mRNA_P-wetherbeei_contig14974.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14974.1.1
Unique NamemRNA_P-wetherbeei_contig14974.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14974.1.1 vs. uniprot
Match: A0A7X9AGP1_9BURK (FHA domain-containing protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X9AGP1_9BURK)

HSP 1 Score: 109 bits (273), Expect = 5.570e-27
Identity = 50/78 (64.10%), Postives = 60/78 (76.92%), Query Frame = 1
Query:  100 IDLALKGQTVVIGREEGDIVLEGDSASSRVHARITFEEGEHWIEDLESTNGTWVNRHRIRKKVELHRGDTVDIGESRF 333
            IDL L GQ V+IGREEGD+VL  D+A S  HAR+  E+G +W+EDL STNGTWVNRHR+ +KVELHRGD V  G +R 
Sbjct:  201 IDLLLNGQPVLIGREEGDLVLPQDTAVSYSHARLFMEDGTYWVEDLNSTNGTWVNRHRLSRKVELHRGDEVQAGNTRL 278          
BLAST of mRNA_P-wetherbeei_contig14974.1.1 vs. uniprot
Match: A0A355TVG2_9BACT (FHA domain-containing protein n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TVG2_9BACT)

HSP 1 Score: 77.4 bits (189), Expect = 5.170e-16
Identity = 44/107 (41.12%), Postives = 64/107 (59.81%), Query Frame = 1
Query:   31 PTEPVQVIDAAGSVAALICTARNIDLALKGQTVVIGREEGDIVLEGDSASSRVHARITFE--EGEHWIEDLESTNGTWVNRHRI--RKKVELHRGDTVDIGESRFEV 339
            PT+P+ + +A  S   L   A      L+G   VIGRE GDIVL  DS+ S  HAR+      G +++EDL STNG+W+N +R+   +K EL RGD + +G++  +V
Sbjct:   13 PTKPMTISEADYSNLQLSLEALGKLYPLQGSVTVIGRESGDIVLSSDSSVSYTHARVVKSPLNGHYFLEDLGSTNGSWLNGNRLVSNQKYELKRGDFIKLGQTSIKV 119          
BLAST of mRNA_P-wetherbeei_contig14974.1.1 vs. uniprot
Match: A0A832B795_9ACTN (FHA domain-containing protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A832B795_9ACTN)

HSP 1 Score: 70.9 bits (172), Expect = 4.380e-13
Identity = 34/75 (45.33%), Postives = 48/75 (64.00%), Query Frame = 1
Query:  118 GQTVVIGREEGDIV-LEGDSASSRVHARITFEEGEHWIEDLESTNGTWVNRHRIRKKVELHRGDTVDIGESRFEV 339
            G    +GR  G  V L+GD+ +S VHAR+   +GE W+EDL STNGT++N  R+   V++ RGD V +G +  EV
Sbjct:   81 GNETTLGRSPGCAVPLDGDTFASSVHARVYRRDGETWLEDLGSTNGTFLNGKRVAAPVQIRRGDRVKVGSTLLEV 155          
BLAST of mRNA_P-wetherbeei_contig14974.1.1 vs. uniprot
Match: A0A3N5KAS9_9ACTN (FHA domain-containing protein n=2 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A3N5KAS9_9ACTN)

HSP 1 Score: 69.7 bits (169), Expect = 1.280e-12
Identity = 34/83 (40.96%), Postives = 55/83 (66.27%), Query Frame = 1
Query:   94 RNIDLALKGQTVVIGREEG-DIVLEGDSASSRVHARITFEEGEHWIEDLESTNGTWVNRHRIRKKVELHRGDTVDIGESRFEV 339
            R+ DL    + + +GR  G  ++LEGD+  S++HAR+   +G  ++EDL STNGT VNR +++  + LH+GDT+ +G +  EV
Sbjct:   79 RSFDLT---EELTVGRAPGCQVLLEGDTFVSQLHARVFTRDGVLFVEDLGSTNGTLVNRRKLKGAIPLHQGDTLQVGRTIMEV 158          
BLAST of mRNA_P-wetherbeei_contig14974.1.1 vs. uniprot
Match: A0A538FPS4_9ACTN (FHA domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538FPS4_9ACTN)

HSP 1 Score: 69.7 bits (169), Expect = 1.390e-12
Identity = 33/75 (44.00%), Postives = 47/75 (62.67%), Query Frame = 1
Query:  118 GQTVVIGREEG-DIVLEGDSASSRVHARITFEEGEHWIEDLESTNGTWVNRHRIRKKVELHRGDTVDIGESRFEV 339
            G+ V +GR  G  + L GD+  S++HAR+   +G  W+EDL STNGT+VN  R+   V L RGD V +G +  E+
Sbjct:   87 GEEVTVGRASGCGVSLAGDTFVSQLHARLYRRDGRTWVEDLGSTNGTYVNSKRLTSPVSLRRGDRVQVGRTVLEL 161          
BLAST of mRNA_P-wetherbeei_contig14974.1.1 vs. uniprot
Match: A0A431LLG5_9BACT (FHA domain-containing protein n=1 Tax=Candidatus Melainabacteria bacterium TaxID=2052166 RepID=A0A431LLG5_9BACT)

