mRNA_P-wetherbeei_contig1488.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1488.3.1 vs. uniprot
Match: A0A363TRV1_9BRAD (Formate transporter FocA n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TRV1_9BRAD) HSP 1 Score: 322 bits (824), Expect = 2.110e-107 Identity = 167/276 (60.51%), Postives = 208/276 (75.36%), Query Frame = 1
Query: 1 DALLPKEMAEKAERIGADKTRLPVLSLLTLAVLAGAFIAFGSMFSTIAISATDNHLTFGLARVVAGLTFSLGLILVVVGGAELFTGNNLMVMAWAGGKISLGGMLRAWALVYIGNFVGAVATAVMVFLAGVHGNGDAAVGAAALNIAEAKAALPFFPALMRGVLGNVLVCLAVWLCYSAHSTTDRILCIVPPVTAFVAAGFEHSVANMFILPYGLLIKELAEPAFWTAIQQSPASYEALSWGAFFSNLAPVTIGNVIGGGMFVGAVYWFIYLRSRT 828
DALLP+E+AEKAE +G K R ++L L VLAGAFIA G+MF+T ++ ++ L FG++R++AGL F LGLILV++GGAELFTGN LMVMA A GK+SLG MLRAW +VY GN VGA+ TA +VFL+G + D AV AL++A KA LPF AL G+L NVLVCLAVWL A STTD+++ IV PV+AFV AGFEHSVANM+++P GLLIK LA A W+A+ +PA L+ G F+NL PVTIGNVIGGG+ VGAVYWF+YLR+R
Sbjct: 11 DALLPQEVAEKAEALGIQKARRDAVTLFVLGVLAGAFIALGAMFATTVLAGSEGVLPFGVSRLLAGLVFCLGLILVILGGAELFTGNALMVMALAAGKLSLGAMLRAWGIVYAGNLVGALGTAALVFLSGQYLAADGAVARVALSLASDKATLPFDRALFLGILCNVLVCLAVWLALGARSTTDKVMAIVFPVSAFVVAGFEHSVANMYLIPLGLLIKWLAPAALWSALATTPAELGGLTLGGLFANLVPVTIGNVIGGGVLVGAVYWFVYLRTRA 286
BLAST of mRNA_P-wetherbeei_contig1488.3.1 vs. uniprot
Match: A0A5Q4ELK2_9BACT (Formate transporter FocA n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A5Q4ELK2_9BACT) HSP 1 Score: 316 bits (809), Expect = 4.580e-105 Identity = 163/276 (59.06%), Postives = 205/276 (74.28%), Query Frame = 1
Query: 1 DALLPKEMAEKAERIGADKTRLPVLSLLTLAVLAGAFIAFGSMFSTIAISATDNHLTFGLARVVAGLTFSLGLILVVVGGAELFTGNNLMVMAWAGGKISLGGMLRAWALVYIGNFVGAVATAVMVFLAGVHGNGDAAVGAAALNIAEAKAALPFFPALMRGVLGNVLVCLAVWLCYSAHSTTDRILCIVPPVTAFVAAGFEHSVANMFILPYGLLIKELAEPAFWTAIQQSPASYEALSWGAFF-SNLAPVTIGNVIGGGMFVGAVYWFIYLRSR 825
DAL+P EMA +AE IG K L L+ LAVLAGAFI+ G++F+T + L +G+ R++AGL F LGLILVVV GAELFTGNNL+VMAWA K+S+ +LR W +V++GNF GA+AT V++ ++G H G AVGAAAL A+AK L F A+ G+ N LVCLAVW+ YSA +TTDRIL I+ P+TAFVAAGFEHSVANM+ +P GLLI++LA P FWT I Q+ A Y++L+WGAF NL PVT+GN+IGGG+ VG VYWFIYLR R
