mRNA_P-wetherbeei_contig15.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15.2.1
Unique NamemRNA_P-wetherbeei_contig15.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15.2.1 vs. uniprot
Match: A0A835Z197_9STRA (Plastid ribosomal protein S1 (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z197_9STRA)

HSP 1 Score: 528 bits (1360), Expect = 2.190e-182
Identity = 269/351 (76.64%), Postives = 306/351 (87.18%), Query Frame = 1
Query:  121 PSSRFERMKQKWKGVTNKV-EPAEVGVSYEDFEGLLKDRQVSFGRGETVRGVVVQYEHQGALVDIGAKASAYLPLREVGLVPVEEIETALSIDDSREFMVITDENEMGQVTVSIRRLEFEKAWERVQAMQTQDAVFEAEVASVNKGGAIVLVEGLRAFLPGSHLCGGLPTEEVIGQKLPFKFLEVNPELNKLVVSNRRAVLEQEMKELSRGDVVEGHIKALKPYGAFVEIRGMSGLLHISQISFDRIEDLSVILTPGMKVKCMIIDHDKVNGRIALSTKTLEPEPGDMLRDPQKVFDLAEDTAAKYHERMEAERRAREEAAKSIVMGLGDGLDNFDSDVLAGIADGIESVL 1170
            P+S FE+MK +WKG   ++ + AE   SY+ F  +L ++QVSF RGETV GVVVQYE +G LVDIGAKASAYLPLRE  LVP E+IE   +IDDS EFMVI+DENEMGQVT+S+RRLEFEKAW+RV  M   D VF+AEV +VNKGGAIVLVEGLRAFLPGSHLCGG+P+EE++G+ LPFKFLEVN E NKLVVSNRRAV+E EM+EL+RGDVVEG IKA+KPYGAFVEIRGMSGLLHISQIS+DRIEDL  I+  GM VKCMIIDHDKV GRIALSTKTLEPEPGDML++PQKVFDLAE+TAAKYHERMEAER+AREEAAK IVMGLGDGLD+FD+DVLAGI DGI+SVL
Sbjct:    1 PTSHFEKMKMRWKGPPKRIFDTAEDDESYQQFADMLSEQQVSFNRGETVTGVVVQYEQRGLLVDIGAKASAYLPLREAALVPCEDIEALFNIDDSVEFMVISDENEMGQVTLSVRRLEFEKAWQRVDDMHKADTVFDAEVVAVNKGGAIVLVEGLRAFLPGSHLCGGVPSEELVGRMLPFKFLEVNSETNKLVVSNRRAVVETEMQELARGDVVEGFIKAIKPYGAFVEIRGMSGLLHISQISYDRIEDLGAIVQVGMAVKCMIIDHDKVAGRIALSTKTLEPEPGDMLKNPQKVFDLAEETAAKYHERMEAERKAREEAAKVIVMGLGDGLDSFDTDVLAGITDGIDSVL 351          
BLAST of mRNA_P-wetherbeei_contig15.2.1 vs. uniprot
Match: D7FRA4_ECTSI (Plastid ribosomal protein S1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA4_ECTSI)

HSP 1 Score: 505 bits (1300), Expect = 6.570e-172
Identity = 249/350 (71.14%), Postives = 303/350 (86.57%), Query Frame = 1
Query:  121 PSSRFERMKQKWKGVTNKVEPAEVGVSYEDFEGLLKDRQVSFGRGETVRGVVVQYEHQGALVDIGAKASAYLPLREVGLVPVEEIETALSIDDSREFMVITDENEMGQVTVSIRRLEFEKAWERVQAMQTQDAVFEAEVASVNKGGAIVLVEGLRAFLPGSHLCGGLPTEEVIGQKLPFKFLEVNPELNKLVVSNRRAVLEQEMKELSRGDVVEGHIKALKPYGAFVEIRGMSGLLHISQISFDRIEDLSVILTPGMKVKCMIIDHDKVNGRIALSTKTLEPEPGDMLRDPQKVFDLAEDTAAKYHERMEAERRAREEAAKSIVMGLGDGLDNFDSDVLAGIADGIESVL 1170
            P +RF+++K ++KGVT  ++ +E   +YEDF+ LL D +VSF RGE V+G V+Q+E  GAL+DIGAKA+AY+P RE  L  VE +E  L +D++ + M+I+DENEMGQV VSIRR+++EKAW +V+ MQ +D VFE  + +VN+GGAIVLVEGLR FLPGSH+CGGLPTE+ +G+ + +KFLEVN E +KLVVSNRRAVLEQEMKELSRGDVVEGH+KA+KPYGAFVEIRGMSGLLHISQISFDRIEDL  I+  GMK+KCMIIDHDKVNGRIALSTKTLEPEPGDM+++PQKV+D+AE TAAKYH+RME ER+ARE+AAKSIVMGLGDGLD+FDSDVLAGIADGIESVL
