mRNA_P-wetherbeei_contig14943.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14943.1.1
Unique NamemRNA_P-wetherbeei_contig14943.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14943.1.1 vs. uniprot
Match: A0A6A7LY40_9PROT (VOC family protein n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6A7LY40_9PROT)

HSP 1 Score: 271 bits (692), Expect = 5.000e-92
Identity = 121/134 (90.30%), Postives = 126/134 (94.03%), Query Frame = 1
Query:    1 MRPVFTHCALHVQDLARSVAFYRDFCRLTVVDEHGEGPNDHAVWMSEEGRTDYVFVLLLGGPPHNQPREDLSHFGFALASRSEVDVMAERGRASGCLAWEPKDFPYPVGYRCALKDPDGYVVEFSYGQPLGPGA 402
            M+PVFTHCALHVQDL  SVAFYRDFC+LTVVDEHGEGPNDHAVWM+EEGRTDYVFVLLLGGPPHNQ REDLSHFGFAL SR+EVD MAERGR  GCLAWEPK FPYPVGYRCALKDPDGYV+EFSYGQPLGPGA
Sbjct:    1 MKPVFTHCALHVQDLELSVAFYRDFCKLTVVDEHGEGPNDHAVWMTEEGRTDYVFVLLLGGPPHNQSREDLSHFGFALGSRAEVDAMAERGRNEGCLAWEPKAFPYPVGYRCALKDPDGYVIEFSYGQPLGPGA 134          
BLAST of mRNA_P-wetherbeei_contig14943.1.1 vs. uniprot
Match: UPI0019FE8A10 (VOC family protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019FE8A10)

HSP 1 Score: 174 bits (442), Expect = 7.740e-54
Identity = 82/135 (60.74%), Postives = 96/135 (71.11%), Query Frame = 1
Query:    1 MRPVFTHCALHVQDLARSVAFYRDFCRLTVVDEHGEGPNDHAVWMSEEGRT-DYVFVLLLGGPPHNQPREDLSHFGFALASRSEVDVMAERGRASGCLAWEPKDFPYPVGYRCALKDPDGYVVEFSYGQPLGPGA 402
            M   FTH ALHV+DLA  VAFYRDFC L VV E GE  +  AVW++  GR  +++FVLL GGP  +Q   D SHFGFAL SR  VD +A +  A+GCL W P++ PYPVGY C L+DPDG  VEFSYGQPLGPGA
Sbjct:    1 MTTAFTHVALHVRDLAACVAFYRDFCGLKVVHERGEPGDPRAVWLAHPGREREFIFVLLPGGPGRDQGDRDFSHFGFALDSREAVDAVAGKAAAAGCLLWAPREEPYPVGYYCGLRDPDGNAVEFSYGQPLGPGA 135          
BLAST of mRNA_P-wetherbeei_contig14943.1.1 vs. uniprot
Match: UPI001996DBEB (VOC family protein n=1 Tax=Methyloceanibacter sp. TaxID=1965321 RepID=UPI001996DBEB)

HSP 1 Score: 173 bits (438), Expect = 2.680e-53
Identity = 75/133 (56.39%), Postives = 96/133 (72.18%), Query Frame = 1
Query:    1 MRPVFTHCALHVQDLARSVAFYRDFCRLTVVDEHGEGPNDHAVWMSEEGRTD-YVFVLLLGGPPHNQPREDLSHFGFALASRSEVDVMAERGRASGCLAWEPKDFPYPVGYRCALKDPDGYVVEFSYGQPLGP 396
            M+P FTHCALHV+DL +S+AFYR +C L  V EHGEG      W++  G  D +V VLL GG P  Q ++D++H+GF + +R +VD +AERGR  GCL WEP+D   P GY CA+KDP GY++EFSYGQPLGP
Sbjct:    1 MKPAFTHCALHVRDLDQSIAFYRSYCGLETVKEHGEGEG-RVAWLASPGEEDNFVLVLLGGGAPREQDKDDMTHYGFGVXAREDVDRIAERGRREGCLHWEPRDSAPPTGYLCAVKDPSGYIIEFSYGQPLGP 132          
BLAST of mRNA_P-wetherbeei_contig14943.1.1 vs. uniprot
Match: A0A3D3S2C4_9GAMM (VOC family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D3S2C4_9GAMM)

