mRNA_P-wetherbeei_contig1493.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1493.2.2
Unique NamemRNA_P-wetherbeei_contig1493.2.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1493.2.2 vs. uniprot
Match: A0A6H5K7B9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7B9_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 1.950e-62
Identity = 107/209 (51.20%), Postives = 147/209 (70.33%), Query Frame = 2
Query:  128 IDSREWQARLEAFDVPRSYLNKLVMSYIIVQGYQDAAAHFQRESGTEPSVDLRTIEERVAIRRAVLEGDIPRAVDLVNRMDPEMLQQDRTLLFQLKRQHLLELIRARKTDDALDFARDELASLGEADPTFLEQLEQTMTLLAFKDARTSPLAHLLDVEQRQATAGRLNASILAAQYEQKEPRLPDLLRLLEHAQRDLDGRTAYPVVTGL 754
            IDS  W  R++  +V +  LN+LVM+Y++V+GY+DAA HF  ESGT+  VDL TIEERVAIR+A+++G++  A+ L N +DP ML +DR L F L +Q LLEL+R    D+AL FA + LA  G  DP  L Q+E+ +TLLAF+DA +SPL+ LLD+EQR A AGRLNA++L +Q ++  P LPDLLR L + Q  L  R  +P + G+
Sbjct:   26 IDSPSWDVRMKRCEVAKGELNELVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKAMMQGNVVEAMKLANDLDPTMLDRDRELRFGLLKQRLLELVRRGDADEALSFAAEHLAPEGAQDPAILRQIEEAVTLLAFEDATSSPLSGLLDMEQRHAAAGRLNAAVLQSQQQETGPWLPDLLRQLVYTQNALSERVEFPRIEGI 234          
BLAST of mRNA_P-wetherbeei_contig1493.2.2 vs. uniprot
Match: A0A250XH70_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XH70_9CHLO)

HSP 1 Score: 206 bits (525), Expect = 4.450e-62
Identity = 105/215 (48.84%), Postives = 152/215 (70.70%), Query Frame = 2
Query:  116 LERRIDSREWQARLEAFDVPRSYLNKLVMSYIIVQGYQDAAAHFQRESGTEPSVDLRTIEERVAIRRAVLEGDIPRAVDLVNRMDPEMLQQDRTLLFQLKRQHLLELIRARKTDDALDFARDELASLGEADPTFLEQLEQTMTLLAFKDARTSPLAHLLDVEQRQATAGRLNASILAAQYEQKEPRLPDLLRLLEHAQRDLDGRTAYPVVTGLAV 760
            +  +I+  +W+A+L A ++P+  +NKL+M+++I +GY +AA  F++ESGT  S+DL TI+ER+ IRRAV  G +  A+D VN M+PE+L+    L F +++Q L+ELIR  KT++AL FA + LA  GE  P FLE+LE+T+TLLAF DA++SPL  L+D+ QRQ TA  LNA+IL +Q   KE RLP LL++L  +Q  LD + AYP +T L  
Sbjct:    1 MSSKINMEQWEAKLSAVNIPKEEMNKLIMNFLITEGYVEAAKMFEKESGTAASMDLSTIQERMEIRRAVQSGQMDVAIDKVNDMNPEILETQEELFFHMQQQRLIELIRKGKTEEALQFAEEYLAPQGEEHPRFLEELERTVTLLAFHDAKSSPLGDLMDIAQRQKTASELNAAILHSQCLDKESRLPTLLKILFWSQAQLDDKCAYPHITDLVT 215          
BLAST of mRNA_P-wetherbeei_contig1493.2.2 vs. uniprot
Match: A0A0D2WNY8_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WNY8_CAPO3)

HSP 1 Score: 207 bits (526), Expect = 7.310e-62
Identity = 111/219 (50.68%), Postives = 155/219 (70.78%), Query Frame = 2
Query:  122 RRIDSREWQARLEAFDVPRSYLNKLVMSYIIVQGYQDAAAHFQRESGTEPSVDLRTIEERVAIRRAVLEGDIPRAVDLVNRMDPEMLQQDRTLLFQLKRQHLLELIRARKTDDALDFARDELASLGEADPTFLEQLEQTMTLLAFKDARTSPLAHLLDVEQRQATAGRLNASILAAQYEQKEPRLPDLLRLLEHAQRDLDGRTAYP----VVTGLAVED 766
