mRNA_P-wetherbeei_contig14943.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14943.2.1
Unique NamemRNA_P-wetherbeei_contig14943.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14943.2.1 vs. uniprot
Match: A0A1H8XSQ9_9PROT (VOC domain-containing protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8XSQ9_9PROT)

HSP 1 Score: 226 bits (577), Expect = 9.190e-75
Identity = 100/125 (80.00%), Postives = 118/125 (94.40%), Query Frame = 1
Query:    1 MTRPRIEHVNVTVSDPERAARLMEALFGWRVRWQGPARNGGHTIHVGSDDHYVALYTGHDVVYTADDFAKGRPLNHIGVEVDDLDATEAKVVAAGLRPFSHDDYEPGRRFYFLDPDGIEYEVVSY 375
            M+ PRIEHVNVTVS+PERAARLME LF W+VRW+GPAR+GG TIH+GS +HY+ALYTG DV YTADDFAKG+PLNHIG+EVDD+DATEA+VVAAGL+PF+HD+Y+PGRRFYFLDPDGIEYE++SY
Sbjct:    1 MSTPRIEHVNVTVSNPERAARLMEELFDWQVRWKGPARDGGRTIHIGSKEHYIALYTGRDVAYTADDFAKGQPLNHIGIEVDDIDATEARVVAAGLKPFNHDNYDPGRRFYFLDPDGIEYEIISY 125          
BLAST of mRNA_P-wetherbeei_contig14943.2.1 vs. uniprot
Match: A0A1Q3KT93_9PROT (Glyoxalase n=1 Tax=Alphaproteobacteria bacterium 65-37 TaxID=1895711 RepID=A0A1Q3KT93_9PROT)

HSP 1 Score: 224 bits (571), Expect = 8.340e-74
Identity = 102/125 (81.60%), Postives = 113/125 (90.40%), Query Frame = 1
Query:    1 MTRPRIEHVNVTVSDPERAARLMEALFGWRVRWQGPARNGGHTIHVGSDDHYVALYTGHDVVYTADDFAKGRPLNHIGVEVDDLDATEAKVVAAGLRPFSHDDYEPGRRFYFLDPDGIEYEVVSY 375
            M  PRIEHVNVTV+DP+RAARLM+ALFGW+VRW+G AR+GGHTIHVGS +HY+ALYTGH V Y++DDF KGRPLNHIGVEVDDLD  EA+VVAAGLRPF H DY PGRRFYFLDPDGIEYEVVSY
Sbjct:    1 MAAPRIEHVNVTVTDPDRAARLMQALFGWQVRWRGAARDGGHTIHVGSAEHYIALYTGHGVAYSSDDFTKGRPLNHIGVEVDDLDTVEARVVAAGLRPFGHGDYAPGRRFYFLDPDGIEYEVVSY 125          
BLAST of mRNA_P-wetherbeei_contig14943.2.1 vs. uniprot
Match: A0A495RW06_SPHMI (Putative enzyme related to lactoylglutathione lyase n=1 Tax=Sphingosinicella microcystinivorans TaxID=335406 RepID=A0A495RW06_SPHMI)

HSP 1 Score: 218 bits (556), Expect = 1.460e-71
Identity = 99/125 (79.20%), Postives = 111/125 (88.80%), Query Frame = 1
Query:    1 MTRPRIEHVNVTVSDPERAARLMEALFGWRVRWQGPARNGGHTIHVGSDDHYVALYTGHDVVYTADDFAKGRPLNHIGVEVDDLDATEAKVVAAGLRPFSHDDYEPGRRFYFLDPDGIEYEVVSY 375
            M+ PRIEHVNVTV+DPER A LM+ LFGW++RWQGPAR+GG TIHVGSD HY+ALYTG +  YT +DFAKGRPLNHIGVEVDDLD TEA+V AAGL PF+HDDYEPGRRFYF DPDGIEYE+VSY
Sbjct:    1 MSFPRIEHVNVTVTDPERTAGLMQKLFGWKIRWQGPARDGGRTIHVGSDTHYIALYTGANAAYTEEDFAKGRPLNHIGVEVDDLDETEARVFAAGLVPFNHDDYEPGRRFYFFDPDGIEYEIVSY 125          
BLAST of mRNA_P-wetherbeei_contig14943.2.1 vs. uniprot
Match: UPI00101C543D (VOC family protein n=1 Tax=Sphingosinicella sp. CPCC 101087 TaxID=2497754 RepID=UPI00101C543D)