Sbjct:   79 PPNRFDKIKAQYKGVTTALDLSEETAAYEDFQTLLTDNKVSFERGEIVKGTVIQFEPSGALIDIGAKATAYMPAREASLDEVESMEGLLELDETMDVMIISDENEMGQVQVSIRRIQYEKAWSKVEDMQAEDVVFEGPIIAVNRGGAIVLVEGLRGFLPGSHMCGGLPTEDAVGKVMKYKFLEVNAENSKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSIMQMGMKLKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAEATAAKYHQRMEHERKAREDAAKSIVMGLGDGLDSFDSDVLAGIADGIESVL 428          
BLAST of mRNA_P-wetherbeei_contig15.2.1 vs. uniprot
Match: A0A7S2BGG1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BGG1_9STRA)

HSP 1 Score: 447 bits (1149), Expect = 1.600e-149
Identity = 220/332 (66.27%), Postives = 272/332 (81.93%), Query Frame = 1
Query:  121 PSSRFERMKQKWKGVTNKVEPAEVGVSYEDFEGLLKDRQVSFGRGETVRGVVVQYEHQGALVDIGAKASAYLPLREVGLVPVEEIETALSIDDSREFMVITDENEMGQVTVSIRRLEFEKAWERVQAMQTQDAVFEAEVASVNKGGAIVLVEGLRAFLPGSHLCGGLPTEEVIGQKLPFKFLEVNPELNKLVVSNRRAVLEQEMKELSRGDVVEGHIKALKPYGAFVEIRGMSGLLHISQISFDRIEDLSVILTPGMKVKCMIIDHDKVNGRIALSTKTLEPEPGDMLRDPQKVFDLAEDTAAKYHERMEAERRAREEAAKSIVMGLGDGLD 1116
            P S+FER++ +WKG    V+  + G SY+ FE  L D   +F RG+ + G VVQYE+QGALVDIGAK++A++PLRE  L+P  ++ TA+SID++R+F +I++E+E GQ+ VSIRRLEF+ AW++V A Q +D  F+ EV  VN+GGAIV V GLRAFLPGSHLCG +P+EE+IGQ    KFLEVN E NKLVVSNRRAV+E +M+ELSRGDVV+G +KA+KPYGAFVEI GMSGLLHISQIS+DRIEDLS ++     +KCMIIDHDKVNGRIALSTKTLEPEPGDML+DP+ VF+ AE+TAAKYHERMEAERRAREEAAK IVMGLG+ L+
Sbjct:   55 PMSKFERLQSRWKGEPRPVDETKAGFSYDAFEAGLGDTSCAFARGDVIPGKVVQYEYQGALVDIGAKSAAFMPLREAALIPDGDVATAVSIDETRDFQIISEEDENGQLLVSIRRLEFQNAWDKVLASQVEDKAFDGEVIGVNRGGAIVNVHGLRAFLPGSHLCGAIPSEEIIGQSFRLKFLEVNQETNKLVVSNRRAVVEDQMRELSRGDVVQGVVKAIKPYGAFVEIAGMSGLLHISQISYDRIEDLSTVVELNSLIKCMIIDHDKVNGRIALSTKTLEPEPGDMLKDPKMVFEKAEETAAKYHERMEAERRAREEAAKDIVMGLGEDLE 386          
BLAST of mRNA_P-wetherbeei_contig15.2.1 vs. uniprot
Match: A0A7S2SEK7_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEK7_9STRA)

HSP 1 Score: 436 bits (1122), Expect = 1.770e-145
Identity = 214/355 (60.28%), Postives = 277/355 (78.03%), Query Frame = 1
Query:  121 PSSRFERMKQKWKGVTNKVEPAEVGVSYEDFEGLLKDRQVSFGRGETVRGVVVQYEHQGALVDIGAKASAYLPLREVGLVPVEEIETALSIDDSREFMVITDENEMGQVTVSIRRLEFEKAWERVQAMQTQDAVFEAEVASVNKGGAIVLVEGLRAFLPGSHLCGGLPTEEVIGQKLPFKFLEVNPELNKLVVSNRRAVLEQEMKELSRGDVVEGHIKALKPYGAFVEIRGMSGLLHISQISFDRIEDLSVILTPGMKVKCMIIDHDKVNGRIALSTKTLEPEPGDMLRDPQKVFDLAEDTAAKYHERMEAERRAREEAAKSIVMGLGDGLDNFDSDVLAGIADGIESVLNPTAT 1185
            P ++++RM   WKG        + G  Y++F   L+ +   F RG+ + G VVQ++ QGALVDIGAKA+A++P+RE  L+PV ++   L I +SREF +I+DE++ GQ+ VS+RRLEF+KAW+ + ++Q++D   + +V  VN+GGAIV V GLRAFLPGSHLCG LPT+++IGQ L  KFLEVN E NK++VSNRRAV+E +M+EL+RGDVV+G +KA+KPYGAFVEI GMSGLLHISQIS+DRI+DLS I+ P   +KCMIIDHDKVNGRIALSTKTLEPEPGDM++D Q+VFDLAE+TAAKYHERMEAER+AREEAAK IVMGLGD LD+     L G A  +  +L+P  +