HSP 1 Score: 70.5 bits (171), Expect = 1.910e-12
Identity = 39/79 (49.37%), Postives = 51/79 (64.56%), Query Frame = 1
Query:  112 LKGQTVVIGREEGD-IVLEGDSASSRVHARITFEEGEHWIEDLESTNGTWVNRHRIRKKVELHRGDTVDIG--ESRFEV 339
            LK   V IGR+  + +V+  D+ +SR HA ITFEEG+ W+EDL STNGT +N H + K+  L  GD V +G  E  FEV
Sbjct:  138 LKNSKVKIGRDPSNQVVIPDDTFTSRHHAWITFEEGDFWLEDLGSTNGTLLNGHPVVKRQVLSAGDKVRVGHTELTFEV 216          
BLAST of mRNA_P-wetherbeei_contig14974.1.1 vs. uniprot
Match: A0A7X9BD29_9FIRM (FHA domain-containing protein n=1 Tax=Peptococcaceae bacterium TaxID=2052179 RepID=A0A7X9BD29_9FIRM)

HSP 1 Score: 69.3 bits (168), Expect = 2.070e-12
Identity = 35/76 (46.05%), Postives = 52/76 (68.42%), Query Frame = 1
Query:  112 LKGQTVVIGR-EEGDIVLEGDSASSRVHARITFEEGEHWIEDLESTNGTWVNRHRIRKKVELHRGDTVDIGESRFE 336
            L  +  ++GR +  D+VL+   AS+R HARI +++G++WIEDL+STNGT+VN  RI     L  GD++ IG+  FE
Sbjct:   80 LNNENNLLGRGDSSDLVLQDSFASNR-HARIFYQQGQYWIEDLQSTNGTFVNEVRIEHPTVLAEGDSIRIGDFIFE 154          
BLAST of mRNA_P-wetherbeei_contig14974.1.1 vs. uniprot
Match: A0A8J7PP05_9BACT (FHA domain-containing protein n=2 Tax=Candidatus Obscuribacter TaxID=1906156 RepID=A0A8J7PP05_9BACT)

HSP 1 Score: 68.6 bits (166), Expect = 2.950e-12
Identity = 38/80 (47.50%), Postives = 52/80 (65.00%), Query Frame = 1
Query:  109 ALKGQTVVIGREEGD-IVLEGDSASSRVHARITFEEGEHWIEDLESTNGTWVNRHRIRKKVELHRGDTVDIG--ESRFEV 339
            ++K   V IGR+  + +V+  D+ +SR HA ITFE+G+ WIEDL STNGT +N H + K+  L  GD V +G  E  FEV
Sbjct:   68 SMKTSKVKIGRDPSNQVVIPDDTFTSRHHAWITFEDGDFWIEDLGSTNGTLLNGHPVVKRQVLSPGDKVRVGHTELTFEV 147          
BLAST of mRNA_P-wetherbeei_contig14974.1.1 vs. uniprot
Match: A0A7C3J9L3_9CHLR (FHA domain-containing protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C3J9L3_9CHLR)

HSP 1 Score: 69.3 bits (168), Expect = 3.040e-12
Identity = 37/73 (50.68%), Postives = 53/73 (72.60%), Query Frame = 1
Query:  112 LKGQTVVIGREEG-DIVLEGDSASSRVHARITFEEGEHWIEDLESTNGTWVNRHRIRKKVELHRGDTVDIGES 327
            L G  ++IGREEG D+VL+ D  SSR HARI+++ G+ ++EDL STNGT+VN  +I     L+ GDT+ IG++
Sbjct:   34 LVGNQMIIGREEGVDVVLQ-DPESSRRHARISWQAGQFFVEDLGSTNGTFVNGVQITAPQMLNSGDTIGIGQT 105          
BLAST of mRNA_P-wetherbeei_contig14974.1.1 vs. uniprot
Match: A0A3N2JQB7_9CELL (FHA domain-containing protein n=1 Tax=Cellulomonas sp. PhB143 TaxID=2485186 RepID=A0A3N2JQB7_9CELL)