HSP 1 Score: 208 bits (530), Expect = 1.310e-67
Identity = 94/121 (77.69%), Postives = 106/121 (87.60%), Query Frame = 1
Query:   13 RIEHVNVTVSDPERAARLMEALFGWRVRWQGPARNGGHTIHVGSDDHYVALYTGHDVVYTADDFAKGRPLNHIGVEVDDLDATEAKVVAAGLRPFSHDDYEPGRRFYFLDPDGIEYEVVSY 375
            RIEHVNVTVSDPER A L++ LFGW++RWQGPAR+ G +IHVG+DDHYVALYTG    Y  DDFAKG+PLNHIG+EVDDLDA E +VVAAGL PF+H DYEPGRRFYFLDPDGIEYE+VSY
Sbjct:    4 RIEHVNVTVSDPERTANLLKQLFGWKIRWQGPARDNGRSIHVGTDDHYVALYTGDKEAYGPDDFAKGKPLNHIGIEVDDLDAAERRVVAAGLTPFNHGDYEPGRRFYFLDPDGIEYELVSY 124          
BLAST of mRNA_P-wetherbeei_contig14943.2.1 vs. uniprot
Match: A0A8G2CKG5_ACIRU (VOC domain-containing protein n=2 Tax=Acidiphilium TaxID=522 RepID=A0A8G2CKG5_ACIRU)

HSP 1 Score: 202 bits (514), Expect = 3.590e-65
Identity = 97/125 (77.60%), Postives = 105/125 (84.00%), Query Frame = 1
Query:    1 MTRPRIEHVNVTVSDPERAARLMEALFGWRVRWQGPARNGGHTIHVGSDDHYVALYTGHDVVYTADDFAKGRPLNHIGVEVDDLDATEAKVVAAGLRPFSHDDYEPGRRFYFLDPDGIEYEVVSY 375
            M+  RIEHVN+TV+DPER ARLM ALF WRVRW G ARNGGH+IHVG+ DHYVALY G     TA+ FAKGRPLNHIGVEVDDL  TEA+V+A GL PFSHDDYEPGRRFYF DPDGIEYEVVSY
Sbjct:    1 MSALRIEHVNITVADPERTARLMAALFDWRVRWSGAARNGGHSIHVGTSDHYVALYNGGQ---TAEVFAKGRPLNHIGVEVDDLADTEARVIAVGLTPFSHDDYEPGRRFYFFDPDGIEYEVVSY 122          
BLAST of mRNA_P-wetherbeei_contig14943.2.1 vs. uniprot
Match: A0A4P6FI98_9SPHN (VOC family protein n=1 Tax=Sphingosinicella sp. BN140058 TaxID=1892855 RepID=A0A4P6FI98_9SPHN)

HSP 1 Score: 202 bits (514), Expect = 3.710e-65
Identity = 94/125 (75.20%), Postives = 105/125 (84.00%), Query Frame = 1
Query:    1 MTRPRIEHVNVTVSDPERAARLMEALFGWRVRWQGPARNGGHTIHVGSDDHYVALYTGHDVVYTADDFAKGRPLNHIGVEVDDLDATEAKVVAAGLRPFSHDDYEPGRRFYFLDPDGIEYEVVSY 375
            MT PRIEHVNVTV+DPER A LM  LFGWR+RW GPAR+GG +IHVGS+DHYVALYTG    Y  +DFAKGRPLNHIG+ VDDLDA E +V AAGL+PF+H DY PGRRFYFLD DGIEYEVV+Y
Sbjct:    1 MTSPRIEHVNVTVTDPERVAALMSDLFGWRIRWSGPARDGGRSIHVGSEDHYVALYTGDREQYGPEDFAKGRPLNHIGIVVDDLDAVEGRVSAAGLQPFAHADYAPGRRFYFLDYDGIEYEVVAY 125          
BLAST of mRNA_P-wetherbeei_contig14943.2.1 vs. uniprot
Match: A0A1E4JSL4_9SPHN (Glyoxalase n=4 Tax=Sphingopyxis TaxID=165697 RepID=A0A1E4JSL4_9SPHN)

HSP 1 Score: 199 bits (507), Expect = 5.430e-64
Identity = 93/125 (74.40%), Postives = 106/125 (84.80%), Query Frame = 1
Query:    1 MTRPRIEHVNVTVSDPERAARLMEALFGWRVRWQGPARNGGHTIHVGSDDHYVALYTGHDVVYTADDFAKGRPLNHIGVEVDDLDATEAKVVAAGLRPFSHDDYEPGRRFYFLDPDGIEYEVVSY 375
            MTRP IEHVNVTVSDPER+A LM A+FGWR RW+GPAR+GG TIHVGSD  YVALYTG    + A  + KG PLNH+G++VDDLDA EA+V+AAGL PF+H DY+PGRRFYFLDPDGIEYEVVSY
Sbjct:    1 MTRPFIEHVNVTVSDPERSAALMAAIFGWRERWRGPARDGGTTIHVGSDSAYVALYTGPGGAHAAQRYPKGEPLNHVGIQVDDLDAIEAEVIAAGLVPFAHADYDPGRRFYFLDPDGIEYEVVSY 125          
BLAST of mRNA_P-wetherbeei_contig14943.2.1 vs. uniprot
Match: A0A2P7QYC0_9SPHN (Glyoxalase n=1 Tax=Sphingomonas deserti TaxID=2116704 RepID=A0A2P7QYC0_9SPHN)

