mRNA_P-wetherbeei_contig1494.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1494.1.1 vs. uniprot
Match: D7FJK8_ECTSI (rRNA biogenesis protein RRP36 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJK8_ECTSI) HSP 1 Score: 196 bits (498), Expect = 3.240e-55 Identity = 107/175 (61.14%), Postives = 140/175 (80.00%), Query Frame = 3
Query: 984 PARLGKNRPQEMSSRRAVGRHRQVVESEQRRGRDPRFEALSG--RLNYDVFRKSYSFLEGYQDGEVDQLRKALRKEKNPERSAKIQAALTKLQQERATRLRADATTAALRSAKRAEAEKVAAGKAPFYLKKSEKRRVALEQRYAELEKEGRLAKFLEKKRKRNAAKDHRWLPGSR 1502
P+R KNRPQE SSRRAVGR R+VV ++++ RDPRFE G +LNYD+FRK+Y FL YQD E+++L+K+L+KEKN ERS ++QA LT+LQQERA R + D T A+R AK+ E E VA+GK PF+LK SEK+R++LEQRY L+++G+L+KF+EKKRK+NAAKDHRWLP R
Sbjct: 117 PSRANKNRPQEASSRRAVGRFREVVVTKRKTSRDPRFEGGGGSSKLNYDIFRKAYGFLGTYQDSEIEELKKSLKKEKNQERSGRLQALLTRLQQERAERSQGDRTRTAIREAKKKEREAVASGKKPFFLKGSEKKRLSLEQRYEGLKEDGKLSKFMEKKRKKNAAKDHRWLPSKR 291
BLAST of mRNA_P-wetherbeei_contig1494.1.1 vs. uniprot
Match: A0A835YP85_9STRA (rRNA biogenesis protein RRP36 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP85_9STRA) HSP 1 Score: 196 bits (498), Expect = 2.430e-54 Identity = 110/181 (60.77%), Postives = 138/181 (76.24%), Query Frame = 3
Query: 984 PARLGKNRPQEMSSRRAVGRHRQVVESEQRRGRDPRFEALSGRLNYDVFRKSYSFLEGYQDGEVDQLRKALRKEK------NPERSAKIQAALTKLQQERATRLRADATTAALRSAKRAEAEKVAAGKAPFYLKKSEKRRVALEQRYAELEKEGRLAKFLEKKRKRNAAKDHRWLPGSRRS 1508
P R KN+P EMSS+RAVGRHR+VVE +RR RDPRF+A +G LNYD+FRKSY FLEGYQDGE+D LRK K K + ER+A +A LTK+QQERA R RADAT AAL ++AEAE VA GKAP+++K ++R +ALE RY EL +EG++ KF++KKRKRNAAKD RW+P R++
Sbjct: 175 PKRANKNQPMEMSSKRAVGRHREVVEVRRRRARDPRFDAATGTLNYDMFRKSYEFLEGYQDGEIDALRKEAAKAKKRRGDGSAERAAAAKALLTKMQQERAERKRADATRAALSQRRKAEAEAVAKGKAPYFMKARDRRALALETRYEELRREGKVQKFVQKKRKRNAAKDRRWMPAKRQN 355
BLAST of mRNA_P-wetherbeei_contig1494.1.1 vs. uniprot
Match: T0S1H5_SAPDV (rRNA biogenesis protein RRP36 n=2 Tax=Saprolegnia TaxID=4769 RepID=T0S1H5_SAPDV) HSP 1 Score: 150 bits (380), Expect = 5.820e-39 Identity = 84/172 (48.84%), Postives = 123/172 (71.51%), Query Frame = 3
Query: 990 RLGKNRPQEMSSRRAVGRHRQVVESEQRRGRDPRFEALSGRLNYDVFRKSYSFLEGYQDGEVDQLRKALRKEKNPERSAKIQAALTKLQQERATRLRADATTAALRSAKRAEAEKVAAGKAPFYLKKSEKRRVALEQRYAELEKEGRLAKFLEKKRKRNAAKDHRWLPGSRR 1505
R KN P+EM+S+R V R R+V++ ++ RDPRF+A SG+LN D+F+K+Y+FLE Y+D E+D+++K L+K K+ R A ++ L +QERA RAD A + KR E E VA GK+ FYLK+ +K++V L+ +Y EL++ GRL+KF+ K+RK+NA KDHRWLP R+
