mRNA_P-wetherbeei_contig1490.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1490.2.1 vs. uniprot
Match: D8LC29_ECTSI (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC29_ECTSI) HSP 1 Score: 150 bits (379), Expect = 1.160e-37 Identity = 95/256 (37.11%), Postives = 139/256 (54.30%), Query Frame = 3
Query: 108 RIACDSCKKSAVLYCPQCVYAL---PGSDLP-RVHLPLEVHVLLE-EERKRSTGLQVAVLAPDSARVLEWP----EDIPIGEYGAET-VVLYPSDSSVTWGALRPEELAAVRRILLLDCRWQRGRAIANSPKLAGVRHIRIEQPPEHSRFWRWHSSGPGCLSSLEACYCILKEYQLATG----GGMATSAPSMPMSGSPKPPLEALLYLFVAQWQAIRSANAA----ANRPDPTGEEQKLRYLRQRVCPNRAVAVK 821
R C C K LYCP C+ + G + P + LPL+V V++ EER+RS+G+ VAV+AP S RV+ + +D+ Y E+ V++PS +SV W L E+LA VRR++L+D RW A+ PKL G+RH+RI +PP S+FWRWH+ G G + + EA Y +LK+++ ATG GG LE +L+LF I++A + + P+ EE K R + V +R V K
Sbjct: 28 RQECHRCGKRVRLYCPDCLILVGTPDGVETPTELRLPLQVDVVVTAEERRRSSGVHVAVMAPQSVRVVSFEGSGGDDLSSCSYRPESDFVVFPSAASVCWSELSEEDLARVRRVILIDSRWVNTGAVVGHPKLKGLRHVRIREPPAVSQFWRWHTEGEGHICTAEATYLVLKDFEEATGLVTRGGR----------------LEDILFLFALMGSRIKAAYESDPSKLGKSCPSSEEAKQRRRVRLVQLDRLVKAK 267
BLAST of mRNA_P-wetherbeei_contig1490.2.1 vs. uniprot
Match: A0A484EFL7_BRELC (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EFL7_BRELC) HSP 1 Score: 143 bits (361), Expect = 3.680e-35 Identity = 77/212 (36.32%), Postives = 117/212 (55.19%), Query Frame = 3
Query: 105 PRIACDSCKKSAVLYCPQCVYAL---PGSDLPRVHLPLEVHVLLEEERKRSTGLQVAVLAPDSARVLEWPED-----IPIGEYGAETVVLYPSDSSVTWGALRPEELAAVRRILLLDCRWQRGRAIANSPKLAGVRHIRIEQPPEHSRFWRWHSSGPGCLSSLEACYCILKEYQLATGGGMATSAPSMPMSGSPKPPLEALLYLFVAQWQAI 716
PR+ C SC++S YCP+C L +P++ LPL+VHV +++ K+ST VLAP R++ +P + +PI ++++YPS S EEL VR ++ +DC WQ+ I N P LA +RH+R+ QPP+ S FWR+H +G GC+S++EA +L+EY +A +A GS L LL+ F Q+ I
Sbjct: 11 PRVPCSSCQRSYKFYCPKCFIPLGVPKNVSVPKLKLPLQVHVWFQDKIKKSTAPHAKVLAPQDVRIVPYPRNENDDAMPIYTQD-RSILVYPSYKSEVLDQFSMEELRNVRTLIFIDCPWQKAPVIMNHPSLANLRHVRLSQPPKESNFWRYHKAGAGCVSTIEAIKLMLEEYT-----AVAKTANIETAVGSENTQLSDLLFFFKLQFLRI 216
BLAST of mRNA_P-wetherbeei_contig1490.2.1 vs. uniprot
Match: A0A1V9YI10_9STRA (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YI10_9STRA) HSP 1 Score: 137 bits (346), Expect = 3.840e-33 Identity = 86/260 (33.08%), Postives = 135/260 (51.92%), Query Frame = 3
Query: 108 RIACDSCKKSAVLYCPQC---VYALPGSDLPRVHLPLEVHVLLEEERKRSTGLQVAVLAPDSARVLEWP--EDIPIGEYGAETVVLYPSDSSVTWGALRPEELAAVRRILLLDCRWQRGRAIANSPKLAGVRHIRIEQPPEHSRFWRWHSSGPGCLSSLEACYCILKEYQLATGGGMATSAPSMPMSGSPKPPLEALLYLFVAQWQAIRSANAA--------ANRPDPTGEEQKLRYL-----RQRVCPNRAVAVKRRAD 833
R C +CKKS YC C + A G +PR+ LP++V +L ++ K+ST Q V+APD ++++P E A+ VV+YPS+ ++ L E++ + ++ +DC WQ+G I N P +A +R +++ +PP HS+FWR+HSSG GC+S++EA Y +L+EY A T + + P+ G LLY F I + A + E Q+LR+ R+R NR K+ AD