            + I   EWQ  L++  V +S LN+LVM+Y++++GY+DAA  F  E G  P+VDL +IE+R+ IR AV  G I  A++LVN ++P++L  +  L FQL+ Q L+ELIRA + D+AL FA+ ELA  GE  P FLE+LE+ + LLAF + RTSP+ HLLD+ QRQ TA  LNA+ILA+Q ++++P+LP LL++L  AQ  LD RT YP    VVTG A++D
Sbjct:    9 KTITRAEWQTMLDSVSVSKSSLNRLVMNYLVIEGYKDAAERFASECGETPTVDLSSIEDRMCIRTAVQRGAIEEAIELVNDLNPDILDTNPKLCFQLQLQRLIELIRAGQIDEALAFAQSELAPRGEEQPQFLEELEKALALLAFDNQRTSPVGHLLDLAQRQKTASALNAAILASQNQERDPKLPSLLKMLAWAQTQLDDRTKYPRINDVVTG-ALQD 226          
BLAST of mRNA_P-wetherbeei_contig1493.2.2 vs. uniprot
Match: A0A2P6VAA0_9CHLO (Glucose-induced degradation 8-like protein n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VAA0_9CHLO)

HSP 1 Score: 205 bits (522), Expect = 1.470e-61
Identity = 104/214 (48.60%), Postives = 152/214 (71.03%), Query Frame = 2
Query:  113 NLERRIDSREWQARLEAFDVPRSYLNKLVMSYIIVQGYQDAAAHFQRESGTEPSVDLRTIEERVAIRRAVLEGDIPRAVDLVNRMDPEMLQQDRTLLFQLKRQHLLELIRARKTDDALDFARDELASLGEADPTFLEQLEQTMTLLAFKDARTSPLAHLLDVEQRQATAGRLNASILAAQYEQKEPRLPDLLRLLEHAQRDLDGRTAYPVVTGL 754
            N +RRI   EW+ +L+   + +  +N++VM++++ +GY DAA  F+RESGT P VDL  I +R  IRRAV  GD+ +A++ VN +DP++L++ + L F L++Q L+ELIR  +  +AL+FA++ LA  GE +P  LE+LE+T+ LL FKD + SPLA L+DV QRQ TA  LNA+ILAAQ ++ EP+LP+LL+LL  AQR LD +  YP +  L
Sbjct:    7 NSKRRISRDEWERKLKDVKIRKEDMNRVVMNFLVTEGYVDAARVFERESGTAPGVDLEQITDRTEIRRAVQSGDVEQAIERVNDLDPDILERQQRLFFHLQQQRLIELIRGGQLAEALEFAQEYLAPRGEDNPELLEELERTVALLVFKDVKASPLADLMDVAQRQKTASELNAAILAAQSQEAEPKLPNLLKLLVWAQRQLDEKATYPHIQDL 220          
BLAST of mRNA_P-wetherbeei_contig1493.2.2 vs. uniprot
Match: I0YTC2_COCSC (Uncharacterized protein n=2 Tax=Coccomyxa TaxID=41891 RepID=I0YTC2_COCSC)

HSP 1 Score: 203 bits (516), Expect = 1.210e-60
Identity = 99/206 (48.06%), Postives = 153/206 (74.27%), Query Frame = 2
Query:  122 RRIDSREWQARLEAFDVPRSYLNKLVMSYIIVQGYQDAAAHFQRESGTEPSVDLRTIEERVAIRRAVLEGDIPRAVDLVNRMDPEMLQQDRTLLFQLKRQHLLELIRARKTDDALDFARDELASLGEADPTFLEQLEQTMTLLAFKDARTSPLAHLLDVEQRQATAGRLNASILAAQYEQKEPRLPDLLRLLEHAQRDLDGRTAYP 739
            ++I  +EW +++ A  + +  +N+LVM++++ +GY +AA  F++ESGT P VDL  I +R+ IR+AV  G++  A++ VN ++PE+L++ + L F L++Q L+ELIR  KT+DAL+FA++ LA  GE +P FLE+LE+TM LLAF+D R+SP+A L+D+ QRQ TA  LNA+IL++Q +++EPRLP LL+LL  AQ  LD +  YP
Sbjct:    7 KKILIKEWDSKIAAVKIRKEDMNRLVMNFLVTEGYVEAAHTFEKESGTPPGVDLGAITDRMEIRKAVQSGNVEEAIERVNDLNPEILEEKQQLSFHLQQQRLIELIRQGKTEDALEFAQEYLAPRGEENPAFLEELERTMALLAFEDTRSSPVADLMDISQRQKTASELNAAILSSQCQEREPRLPGLLKLLLWAQNQLDSKAIYP 212          