HSP 1 Score: 168 bits (426), Expect = 2.320e-51
Identity = 79/135 (58.52%), Postives = 92/135 (68.15%), Query Frame = 1
Query:    1 MRPVFTHCALHVQDLARSVAFYRDFCRLTVVDEHGEGPNDHAVWMSEEGRT-DYVFVLLLGGPPHNQPREDLSHFGFALASRSEVDVMAERGRASGCLAWEPKDFPYPVGYRCALKDPDGYVVEFSYGQPLGPGA 402
            M P FTH ALHV+DL   + FYRD+C + +V E  E      VW++E G+  D + VLL GGP  +QP  D SHFGFAL SR  VD +A R  A+GCLAW P+  PYPVGY C LKDPDG  VEFSYGQPLGPGA
Sbjct:    1 MVPAFTHLALHVRDLEACIGFYRDYCGMNLVHER-EDAGTRVVWLAEPGKEKDLIIVLLPGGPGRDQPEGDFSHFGFALESREAVDAIAARAEAAGCLAWAPRQEPYPVGYYCGLKDPDGNFVEFSYGQPLGPGA 134          
BLAST of mRNA_P-wetherbeei_contig14943.1.1 vs. uniprot
Match: UPI001872912D (VOC family protein n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI001872912D)

HSP 1 Score: 168 bits (425), Expect = 3.090e-51
Identity = 78/133 (58.65%), Postives = 93/133 (69.92%), Query Frame = 1
Query:    7 PVFTHCALHVQDLARSVAFYRDFCRLTVVDEHGEGPNDHAVWMSEEGRT-DYVFVLLLGGPPHNQPREDLSHFGFALASRSEVDVMAERGRASGCLAWEPKDFPYPVGYRCALKDPDGYVVEFSYGQPLGPGA 402
            P FTH ALHV+DLA  +AFYRD+C + VV E  +G     VW++E GR  D++ V+L GGP  +Q   D SH GFAL S+  VD +A R  A+GCLAW P+  PYPVGY C LKDPDG  VEFSYGQPLGPGA
Sbjct:    8 PAFTHLALHVRDLAACLAFYRDYCGMNVVHERNDG-GVRVVWLAEPGREKDFIIVMLPGGPGRDQAEGDFSHLGFALESKEAVDAIAARAEAAGCLAWAPRQEPYPVGYYCGLKDPDGNFVEFSYGQPLGPGA 139          
BLAST of mRNA_P-wetherbeei_contig14943.1.1 vs. uniprot
Match: A0A3D9HFH0_9PROT (Catechol 2,3-dioxygenase-like lactoylglutathione lyase family enzyme n=1 Tax=Aestuariispira insulae TaxID=1461337 RepID=A0A3D9HFH0_9PROT)

HSP 1 Score: 167 bits (424), Expect = 4.670e-51
Identity = 75/135 (55.56%), Postives = 94/135 (69.63%), Query Frame = 1
Query:    1 MRPVFTHCALHVQDLARSVAFYRDFCRLTVVDEHGEGPNDHAVWMSEEG-RTDYVFVLLLGGPPHNQPREDLSHFGFALASRSEVDVMAERGRASGCLAWEPKDFPYPVGYRCALKDPDGYVVEFSYGQPLGPGA 402
            M+P  TH ALHV+DL   VAFYRD+C L +V E         VW++E+  R D++FVLL GGP  +Q +ED SH GFA  S+  VDV+A + RA+GCL WEP+  PYP GY C ++DPDG  VEFS+GQPLGPGA
Sbjct:    1 MKPTLTHIALHVRDLEACVAFYRDYCGLVIVHERSHEDVKQVVWLAEDPERHDFIFVLLKGGPGRDQEKEDYSHLGFACPSKQAVDVIAAKARAAGCLIWEPRAEPYPTGYYCGIRDPDGNAVEFSFGQPLGPGA 135          
BLAST of mRNA_P-wetherbeei_contig14943.1.1 vs. uniprot
Match: A0A545TSC7_9GAMM (VOC family protein n=1 Tax=Exilibacterium tricleocarpae TaxID=2591008 RepID=A0A545TSC7_9GAMM)

HSP 1 Score: 167 bits (424), Expect = 5.130e-51
Identity = 79/135 (58.52%), Postives = 93/135 (68.89%), Query Frame = 1
Query:    1 MRPVFTHCALHVQDLARSVAFYRDFCRLTVVDEHGEGPNDHAVWMSEEGR-TDYVFVLLLGGPPHNQPREDLSHFGFALASRSEVDVMAERGRASGCLAWEPKDFPYPVGYRCALKDPDGYVVEFSYGQPLGPGA 402
            M P  TH ALHV+DL   VAFYRD+C ++VV E   G      W++E GR TD+VFV++ GG     P +D  HFGFAL SR+ VD +AER R  GCL WEP+D PYPVGY C L+DP G  VEFSYGQPLGPGA
Sbjct:    1 MYPRITHIALHVEDLDACVAFYRDYCAMSVVHERSSG-RKRIAWLAESGRETDFVFVMMSGGRTLELPAQDYRHFGFALESRAAVDAVAERARQDGCLIWEPRDEPYPVGYYCGLRDPGGNQVEFSYGQPLGPGA 134          
BLAST of mRNA_P-wetherbeei_contig14943.1.1 vs. uniprot
Match: A0A2S6UHF4_9PROT (VOC domain-containing protein n=1 Tax=Alphaproteobacteria bacterium MarineAlpha4_Bin1 TaxID=2013074 RepID=A0A2S6UHF4_9PROT)