Sbjct: 8 DALMPPEMAVRAEEIGVRKANLDALTTFVLAVLAGAFISLGAIFATTVTAGAAEVLPWGVTRLLAGLVFCLGLILVVVAGAELFTGNNLIVMAWASRKVSITRLLRNWGVVFVGNFAGALATVVIMHISGQHNFGAGAVGAAALATAKAKVELGFIEAIALGIFCNALVCLAVWMTYSARTTTDRILAILFPITAFVAAGFEHSVANMYFIPIGLLIRDLATPEFWTMIGQASADYDSLTWGAFLLRNLLPVTLGNIIGGGLMVGVVYWFIYLRPR 283
BLAST of mRNA_P-wetherbeei_contig1488.3.1 vs. uniprot
Match: A0A6N6L5J6_9CHLR (Formate transporter FocA n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6N6L5J6_9CHLR) HSP 1 Score: 312 bits (800), Expect = 9.620e-104 Identity = 159/275 (57.82%), Postives = 206/275 (74.91%), Query Frame = 1
Query: 1 DALLPKEMAEKAERIGADKTRLPVLSLLTLAVLAGAFIAFGSMFSTIAISATDNHLTFGLARVVAGLTFSLGLILVVVGGAELFTGNNLMVMAWAGGKISLGGMLRAWALVYIGNFVGAVATAVMVFLAGVHGNGDAAVGAAALNIAEAKAALPFFPALMRGVLGNVLVCLAVWLCYSAHSTTDRILCIVPPVTAFVAAGFEHSVANMFILPYGLLIKELAEPAFWTAIQQSPASYEALSWGAFF-SNLAPVTIGNVIGGGMFVGAVYWFIYLRS 822
DAL+P EMA KAE +G K RL + LAVLAG+FI G++F+T + + + +GL R++ G+ FSLGLILV+VGGAELFTGNNL+VMAWA KI+ G +LR W +VY+GNFVG++ TA ++FL+G + NG AVGA+AL A AKA L F AL+ G+L N LVCLAVWL +SA +TTD+I+ I+PP+ AFVAAGFEHSVANM+ +P GLLIK A P FW +I ++ A Y L+W FF +NL PVTIGN+IGG +FVG VYWF++LR+
Sbjct: 10 DALIPAEMAAKAEAVGVSKARLGKRRMFLLAVLAGSFIGLGAIFATTVAAGSGGIMPYGLTRLLVGIVFSLGLILVIVGGAELFTGNNLIVMAWANQKITTGRLLRNWIVVYLGNFVGSILTAGLLFLSGQYQNGGGAVGASALATANAKAGLGFVEALVLGILCNALVCLAVWLTFSARTTTDKIMAIIPPIAAFVAAGFEHSVANMYFIPVGLLIKSGASPEFWASIGKTAADYPDLTWMNFFITNLVPVTIGNIIGGTLFVGGVYWFLFLRT 284
BLAST of mRNA_P-wetherbeei_contig1488.3.1 vs. uniprot
Match: A0A3D0CXV0_9CHLR (Formate transporter FocA n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3D0CXV0_9CHLR) HSP 1 Score: 313 bits (802), Expect = 1.100e-103 Identity = 158/276 (57.25%), Postives = 204/276 (73.91%), Query Frame = 1
Query: 1 DALLPKEMAEKAERIGADKTRLPVLSLLTLAVLAGAFIAFGSMFSTIAISATDNHLTFGLARVVAGLTFSLGLILVVVGGAELFTGNNLMVMAWAGGKISLGGMLRAWALVYIGNFVGAVATAVMVFLAGVHGNGDAAVGAAALNIAEAKAALPFFPALMRGVLGNVLVCLAVWLCYSAHSTTDRILCIVPPVTAFVAAGFEHSVANMFILPYGLLIKELAEPAFWTAIQQSPASYEALSWGAFF-SNLAPVTIGNVIGGGMFVGAVYWFIYLRSR 825