BLAST of mRNA_P-wetherbeei_contig1493.2.2 vs. uniprot
Match: A0A5J4Y143_9CHLO (Glucose-induced degradation 8 protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y143_9CHLO)

HSP 1 Score: 200 bits (508), Expect = 2.110e-59
Identity = 106/213 (49.77%), Postives = 149/213 (69.95%), Query Frame = 2
Query:  122 RRIDSREWQARLEAFDVPRSYLNKLVMSYIIVQGYQDAAAHFQRESGTEPSVDLRTIEERVAIRRAVLEGDIPRAVDLVNRMDPEMLQQDRTLLFQLKRQHLLELIRARKTDDALDFARDELASLGEADPTFLEQLEQTMTLLAFKDARTSPLAHLLDVEQRQATAGRLNASILAAQYEQKEPRLPDLLRLLEHAQRDLDGRTAYPVVTGLAV 760
            + +   +W+ +L A  + +  +NKLVM+++   GY DAA  F +ES T P VDL  I +R+ IR+AV  GDI +A++ VN ++PE+L+Q   L F +++Q L+ELIR  +T++AL+ A+D LA  GE DP FLE+LE+T+TLLAF+DA  SPLA L+DV QRQ TA  LNA+IL++Q ++KEPRLP LL+LL  AQ  LD R  YP +  LA 
Sbjct:   18 KTVSKDDWEKKLAAVKIHKEDMNKLVMNFL---GYVDAAEVFHKESNTMPGVDLAAITDRMEIRKAVQSGDIQQAIERVNDLNPEILEQQHELSFHMQQQRLIELIRQGRTEEALEHAQDYLAPPGEDDPAFLEELERTVTLLAFEDASQSPLADLMDVSQRQKTASELNAAILSSQCQEKEPRLPTLLKLLVWAQNQLDTRCTYPRINDLAA 227          
BLAST of mRNA_P-wetherbeei_contig1493.2.2 vs. uniprot
Match: F0Z9M6_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0Z9M6_DICPU)

HSP 1 Score: 199 bits (506), Expect = 2.550e-59
Identity = 98/204 (48.04%), Postives = 148/204 (72.55%), Query Frame = 2
Query:  128 IDSREWQARLEAFDVPRSYLNKLVMSYIIVQGYQDAAAHFQRESGTEPSVDLRTIEERVAIRRAVLEGDIPRAVDLVNRMDPEMLQQDRTLLFQLKRQHLLELIRARKTDDALDFARDELASLGEADPTFLEQLEQTMTLLAFKDARTSPLAHLLDVEQRQATAGRLNASILAAQYEQKEPRLPDLLRLLEHAQRDLDGRTAYP 739
            I  +EW+ +L   ++ +  LNKLVM++++++GYQ+AAA FQ ESGT   VDL +I +R+AIR A+  GD+ + +++VN ++PE+L  +  L F L++Q L+ELIR  +  +AL FA++ELAS GE +  FLE+LE+T++LLAF+D   SP+A LLD  QRQ TAG LNA+IL +Q + K+P+LP +++LL+ AQ  LD +  YP
Sbjct:    6 ISKKEWEEKLSEVNISKQDLNKLVMNFLVIEGYQEAAAKFQEESGTSSIVDLNSIADRMAIRSAIQSGDVEKGIEIVNDLNPEILDTNPQLYFHLQQQKLIELIRKGQISEALKFAQEELASQGEENEKFLEELEKTISLLAFEDTSKSPIASLLDHSQRQKTAGELNAAILTSQSQDKDPKLPTIIKLLKWAQTQLDSKCQYP 209          
BLAST of mRNA_P-wetherbeei_contig1493.2.2 vs. uniprot
Match: A0A507CS87_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CS87_9FUNG)

HSP 1 Score: 198 bits (504), Expect = 8.140e-59
Identity = 102/218 (46.79%), Postives = 151/218 (69.27%), Query Frame = 2
Query:  128 IDSREWQARLEAFDVPRSYLNKLVMSYIIVQGYQDAAAHFQRESGTEPSVDLRTIEERVAIRRAVLEGDIPRAVDLVNRMDPEMLQQDRTLLFQLKRQHLLELIRARKTDDALDFARDELASLGEADPTFLEQLEQTMTLLAFKDARTSPLAHLLDVEQRQATAGRLNASILAAQYEQKEPRLPDLLRLLEHAQRDLDGRTAYPVVTGLAVEDDD*PI 781