HSP 1 Score: 68.9 bits (167), Expect = 3.900e-12
Identity = 40/105 (38.10%), Postives = 59/105 (56.19%), Query Frame = 1
Query:   28 VPTEPVQVIDAAGSVAALICTARNIDLALKGQTVVIGREEGDIVLEGDSASSRVHARITFEEGEHWIEDLESTNGTWVNRHRIRKKVELHRGDTVDIGESRFEVR 342
            VP  P +++  AG +       R   L L  QT+++GR  G  ++  D+ SS  HARI   EG  ++EDL STNGT++N  RI   VE+ +G  V IG +  E++
Sbjct:   83 VPRGPSRLVVTAGQL-------RGTSLPLSSQTIMLGRSPGCTLVLDDAFSSSRHARIFPHEGRWYLEDLGSTNGTYINDERISGTVEISQGTPVRIGRTVVELQ 180          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14974.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X9AGP1_9BURK5.570e-2764.10FHA domain-containing protein n=1 Tax=Burkholderia... [more]
A0A355TVG2_9BACT5.170e-1641.12FHA domain-containing protein n=1 Tax=bacterium UB... [more]
A0A832B795_9ACTN4.380e-1345.33FHA domain-containing protein n=1 Tax=Acidimicrobi... [more]
A0A3N5KAS9_9ACTN1.280e-1240.96FHA domain-containing protein n=2 Tax=Actinomyceti... [more]
A0A538FPS4_9ACTN1.390e-1244.00FHA domain-containing protein n=1 Tax=Actinomyceti... [more]
A0A431LLG5_9BACT1.910e-1249.37FHA domain-containing protein n=1 Tax=Candidatus M... [more]
A0A7X9BD29_9FIRM2.070e-1246.05FHA domain-containing protein n=1 Tax=Peptococcace... [more]
A0A8J7PP05_9BACT2.950e-1247.50FHA domain-containing protein n=2 Tax=Candidatus O... [more]
A0A7C3J9L3_9CHLR3.040e-1250.68FHA domain-containing protein n=1 Tax=Anaerolineae... [more]
A0A3N2JQB7_9CELL3.900e-1238.10FHA domain-containing protein n=1 Tax=Cellulomonas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14974contigP-wetherbeei_contig14974:12..356 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1449355.JQNR01000005_gene3030
Preferred namefhaB
PFAMsFHA,Yop-YscD_cpl
Model size345
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0009987,GO:0016020,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044464,GO:0050896,GO:0051301,GO:0051704,GO:0071944
Exons1
Evalue6.06e-12
EggNOG OGsCOG1716@1|root,COG1716@2|Bacteria,2GKA7@201174|Actinobacteria
Description(FHA) domain
Cds size345
COG categoryT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186039.1126223-CDS-P-wetherbeei_contig14974:11..3561683186039.1126223-CDS-P-wetherbeei_contig14974:11..356Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14974 12..356 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14974.1.1prot_P-wetherbeei_contig14974.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14974 12..356 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14974.1.1

>prot_P-wetherbeei_contig14974.1.1 ID=prot_P-wetherbeei_contig14974.1.1|Name=mRNA_P-wetherbeei_contig14974.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=115bp
TPEKPPARPVPTEPVQVIDAAGSVAALICTARNIDLALKGQTVVIGREEG
DIVLEGDSASSRVHARITFEEGEHWIEDLESTNGTWVNRHRIRKKVELHR
GDTVDIGESRFEVR*
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mRNA from alignment at P-wetherbeei_contig14974:12..356+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14974.1.1 ID=mRNA_P-wetherbeei_contig14974.1.1|Name=mRNA_P-wetherbeei_contig14974.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=345bp|location=Sequence derived from alignment at P-wetherbeei_contig14974:12..356+ (Phaeothamnion wetherbeei SAG_119_79)
ACTCCCGAAAAACCGCCCGCTCGACCCGTTCCAACCGAGCCCGTGCAGGT CATCGACGCAGCCGGCAGCGTTGCCGCCCTCATCTGCACAGCCCGCAACA TCGACCTGGCCCTCAAAGGTCAGACCGTCGTTATCGGCCGGGAAGAAGGC GATATCGTCCTGGAGGGCGACTCCGCGTCCTCTCGCGTGCACGCCCGCAT CACTTTCGAAGAGGGCGAACACTGGATTGAAGACCTCGAGTCGACCAACG GCACCTGGGTCAACCGCCACCGCATCCGCAAAAAGGTCGAGTTGCATCGC GGCGACACCGTCGATATCGGCGAGAGTCGCTTTGAAGTGCGTTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14974:12..356+

>mRNA_P-wetherbeei_contig14974.1.1 ID=mRNA_P-wetherbeei_contig14974.1.1|Name=mRNA_P-wetherbeei_contig14974.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=345bp|location=Sequence derived from alignment at P-wetherbeei_contig14974:12..356+ (Phaeothamnion wetherbeei SAG_119_79)
ACTCCCGAAAAACCGCCCGCTCGACCCGTTCCAACCGAGCCCGTGCAGGT
CATCGACGCAGCCGGCAGCGTTGCCGCCCTCATCTGCACAGCCCGCAACA
TCGACCTGGCCCTCAAAGGTCAGACCGTCGTTATCGGCCGGGAAGAAGGC
GATATCGTCCTGGAGGGCGACTCCGCGTCCTCTCGCGTGCACGCCCGCAT
CACTTTCGAAGAGGGCGAACACTGGATTGAAGACCTCGAGTCGACCAACG
GCACCTGGGTCAACCGCCACCGCATCCGCAAAAAGGTCGAGTTGCATCGC
GGCGACACCGTCGATATCGGCGAGAGTCGCTTTGAAGTGCGTTAG
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