HSP 1 Score: 196 bits (499), Expect = 7.170e-63
Identity = 93/125 (74.40%), Postives = 103/125 (82.40%), Query Frame = 1
Query:    1 MTRPRIEHVNVTVSDPERAARLMEALFGWRVRWQGPARNGGHTIHVGSDDHYVALYTGHDVVYTADDFAKGRPLNHIGVEVDDLDATEAKVVAAGLRPFSHDDYEPGRRFYFLDPDGIEYEVVSY 375
            M  PRIEHVNVTV+DPER A LM  LFGWR+RWQGPAR+GG  IHVGS DHYVALYTG    Y  DDFAKGRPLNHIG+ V+DLDA E +V+ AGL PF+H +YEPGRRFYFLD DGIEYEVV+Y
Sbjct:    1 MAFPRIEHVNVTVTDPERVAALMIDLFGWRIRWQGPARDGGRAIHVGSADHYVALYTGDRDHYGPDDFAKGRPLNHIGIVVEDLDAVEQRVLTAGLLPFAHAEYEPGRRFYFLDYDGIEYEVVAY 125          
BLAST of mRNA_P-wetherbeei_contig14943.2.1 vs. uniprot
Match: A0A1Y6ESF1_9SPHN (VOC domain-containing protein n=9 Tax=Sphingopyxis TaxID=165697 RepID=A0A1Y6ESF1_9SPHN)

HSP 1 Score: 196 bits (499), Expect = 8.430e-63
Identity = 91/125 (72.80%), Postives = 104/125 (83.20%), Query Frame = 1
Query:    1 MTRPRIEHVNVTVSDPERAARLMEALFGWRVRWQGPARNGGHTIHVGSDDHYVALYTGHDVVYTADDFAKGRPLNHIGVEVDDLDATEAKVVAAGLRPFSHDDYEPGRRFYFLDPDGIEYEVVSY 375
            MT P IEHVN+TVSDPER+A LM  +FGW  RW+GPAR+GG +IHVGSD+ YVALYTG D ++    FAKG PLNH+G++VDDLDA E KVV AGLRPF+H DYEPGRRFYF DPDGIEYEVVSY
Sbjct:    1 MTHPFIEHVNLTVSDPERSAALMARIFGWHERWRGPARDGGMSIHVGSDEAYVALYTGPDGLHANAHFAKGEPLNHVGIQVDDLDAIEGKVVDAGLRPFNHGDYEPGRRFYFFDPDGIEYEVVSY 125          
BLAST of mRNA_P-wetherbeei_contig14943.2.1 vs. uniprot
Match: A0A246JZF7_9SPHN (Glyoxalase n=1 Tax=Sphingopyxis witflariensis TaxID=173675 RepID=A0A246JZF7_9SPHN)