Sbjct: 16 RAVCPNCKKSNKFYCATCFVPIGAPNGVAVPRIRLPVKVDILFHDKIKKSTAPQGKVVAPDDIEIIQFPYAEGKAPAYDAAKAVVVYPSNDALVLDDL--EDIDQIETLIFIDCPWQKGPTILNHPSVAHLRAVKLAKPPLHSKFWRYHSSGEGCISTIEAVYLMLEEYLTALQKRNLTPSMTDPVGG--------LLYFFNIVHDVILETHKTDPNRQLERAPMSEAAKELQRLRHSQKEAGRKRKLENREAHKKKLAD 265
BLAST of mRNA_P-wetherbeei_contig1490.2.1 vs. uniprot
Match: A0A5D6YLJ5_9STRA (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YLJ5_9STRA) HSP 1 Score: 134 bits (338), Expect = 4.840e-32 Identity = 77/228 (33.77%), Postives = 120/228 (52.63%), Query Frame = 3
Query: 108 RIACDSCKKSAVLYCPQCVYAL---PGSDLPRVHLPLEVHVLLEEERKRSTGLQVAVLAPDSARVLEWPEDIPIGEYGAETVVLYPSDSSVTWGALRPEELAAVRRILLLDCRWQRGRAIANSPKLAGVRHIRIEQPPEHSRFWRWHSSGPGCLSSLEACYCILKEYQLATGGGMATSAPSMPM-SGSPKPPLEALLYLFVAQWQAIRSA-NAAANRPDPTGEEQKLR 776
R C SC +S YCP C A+ P + +P + LPL+VH+ +++RK+ST LA +L P A+TVV+YPS + T L ++L + R++ +DC WQ+ I LAG+R +++ +PP S+FWR+H++G GC+S++EA + +L+EY A A +PM GS + L LL+ F + I + P EE+K R
Sbjct: 9 RAPCGSCARSYKFYCPVCCVAVGPPPDAVIPNLALPLQVHIWFQDKRKKSTAPHAKALASRDVEILPLPLAHLPAYTRADTVVVYPSAEAETLAELTRDDLRGIERLVFIDCPWQKAPVILQDAALAGLRCVKLAKPPLESKFWRYHTAGKGCVSTIEAIHLMLEEYVAAA------RAAEVPMREGSEETQLSDLLFFFDLLYSQISDTYDREVKSKPPMDEEEKER 230
BLAST of mRNA_P-wetherbeei_contig1490.2.1 vs. uniprot
Match: A0A2D4BNR6_PYTIN (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BNR6_PYTIN) HSP 1 Score: 135 bits (339), Expect = 6.260e-32 Identity = 81/251 (32.27%), Postives = 136/251 (54.18%), Query Frame = 3
Query: 108 RIACDSCKKSAVLYCPQCVYAL---PGSDLPRVHLPLEVHVLLEEERKRSTGLQVAVLAPDSARVLEWP---EDIPIGEYGAETV-VLYPSDSSVTWGALRPEELAAVRRILLLDCRWQRGRAIANSPKLAGVRHIRIEQPPEHSRFWRWHSSGPGCLSSLEACYCILKEYQLATGGGMATSAPSMPM-SGSPKPPLEALLYLFVAQWQAIRSA---NAAANRPDPTGEEQKLRYLRQRVCPNRAVAVKRR 827
R C +C+ S YCP+C + G+ +P + LPL+V + +++ K+ST VLAP A+++ +P D +Y + V V+YP++ S T + E+LA V ++ +DC WQ+ I PKL G+R +++ PP HS+FWR+H +G GC+S++EA +L++Y A +A ++P+ +G+ L LL+ F + I + NR P E +K R QR+ ++ A K+R
Sbjct: 32 RAQCPTCEHSYKFYCPKCXVPVGVPXGTTVPALTLPLKVDIWFQDKIKKSTAPHAKVLAPQDAQIVPYPLSESDNAALDYDRDRVLVVYPTNQSETMPEMTAEDLAKVTTLVFIDCPWQKAPVILQDPKLQGLRCVKLATPPAHSKFWRYHQAGXGCVSTIEAVQLMLEDYT------KAMNAAALPLRAGAESTDLSDLLFFFKLLYSHIAETYEKDPRXNRKPPMDEHEKER---QRMLRHQKEAGKKR 273
BLAST of mRNA_P-wetherbeei_contig1490.2.1 vs. uniprot
Match: A0A1W0A5Q3_9STRA (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A5Q3_9STRA) HSP 1 Score: 129 bits (324), Expect = 3.620e-30 Identity = 68/201 (33.83%), Postives = 118/201 (58.71%), Query Frame = 3