            I   EW+ +L+   + ++ LN+LVM+Y++++GY+DAA  F  ESG  PS+DL  IEER+ IR A+  G+I  A++ VN +DP++L  +  L F L++Q L+ELIR  +  DA+DFA+DELA  GE +P FL++LE+TM LLAF D + SP+  LLD  QRQ TA  LN++ILAAQ + K+P+LP +L++L  AQ  LD + +YP V  L+  + + P+
Sbjct:   10 IPRDEWEKKLDEVKINKNDLNRLVMNYLVIEGYKDAAEKFAAESGLPPSIDLAHIEERMNIRNAIQSGNIEEAIERVNDLDPDILDTNPKLFFHLQQQRLIELIRHGRIMDAIDFAQDELAPRGEENPEFLDELERTMALLAFDDHQKSPVGALLDYSQRQKTASELNSAILAAQCQDKDPKLPTMLKMLVWAQNQLDEKYSYPKVKNLSTAELEDPL 227          
BLAST of mRNA_P-wetherbeei_contig1493.2.2 vs. uniprot
Match: A9NQZ9_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NQZ9_PICSI)

HSP 1 Score: 199 bits (506), Expect = 9.040e-59
Identity = 100/212 (47.17%), Postives = 149/212 (70.28%), Query Frame = 2
Query:  122 RRIDSREWQARLEAFDVPRSYLNKLVMSYIIVQGYQDAAAHFQRESGTEPSVDLRTIEERVAIRRAVLEGDIPRAVDLVNRMDPEMLQQDRTLLFQLKRQHLLELIRARKTDDALDFARDELASLGEADPTFLEQLEQTMTLLAFKDARTSPLAHLLDVEQRQATAGRLNASILAAQYEQKEPRLPDLLRLLEHAQRDLDGRTAYPVVTGLA 757
            R I   EW+ +L    + +  +NKLVM++++ +GY +AA  F  ESGTEP +DL TI +R+A+RRAV  G++  A++ VN ++PE+L  +  L F L++Q L+ELIR  K ++ALDFA++ELA  GE + TFLE+LE+T+ LLAF+DA + PL  LLD+ QR  TA  +NA+IL +Q  +K+P+LP LL++L  AQR LD +  YP ++ +A
Sbjct:   41 RVITKEEWEKKLNDVKIRKEDMNKLVMNFLVTEGYVEAAERFHIESGTEPEIDLATITDRMAVRRAVQSGNVQDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRNGKVEEALDFAQEELAPRGEENHTFLEELERTVALLAFEDASSCPLGELLDISQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQRQLDEKACYPHISDIA 252          
BLAST of mRNA_P-wetherbeei_contig1493.2.2 vs. uniprot
Match: A0A1Y1Y6B0_9FUNG (Uncharacterized protein n=2 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y6B0_9FUNG)

HSP 1 Score: 197 bits (502), Expect = 1.230e-58
Identity = 102/204 (50.00%), Postives = 140/204 (68.63%), Query Frame = 2
Query:  128 IDSREWQARLEAFDVPRSYLNKLVMSYIIVQGYQDAAAHFQRESGTEPSVDLRTIEERVAIRRAVLEGDIPRAVDLVNRMDPEMLQQDRTLLFQLKRQHLLELIRARKTDDALDFARDELASLGEADPTFLEQLEQTMTLLAFKDARTSPLAHLLDVEQRQATAGRLNASILAAQYEQKEPRLPDLLRLLEHAQRDLDGRTAYP 739
            I   EW  RL+   V +  LNKLVM+Y++++GY+DAA  F +E G  P++DL +IE+R+ IR AV  GDI  AV+ VN +DPE+L  +  L F L++Q L+ELIR    D+AL+FA++ELA  GE +P  L++LEQTM LLAF+D   SP+  LLD   RQ TA  LNA+IL +Q + K+P+LP LL++L  AQ  LD +T YP
Sbjct:   10 ISKEEWSERLDKVQVNKHDLNKLVMNYLVIEGYKDAAEKFSQECGLSPNIDLTSIEDRMNIRNAVHSGDIGEAVERVNDLDPEILDTNPKLFFHLQQQRLIELIRKGNVDEALEFAQEELAPRGEENPEMLQELEQTMALLAFEDLNKSPVGELLDHTHRQKTASELNAAILTSQSQDKDPKLPGLLKMLVWAQNQLDEKTNYP 213          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1493.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K7B9_9PHAE1.950e-6251.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A250XH70_9CHLO4.450e-6248.84Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A0D2WNY8_CAPO37.310e-6250.68Uncharacterized protein n=1 Tax=Capsaspora owczarz... [more]