HSP 1 Score: 166 bits (420), Expect = 1.840e-50
Identity = 75/130 (57.69%), Postives = 93/130 (71.54%), Query Frame = 1
Query:   16 THCALHVQDLARSVAFYRDFCRLTVVDEHGEGPNDHAVWMSEEGR-TDYVFVLLLGGPPHNQPREDLSHFGFALASRSEVDVMAERGRASGCLAWEPKDFPYPVGYRCALKDPDGYVVEFSYGQPLGPGA 402
            TH ALHV++L R V FYR++C L +V E  +G     VW++E GR ++++FVLL GGP       D SHFGFALASR  VD +AE+GR +GCL W P+  P+PVGY C LKDPDG  VEFS+GQPLGPGA
Sbjct:    6 THIALHVKELERCVEFYREYCGLKIVRERRDGAGKLIVWLAEPGRESEFIFVLLPGGPGRQPTERDFSHFGFALASRQAVDAIAEKGRQAGCLEWPPRQEPFPVGYYCGLKDPDGNFVEFSFGQPLGPGA 135          
BLAST of mRNA_P-wetherbeei_contig14943.1.1 vs. uniprot
Match: UPI00190D35A9 (VOC family protein n=1 Tax=Pseudomonas stutzeri TaxID=316 RepID=UPI00190D35A9)

HSP 1 Score: 165 bits (417), Expect = 4.930e-50
Identity = 78/135 (57.78%), Postives = 90/135 (66.67%), Query Frame = 1
Query:    1 MRPVFTHCALHVQDLARSVAFYRDFCRLTVVDEHGEGPNDHAVWMSEEGRT-DYVFVLLLGGPPHNQPREDLSHFGFALASRSEVDVMAERGRASGCLAWEPKDFPYPVGYRCALKDPDGYVVEFSYGQPLGPGA 402
            MRP  TH ALHV DL   +AFY  FC + V  E   G     VWM+E G+  +++FVL+ GG   +    D SHFGFALASR EVD +AER R  GCL WEP+D PYPVGY C L+DP G  VEFSYGQPLGPGA
Sbjct:    1 MRPTLTHLALHVPDLEACIAFYSGFCNMHVFHER-PGKGSRIVWMAEPGKEREFIFVLMPGGTARSLAANDYSHFGFALASREEVDALAERARKDGCLIWEPRDEPYPVGYYCGLRDPAGNYVEFSYGQPLGPGA 134          
BLAST of mRNA_P-wetherbeei_contig14943.1.1 vs. uniprot
Match: UPI001422A0B9 (VOC family protein n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI001422A0B9)