Sbjct: 46 RANKNCPREMTSKRPVARFREVLQIRKKASRDPRFDAASGKLNEDLFKKAYTFLEDYKDAELDEVKKQLKKAKSATRKAALKEELASRKQERAETHRADKIREATQKRKREEREAVANGKSAFYLKRKDKKQVELKAKYDELQESGRLSKFMAKRRKKNANKDHRWLPTQRK 217
BLAST of mRNA_P-wetherbeei_contig1494.1.1 vs. uniprot
Match: A0A662WCQ7_9STRA (rRNA biogenesis protein RRP36 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WCQ7_9STRA) HSP 1 Score: 149 bits (375), Expect = 3.930e-38 Identity = 84/172 (48.84%), Postives = 123/172 (71.51%), Query Frame = 3
Query: 990 RLGKNRPQEMSSRRAVGRHRQVVESEQRRGRDPRFEALSGRLNYDVFRKSYSFLEGYQDGEVDQLRKALRKEKNPERSAKIQAALTKLQQERATRLRADATTAALRSAKRAEAEKVAAGKAPFYLKKSEKRRVALEQRYAELEKEGRLAKFLEKKRKRNAAKDHRWLPGSRR 1505
R KNRP E++S+RAVGR +QVVE ++RR DPRFEA SGRLN D+F KSYSFL+ Y+ E+ +L++ L+ K+ R +I+ ++ QER+ + + + AL KR E E VA+GK PFYLK+ +K+++ L+ ++ L++ GRL+KF+ KKRK+NA+KDHRWLP R+
Sbjct: 58 RANKNRPMELTSKRAVGRFKQVVEVKKRRVLDPRFEAQSGRLNEDLFAKSYSFLDEYKQRELGELKRQLKSAKSTTRKEEIKHEISLRSQERSEKQKTEKIRDALTKRKREEREAVASGKNPFYLKRKDKKKLELQAKFQNLQETGRLSKFMAKKRKKNASKDHRWLPTQRK 229
BLAST of mRNA_P-wetherbeei_contig1494.1.1 vs. uniprot
Match: A0A1V9YXH6_9STRA (rRNA biogenesis protein RRP36 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YXH6_9STRA) HSP 1 Score: 148 bits (373), Expect = 4.980e-38 Identity = 84/173 (48.55%), Postives = 122/173 (70.52%), Query Frame = 3
Query: 990 RLGKNRPQEMSSRRAVGRHRQVVESEQRRGRDPRFEALSGRLNYDVFRKSYSFLEGYQDGEVDQLRKALRKEKNPERSAKIQAALTKLQQERATRLRADATTAALRSAKRAEAEKVAAGKAPFYLKKSEKRRVALEQRYAELEKEGRLAKFLEKKRKRNAAKDHRWLPGSRRS 1508
R KN P+EM+S+R V R R+V++ ++ RDPRF+ SG+LN D+F+KSY+FLE Y+D E+D ++K LRK K+ R +++A L +QERA RAD A KR E E VA GK+ FYLK+ +K+++ L+ +Y EL++ GRL+KF+ K+RK+NA KDHRWLP R++
Sbjct: 42 RANKNCPREMTSKRPVARFREVLQIRKKGSRDPRFDNASGKLNEDLFKKSYAFLEDYKDAELDDVKKQLRKAKSKTRREELKADLATRKQERAESHRADRIREATLKRKREEREAVANGKSAFYLKRKDKKQIELKAKYDELQESGRLSKFMAKRRKKNANKDHRWLPTQRKT 214
BLAST of mRNA_P-wetherbeei_contig1494.1.1 vs. uniprot
Match: A0A3M6VW06_9STRA (rRNA biogenesis protein RRP36 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VW06_9STRA) HSP 1 Score: 147 bits (372), Expect = 7.330e-38 Identity = 84/172 (48.84%), Postives = 123/172 (71.51%), Query Frame = 3
Query: 990 RLGKNRPQEMSSRRAVGRHRQVVESEQRRGRDPRFEALSGRLNYDVFRKSYSFLEGYQDGEVDQLRKALRKEKNPERSAKIQAALTKLQQERATRLRADATTAALRSAKRAEAEKVAAGKAPFYLKKSEKRRVALEQRYAELEKEGRLAKFLEKKRKRNAAKDHRWLPGSRR 1505
