mRNA_P-wetherbeei_contig14878.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14878.2.1
Unique NamemRNA_P-wetherbeei_contig14878.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14878.2.1 vs. uniprot
Match: D8LNZ5_ECTSI (Kinesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNZ5_ECTSI)

HSP 1 Score: 277 bits (708), Expect = 2.510e-85
Identity = 174/253 (68.77%), Postives = 192/253 (75.89%), Query Frame = 1
Query:    1 DDVEIRHSKFHFVDLAGSERAKRTGAQGQRFREGIEINKGLLTLGNVISALGDDSKRGKVHVPYRDSKLTRMLQDSLGGNSQTLMICCVSPAEPNMHETLSALRYANRARNIQNTPVLNRDHNSAIINDLRQRVALLAAELIRIRGGGNGGXXXXXXXXXXXXXSLSAEMLREMAVA-TPGK----PLRPLAIAXXXXXXXXXXXLRELPALRARAAEAEAAVQQLTEELKRQRLAAETSAERLAAACAERDL 744
            DDVEIR SKFHFVDLAGSERAKRTGA GQRF+EG++INKGLLTLGNVISALGDD+KRGKVHVPYRDSKLTRMLQDSLGGNSQTLMICCVSP+E NMHETLSALRYANRARNIQN PV+NRD NS +IN+LR++V  LAAEL+RIR G      XXXXXXXXXXX +SAE LRE+A A TP +    PL   + +            REL  LRAR AEAE  V +LTEE K  R       + LA   AE DL
Sbjct:  243 DDVEIRRSKFHFVDLAGSERAKRTGASGQRFKEGVDINKGLLTLGNVISALGDDTKRGKVHVPYRDSKLTRMLQDSLGGNSQTLMICCVSPSESNMHETLSALRYANRARNIQNKPVVNRDANSMVINELREKVQALAAELLRIRSG------XXXXXXXXXXXDVSAETLRELAAASTPARQSPRPLARASFSRSGPLDASAPVQRELTMLRARVAEAEGEVVRLTEETKLARKRESDKDDALAGVRAELDL 489          
BLAST of mRNA_P-wetherbeei_contig14878.2.1 vs. uniprot
Match: A0A835YP33_9STRA (Kinesin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP33_9STRA)

HSP 1 Score: 240 bits (613), Expect = 4.030e-74
Identity = 117/134 (87.31%), Postives = 128/134 (95.52%), Query Frame = 1
Query:    1 DDVEIRHSKFHFVDLAGSERAKRTGAQGQRFREGIEINKGLLTLGNVISALGDDSKRGKVHVPYRDSKLTRMLQDSLGGNSQTLMICCVSPAEPNMHETLSALRYANRARNIQNTPVLNRDHNSAIINDLRQRV 402
            DD+EIR SKFHFVDLAGSERAKRTGA+GQRFREGIEINKGLLTLGNVISALGD++KRGKVHVPYRDSKLTRMLQDSLGGNSQTLMICCVSPAE NMHET+SALRYANRARNIQN P++NRDHNS II +L+ ++
Sbjct:  272 DDLEIRKSKFHFVDLAGSERAKRTGAEGQRFREGIEINKGLLTLGNVISALGDEAKRGKVHVPYRDSKLTRMLQDSLGGNSQTLMICCVSPAEVNMHETISALRYANRARNIQNKPIVNRDHNSTIIAELKAQI 405          
BLAST of mRNA_P-wetherbeei_contig14878.2.1 vs. uniprot
Match: A0A7S1UH50_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UH50_9STRA)

HSP 1 Score: 214 bits (546), Expect = 1.560e-67
Identity = 106/139 (76.26%), Postives = 125/139 (89.93%), Query Frame = 1
Query:   22 SKFHFVDLAGSERAKRTGAQGQRFREGIEINKGLLTLGNVISALGDDSKRGKVHVPYRDSKLTRMLQDSLGGNSQTLMICCVSPAEPNMHETLSALRYANRARNIQNTPVLNRDHNSAIINDLRQRVALLAAELIRIRG 438
            SKFHFVDLAGSERAKRTGA G+R REGI+IN+GLLTLGNVISALGDD KRG+VHVPYRDSKLTRMLQDSLGGNS+T+MICCVSP++ N+ E+L+ALRYANRARNIQN PV+NRD  +A+I ++R  +A LA+EL+  RG
Sbjct:   11 SKFHFVDLAGSERAKRTGATGKRLREGIDINRGLLTLGNVISALGDDKKRGRVHVPYRDSKLTRMLQDSLGGNSKTVMICCVSPSDSNLSESLNALRYANRARNIQNRPVVNRDPKNAMILEMRALIARLASELVVRRG 149          
BLAST of mRNA_P-wetherbeei_contig14878.2.1 vs. uniprot
Match: A0A7S4D722_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D722_HETAK)