Sbjct:   51 PLTKWDRMSTNWKGARRTANLDKAGFGYDEFSTFLEGQDYKFARGDVITGTVVQFDFQGALVDIGAKAAAFMPIREASLIPVSDVGEVLDIHESREFQIISDEDDQGQLQVSLRRLEFQKAWDHIMSIQSEDKALDCDVLGVNRGGAIVSVHGLRAFLPGSHLCGVLPTDDIIGQTLKVKFLEVNQENNKIIVSNRRAVVEDQMQELARGDVVQGVVKAIKPYGAFVEISGMSGLLHISQISYDRIDDLSTIIQPNTIIKCMIIDHDKVNGRIALSTKTLEPEPGDMMKDSQRVFDLAEETAAKYHERMEAERKAREEAAKDIVMGLGDDLDS----TLPG-ASPLGDILSPATS 400          
BLAST of mRNA_P-wetherbeei_contig15.2.1 vs. uniprot
Match: A0A7S2H459_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H459_9STRA)

HSP 1 Score: 430 bits (1106), Expect = 5.800e-143
Identity = 216/360 (60.00%), Postives = 281/360 (78.06%), Query Frame = 1
Query:  127 SRFERMKQKWKGVTNKVEPAEVGVSYEDFEGLLKDRQVSFGRGETVRGVVVQYEHQGALVDIGAKASAYLPLREVGLVPVE--EIETALSIDDSREFMVITDENEMGQVTVSIRRLEFEKAWERVQAMQTQDAVFEAEVASVNKGGAIVLVEGLRAFLPGSHLCGGLPTEEVIGQKLPFKFLEVNPELNKLVVSNRRAVLEQEMKELSRGDVVEGHIKALKPYGAFVEIRGMSGLLHISQISFDRIEDLSVILTPGMKVKCMIIDHDKVNGRIALSTKTLEPEPGDMLRDPQKVFDLAEDTAAKYHERMEAERRAREEAAKSIVMGLGDGLDNF---------DSDVLAGIADGIESVLN 1173
            +RF+R+K+ +KG    +    +  SY +F+  ++    +F R + V+G VVQY++ G +VDIGAKASA+LP+ E  LV  +  +IE+ + ID  R+F +I++E+E GQ+ VS+RR+++ +AW++V AM   D VFEA    VN+GGAI LVEGLRAFLPGSHL G LPTE++IGQ LP KFLEVN E NKLVVSNRRAV+E++M +LSRGD++ G +KALKPYGAFVE+ GMSGLLHISQIS+DRI+DL  +L PG +VKCMIIDHDKVNGRIALSTKTLEPEPGDMLRDP +V+D+AE+TAA+YHERMEAER+AREEAAK IV+GLGD LD+          DSD LA ++D ++S+L+
Sbjct:   59 TRFDRLKKSYKGPKIDLSDEGLDFSYGEFDEAVEATDYAFNRNDVVKGTVVQYDNGGCIVDIGAKASAFLPINEAALVLEQGAQIESVIDIDQERDFQIISEEDENGQLLVSVRRIQYREAWDKVVAMNADDGVFEATCVGVNRGGAICLVEGLRAFLPGSHLTGQLPTEDLIGQTLPLKFLEVNQEANKLVVSNRRAVVEEQMADLSRGDIINGIVKALKPYGAFVEVGGMSGLLHISQISYDRIDDLEKVLQPGDQVKCMIIDHDKVNGRIALSTKTLEPEPGDMLRDPARVYDMAEETAARYHERMEAERKAREEAAKDIVLGLGDSLDDLTGDGDGEGGDSDPLADVSDNLDSLLS 418          
BLAST of mRNA_P-wetherbeei_contig15.2.1 vs. uniprot
Match: A0A7S2S0K1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S0K1_9STRA)

HSP 1 Score: 427 bits (1099), Expect = 5.180e-142
Identity = 220/362 (60.77%), Postives = 278/362 (76.80%), Query Frame = 1
Query:  127 SRFERMKQKWKG-VTNKVEPAEVGVSYEDFEGLLKDRQVSFGRGETVRGVVVQYEHQGALVDIGAKASAYLPLREVGLVPVE--EIETALSIDDSREFMVITDENEMGQVTVSIRRLEFEKAWERVQAMQTQDAVFEAEVASVNKGGAIVLVEGLRAFLPGSHLCGGLPTEEVIGQKLPFKFLEVNPELNKLVVSNRRAVLEQEMKELSRGDVVEGHIKALKPYGAFVEIRGMSGLLHISQISFDRIEDLSVILTPGMKVKCMIIDHDKVNGRIALSTKTLEPEPGDMLRDPQKVFDLAEDTAAKYHERMEAERRAREEAAKSIVMGLGDGLD--NFDSDV--------LAGIADGIESVLN 1173
            +RF+R+K+ WKG +  KV    +   Y DF+  +      F R   V G VVQ+E+ G +VDIGAKASA+LP+ E  LV  +   IET + +D   +  +I++E+E GQ+ VS+RR+++ +AW++V+ +QT D VF+A V +VN+GGAI LVEGLRAFLPGSHL G LPTE++IGQ LP KFLEVN E NKLVVSNRRAV+EQ+M +LSRGD++ G +KALKPYGAFVE+ GMSGLLHISQIS+DRI+DL  +L PG +VKCMIIDHDKVNGRIALSTKTLEPEPGDMLRD  KVF+LAE+TAAKYHERMEAER+AREE+AKSIV+ LGD LD  N DSD         LA ++D ++S+L+