HSP 1 Score: 193 bits (490), Expect = 1.980e-61
Identity = 90/125 (72.00%), Postives = 101/125 (80.80%), Query Frame = 1
Query:    1 MTRPRIEHVNVTVSDPERAARLMEALFGWRVRWQGPARNGGHTIHVGSDDHYVALYTGHDVVYTADDFAKGRPLNHIGVEVDDLDATEAKVVAAGLRPFSHDDYEPGRRFYFLDPDGIEYEVVSY 375
            MT P IEHVN+TVSDP R A LM A+FGW  RW GPAR+GGHTIHVGSD  Y+ALYTG D  +    + KG PLNH+GV+VDDLDATEA+V AAGL PF+H DY+PGRRFYF DPDGIEYEVVSY
Sbjct:    1 MTHPFIEHVNLTVSDPARTASLMIAIFGWHERWNGPARDGGHTIHVGSDRAYIALYTGPDGEHADQRYPKGEPLNHVGVQVDDLDATEARVKAAGLIPFNHGDYQPGRRFYFFDPDGIEYEVVSY 125          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14943.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1H8XSQ9_9PROT9.190e-7580.00VOC domain-containing protein n=3 Tax=Alphaproteob... [more]
A0A1Q3KT93_9PROT8.340e-7481.60Glyoxalase n=1 Tax=Alphaproteobacteria bacterium 6... [more]
A0A495RW06_SPHMI1.460e-7179.20Putative enzyme related to lactoylglutathione lyas... [more]
UPI00101C543D1.310e-6777.69VOC family protein n=1 Tax=Sphingosinicella sp. CP... [more]
A0A8G2CKG5_ACIRU3.590e-6577.60VOC domain-containing protein n=2 Tax=Acidiphilium... [more]
A0A4P6FI98_9SPHN3.710e-6575.20VOC family protein n=1 Tax=Sphingosinicella sp. BN... [more]
A0A1E4JSL4_9SPHN5.430e-6474.40Glyoxalase n=4 Tax=Sphingopyxis TaxID=165697 RepID... [more]
A0A2P7QYC0_9SPHN7.170e-6374.40Glyoxalase n=1 Tax=Sphingomonas deserti TaxID=2116... [more]
A0A1Y6ESF1_9SPHN8.430e-6372.80VOC domain-containing protein n=9 Tax=Sphingopyxis... [more]
A0A246JZF7_9SPHN1.980e-6172.00Glyoxalase n=1 Tax=Sphingopyxis witflariensis TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14943contigP-wetherbeei_contig14943:524..898 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1174684.EBMC1_04399
PFAMsGlyoxalase,Glyoxalase_4
Model size375
Max annot lvl204457|Sphingomonadales
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.96e-63
EggNOG OGsCOG0346@1|root,COG0346@2|Bacteria,1N0XB@1224|Proteobacteria,2UD3M@28211|Alphaproteobacteria,2K5IX@204457|Sphingomonadales
DescriptionGlyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Cds size375
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186038.2756183-CDS-P-wetherbeei_contig14943:523..8981683186038.2756183-CDS-P-wetherbeei_contig14943:523..898Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14943 524..898 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14943.2.1prot_P-wetherbeei_contig14943.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14943 524..898 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14943.2.1

>prot_P-wetherbeei_contig14943.2.1 ID=prot_P-wetherbeei_contig14943.2.1|Name=mRNA_P-wetherbeei_contig14943.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=125bp
MTRPRIEHVNVTVSDPERAARLMEALFGWRVRWQGPARNGGHTIHVGSDD
HYVALYTGHDVVYTADDFAKGRPLNHIGVEVDDLDATEAKVVAAGLRPFS
HDDYEPGRRFYFLDPDGIEYEVVSY
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mRNA from alignment at P-wetherbeei_contig14943:524..898-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14943.2.1 ID=mRNA_P-wetherbeei_contig14943.2.1|Name=mRNA_P-wetherbeei_contig14943.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=375bp|location=Sequence derived from alignment at P-wetherbeei_contig14943:524..898- (Phaeothamnion wetherbeei SAG_119_79)
ATGACCAGGCCGCGGATAGAACATGTGAACGTCACCGTCAGCGATCCGGA GCGTGCCGCCCGGCTGATGGAGGCGCTGTTCGGTTGGCGGGTACGCTGGC AGGGACCGGCACGCAACGGCGGTCATACGATCCATGTCGGATCGGACGAT CACTACGTCGCCCTCTACACCGGGCACGACGTCGTTTACACAGCCGACGA CTTTGCCAAGGGACGCCCGCTCAACCACATCGGCGTGGAAGTCGATGATC TTGATGCGACCGAGGCCAAGGTCGTAGCGGCGGGCCTCAGACCTTTCTCA CACGATGACTACGAACCGGGTCGGCGGTTCTACTTCCTCGACCCGGATGG AATTGAATACGAAGTGGTGAGCTAT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14943:524..898-

>mRNA_P-wetherbeei_contig14943.2.1 ID=mRNA_P-wetherbeei_contig14943.2.1|Name=mRNA_P-wetherbeei_contig14943.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=375bp|location=Sequence derived from alignment at P-wetherbeei_contig14943:524..898- (Phaeothamnion wetherbeei SAG_119_79)
ATGACCAGGCCGCGGATAGAACATGTGAACGTCACCGTCAGCGATCCGGA
GCGTGCCGCCCGGCTGATGGAGGCGCTGTTCGGTTGGCGGGTACGCTGGC
AGGGACCGGCACGCAACGGCGGTCATACGATCCATGTCGGATCGGACGAT
CACTACGTCGCCCTCTACACCGGGCACGACGTCGTTTACACAGCCGACGA
CTTTGCCAAGGGACGCCCGCTCAACCACATCGGCGTGGAAGTCGATGATC
TTGATGCGACCGAGGCCAAGGTCGTAGCGGCGGGCCTCAGACCTTTCTCA
CACGATGACTACGAACCGGGTCGGCGGTTCTACTTCCTCGACCCGGATGG
AATTGAATACGAAGTGGTGAGCTAT
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