HSP 1 Score: 209 bits (531), Expect = 4.980e-65
Identity = 103/143 (72.03%), Postives = 121/143 (84.62%), Query Frame = 1
Query:    7 VEIRHSKFHFVDLAGSERAKRTGAQGQRFREGIEINKGLLTLGNVISALGDDSKRGKVHVPYRDSKLTRMLQDSLGGNSQTLMICCVSPAEPNMHETLSALRYANRARNIQNTPVLNRDHNSAIINDLRQRVALLAAELIRIR 435
            VE R SKFHFVDLAGSER K+TGA GQR REGI+INKGLL LGNVISALGD   RG+VHVPYRDSKLTR+LQDSLGGNS+TL ICC SPA+ N HET +AL YANRARNI+N PV+NRD  SA++ ++R+++ LLA EL+R +
Sbjct:    4 VETRRSKFHFVDLAGSERIKKTGATGQRLREGIDINKGLLVLGNVISALGDPRLRGRVHVPYRDSKLTRLLQDSLGGNSKTLFICCCSPADTNAHETEAALAYANRARNIRNRPVVNRDAASALLAEMRRQLQLLATELLRAK 146          
BLAST of mRNA_P-wetherbeei_contig14878.2.1 vs. uniprot
Match: A0A7R9YCA0_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCA0_9STRA)

HSP 1 Score: 209 bits (533), Expect = 3.590e-62
Identity = 102/135 (75.56%), Postives = 121/135 (89.63%), Query Frame = 1
Query:   22 SKFHFVDLAGSERAKRTGAQGQRFREGIEINKGLLTLGNVISALGDDSKRGKVHVPYRDSKLTRMLQDSLGGNSQTLMICCVSPAEPNMHETLSALRYANRARNIQNTPVLNRDHNSAIINDLRQRVALLAAELI 426
            SKFHFVDLAGSERAKRTGA G+R REGI+IN+GLLTLGNVISALGD+ KRG+VHVPYRDSKLTRMLQDSLGGNS+T+MICCVSP++ NM E+L+ALRYANRARNIQN PV+NRD  + +I ++RQ +  LA E++
Sbjct:   18 SKFHFVDLAGSERAKRTGATGKRLREGIDINRGLLTLGNVISALGDEKKRGRVHVPYRDSKLTRMLQDSLGGNSKTVMICCVSPSDSNMSESLNALRYANRARNIQNRPVVNRDPKNTMIIEMRQLIGRLAKEVL 152          
BLAST of mRNA_P-wetherbeei_contig14878.2.1 vs. uniprot
Match: A0A8K1FFE2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFE2_PYTOL)

HSP 1 Score: 214 bits (544), Expect = 7.750e-60
Identity = 106/148 (71.62%), Postives = 127/148 (85.81%), Query Frame = 1
Query:    1 DDVEIRHSKFHFVDLAGSERAKRTGAQGQRFREGIEINKGLLTLGNVISALGDDSKRGKVHVPYRDSKLTRMLQDSLGGNSQTLMICCVSPAEPNMHETLSALRYANRARNIQNTPVLNRDHNSAIINDLRQRVALLAAELIRIRGGG 444
            DD E R S F+FVDLAGSER KRT A+G+R +EGI+INKGLL LGNVISALGDD KRG+VHVPYRDSKLTRMLQDSLGGNS+TLM+CCVSPA+ N  ETL+AL+YANRARNI+N PV+NRD +SA+  +LR++V +L AE+ R+R  G
Sbjct:  245 DDFETRTSYFNFVDLAGSERQKRTQAEGKRLKEGIDINKGLLALGNVISALGDDKKRGRVHVPYRDSKLTRMLQDSLGGNSRTLMLCCVSPADVNFEETLNALKYANRARNIKNKPVVNRDESSALAVELRRQVQMLQAEVFRLRNPG 392          
BLAST of mRNA_P-wetherbeei_contig14878.2.1 vs. uniprot
Match: A0A662XTH4_9STRA (Kinesin motor domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XTH4_9STRA)