DALLP EMA KAE++G K + ++S+ LAVLAGAFIA G++F+T ++ + L +G+ R++AG F+LGLILV+VGGAELFTGNNL+VMAWA K+S +LR W +VY+GNFVG+V TA++VF++G G A+G AAL A K L F A+ G+L N LVCLAVWL +SA +TTDRIL I+PP+ AFVAAGFEHSVANM+ +P GL IK A +FW I +SPA Y L+WG F +NL PVT+GN+IGG + VGAVYWF+YLR +
Sbjct: 10 DALLPPEMAAKAEQVGVKKAHMDLVSMFVLAVLAGAFIALGAIFATTVVAGAGDGLPYGVTRLLAGSVFTLGLILVIVGGAELFTGNNLIVMAWANHKVSTDLLLRNWTIVYLGNFVGSVGTALLVFVSGQFTFGQGAIGVAALATASGKVGLSFVQAIALGILCNALVCLAVWLTFSARTTTDRILAIIPPIAAFVAAGFEHSVANMYFVPIGLFIKAGAPASFWATIGKSPADYPGLTWGRFLLNNLLPVTMGNIIGGAILVGAVYWFVYLRPQ 285
BLAST of mRNA_P-wetherbeei_contig1488.3.1 vs. uniprot
Match: H0I3D7_9HYPH (Formate/nitrite transporter n=2 Tax=Mesorhizobium alhagi TaxID=475067 RepID=H0I3D7_9HYPH) HSP 1 Score: 311 bits (798), Expect = 1.250e-103 Identity = 164/268 (61.19%), Postives = 202/268 (75.37%), Query Frame = 1
Query: 22 MAEKAERIGADKTRLPVLSLLTLAVLAGAFIAFGSMFSTIAISATDNHLTFGLARVVAGLTFSLGLILVVVGGAELFTGNNLMVMAWAGGKISLGGMLRAWALVYIGNFVGAVATAVMVFLAGVHGNGDAAVGAAALNIAEAKAALPFFPALMRGVLGNVLVCLAVWLCYSAHSTTDRILCIVPPVTAFVAAGFEHSVANMFILPYGLLIKELAEPAFWTAIQQSPASYEALSWGAFFSNLAPVTIGNVIGGGMFVGAVYWFIYLRSR 825
MA+ AE+IG DKTRL LSLL LAVLAGAFIAFGSMFS I + T+ L +G+ R++ GL FSLGLILVVVGGAELFTGNNLMVMA+A G++ +G +LRAW LVY+GNFVG + A +VFLA + +G AVG AAL AE K +L AL+ G+L NVLVCLA+WLCYSA +TTD+IL IVPPV FVAAGFEHS+ANM++L + LL K A FW AI Q+P+++ L+ A +NL VTIGN++GG + VG YWF+YLR R
Sbjct: 1 MAQAAEQIGVDKTRLDTLSLLALAVLAGAFIAFGSMFSVIVTAGTEGALPYGVIRLLGGLVFSLGLILVVVGGAELFTGNNLMVMAYASGRVGMGEVLRAWGLVYLGNFVGGLGIAALVFLAAGYSHGSGAVGEAALASAETKTSLSALQALIHGILANVLVCLAIWLCYSARTTTDKILAIVPPVAGFVAAGFEHSIANMYLLSFALLTKFGAPSEFWDAISQTPSAFPHLTVVAALANLLWVTIGNMMGG-ILVGVTYWFVYLRKR 267
BLAST of mRNA_P-wetherbeei_contig1488.3.1 vs. uniprot
Match: A0A1F8NLE9_9CHLR (Formate transporter FocA n=1 Tax=Chloroflexi bacterium RBG_13_66_10 TaxID=1797637 RepID=A0A1F8NLE9_9CHLR) HSP 1 Score: 310 bits (795), Expect = 1.010e-102 Identity = 166/287 (57.84%), Postives = 208/287 (72.47%), Query Frame = 1
Query: 1 DALLPKEMAEKAERIGADKTRLPVLSLLTLAVLAGAFIAFGSMFST------IAISATDNHLTF------GLARVVAGLTFSLGLILVVVGGAELFTGNNLMVMAWAGGKISLGGMLRAWALVYIGNFVGAVATAVMVFLAGVHGNGDAAVGAAALNIAEAKAALPFFPALMRGVLGNVLVCLAVWLCYSAHSTTDRILCIVPPVTAFVAAGFEHSVANMFILPYGLLIKELAEPAFWTAIQQSPASYEALSWGAFF-SNLAPVTIGNVIGGGMFVGAVYWFIYLRS 822