Query: 108 RIACDSCKKSAVLYCPQCVYAL---PGSDLPRVHLPLEVHVLLEEERKRSTGLQVAVLAPDSARVLEWP--EDIPIGEYGAETVVLYPSDSSVTWGALRPEELAAVRRILLLDCRWQRGRAIANSPKLAGVRHIRIEQPPEHSRFWRWHSSGPGCLSSLEACYCILKEYQLATGGGMATSAPSMPMSGSPKPPLEALLYLF 695
R C CKKS+ YC C ++ + +P + LPL+V +L +++ K+ST Q V+AP ++ +P + + ++ VV+YPS+ ++ L ++LA++ ++ +DC WQ+G AI N ++ +R +++ +PP HS+FWR+HSSG GC+S++EA Y +L+EY A A +P+S + + LLY F
Sbjct: 6 RAPCPECKKSSKFYCATCCVSVGVPENTTVPCIRLPLKVDILFQDKLKKSTAPQGKVIAPQDIAIVPFPYVDGHTLAYDPSKCVVVYPSNDALVLEEL--DDLASIDTLIFIDCPWQKGPAILNDSSISHLRSVKLAKPPLHSKFWRYHSSGEGCISTIEAVYLMLEEYSAAC------HARDIPLSSTDN--VADLLYFF 196
BLAST of mRNA_P-wetherbeei_contig1490.2.1 vs. uniprot
Match: A0A067D5L9_SAPPC (tRNA-uridine aminocarboxypropyltransferase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D5L9_SAPPC) HSP 1 Score: 127 bits (320), Expect = 1.490e-29 Identity = 67/172 (38.95%), Postives = 107/172 (62.21%), Query Frame = 3
Query: 108 RIACDSCKKSAVLYCPQCVYALPG-SDL--PRVHLPLEVHVLLEEERKRSTGLQVAVLAPDSARVLEWP-EDIPIGEYG-AETVVLYPSDSSVTWGALRPEELAAVRRILLLDCRWQRGRAIANSPKLAGVRHIRIEQPPEHSRFWRWHSSGPGCLSSLEACYCILKEYQLA 608
R C +CKKS+ YC C +L SD+ PR+ LP+ + V+ ++ K+ST Q V+AP+ ++ +P +D Y A+ VV+YPS+ + L E+L + ++ +DC WQ+G AI N L+ +R +++ +PP HS+FWR+HSSG GC+S++EA Y +L+EY A
Sbjct: 9 REVCPTCKKSSKFYCATCFLSLGAPSDVHVPRIKLPVTIDVIFHDKIKKSTAPQGKVVAPEDIHIIPFPYKDGASPVYDPAKAVVVYPSNDAFVLDEL--EDLDQLETLIFIDCPWQKGPAILNDKSLSHLRTVKLAKPPLHSKFWRYHSSGDGCVSTIEAVYLMLEEYTAA 178
BLAST of mRNA_P-wetherbeei_contig1490.2.1 vs. uniprot
Match: A0A485K6R0_9STRA (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K6R0_9STRA) HSP 1 Score: 124 bits (310), Expect = 1.920e-28 Identity = 60/172 (34.88%), Postives = 105/172 (61.05%), Query Frame = 3
Query: 108 RIACDSCKKSAVLYCPQCVYAL--PGS-DLPRVHLPLEVHVLLEEERKRSTGLQVAVLAPDSARVLEWP--EDIPIGEYGAETVVLYPSDSSVTWGALRPEELAAVRRILLLDCRWQRGRAIANSPKLAGVRHIRIEQPPEHSRFWRWHSSGPGCLSSLEACYCILKEYQLA 608
R+ C CKKS YC +C L P + ++P + LPL++ ++ +++ K+ST V+AP+ +++ +P E P + VV+YPS+ + L E+L ++ ++ +DC WQ+ +I N P L+ +R +++ PP S+FWR+HSSG GC+S++EA + +L EY +A
Sbjct: 20 RVECPGCKKSCKYYCAKCFLPLGAPANVNVPHIRLPLKIDIVFQDKLKKSTAPHGKVVAPEDIQIVPYPFPESTPPHYDVKKAVVVYPSNDAAVINEL--EDLESLETLIFIDCPWQKAPSILNDPVLSHLRCVKLANPPLESKFWRYHSSGKGCISTIEAVHLLLDEYVVA 189
BLAST of mRNA_P-wetherbeei_contig1490.2.1 vs. uniprot
Match: A0A6A4ZVJ4_9STRA (tRNA-uridine aminocarboxypropyltransferase n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZVJ4_9STRA) HSP 1 Score: 124 bits (310), Expect = 6.000e-28 Identity = 78/236 (33.05%), Postives = 126/236 (53.39%), Query Frame = 3