Sbjct:   50 TRFDRLKKNWKGAMPEKVSTENLNFDYSDFDAAVASVSYDFARNSVVSGTVVQFENAGCIVDIGAKASAFLPINEAALVQEQGDSIETLVELDKEMQVQIISEEDENGQLLVSVRRIQYREAWDKVRTLQTTDDVFDATVIAVNRGGAICLVEGLRAFLPGSHLTGQLPTEDIIGQSLPLKFLEVNQEDNKLVVSNRRAVVEQQMADLSRGDIINGMVKALKPYGAFVEVGGMSGLLHISQISYDRIDDLEKVLQPGQQVKCMIIDHDKVNGRIALSTKTLEPEPGDMLRDSAKVFELAEETAAKYHERMEAERKAREESAKSIVVSLGDTLDDLNNDSDADGEDAEDPLASVSDNLDSLLS 411          
BLAST of mRNA_P-wetherbeei_contig15.2.1 vs. uniprot
Match: A0A7S4QHK0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QHK0_9STRA)

HSP 1 Score: 427 bits (1097), Expect = 4.430e-141
Identity = 215/363 (59.23%), Postives = 280/363 (77.13%), Query Frame = 1
Query:  118 PPSSRFERMKQKWKGVTNKVEPAEVGVSYEDFEGLLKDRQVSFGRGETVRGVVVQYEHQGALVDIGAKASAYLPLREVGLV--PVEEIETALSIDDSREFMVITDENEMGQVTVSIRRLEFEKAWERVQAMQTQDAVFEAEVASVNKGGAIVLVEGLRAFLPGSHLCGGLPTEEVIGQKLPFKFLEVNPELNKLVVSNRRAVLEQEMKELSRGDVVEGHIKALKPYGAFVEIRGMSGLLHISQISFDRIEDLSVILTPGMKVKCMIIDHDKVNGRIALSTKTLEPEPGDMLRDPQKVFDLAEDTAAKYHERMEAERRAREEAAKSIVMGLGDGLDNFDS---------DVLAGIADGIESVLN 1173
            P  SRF+R+K  +KG         +  SY+DF+  ++    +F R + V+G VVQY++ G +VDIGAKASA+LP  E  L+    ++IE  +++D+ R F +I++E+E GQ+ VS+RR+++ +AW+ V A   +D VFEA V  VN+GGAI LV+GLRAFLPGSHL G LPTE++IGQ LP KFLEVN E NKLVVSNRRAV+E++M +LSRGD++ G +KALKPYGAFVE+ GMSGLLHISQIS+DRI+DL  +L PG +VKCMIIDHDKVNGRIALSTKTLEPEPGDMLRDP++VF++AE+TAA+YHERMEAER+AREEAAK IV+GLGD LD+  S         D LA ++D ++S+L+
Sbjct:   92 PQLSRFDRLKAAYKGPQIVKNDEGLDFSYDDFDSAVEATDYAFNRNDVVKGTVVQYDNGGCIVDIGAKASAFLPTAEASLIMNQGDDIEDLINVDEERNFQIISEEDENGQLLVSVRRIQYREAWDTVIAKNAEDGVFEATVVGVNRGGAICLVDGLRAFLPGSHLTGQLPTEDLIGQTLPLKFLEVNQEANKLVVSNRRAVVEEQMSDLSRGDIITGIVKALKPYGAFVEVGGMSGLLHISQISYDRIDDLEKVLQPGTQVKCMIIDHDKVNGRIALSTKTLEPEPGDMLRDPKRVFEMAEETAARYHERMEAERKAREEAAKDIVLGLGDSLDDLTSSSDDDSEGSDPLADVSDNLDSLLS 454          
BLAST of mRNA_P-wetherbeei_contig15.2.1 vs. uniprot
Match: A0A7S3QC88_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QC88_9STRA)

HSP 1 Score: 424 bits (1089), Expect = 9.310e-141
Identity = 220/359 (61.28%), Postives = 276/359 (76.88%), Query Frame = 1
Query:  118 PPSSRFERMKQKWKGVTNKVEPAEVGVSYEDFEGLLKDRQVSFGRGETVRGVVVQYEHQGALVDIGAKASAYLPLREVGLVPVE--EIETALSIDDSREFMVITDENEMGQVTVSIRRLEFEKAWERVQAMQTQDAVFEAEVASVNKGGAIVLVEGLRAFLPGSHLCGGLPTEEVIGQKLPFKFLEVNPELNKLVVSNRRAVLEQEMKELSRGDVVEGHIKALKPYGAFVEIRGMSGLLHISQISFDRIEDLSVILTPGMKVKCMIIDHDKVNGRIALSTKTLEPEPGDMLRDPQKVFDLAEDTAAKYHERMEAERRAREEAAKSIVMGLGDGL-----DNFDSDVLAGIADGIESVLN 1173