R KN+P E+SS+RAVGR RQVVE +++R DPRFEA SGRLN D+F KSY+FL+ Y+ E+ QL++ L+K K+ + +++ + QQE + + D +AL KR E E VA+GK FYLK+ +K++V L+ ++ +L++ GRL+KF+ KKRK+NA+KDHRWLP R+
Sbjct: 45 RANKNQPLELSSKRAVGRFRQVVEVKKKRLLDPRFEAQSGRLNEDLFNKSYAFLDEYKQRELQQLKQQLKKTKSVAKKDELKHEIALRQQEMTEKQKRDKIQSALTKRKREEREAVASGKGAFYLKRKDKKKVELQAKFQDLQETGRLSKFMAKKRKKNASKDHRWLPTQRK 216
BLAST of mRNA_P-wetherbeei_contig1494.1.1 vs. uniprot
Match: G4YS32_PHYSP (rRNA biogenesis protein RRP36 n=4 Tax=Phytophthora TaxID=4783 RepID=G4YS32_PHYSP) HSP 1 Score: 147 bits (371), Expect = 9.920e-38 Identity = 82/172 (47.67%), Postives = 123/172 (71.51%), Query Frame = 3
Query: 990 RLGKNRPQEMSSRRAVGRHRQVVESEQRRGRDPRFEALSGRLNYDVFRKSYSFLEGYQDGEVDQLRKALRKEKNPERSAKIQAALTKLQQERATRLRADATTAALRSAKRAEAEKVAAGKAPFYLKKSEKRRVALEQRYAELEKEGRLAKFLEKKRKRNAAKDHRWLPGSRR 1505
R KN+P E+SS+RAVGR RQVVE ++RR DPRFEA SGRLN D+F KSY+FL+ Y+ E+ +L++ L+K K+ + +++ + QQE + + + +AL KR E E VA+GK FYLK+ +K+++ L+ ++ +L++ GRL+KF+ KKRK+NA+KDHRWLP R+
Sbjct: 44 RANKNQPLELSSKRAVGRFRQVVEVKKRRALDPRFEAQSGRLNEDLFNKSYAFLDDYKQRELQELKQQLKKTKSVTKKDELKHEIALRQQEMTEKQKTEKIKSALTKRKREEREAVASGKGAFYLKRKDKKKLELQAKFQDLQETGRLSKFMAKKRKKNASKDHRWLPTQRK 215
BLAST of mRNA_P-wetherbeei_contig1494.1.1 vs. uniprot
Match: A0A2P4X8B4_9STRA (rRNA biogenesis protein RRP36 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A2P4X8B4_9STRA) HSP 1 Score: 145 bits (367), Expect = 3.940e-37 Identity = 82/172 (47.67%), Postives = 123/172 (71.51%), Query Frame = 3
Query: 990 RLGKNRPQEMSSRRAVGRHRQVVESEQRRGRDPRFEALSGRLNYDVFRKSYSFLEGYQDGEVDQLRKALRKEKNPERSAKIQAALTKLQQERATRLRADATTAALRSAKRAEAEKVAAGKAPFYLKKSEKRRVALEQRYAELEKEGRLAKFLEKKRKRNAAKDHRWLPGSRR 1505
R KN+P E+SS+RAVGR RQVVE +++R DPRFEA SGRLN D+F KSY+FL+ Y+ E+ +L++ L+K KN + +++ + QQE + + + +AL KR E E VA+GK FYLK+ +K+++ L+ ++ +L++ GRL+KF+ KKRK+NA+KDHRWLP R+
Sbjct: 46 RANKNQPLELSSKRAVGRFRQVVEVKKKRVLDPRFEAQSGRLNEDLFNKSYAFLDEYKQRELQELKQQLKKTKNMTKKDELKHEIALRQQEMTEKNKQEKIKSALTKRKREEREAVASGKGAFYLKRKDKKKLELQAKFQDLQETGRLSKFMAKKRKKNASKDHRWLPTQRK 217
BLAST of mRNA_P-wetherbeei_contig1494.1.1 vs. uniprot
Match: A0A024GFI2_9STRA (rRNA biogenesis protein RRP36 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GFI2_9STRA) HSP 1 Score: 144 bits (362), Expect = 1.830e-36 Identity = 81/168 (48.21%), Postives = 114/168 (67.86%), Query Frame = 3