DALLP MA +AE IG K RL + + LAVLAGAFIA G++F+T IA+ A D LTF G+ R++ GL F+LGLILV+VGG+ELFTGNNL+VMA+A GK+ LG +LR W +VY+GNFVG++ATA +VFL+ + G A+G L I EAK +L F A+ GVL N LVCLAVWLC+SA STTDRIL I+PP+ AFVAAGFEHS+ANM+ +P L +K+ EPAF+ I ++ A + L+WG FF SNL PVTIGN+IGG + VG VYWFIYLRS
Sbjct: 8 DALLPPAMASRAENIGLVKARLGIRRMFALAVLAGAFIAMGAIFATTVGAGGIAVRAADGTLTFSTGLPYGVVRLLTGLVFTLGLILVIVGGSELFTGNNLIVMAFASGKVGLGQLLRNWTVVYVGNFVGSIATAFVVFLSKQYTFGGGAIGLNVLAIGEAKTSLEFVQAIALGVLCNALVCLAVWLCFSARSTTDRILSIIPPIAAFVAAGFEHSIANMYFIPVALFVKQWGEPAFFQTIGRTAADFPHLTWGGFFVSNLIPVTIGNIIGGAVMVGLVYWFIYLRS 294
BLAST of mRNA_P-wetherbeei_contig1488.3.1 vs. uniprot
Match: A0A7C1IZF4_9CHLR (Formate transporter FocA n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C1IZF4_9CHLR) HSP 1 Score: 309 bits (792), Expect = 1.680e-102 Identity = 162/275 (58.91%), Postives = 204/275 (74.18%), Query Frame = 1
Query: 1 DALLPKEMAEKAERIGADKTRLPVLSLLTLAVLAGAFIAFGSMFSTIAISATDNHLTFGLARVVAGLTFSLGLILVVVGGAELFTGNNLMVMAWAGGKISLGGMLRAWALVYIGNFVGAVATAVMVFLAGVHGNGDAAVGAAALNIAEAKAALPFFPALMRGVLGNVLVCLAVWLCYSAHSTTDRILCIVPPVTAFVAAGFEHSVANMFILPYGLLIKELAEPAFWTAIQQSPASYEALSWGAFF-SNLAPVTIGNVIGGGMFVGAVYWFIYLRS 822
DALLP EMA KAE IG K + +S+ LAVLAGAFI+ G++FST I+ L +G+AR++AGL F+LGLILVVVGGAELFTGNNL+VMAWA GK+S G +L+ W +VY+GNFVGA ATA ++F + G AVG AALN AK+ L F AL GV+ N LVCLAVWL +SA +TTDRI+ I+PP+TAFVAAGFEHSVANM+ +P L IK A FW+AI ++ A + L+W FF +NL PVT+GN++GG + VGAVYWF+YLR+
Sbjct: 9 DALLPAEMASKAETIGVKKAHMNAVSMFVLAVLAGAFISLGAIFSTTVIAGA-GELPYGVARLLAGLVFTLGLILVVVGGAELFTGNNLIVMAWADGKVSAGLLLKNWIIVYLGNFVGAFATAGLMFFTRQYSFGGGAVGLAALNTGNAKSGLDFVQALALGVMCNALVCLAVWLTFSARTTTDRIVAIIPPITAFVAAGFEHSVANMYFIPVALFIKAGAPDTFWSAIGKTAADFTNLTWDKFFLNNLLPVTLGNILGGAVLVGAVYWFVYLRA 282
BLAST of mRNA_P-wetherbeei_contig1488.3.1 vs. uniprot
Match: E8N272_ANATU (Formate/nitrite transporter n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) TaxID=926569 RepID=E8N272_ANATU) HSP 1 Score: 309 bits (792), Expect = 1.680e-102 Identity = 167/281 (59.43%), Postives = 214/281 (76.16%), Query Frame = 1