A0A2P6VAA0_9CHLO1.470e-6148.60Glucose-induced degradation 8-like protein n=1 Tax... [more]
I0YTC2_COCSC1.210e-6048.06Uncharacterized protein n=2 Tax=Coccomyxa TaxID=41... [more]
A0A5J4Y143_9CHLO2.110e-5949.77Glucose-induced degradation 8 protein n=1 Tax=Treb... [more]
F0Z9M6_DICPU2.550e-5948.04Uncharacterized protein n=1 Tax=Dictyostelium purp... [more]
A0A507CS87_9FUNG8.140e-5946.79Uncharacterized protein n=1 Tax=Synchytrium endobi... [more]
A9NQZ9_PICSI9.040e-5947.17Uncharacterized protein n=1 Tax=Picea sitchensis T... [more]
A0A1Y1Y6B0_9FUNG1.230e-5850.00Uncharacterized protein n=2 Tax=Basidiobolus meris... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1493contigP-wetherbeei_contig1493:5150..7100 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G2A7
Preferred nameGID8
PFAMsCLTH,LisH
Model size1022
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006109,GO:0006111,GO:0006508,GO:0006511,GO:0006807,GO:0007089,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010498,GO:0010564,GO:0010675,GO:0010677,GO:0010906,GO:0019222,GO:0019538,GO:0019941,GO:0030054,GO:0030163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032991,GO:0034657,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043255,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045721,GO:0045787,GO:0045912,GO:0045931,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051603,GO:0051726,GO:0062012,GO:0062014,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0090068,GO:1900087,GO:1901564,GO:1901565,GO:1901575,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902806,GO:1902808,GO:2000045
Exons4
Evalue9.73e-65
EggNOG OGsKOG2659@1|root,KOG2659@2759|Eukaryota
Ec32 ortholog descriptionLisH dimerisation motif, subgroup
Ec32 orthologEc-16_001850.1
Descriptionnegative regulation of gluconeogenesis
Cds size756
COG categoryL
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1493.2.2prot_P-wetherbeei_contig1493.2.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1493 5169..6853 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186037.8783264-UTR-P-wetherbeei_contig1493:5149..51681683186037.8783264-UTR-P-wetherbeei_contig1493:5149..5168Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1493 5150..5168 +