            P  SRF+R+K+ +KG    V    +  SY+DF   + +   SF R + V+G VVQYE+ G +VDIGAK+SA+LP +E  L   +   +E+ + +D   +F +I++E+E GQ+ VS+RR+++ +AWE+V A QT+D VFEAEV +VN+GGAI LVEGLRAFLPGSHL G LPTE++IGQ L  KFLEVN E NKLVVSNRRAV+EQ+M  LSRGD++ G +KALKPYGAFVE+ GMSGLLHISQIS+DRIEDL  +L PG +VKCMIIDHDKVNGRIALSTKTLEPEPGDML D  KVF+LAE+TA KYHERMEAER+AREEA K IVMGLGD L     D+   D LA ++D ++S+L+
Sbjct:   36 PIMSRFDRLKKNYKGPQVVVSSEGLDFSYDDFADAVANTDYSFNRNDVVKGTVVQYENGGCVVDIGAKSSAFLPTQESSLFMPQGATLESLVDLDTEMDFQIISEEDENGQLLVSVRRIQYRQAWEKVIAQQTEDEVFEAEVVAVNRGGAICLVEGLRAFLPGSHLTGQLPTEDLIGQTLALKFLEVNQEDNKLVVSNRRAVVEQQMSNLSRGDIIGGVVKALKPYGAFVEVGGMSGLLHISQISYDRIEDLEKVLQPGQQVKCMIIDHDKVNGRIALSTKTLEPEPGDMLTDSAKVFELAEETAKKYHERMEAERKAREEATKDIVMGLGDSLADLTSDDEGEDPLADVSDNLDSLLS 394          
BLAST of mRNA_P-wetherbeei_contig15.2.1 vs. uniprot
Match: A0A7S1FV14_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FV14_9STRA)

HSP 1 Score: 415 bits (1067), Expect = 2.530e-137
Identity = 213/354 (60.17%), Postives = 273/354 (77.12%), Query Frame = 1
Query:  118 PPSSRFERMKQKWKGVTNKVEPAEVGVSYEDFEGLLKDRQVSFGRGETVRGVVVQYEHQGALVDIGAKASAYLPLREVGLVP--VEEIETALSIDDSREFMVITDENEMGQVTVSIRRLEFEKAWERVQAMQTQDAVFEAEVASVNKGGAIVLVEGLRAFLPGSHLCGGLPTEEVIGQKLPFKFLEVNPELNKLVVSNRRAVLEQEMKELSRGDVVEGHIKALKPYGAFVEIRGMSGLLHISQISFDRIEDLSVILTPGMKVKCMIIDHDKVNGRIALSTKTLEPEPGDMLRDPQKVFDLAEDTAAKYHERMEAERRAREEAAKSIVMGLGDGLDNFDSDVLAGIADGIESVLN 1173
            P  +RF+R+K+ WKG    V+ + V  SY DFE +L +  V+F R + V+G VVQYE  GAL+DIGAK+SAYLPL E  L+    + IE  + +D   EF +I+DE+E GQ+ VS +R+++  AWE+V ++Q  D VF+A+V +VN+GGAI LVEGLRAFLPGSHL G +P + +IG+ LP KFLEVN E NKLVVSNRRAV+E +M +LSRGD++ G I ALKPYGAFV++ GMSGLLHISQIS+DRI+DLS +  PG  VKCMIIDHDKVNGRIALSTKTLEPEPGDML+D  +VF++AE+TAAKYHERMEAER AREEAA+ I +GLGD LD+     +  ++D ++SVL+
Sbjct:   54 PQLTRFDRLKKSWKGPMPNVDTSGVDFSYGDFEAILDESLVAFNRNDIVKGTVVQYEKAGALIDIGAKSSAYLPLPEAALLQGQTDGIEDLVELDSEHEFQIISDEDENGQLLVSRKRIQYAAAWEKVASLQVTDDVFDAKVVAVNRGGAICLVEGLRAFLPGSHLTGRIPDDGLIGETLPLKFLEVNQENNKLVVSNRRAVVEAQMADLSRGDLISGVILALKPYGAFVQVGGMSGLLHISQISYDRIDDLSAVFNPGDAVKCMIIDHDKVNGRIALSTKTLEPEPGDMLKDSGRVFEMAEETAAKYHERMEAERVAREEAAREIGLGLGDDLDD-----IGEMSDDLDSVLS 402          
BLAST of mRNA_P-wetherbeei_contig15.2.1 vs. uniprot
Match: K0SKF0_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SKF0_THAOC)

HSP 1 Score: 409 bits (1051), Expect = 2.330e-135
Identity = 209/359 (58.22%), Postives = 270/359 (75.21%), Query Frame = 1
Query:  115 PPPSSRFERMKQKWKG----VTNKVEPAEVGVSYEDFEGLLKDRQVSFGRGETVRGVVVQYEHQGALVDIGAKASAYLPLREVGLVPVE--EIETALSIDDSREFMVITDENEMGQVTVSIRRLEFEKAWERVQAMQTQDAVFEAEVASVNKGGAIVLVEGLRAFLPGSHLCGGLPTEEVIGQKLPFKFLEVNPELNKLVVSNRRAVLEQEMKELSRGDVVEGHIKALKPYGAFVEIRGMSGLLHISQISFDRIEDLSVILTPGMKVKCMIIDHDKVNGRIALSTKTLEPEPGDMLRDPQKVFDLAEDTAAKYHERMEAERRAREEAAKSIVMGLGDGLDNFDSDVLAGIADGIESVLN 1173
