA LSCPACF+ +C ECQRHE Y Q+RA+FV N ++ + + + DAG E + V CS C T++GVIDEEEVYHFFNV+P+
Sbjct: 19 KTISSDDEIDYSVKPEFYDPELDNKDQLW----VQKRRKGQY---SDAVLSCPACFSTLCLECQRHEKYVTQYRAVFVTNCKIKNDLVAQPGIKRKRGKRGKGSSETDAGSAGETFKQVCCSTCSTEVGVIDEEEVYHFFNVLPS 156
BLAST of mRNA_P-wetherbeei_contig150.4.1 vs. uniprot
Match: V4KS56_EUTSA (Uncharacterized protein n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=V4KS56_EUTSA) HSP 1 Score: 115 bits (288), Expect = 2.980e-28 Identity = 66/147 (44.90%), Postives = 87/147 (59.18%), Query Frame = 3
Query: 312 KANSSDEEKLHNVADEFYDDEADNADEVWAAENMRPKSKGQKEVKSDADLSCPACFTLVCTECQRHEGYKNQFRALFVMNVTVQGEEMVL----------------KEDAGV--EERLRGVRCSECGTDLGVIDEEEVYHFFNVIPT 698
K S D+E +++ EFYD + D+ DE+W M K G+ SDA LSCPACFT VC ECQRHE Y QFRA+FV+N V ++++ K++ G ERL V CS C T++GV+D EE+YHFFNVIP+
Sbjct: 9 KTVSDDDEIDYSIKPEFYDSDLDDKDELW----MVKKRDGRT---SDAVLSCPACFTTVCLECQRHEQYVTQFRAVFVVNCEVDKDKVLQHSAVPSKVGKRMRDSEKQETGSADNERLNPVICSTCSTEIGVVDGEEIYHFFNVIPS 148
BLAST of mRNA_P-wetherbeei_contig150.4.1 vs. uniprot
Match: Q9FTA3_ARATH (At5g08320 n=3 Tax=Arabidopsis TaxID=3701 RepID=Q9FTA3_ARATH) HSP 1 Score: 115 bits (287), Expect = 4.190e-28 Identity = 67/148 (45.27%), Postives = 88/148 (59.46%), Query Frame = 3
Query: 312 KANSSDEEKLHNVADEFYDDEADNADEVWAAENMRPKSKGQKEVKSDADLSCPACFTLVCTECQRHEGYKNQFRALFVMNVTVQGEEMVLKE-----------------DAGVE--ERLRGVRCSECGTDLGVIDEEEVYHFFNVIPT 698
K S DEE +++ EFYD + D+ DE+W M K G+ SDA LSCPACFT VC ECQRHE Y Q+RA+FV+N V G + VL++ + G E E++ V CS C T++GV+D EE+YHFFNVIP+
Sbjct: 9 KTVSDDEEVDYSIKPEFYDSDIDDKDELW----MDKKRDGRT---SDALLSCPACFTTVCLECQRHEQYVTQYRAVFVVNCKV-GTDTVLQQNTMPLKVGKRRRDSEMQETGSEDSEKVNPVFCSACSTEIGVVDSEEIYHFFNVIPS 148
BLAST of mRNA_P-wetherbeei_contig150.4.1 vs. uniprot
Match: A0A175YPP2_DAUCS (Uncharacterized protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A175YPP2_DAUCS) HSP 1 Score: 115 bits (287), Expect = 9.390e-28 Identity = 65/141 (46.10%), Postives = 86/141 (60.99%), Query Frame = 3
Query: 321 SSDEEKLHNVADEFYDDEADNADEVWAAENMRPKSKGQKEVKSDADLSCPACFTLVCTECQRHEGYKNQFRALFVMNVTVQGEEMVL---------------KEDAG-VEERLRGVRCSECGTDLGVIDEEEVYHFFNVIP 695
SSD+E ++V EFYD E DN D++W ++ + KGQ SDA LSCPACF+ +C ECQRHE Y Q+RA+FV N ++ + + + DAG E + V CS C T++GVIDEEEVYHFFNV+P
Sbjct: 20 SSDDEIDYSVKPEFYDPELDNKDQLW----VQKRRKGQY---SDAVLSCPACFSTLCLECQRHEKYVTQYRAVFVTNCKIKNDLVAQPGIKRKRGKRGKGSSETDAGSAGETFKQVCCSTCSTEVGVIDEEEVYHFFNVLP 153
BLAST of mRNA_P-wetherbeei_contig150.4.1 vs. uniprot
Match: A0A8J4RZ46_9ROSI (Uncharacterized protein n=3 Tax=Fagaceae TaxID=3503 RepID=A0A8J4RZ46_9ROSI) HSP 1 Score: 114 bits (284), Expect = 1.340e-27 Identity = 62/140 (44.29%), Postives = 85/140 (60.71%), Query Frame = 3
Query: 321 SSDEEKLHNVADEFYDDEADNADEVWAAENMRPKSKGQKEVKSDADLSCPACFTLVCTECQRHEGYKNQFRALFVMNVTVQGEEMVLKEDA-----GVEER---------LRGVRCSECGTDLGVIDEEEVYHFFNVIPT 698
S D+E ++V EFYD + D+ DE+W K +K SDA LSCPACFT +C ECQRHE Y Q+RA+FV+N + ++ VLK++ G R L+ V CS C T++GV+DE+EVYHFFN +P+
Sbjct: 22 SDDDEIDYSVKPEFYDPKLDDKDELWV-------QKRRKGYTSDAVLSCPACFTTLCLECQRHEKYVTQYRAIFVINCKIDSDQ-VLKQNGPKLIKGKSRREASSVGGETLKKVSCSACSTEVGVVDEDEVYHFFNALPS 153 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig150.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig150.4.1 >prot_P-wetherbeei_contig150.4.1 ID=prot_P-wetherbeei_contig150.4.1|Name=mRNA_P-wetherbeei_contig150.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=140bp MDNNNGEEAKANSSDEEKLHNVADEFYDDEADNADEVWAAENMRPKSKGQback to top mRNA from alignment at P-wetherbeei_contig150:7509..8391+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig150.4.1 ID=mRNA_P-wetherbeei_contig150.4.1|Name=mRNA_P-wetherbeei_contig150.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=883bp|location=Sequence derived from alignment at P-wetherbeei_contig150:7509..8391+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig150:7509..8391+ >mRNA_P-wetherbeei_contig150.4.1 ID=mRNA_P-wetherbeei_contig150.4.1|Name=mRNA_P-wetherbeei_contig150.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=420bp|location=Sequence derived from alignment at P-wetherbeei_contig150:7509..8391+ (Phaeothamnion wetherbeei SAG_119_79)back to top |