Query: 1 DALLPKEMAEKAERIGADKTRLPVLSLLTLAVLAGAFIAFGSMFSTIAISATDNHLTFGLARVVAGLTFSLGLILVVVGGAELFTGNNLMVMAWAGGKISLGGMLRAWALVYIGNFVGAVATAVMVFLAGVHGNGDAAVGAAALNIAEAKAALPFFPALMRGVLGNVLVCLAVWLCYSAHSTTDRILCIVPPVTAFVAAGFEHSVANMFILPYGLLIKELAEPAFW--TAIQQS---PASYEALSWGAFF-SNLAPVTIGNVIGGGMFVGAVYWFIYLRSR 825
DALLP EMA+KAE IG K L +LS+ LAVLAGAFIA G++FST +SA + L +G+ R++AGL FSLGL LVVVGGAELFTGN L++MA+A GK+S G +LR W +VY+GNFVG++ATA +VFL+ + G+ VG ALNIA +K+AL F PA+ G+L N LVCLAVWL YSA +TTD+IL I+PP+TAFVAAGFEHS+ANM+ +P GL IK A +FW A++++ S+ AL+WG FF +NL PVT+GN+IGGG+ VG VYWF+YLR
Sbjct: 10 DALLPPEMAKKAEAIGVKKASLDLLSMFALAVLAGAFIAMGAIFST-TVSA-GSTLPYGVTRLLAGLAFSLGLTLVVVGGAELFTGNVLILMAFANGKVSFGALLRNWLVVYLGNFVGSLATAGLVFLSKQYTFGNGVVGLTALNIANSKSALEFVPAVALGILCNALVCLAVWLTYSARTTTDKILAILPPITAFVAAGFEHSIANMYFIPLGLFIKNWAPASFWGLKALEEAGKTAGSFTALTWGNFFVNNLIPVTLGNIIGGGVLVGLVYWFVYLRGH 288
BLAST of mRNA_P-wetherbeei_contig1488.3.1 vs. uniprot
Match: UPI001CD41E6F (formate/nitrite transporter family protein n=2 Tax=Bradyrhizobiaceae TaxID=41294 RepID=UPI001CD41E6F) HSP 1 Score: 309 bits (791), Expect = 2.730e-102 Identity = 166/274 (60.58%), Postives = 203/274 (74.09%), Query Frame = 1
Query: 1 DALLPKEMAEKAERIGADKTRLPVLSLLTLAVLAGAFIAFGSMFSTIAISATDNHLTFGLARVVAGLTFSLGLILVVVGGAELFTGNNLMVMAWAGGKISLGGMLRAWALVYIGNFVGAVATAVMVFLAGVHGNGDAAVGAAALNIAEAKAALPFFPALMRGVLGNVLVCLAVWLCYSAHSTTDRILCIVPPVTAFVAAGFEHSVANMFILPYGLLIKELAEPAFWTAIQQSPASYEALSWGAFFSNLAPVTIGNVIGGGMFVGAVYWFIYLRS 822
DALLP+EMAE+AE+IG DKT L L+ LAVLAGAFIAFGSMFS +A++ + L +G+ R++ G FSLGLILV+VGGAELFTGNNLM+MA A G++ G +LRAW LVYIGNFVGAV AV+VFLA H +G+ AVG AL A+AKA+L AL+ GVL NVLVCLA WLCY A STTD+IL IV P+ AF AAGFEHS+ANM++L +GLL K A+ +FW I ++ S+ L+ SNL VT GN+IGG + VG YWFIYLR
Sbjct: 11 DALLPREMAERAEQIGVDKTHLETGRLMALAVLAGAFIAFGSMFSVVAMAGAEGVLPYGVIRLLGGTVFSLGLILVIVGGAELFTGNNLMIMACASGRVGAGALLRAWTLVYIGNFVGAVGIAVLVFLAAGHAHGNGAVGMTALAGADAKASLSAMQALIHGVLANVLVCLATWLCYGARSTTDKILAIVFPIAAFAAAGFEHSIANMYLLTFGLLTKFGADSSFWGLIGKTSHSFPQLTVLGALSNLIWVTFGNMIGG-VLVGITYWFIYLRG 283
BLAST of mRNA_P-wetherbeei_contig1488.3.1 vs. uniprot