            P   +RF+R+K  +KG    +++ +E  EVG SY+ FE  +     SF R + V G VVQY+  G +VDIGAK+SA+LP +E  LV  +  +IE  + +D  REF +I++E+E GQ+ VS+RR+E+ +AW++V A +  D VF+AE  SVN+GGAI LVEGLRAFLPGSHL G LP E+++GQ LP KFLEVN E NKLVVSNRRAV+E +M+ LSRGDV++G +KALKPYGAFVE+ GMSGLLHISQIS DRI DL  +L PG K+KCMIIDHDK NGRIALSTKTLEPEPGDM+RDP++V+++AE+TA  Y ER E ER+ REE+AK IV+GLGD LD    D     +D ++S+L+
Sbjct:   14 PKQMTRFDRIKANYKGPKVEISSGIED-EVGFSYDSFEEAVSATDYSFNRNDVVTGTVVQYDKGGCVVDIGAKSSAFLPQQEAALVQEQGAQIENLIELDAEREFQIISEEDENGQLLVSVRRIEYRQAWDKVVAKRDTDEVFDAECVSVNRGGAIFLVEGLRAFLPGSHLTGRLPDEDLVGQTLPLKFLEVNQEDNKLVVSNRRAVVETQMESLSRGDVIDGLVKALKPYGAFVEVGGMSGLLHISQISMDRINDLEAVLQPGQKIKCMIIDHDKANGRIALSTKTLEPEPGDMIRDPERVYEMAEETAKVYLERQEQERKKREESAKDIVLGLGDALDELTGDSAEDSSDNLDSILS 371          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z197_9STRA2.190e-18276.64Plastid ribosomal protein S1 (Fragment) n=2 Tax=Tr... [more]
D7FRA4_ECTSI6.570e-17271.14Plastid ribosomal protein S1 n=1 Tax=Ectocarpus si... [more]
A0A7S2BGG1_9STRA1.600e-14966.27Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2SEK7_9STRA1.770e-14560.28Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S2H459_9STRA5.800e-14360.00Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2S0K1_9STRA5.180e-14260.77Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S4QHK0_9STRA4.430e-14159.23Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S3QC88_9STRA9.310e-14161.28Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A7S1FV14_9STRA2.530e-13760.17Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
K0SKF0_THAOC2.330e-13558.22Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15contigP-wetherbeei_contig15:8347..10480 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FRA4
PFAMsS1
Model size1860
Max annot lvl2759|Eukaryota
KEGG koko:K02945
KEGG Pathwayko03010,map03010
KEGG ModuleM00178
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009579,GO:0009719,GO:0009725,GO:0009735,GO:0010033,GO:0016020,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0097159,GO:1901363
Exons2
Evalue9.38e-176
EggNOG OGsCOG0539@1|root,2QUY8@2759|Eukaryota
Ec32 ortholog descriptionPlastid ribosomal protein S1
Ec32 orthologEc-26_002420.1
DescriptionRNA binding
Cds size1104
COG categoryJ
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186040.0311794-UTR-P-wetherbeei_contig15:8346..84391683186040.0311794-UTR-P-wetherbeei_contig15:8346..8439Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig15 8347..8439 +