HSP 1 Score: 165 bits (417), Expect = 5.600e-50
Identity = 77/138 (55.80%), Postives = 93/138 (67.39%), Query Frame = 1
Query:    1 MRPVFTHCALHVQDLARSVAFYRDFCRLTVVDEHGEGPND---HAVWMSEEGRT-DYVFVLLLGGPPHNQPREDLSHFGFALASRSEVDVMAERGRASGCLAWEPKDFPYPVGYRCALKDPDGYVVEFSYGQPLGPGA 402
            M P  TH ALHV+DL   +AFY DFC +  V E  +G +D     VW++E GR  D++ VLL GGP  +Q   D SHFGFAL S++ VD +A R  + GCLAW P+  PYPVGY C L+DPDG  VEFSYGQPLGPGA
Sbjct:    1 MTPSLTHLALHVRDLDACIAFYSDFCGMKTVHERDDGSDDGGFRVVWLAEPGREKDFIIVLLPGGPGRDQAEGDFSHFGFALESKAAVDAVAARAESEGCLAWAPRQEPYPVGYYCGLRDPDGNFVEFSYGQPLGPGA 138          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14943.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A7LY40_9PROT5.000e-9290.30VOC family protein n=1 Tax=Rhodospirillales bacter... [more]
UPI0019FE8A107.740e-5460.74VOC family protein n=1 Tax=Proteobacteria bacteriu... [more]
UPI001996DBEB2.680e-5356.39VOC family protein n=1 Tax=Methyloceanibacter sp. ... [more]
A0A3D3S2C4_9GAMM2.320e-5158.52VOC family protein n=1 Tax=Gammaproteobacteria bac... [more]
UPI001872912D3.090e-5158.65VOC family protein n=1 Tax=Pelagibius sp. NBU2595 ... [more]
A0A3D9HFH0_9PROT4.670e-5155.56Catechol 2,3-dioxygenase-like lactoylglutathione l... [more]
A0A545TSC7_9GAMM5.130e-5158.52VOC family protein n=1 Tax=Exilibacterium tricleoc... [more]
A0A2S6UHF4_9PROT1.840e-5057.69VOC domain-containing protein n=1 Tax=Alphaproteob... [more]
UPI00190D35A94.930e-5057.78VOC family protein n=1 Tax=Pseudomonas stutzeri Ta... [more]
UPI001422A0B95.600e-5055.80VOC family protein n=1 Tax=Pelagibius litoralis Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14943contigP-wetherbeei_contig14943:110..511 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1218352.B597_017510
PFAMsGlyoxalase
Model size402
Max annot lvl1236|Gammaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.63e-50
EggNOG OGsCOG0346@1|root,COG0346@2|Bacteria,1RJR7@1224|Proteobacteria,1S71Y@1236|Gammaproteobacteria,1Z2SU@136846|Pseudomonas stutzeri group
DescriptionCOG0346 Lactoylglutathione lyase and related lyases
Cds size402
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186038.241572-CDS-P-wetherbeei_contig14943:109..5111683186038.241572-CDS-P-wetherbeei_contig14943:109..511Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14943 110..511 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14943.1.1prot_P-wetherbeei_contig14943.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14943 110..511 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14943.1.1

>prot_P-wetherbeei_contig14943.1.1 ID=prot_P-wetherbeei_contig14943.1.1|Name=mRNA_P-wetherbeei_contig14943.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=134bp
MRPVFTHCALHVQDLARSVAFYRDFCRLTVVDEHGEGPNDHAVWMSEEGR
TDYVFVLLLGGPPHNQPREDLSHFGFALASRSEVDVMAERGRASGCLAWE
PKDFPYPVGYRCALKDPDGYVVEFSYGQPLGPGA
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mRNA from alignment at P-wetherbeei_contig14943:110..511-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14943.1.1 ID=mRNA_P-wetherbeei_contig14943.1.1|Name=mRNA_P-wetherbeei_contig14943.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=402bp|location=Sequence derived from alignment at P-wetherbeei_contig14943:110..511- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGGCCGGTGTTCACGCACTGCGCTCTGCACGTGCAGGATCTCGCGCG CTCGGTCGCGTTCTATCGCGATTTCTGCCGACTCACCGTCGTCGACGAGC ATGGCGAGGGGCCGAACGATCACGCCGTCTGGATGAGCGAAGAGGGCCGT ACCGACTACGTCTTTGTGCTGCTGTTGGGCGGCCCGCCACACAACCAGCC GCGCGAGGACCTGAGCCATTTCGGCTTCGCGCTCGCCAGCCGCAGCGAAG TTGACGTCATGGCCGAGCGTGGCCGCGCATCAGGCTGTCTCGCATGGGAG CCGAAGGACTTTCCCTATCCCGTGGGATATCGCTGTGCACTCAAGGACCC CGACGGCTATGTCGTGGAGTTCAGCTACGGCCAGCCACTGGGACCTGGTG CC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14943:110..511-

>mRNA_P-wetherbeei_contig14943.1.1 ID=mRNA_P-wetherbeei_contig14943.1.1|Name=mRNA_P-wetherbeei_contig14943.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=402bp|location=Sequence derived from alignment at P-wetherbeei_contig14943:110..511- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGGCCGGTGTTCACGCACTGCGCTCTGCACGTGCAGGATCTCGCGCG
CTCGGTCGCGTTCTATCGCGATTTCTGCCGACTCACCGTCGTCGACGAGC
ATGGCGAGGGGCCGAACGATCACGCCGTCTGGATGAGCGAAGAGGGCCGT
ACCGACTACGTCTTTGTGCTGCTGTTGGGCGGCCCGCCACACAACCAGCC
GCGCGAGGACCTGAGCCATTTCGGCTTCGCGCTCGCCAGCCGCAGCGAAG
TTGACGTCATGGCCGAGCGTGGCCGCGCATCAGGCTGTCTCGCATGGGAG
CCGAAGGACTTTCCCTATCCCGTGGGATATCGCTGTGCACTCAAGGACCC
CGACGGCTATGTCGTGGAGTTCAGCTACGGCCAGCCACTGGGACCTGGTG
CC
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