Match: A0A0P6XHP4_9CHLR (Formate transporter n=1 Tax=Thermanaerothrix daxensis TaxID=869279 RepID=A0A0P6XHP4_9CHLR) HSP 1 Score: 305 bits (781), Expect = 7.860e-101 Identity = 160/281 (56.94%), Postives = 211/281 (75.09%), Query Frame = 1
Query: 1 DALLPKEMAEKAERIGADKTRLPVLSLLTLAVLAGAFIAFGSMFSTIAISATDNHLTFGLARVVAGLTFSLGLILVVVGGAELFTGNNLMVMAWAGGKISLGGMLRAWALVYIGNFVGAVATAVMVFLAGVHGNGDAAVGAAALNIAEAKAALPFFPALMRGVLGNVLVCLAVWLCYSAHSTTDRILCIVPPVTAFVAAGFEHSVANMFILPYGLLIKELAEPAFWT--AIQQSPA---SYEALSWGAFF-SNLAPVTIGNVIGGGMFVGAVYWFIYLRSR 825
DAL+P EMA+KAE IG K L S+L L++LAGAFIA G++F+T +SA + L +G+ R++ GL F+LGLILV+VGGAELFTGNNL++MA+ GK++LG ++R W +VY+GNF+G++ATA++VFL+G + G+ A+G ALNIA AK +L F A+ G+L N LVCLAVWLCYSA +TTD+IL I+PP++AFVAAGFEHS+ANM+ +P GL IK+ A +FW A+ S SY L+W FF +NL PVTIGN+IGG VG VYWFIYLR
Sbjct: 10 DALMPPEMAQKAEAIGVKKANLDFWSMLALSILAGAFIALGAIFAT-TVSA-GSTLPYGVTRLLTGLVFTLGLILVIVGGAELFTGNNLIIMAFTSGKVTLGALMRNWVIVYVGNFIGSIATALLVFLSGQYKFGNGAIGLNALNIANAKVSLEFVQAIALGILCNALVCLAVWLCYSARTTTDKILSIIPPISAFVAAGFEHSIANMYFIPIGLFIKQWAPASFWKLQALVDSGKTVESYANLTWVNFFLANLLPVTIGNIIGGAFMVGLVYWFIYLRHH 288 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1488.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1488.3.1 >prot_P-wetherbeei_contig1488.3.1 ID=prot_P-wetherbeei_contig1488.3.1|Name=mRNA_P-wetherbeei_contig1488.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=270bp MAEKAERIGADKTRLPVLSLLTLAVLAGAFIAFGSMFSTIAISATDNHLTback to top mRNA from alignment at P-wetherbeei_contig1488:1284..2114+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1488.3.1 ID=mRNA_P-wetherbeei_contig1488.3.1|Name=mRNA_P-wetherbeei_contig1488.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=831bp|location=Sequence derived from alignment at P-wetherbeei_contig1488:1284..2114+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1488:1284..2114+ >mRNA_P-wetherbeei_contig1488.3.1 ID=mRNA_P-wetherbeei_contig1488.3.1|Name=mRNA_P-wetherbeei_contig1488.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=810bp|location=Sequence derived from alignment at P-wetherbeei_contig1488:1284..2114+ (Phaeothamnion wetherbeei SAG_119_79)back to top |