1683186040.072271-UTR-P-wetherbeei_contig15:9817..104801683186040.072271-UTR-P-wetherbeei_contig15:9817..10480Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig15 9818..10480 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186040.0449543-CDS-P-wetherbeei_contig15:8439..93451683186040.0449543-CDS-P-wetherbeei_contig15:8439..9345Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15 8440..9345 +
1683186040.058337-CDS-P-wetherbeei_contig15:9619..98171683186040.058337-CDS-P-wetherbeei_contig15:9619..9817Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15 9620..9817 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15.2.1prot_P-wetherbeei_contig15.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15 8440..9817 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15.2.1

>prot_P-wetherbeei_contig15.2.1 ID=prot_P-wetherbeei_contig15.2.1|Name=mRNA_P-wetherbeei_contig15.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=368bp
MSTRTKSPPPSSRFERMKQKWKGVTNKVEPAEVGVSYEDFEGLLKDRQVS
FGRGETVRGVVVQYEHQGALVDIGAKASAYLPLREVGLVPVEEIETALSI
DDSREFMVITDENEMGQVTVSIRRLEFEKAWERVQAMQTQDAVFEAEVAS
VNKGGAIVLVEGLRAFLPGSHLCGGLPTEEVIGQKLPFKFLEVNPELNKL
VVSNRRAVLEQEMKELSRGDVVEGHIKALKPYGAFVEIRGMSGLLHISQI
SFDRIEDLSVILTPGMKVKCMIIDHDKVNGRIALSTKTLEPEPGDMLRDP
QKVFDLAEDTAAKYHERMEAERRAREEAAKSIVMGLGDGLDNFDSDVLAG
IADGIESVLNPTATDRA*
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mRNA from alignment at P-wetherbeei_contig15:8347..10480+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15.2.1 ID=mRNA_P-wetherbeei_contig15.2.1|Name=mRNA_P-wetherbeei_contig15.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2134bp|location=Sequence derived from alignment at P-wetherbeei_contig15:8347..10480+ (Phaeothamnion wetherbeei SAG_119_79)
GCGGCCTTTGCGCCGTCGTCGGCGTTCCTGGGCCACGCGCCCGGCACTCA ATGGGTGGATGCGTCATGTGGATGCGCGGCGGCCGCAGTCTCCATGTCGA CGCGGACCAAGTCGCCGCCACCGTCGTCTCGGTTCGAGCGCATGAAGCAG AAGTGGAAGGGCGTGACGAACAAGGTGGAGCCGGCGGAAGTGGGGGTCTC GTATGAGGACTTTGAGGGGCTCCTGAAGGACCGACAAGTCTCCTTCGGGC GCGGCGAGACGGTGCGCGGCGTCGTGGTGCAATATGAGCACCAGGGCGCC CTCGTCGACATCGGCGCCAAGGCGTCGGCGTACCTGCCCCTGCGCGAGGT AGGACTCGTGCCCGTGGAGGAAATCGAGACGGCGCTGTCGATTGACGACT CCCGCGAGTTCATGGTCATTACCGACGAAAACGAGATGGGCCAGGTCACC GTCTCGATCCGCCGGCTGGAATTTGAGAAGGCGTGGGAGCGGGTGCAGGC CATGCAGACGCAGGATGCCGTCTTTGAGGCCGAGGTGGCCAGCGTCAACA AGGGCGGCGCCATCGTCCTCGTTGAGGGTCTCCGCGCCTTCCTACCCGGC TCGCACCTCTGCGGCGGGCTGCCGACGGAGGAGGTCATTGGACAGAAGCT GCCGTTCAAGTTCCTGGAGGTGAACCCCGAGCTCAACAAGCTCGTCGTAT CCAACCGGCGCGCGGTGCTCGAGCAGGAGATGAAGGAGCTATCGCGCGGC GACGTCGTGGAGGGCCACATCAAGGCACTCAAGCCGTACGGCGCCTTCGT GGAGATCCGTGGTATGTCGGGCTTGCTGCACATCTCGCAGATCTCGTTCG ACCGCATCGAGGACCTTTCCGTCATCCTGACGCCGGGCATGAAGGTCAAG TGCATGATCATCGACCACGACAAGGTCAACGGCCGCATCGCCCTCAGCAC CAAGACACTCGAGCCCGAGCCCGGCGACATGCTCCGCGACCCCCAAAAGG TGCGTTAGTTTCTCTGGATGGGATTCAAGTAGGTCCGGTTTCAGTTTACA