Query: 990 RLGKNRPQEMSSRRAVGRHRQVVESEQRRGRDPRFEALSGRLNYDVFRKSYSFLEGYQDGEVDQLRKALRKEKNPERSAKIQAALTKLQQERATRLRADATTAALRSAKRAEAEKVAAGKAPFYLKKSEKRRVALEQRYAELEKEGRLAKFLEKKRKRNAAKDHRWLP 1493
R KN+P EM+S++ VGR RQVV+ +R DPRF+ L G+LN D+F KSYSFL+ Y++ E+D LRK ++K KN ER +Q + L QE + ++ AL KR E E V GK+PFY+K+ +K++V L+ ++ ELE+ G LA F+ KKRK+N+ KDHRWLP
Sbjct: 42 RSNKNQPIEMTSKKPVGRFRQVVDVRNKRPHDPRFDPLCGKLNQDLFAKSYSFLDSYKENELDTLRKEVKKAKNKERKGDLQQKVNVLAQEIKEKKKSSRLQNALTERKRQEREAVINGKSPFYMKRKDKKKVELQIKFQELEESGNLANFMAKKRKKNSNKDHRWLP 209
BLAST of mRNA_P-wetherbeei_contig1494.1.1 vs. uniprot
Match: A0A7S2Y0G1_9STRA (rRNA biogenesis protein RRP36 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0G1_9STRA) HSP 1 Score: 142 bits (359), Expect = 6.150e-36 Identity = 91/187 (48.66%), Postives = 125/187 (66.84%), Query Frame = 3
Query: 990 RLGKNRPQEMSSRRAVGRHRQVV---------ESEQRRGRDPRFEALSGRLNYDVFRKSYSFLEGYQDGEVD----QLRKALRKEKN-PERSAKIQAALTKLQQERATRLRADATTAALRSAKRAEAEKVAAGKAP-FYLKKSEKRRVALEQRYAELEKEGRLAKFLEKKRKRNAAKDHRWLPGSRR 1505
R KNRP E SS+ VGR+R V +++ + RDPRFE +SG++NYD+FRK+Y FLE YQD E+ +L+KA +K K+ ER +++Q AL KL+QER+ R+R D L + K+ E V GK FYLK K+ + LEQRY EL+++G+L KF+EKKRK+NA+KDHRWLP +RR
Sbjct: 34 RENKNRPVERSSKVPVGRYRDVAVRPGDGSQSTAQKYQPRDPRFEGVSGKMNYDLFRKTYQFLEQYQDSEIQALEAELKKAQKKSKSGAERVSEVQLALQKLRQERSQRVRGDRVRGVLGAHKKLERRAVQQGKKKAFYLKGKAKKEIVLEQRYQELKEKGQLKKFMEKKRKKNASKDHRWLPAARR 220 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1494.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1494.1.1 >prot_P-wetherbeei_contig1494.1.1 ID=prot_P-wetherbeei_contig1494.1.1|Name=mRNA_P-wetherbeei_contig1494.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=511bp MGKRTRTKRSREANGGPTPAPPASAQASRPGTNGVKRAPRPHAAISQPPVback to top mRNA from alignment at P-wetherbeei_contig1494:642..2698+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1494.1.1 ID=mRNA_P-wetherbeei_contig1494.1.1|Name=mRNA_P-wetherbeei_contig1494.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2057bp|location=Sequence derived from alignment at P-wetherbeei_contig1494:642..2698+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1494:642..2698+ >mRNA_P-wetherbeei_contig1494.1.1 ID=mRNA_P-wetherbeei_contig1494.1.1|Name=mRNA_P-wetherbeei_contig1494.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1533bp|location=Sequence derived from alignment at P-wetherbeei_contig1494:642..2698+ (Phaeothamnion wetherbeei SAG_119_79)back to top |