1683186037.9248877-UTR-P-wetherbeei_contig1493:6853..71001683186037.9248877-UTR-P-wetherbeei_contig1493:6853..7100Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1493 6854..7100 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186037.8879156-CDS-P-wetherbeei_contig1493:5168..54341683186037.8879156-CDS-P-wetherbeei_contig1493:5168..5434Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1493 5169..5434 +
1683186037.895515-CDS-P-wetherbeei_contig1493:5698..58061683186037.895515-CDS-P-wetherbeei_contig1493:5698..5806Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1493 5699..5806 +
1683186037.9030378-CDS-P-wetherbeei_contig1493:6115..62811683186037.9030378-CDS-P-wetherbeei_contig1493:6115..6281Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1493 6116..6281 +
1683186037.9138193-CDS-P-wetherbeei_contig1493:6637..68531683186037.9138193-CDS-P-wetherbeei_contig1493:6637..6853Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1493 6638..6853 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1493.2.2

>prot_P-wetherbeei_contig1493.2.2 ID=prot_P-wetherbeei_contig1493.2.2|Name=mRNA_P-wetherbeei_contig1493.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=252bp
MDDSDDAHGGESGRGEDGEEGDESSLSEEGENLERRIDSREWQARLEAFD
VPRSYLNKLVMSYIIVQGYQDAAAHFQRESGTEPSVDLRTIEERVAIRRA
VLEGDIPRAVDLVNRMDPEMLQQDRTLLFQLKRQHLLELIRARKTDDALD
FARDELASLGEADPTFLEQLEQTMTLLAFKDARTSPLAHLLDVEQRQATA
GRLNASILAAQYEQKEPRLPDLLRLLEHAQRDLDGRTAYPVVTGLAVEDD
D*
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mRNA from alignment at P-wetherbeei_contig1493:5150..7100+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1493.2.2 ID=mRNA_P-wetherbeei_contig1493.2.2|Name=mRNA_P-wetherbeei_contig1493.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1951bp|location=Sequence derived from alignment at P-wetherbeei_contig1493:5150..7100+ (Phaeothamnion wetherbeei SAG_119_79)
CTTTTCCTTGTCACATCGGATGGACGACTCTGACGACGCCCACGGTGGCG AATCCGGGCGAGGCGAAGACGGGGAGGAGGGCGACGAGAGCAGCCTGAGC GAGGAGGGAGAGAACCTGGAGCGACGAATCGACTCCCGGGAATGGCAGGC GCGGCTCGAGGCGTTCGACGTGCCGCGCAGCTACTTGAACAAACTCGTCA TGAGCTACATCATTGTGCAGGGCTATCAAGACGCGGCGGCCCACTTTCAG CGGGAGTCGGGCACCGAGCCGAGCGTCGATTTAAGGTACGCATGGAAAAT GCTGCCGCAAGGTTAGCTGTTTTTCTCTTGGTGGCGGTGTTTCGATCATT TGAGAAATCATCCGAATTTGACTTTGCTCATCTCTTTTGGTGTTCTTCAC TCGCAGGAAAATCACAAACAATCAGTGTAATTTCTCTTTAAATCGGCAGC AGAGCCCATGGGAAAGTTGTTTTTAGCTCCCCTACCTCTGCCGTTCTTGT TTCTGTTGCCATTGGGATGCCGCGGTGCCGCTGCGCCCCGGCCACGCAGG ACGATTGAGGAGCGCGTGGCGATTCGGCGGGCCGTGCTGGAGGGCGACAT TCCGCGGGCGGTGGACCTTGTAAACCGGATGGACCCCGAGATGCTGCAGC