GCTCCTAGAGCTAATTTCTCCTGCTTTCTTTTCTTAAAGTTTCATTAATC TGAAATCGGCAAAACCAGTCAGCGAACCCCTTTTTCAATTGGCCCAAGGT GAAGTTTTTCTTTGCAGCCATACTCATTTGAATCAGGCTTTCGTAATTTG TTTCTTCCTCCTAATATGTTTCATTATTTACGAAGTCTGCACCTTCCCCC CGCGCTTCCTAAACTTCAAATAGGTGTTTGACCTGGCGGAGGACACGGCC GCAAAGTACCACGAGCGGATGGAGGCGGAGCGGCGAGCGCGGGAGGAGGC CGCCAAGTCCATCGTGATGGGGCTCGGCGACGGCCTCGACAACTTCGACT CGGACGTGCTCGCCGGCATCGCCGATGGCATCGAGTCGGTGCTCAACCCC ACCGCCACGGATCGCGCCTAAGAGAGAGAAAAAGGCGCGATTGAGCCAGA AGAGGGAGAACGGGAAACAAGGGGCGGCGCGCTGGGGAGAAGGAGAAGGC GGCGGCAGCTCGGAAGATTTCTCCCTCGTCCATTCCTTCTAGTCTCCTCC TTCCTACCGTCATCGTCGGCGCTGCCGCCGTCGTTTTCTGACGACGGCGG CGCCGGCAGGCTGCGGCGTCGGCGCTTTCCCCCTCGGCTGGCACGTTGCC GCGTCGTTTTTGTCGGCGGCTGGCGGCAGTCGCTGCCGTGGCGGCGGCAC TGTCGAAATCCCGCCGGCTTTGCTGTACCGGCGGCCAGCGGCGAGCGAGT CAGTTTGGGATGCCGCGTGGCGCGACGTCGTATGCTCGCGCGGCGGCGTT GGCGGCGGTGCAGTTGACTGCAGGAGCGGCGGGCAATTCGGAGTAGGGAA CGGGGGAACTGCTTGGAACGGGGAGTAACTTGTGTGCGGTGGAGCTGCGT CGTTGTCGTCGGGCGCAGCTGGATGTGGGTGGCGGCGCAGTGAGGTGGGC TTTGCGTTTGCTTTTCCCGCGCTGCGCCGTCCGCACGCTGCGCGTTGTCG CCGCTCGCAGCCGGCACACCGCCCGGTGCTTATAAAGATTTTTACGCCTC GTGTACCACTGCGGTCCGACCCGGCGTGCCTCTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15:8347..10480+

>mRNA_P-wetherbeei_contig15.2.1 ID=mRNA_P-wetherbeei_contig15.2.1|Name=mRNA_P-wetherbeei_contig15.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1104bp|location=Sequence derived from alignment at P-wetherbeei_contig15:8347..10480+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGACGCGGACCAAGTCGCCGCCACCGTCGTCTCGGTTCGAGCGCAT
GAAGCAGAAGTGGAAGGGCGTGACGAACAAGGTGGAGCCGGCGGAAGTGG
GGGTCTCGTATGAGGACTTTGAGGGGCTCCTGAAGGACCGACAAGTCTCC
TTCGGGCGCGGCGAGACGGTGCGCGGCGTCGTGGTGCAATATGAGCACCA
GGGCGCCCTCGTCGACATCGGCGCCAAGGCGTCGGCGTACCTGCCCCTGC
GCGAGGTAGGACTCGTGCCCGTGGAGGAAATCGAGACGGCGCTGTCGATT
GACGACTCCCGCGAGTTCATGGTCATTACCGACGAAAACGAGATGGGCCA
GGTCACCGTCTCGATCCGCCGGCTGGAATTTGAGAAGGCGTGGGAGCGGG
TGCAGGCCATGCAGACGCAGGATGCCGTCTTTGAGGCCGAGGTGGCCAGC
GTCAACAAGGGCGGCGCCATCGTCCTCGTTGAGGGTCTCCGCGCCTTCCT
ACCCGGCTCGCACCTCTGCGGCGGGCTGCCGACGGAGGAGGTCATTGGAC
AGAAGCTGCCGTTCAAGTTCCTGGAGGTGAACCCCGAGCTCAACAAGCTC
GTCGTATCCAACCGGCGCGCGGTGCTCGAGCAGGAGATGAAGGAGCTATC
GCGCGGCGACGTCGTGGAGGGCCACATCAAGGCACTCAAGCCGTACGGCG
CCTTCGTGGAGATCCGTGGTATGTCGGGCTTGCTGCACATCTCGCAGATC
TCGTTCGACCGCATCGAGGACCTTTCCGTCATCCTGACGCCGGGCATGAA
GGTCAAGTGCATGATCATCGACCACGACAAGGTCAACGGCCGCATCGCCC
TCAGCACCAAGACACTCGAGCCCGAGCCCGGCGACATGCTCCGCGACCCC
CAAAAGGTGTTTGACCTGGCGGAGGACACGGCCGCAAAGTACCACGAGCG
GATGGAGGCGGAGCGGCGAGCGCGGGAGGAGGCCGCCAAGTCCATCGTGA
TGGGGCTCGGCGACGGCCTCGACAACTTCGACTCGGACGTGCTCGCCGGC
ATCGCCGATGGCATCGAGTCGGTGCTCAACCCCACCGCCACGGATCGCGC
CTAA
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