mRNA_P-wetherbeei_contig14888.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14888.2.1 vs. uniprot
Match: D7G6Q8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Q8_ECTSI) HSP 1 Score: 110 bits (274), Expect = 1.020e-27 Identity = 52/92 (56.52%), Postives = 67/92 (72.83%), Query Frame = 1
Query: 7 AVKADSTLKVVDVDVERLYLRAEAKSAVPPTGIDDIEFLIKPDDGLVTYRTKSRDTVFVGPLAVSDGGSNRNSRLEGVRSRLGWPEAGLNQF 282
AV+ D LK+VD D + LY+ A AKSAVPP G D +EFL KP DGLV++R+KS V+ GP+ V DG SNRN RLE +R +LGWPE G++ +
Sbjct: 129 AVENDPQLKLVDQDADALYISAMAKSAVPPDGFDKVEFLFKPSDGLVSFRSKSLKNVYAGPVIVGDGNSNRN-RLEALRKKLGWPEEGIDNY 219
BLAST of mRNA_P-wetherbeei_contig14888.2.1 vs. uniprot
Match: A0A7S3XUK8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUK8_HETAK) HSP 1 Score: 103 bits (256), Expect = 3.740e-25 Identity = 47/90 (52.22%), Postives = 68/90 (75.56%), Query Frame = 1
Query: 1 VNAVKADSTLKVVDVDVERLYLRAEAKSAVPPTGIDDIEFLIKPDDGLVTYRTKSRDTVFVGPLAVSDGGSNRNSRLEGVRSRLGWPEAG 270
V +K D LK+ ++D E+ YLRA AKSA+PPTG+DD+EFL++P+D + TYRT SR+ V+VGP+ + DGG+N+N RL+ +R +L W G
Sbjct: 129 VKIIKEDPLLKLEELDNEKFYLRATAKSAIPPTGLDDLEFLLRPEDKIATYRTASREAVYVGPVLLGDGGANQN-RLDKLRYQLKWDVVG 217
BLAST of mRNA_P-wetherbeei_contig14888.2.1 vs. uniprot
Match: A0A835YQ01_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ01_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 7.290e-22 Identity = 49/88 (55.68%), Postives = 63/88 (71.59%), Query Frame = 1
Query: 7 AVKADSTLKVVDVDVERLYLRAEAKSAVPPTGIDDIEFLIKPDDGLVTYRTKSRDTVFVGPLAVSDGGSNRNSRLEGVRSRLGWPEAG 270
A + DS L+V++ D RLYL EAKS V +DD EF++KP DGLVT+ +KSR V +GP+ VSDGG+ +N RLE +R RLGWP AG
Sbjct: 124 AAEKDSLLRVLEADAGRLYLHCEAKSGVGGD-MDDFEFVVKPGDGLVTFSSKSRSNVTLGPVTVSDGGAMKN-RLETLRYRLGWPSAG 209
BLAST of mRNA_P-wetherbeei_contig14888.2.1 vs. uniprot
Match: A0A4D9D6F4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6F4_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 9.020e-19 Identity = 46/90 (51.11%), Postives = 61/90 (67.78%), Query Frame = 1
Query: 1 VNAVKADSTLKVVDVD--VERLYLRAEAKSAVPPTGIDDIEFLIKPDDGLVTYRTKSRDTVFVGPLA--VSDGGSNRNSRLEGVRSRLGW 258
V AV+A LKVV++D ++ YLRAEA S VPP G+DD+EFL+ P DGLV +R+ SR F+ PL V DGGS + RLE ++ +GW
Sbjct: 21 VRAVEAQEGLKVVEIDNGSKQYYLRAEAPSKVPPGGVDDLEFLLSPKDGLVFFRSASRQMAFLYPLTQPVGDGGSIKK-RLETIQKSVGW 109
BLAST of mRNA_P-wetherbeei_contig14888.2.1 vs. uniprot
Match: A0A7S1IFF5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IFF5_9EUGL) HSP 1 Score: 86.7 bits (213), Expect = 2.330e-18 Identity = 44/90 (48.89%), Postives = 60/90 (66.67%), Query Frame = 1
Query: 1 VNAVKADSTLKVVDVDVERLYLRAEAKSAVPPTGIDDIEFLIKPDDGLVTYRTKSRDTVFVGPLA--VSDGGSNRNSRLEGVRSRLGWPE 264
V +V + +++VD R Y+ A A SAVPPT +DDIEFL++PDD LVT+R +R +VFV PL V D G+ ++ RL +R RLGW E
Sbjct: 213 VESVSEEQGAMLIEVDESRYYIHATAPSAVPPTSLDDIEFLMRPDDSLVTHRVATRKSVFVYPLTQIVGDQGATKD-RLNSIRERLGWAE 301
BLAST of mRNA_P-wetherbeei_contig14888.2.1 vs. uniprot
Match: W7TWW3_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWW3_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 1.870e-17 Identity = 46/90 (51.11%), Postives = 61/90 (67.78%), Query Frame = 1
Query: 1 VNAVKADSTLKVVDVD--VERLYLRAEAKSAVPPTGIDDIEFLIKPDDGLVTYRTKSRDTVFVGPLA--VSDGGSNRNSRLEGVRSRLGW 258
V AV+A LKVV++D ++ YLRAEA S VPP G+DD+EFL+ P DGLV +R+ SR F+ PL V DGGS + RLE ++ +GW