AGGACAGGTGCGTTTTCGATGTGCACTTGGGCTATAATCGGCGTCTGTGT TCCGCTGTTTCTGCAATCGCTGATCGTTAGCTGTATGCTCGTGACGGTCT TCATTTCTGATGATTTTTGGTTCGCCTTGATTTTGCCATTCGTCTTTTCC CCGCTGTCTGCTGCTGTATCCTGCTTGCACCATATGCAATGTTTGAAAGA CAGGAGACGCCTCATGACCGTCGAAAGATAACCTCCATCCGCGCTCCCTT CTTCGCCGTCTCCTTTGGAACGGCTAACCTCCTGTCTGCCGATGCGGCTG TCTGGAGAAAGCGCAGGACGCTGCTGTTCCAGCTGAAGCGGCAGCACCTG CTGGAGCTGATCCGGGCGAGGAAGACGGACGACGCGTTGGACTTTGCGCG GGACGAGCTGGCGTCTCTCGGTGAGGCCGACCCGACCTTCCTCGAGCAGC TCGAGCAGACCATGACCCTCCTCGCCTTCAAGGTCGGTGCTGTTGGGGTA TGCTTGCTCCAGGGCTCTCTTCTTTGCGTGAGTTGATATTTTGCCCAAGT TTTGTTACCAGTATCATTGCCGTGACATTGAACCCCCCCTCCCCCCGCCG GCTGGCTAATCTGCTGCCACGCCAGTTAGTGCAGCAGCATTCTTGCGATG CCTCCCCGACTGCATCAAGCTGGCTTCTTTTCTTGACGTGCGTCCGCTCC TTTTCTTTTCTCCCTTCCTTTCGCTTTGAAATCCGCTGTGCGTGCCTGCC TTTCCTTCCTTCGAACCGATGGTTCTCCACCTCACTTCTCCGTGCCCTGA CAAACCGAACCGAACTGGACCGGAAACGATCTCTGCAGGACGCTCGGACG TCCCCACTGGCGCACCTACTGGACGTGGAGCAGCGGCAGGCGACGGCTGG GCGGCTCAACGCGTCAATCCTCGCGGCGCAGTACGAACAGAAGGAGCCGC GCCTCCCGGACCTGCTGCGGCTCCTGGAGCACGCCCAGCGGGACCTCGAT GGACGCACCGCCTACCCCGTCGTCACGGGCCTCGCCGTTGAGGACGATGA CTGACCGATTCATCCGTCTGAACGATCCTTTCTGGAGAATTTGCCTGATT GGACTGGCCAGCTGCATAGCTGAAGAGCAGACTGGCTGGCTGCCGGGATG GTGGCGGCTACCGGCTGCCTTAGCGGCAGCGATGATTGTGATGGTGGTGA TGATGGCGGCGGCGACGACGGCAGCGGCGGGTGAAGGCAGCGATGTCGGC AGGCTGCGGCATTGGCAACAGTTGCGGTAAAAATTCCGCCACTGTTTTGG C
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1493:5150..7100+

>mRNA_P-wetherbeei_contig1493.2.2 ID=mRNA_P-wetherbeei_contig1493.2.2|Name=mRNA_P-wetherbeei_contig1493.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=756bp|location=Sequence derived from alignment at P-wetherbeei_contig1493:5150..7100+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGACGACTCTGACGACGCCCACGGTGGCGAATCCGGGCGAGGCGAAGA
CGGGGAGGAGGGCGACGAGAGCAGCCTGAGCGAGGAGGGAGAGAACCTGG
AGCGACGAATCGACTCCCGGGAATGGCAGGCGCGGCTCGAGGCGTTCGAC
GTGCCGCGCAGCTACTTGAACAAACTCGTCATGAGCTACATCATTGTGCA
GGGCTATCAAGACGCGGCGGCCCACTTTCAGCGGGAGTCGGGCACCGAGC
CGAGCGTCGATTTAAGGACGATTGAGGAGCGCGTGGCGATTCGGCGGGCC
GTGCTGGAGGGCGACATTCCGCGGGCGGTGGACCTTGTAAACCGGATGGA
CCCCGAGATGCTGCAGCAGGACAGGACGCTGCTGTTCCAGCTGAAGCGGC
AGCACCTGCTGGAGCTGATCCGGGCGAGGAAGACGGACGACGCGTTGGAC
TTTGCGCGGGACGAGCTGGCGTCTCTCGGTGAGGCCGACCCGACCTTCCT
CGAGCAGCTCGAGCAGACCATGACCCTCCTCGCCTTCAAGGACGCTCGGA
CGTCCCCACTGGCGCACCTACTGGACGTGGAGCAGCGGCAGGCGACGGCT
GGGCGGCTCAACGCGTCAATCCTCGCGGCGCAGTACGAACAGAAGGAGCC
GCGCCTCCCGGACCTGCTGCGGCTCCTGGAGCACGCCCAGCGGGACCTCG
ATGGACGCACCGCCTACCCCGTCGTCACGGGCCTCGCCGTTGAGGACGAT
GACTGA
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