Query: 108 RIACDSCKKSAVLYCPQCVYAL--PGSDL-PRVHLPLEVHVLLEEERKRSTGLQVAVLAPDSARVLEWP--EDIPIGEYGAETVVLYPSDSSVTWGALRPEELAAVRRILLLDCRWQRGRAIANSPKLAGVRHIRIEQPPEHSRFWRWHSSGPGCLSSLEACYCILKEYQLATGGGMAT-SAPSMPMSGSPKPPLEALLYLFVAQWQAIRSA-----NAAANRPDPTGEEQKLRYL 782
R C CKKS+ YC C + P + L PRV LPL V +L +++ K+ST V+APD ++ +P P E VV+YPS ++V L E+L +V+ ++ +DC WQ+ +I + P ++ +R +++ +PP S++WR+HSSG GC+S++EA + +L EY A + T P+ + SP LL+ F I + N +R + EE++ R L
Sbjct: 26 REECPGCKKSSKYYCVNCYVPIGAPSTVLVPRVRLPLRVDILFQDKIKKSTAPHGKVVAPDDISIIPYPFPSQNPPQYDVKEAVVVYPSINAVVIDEL--EDLDSVKTLIFIDCPWQKAPSILHDPAVSHLRCVKLARPPLESKYWRYHSSGKGCISTIEAVHLMLAEYSTAKQRLITTLPPPATESTASPTETTAPLLFFFHLLHDHIMNTHVTDPNRQVHRAPMSEEEKERRRL 259
BLAST of mRNA_P-wetherbeei_contig1490.2.1 vs. uniprot
Match: A0A024UII8_9STRA (tRNA-uridine aminocarboxypropyltransferase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UII8_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.200e-27 Identity = 71/207 (34.30%), Postives = 114/207 (55.07%), Query Frame = 3
Query: 108 RIACDSCKKSAVLYCPQCVYALPGS---DLPRVHLPLEVHVLLEEERKRSTGLQVAVLAPDSARVLEWP---EDIPIGEYGA-ETVVLYPSDSSVTWGALRPEELAAVRRILLLDCRWQRGRAIANSPKLAGVRHIRIEQPPEHSRFWRWHSSGPGCLSSLEACYCILKEYQLATG----GGMATSAPSMPMSGSPKPPLEALLYLF 695
R C C KS YC C + D+PR+ LPL+V +L ++++K+ST V+APD ++ +P E P +Y A E VV+YPS + L E+L +++ ++ +D WQ+ + N P L+ +R +++ +PP S++WR+HSSG GC+S++EA + +L EY A M T AP+ P L+ LL+ F
Sbjct: 32 RELCPGCNKSCKYYCAVCYLPIGAPLTVDVPRIRLPLQVDILFQDKQKKSTAPHGKVVAPDDIAIIPYPFPEESRP--QYDAKEAVVVYPSIDAYVIDEL--EDLDSLKTLIFIDTPWQKAPTVLNDPALSHLRCVKLARPPLESKYWRYHSSGKGCISTIEAVHLLLVEYVAAKAQRAVASMTTVAPATPSC------LDPLLFFF 228 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1490.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1490.2.1 >prot_P-wetherbeei_contig1490.2.1 ID=prot_P-wetherbeei_contig1490.2.1|Name=mRNA_P-wetherbeei_contig1490.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=470bp MASSAVLPRSDRWKELDEFFKVPLSYPPRIACDSCKKSAVLYCPQCVYALback to top mRNA from alignment at P-wetherbeei_contig1490:1981..3800+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1490.2.1 ID=mRNA_P-wetherbeei_contig1490.2.1|Name=mRNA_P-wetherbeei_contig1490.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1820bp|location=Sequence derived from alignment at P-wetherbeei_contig1490:1981..3800+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1490:1981..3800+ >mRNA_P-wetherbeei_contig1490.2.1 ID=mRNA_P-wetherbeei_contig1490.2.1|Name=mRNA_P-wetherbeei_contig1490.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1410bp|location=Sequence derived from alignment at P-wetherbeei_contig1490:1981..3800+ (Phaeothamnion wetherbeei SAG_119_79)back to top |