Sbjct: 164 VRAVEAQEGLKVVEIDNGSKQYYLRAEAPSKVPPGGVDDLEFLLSPKDGLVFFRSASRQMAFLYPLTQPVGDGGSIKK-RLETIQKAVGW 252
BLAST of mRNA_P-wetherbeei_contig14888.2.1 vs. uniprot
Match: A0A7S0QPZ6_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QPZ6_9CRYP) HSP 1 Score: 82.4 bits (202), Expect = 8.680e-17 Identity = 43/88 (48.86%), Postives = 58/88 (65.91%), Query Frame = 1
Query: 7 AVKADSTLKVVDVDVERLYLRAEAKSAVPPTGIDDIEFLIKPDDGLVTYRTKSRDTVFVGP--LAVSDGGSNRNSRLEGVRSRLGWPE 264
AV+ D +L+VV V+ YLRAEAKS VP G DD+EFL+ P + +VTYR+ SR V++ P +A+ DGG R R+ G+ LGW E
Sbjct: 162 AVERDPSLRVVQVNDTAFYLRAEAKSKVPQDGTDDVEFLLIPSEKIVTYRSASRQNVYIYPYQVAIPDGGYQRQ-RMRGLLQELGWVE 248
BLAST of mRNA_P-wetherbeei_contig14888.2.1 vs. uniprot
Match: A0A7R9YNQ1_DIALT (Hypothetical protein (Fragment) n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YNQ1_DIALT) HSP 1 Score: 79.3 bits (194), Expect = 4.080e-16 Identity = 40/86 (46.51%), Postives = 59/86 (68.60%), Query Frame = 1
Query: 4 NAVKADSTLKVVDVDVERLYLRAEAKSAVPPTGIDDIEFLIKPDDGLVTYRTKSRDTVFVGPLAVSDGGSN-RNSRLEGVRSRLGW 258
+A+ + L +V+ D LYLRAE+ S+VPPT +DD+EF ++ DGLVTY++++RDTVFV PL G ++ RL +R+RL W
Sbjct: 134 DAIASTPGLTIVESDDAALYLRAESPSSVPPTSVDDLEFALRRSDGLVTYKSETRDTVFVYPLQRPVGCNDCHKKRLPELRTRLRW 219
BLAST of mRNA_P-wetherbeei_contig14888.2.1 vs. uniprot
Match: A0A835YK12_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK12_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 1.310e-15 Identity = 38/77 (49.35%), Postives = 57/77 (74.03%), Query Frame = 1
Query: 34 VVDVDVERLYLRAEAKSAVPPTGIDDIEFLIKPDDGLVTYRTKSRDTVFVGPLA--VSDGGSNRNSRLEGVRSRLGW 258
+VDV+ + LY+ AE + VPP +D +EFL++P D + ++R+ +RD+VFV PL VSD GSNR+ RLE +R++LGW
Sbjct: 83 LVDVNDDNLYILAEFPAKVPPGSVDVVEFLLRPADNVCSFRSATRDSVFVYPLQQPVSDRGSNRD-RLEAIRNQLGW 158
BLAST of mRNA_P-wetherbeei_contig14888.2.1 vs. uniprot
Match: A0A7S2RG67_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RG67_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 2.120e-15 Identity = 45/88 (51.14%), Postives = 56/88 (63.64%), Query Frame = 1
Query: 40 DVDVERLYLRAEAKSAVPPTGIDDIEFLIKPDDGLVTYRTKSRDTVFVGPLA--VSDGGSNRNSRLEGVRSRLGW-----PEAGLNQF 282
DV ERLYL A SAVPP G DD+EF++ P + LV +R+ SR +VF+ PL VSD G + SRL+ VRS LGW + GL QF
Sbjct: 155 DVSTERLYLHVTAPSAVPPAGTDDLEFVLDPKEKLVFFRSASRSSVFLFPLQQPVSDNGRHL-SRLQNVRSTLGWGSLSLEDMGLAQF 241 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14888.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14888.2.1 >prot_P-wetherbeei_contig14888.2.1 ID=prot_P-wetherbeei_contig14888.2.1|Name=mRNA_P-wetherbeei_contig14888.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=94bp VNAVKADSTLKVVDVDVERLYLRAEAKSAVPPTGIDDIEFLIKPDDGLVTback to top mRNA from alignment at P-wetherbeei_contig14888:816..1473- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14888.2.1 ID=mRNA_P-wetherbeei_contig14888.2.1|Name=mRNA_P-wetherbeei_contig14888.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=658bp|location=Sequence derived from alignment at P-wetherbeei_contig14888:816..1473- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14888:816..1473- >mRNA_P-wetherbeei_contig14888.2.1 ID=mRNA_P-wetherbeei_contig14888.2.1|Name=mRNA_P-wetherbeei_contig14888.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=282bp|location=Sequence derived from alignment at P-wetherbeei_contig14888:816..1473- (Phaeothamnion wetherbeei SAG_119_79)back to top |