HSP 1 Score: 206 bits (524), Expect = 5.430e-59
Identity = 104/147 (70.75%), Postives = 123/147 (83.67%), Query Frame = 1
Query:    4 DVEIRHSKFHFVDLAGSERAKRTGAQGQRFREGIEINKGLLTLGNVISALGDDSKRGKVHVPYRDSKLTRMLQDSLGGNSQTLMICCVSPAEPNMHETLSALRYANRARNIQNTPVLNRDHNSAIINDLRQRVALLAAELIRIRGGG 444
            D E R+S F+FVDLAGSER KRT A+G+R +EGI+INKGLL LGNVISALGDD KRGKVHVPYRDSKLTRMLQDSLGGNS+TLM+ CVSPA+ N  ETL+AL+YANRARNIQN PV+NRD  S +  +LR++V +L  E+ R+R  G
Sbjct:  247 DFETRNSYFNFVDLAGSERQKRTQAEGKRLKEGIDINKGLLALGNVISALGDDKKRGKVHVPYRDSKLTRMLQDSLGGNSRTLMLTCVSPADVNFEETLNALKYANRARNIQNKPVVNRDEASTMTMELRRQVQMLQMEVHRLRNPG 393          
BLAST of mRNA_P-wetherbeei_contig14878.2.1 vs. uniprot
Match: A0A6H5KW93_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW93_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 9.500e-59
Identity = 102/112 (91.07%), Postives = 109/112 (97.32%), Query Frame = 1
Query:    1 DDVEIRHSKFHFVDLAGSERAKRTGAQGQRFREGIEINKGLLTLGNVISALGDDSKRGKVHVPYRDSKLTRMLQDSLGGNSQTLMICCVSPAEPNMHETLSALRYANRARNI 336
            DDVEIR SKFHFVDLAGSERAKRTGA GQRF+EG++INKGLLTLGNVISALGDD+KRGKVHVPYRDSKLTRMLQDSLGGNSQTLMICCVSP+E NMHETLSALRYANRAR++
Sbjct:  243 DDVEIRRSKFHFVDLAGSERAKRTGASGQRFKEGVDINKGLLTLGNVISALGDDTKRGKVHVPYRDSKLTRMLQDSLGGNSQTLMICCVSPSESNMHETLSALRYANRARDV 354          
BLAST of mRNA_P-wetherbeei_contig14878.2.1 vs. uniprot
Match: A0A2P4XIP4_9STRA (Kinesin-like protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XIP4_9STRA)

HSP 1 Score: 207 bits (527), Expect = 3.550e-58
Identity = 105/147 (71.43%), Postives = 124/147 (84.35%), Query Frame = 1
Query:    4 DVEIRHSKFHFVDLAGSERAKRTGAQGQRFREGIEINKGLLTLGNVISALGDDSKRGKVHVPYRDSKLTRMLQDSLGGNSQTLMICCVSPAEPNMHETLSALRYANRARNIQNTPVLNRDHNSAIINDLRQRVALLAAELIRIRGGG 444
            D E R+S F+FVDLAGSER KRT A+G+R +EGI+INKGLL LGNVISALGDD KRGKVHVPYRDSKLTRMLQDSLGGNS+TLM+ CVSPA+ N  ETL+AL+YANRARNIQN PV+NRD  SA+  +LR++V +L  E+ R+R  G
Sbjct:   21 DYETRNSYFNFVDLAGSERQKRTQAEGKRLKEGIDINKGLLALGNVISALGDDKKRGKVHVPYRDSKLTRMLQDSLGGNSRTLMLTCVSPADVNFEETLNALKYANRARNIQNKPVVNRDEASAMTLELRRQVQMLQMEVHRLRNPG 167          
BLAST of mRNA_P-wetherbeei_contig14878.2.1 vs. uniprot
Match: A0A7S4MLF7_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MLF7_9STRA)

HSP 1 Score: 198 bits (504), Expect = 7.000e-58
Identity = 99/148 (66.89%), Postives = 119/148 (80.41%), Query Frame = 1
Query:    1 DDVEIRHSKFHFVDLAGSERAKRTGAQGQRFREGIEINKGLLTLGNVISALGDDSKRGKVHVPYRDSKLTRMLQDSLGGNSQTLMICCVSPAEPNMHETLSALRYANRARNIQNTPVLNRDHNSAIINDLRQRVALLAAELIRIRGGG 444
            ++VE++ SKFHFVDLAGSER KRT A+G+R +EGI+INKGLL LGNVISALGD  KRGK  VPYRDSKLTR+L+ SLGGN +TLMI CVSPA  N+ E+L+ LRYANRARNIQN  V+N D  S ++ +LR  V  LA EL+R+R GG
Sbjct:  205 EEVEVKRSKFHFVDLAGSERQKRTNAEGRRLKEGIDINKGLLVLGNVISALGDPKKRGKTFVPYRDSKLTRLLKGSLGGNHRTLMIACVSPASTNLEESLNCLRYANRARNIQNRAVVNLDAGSRLMAELRGHVRTLATELLRVRDGG 352          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14878.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNZ5_ECTSI2.510e-8568.77Kinesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A835YP33_9STRA4.030e-7487.31Kinesin-like protein n=1 Tax=Tribonema minus TaxID... [more]
A0A7S1UH50_9STRA1.560e-6776.26Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S4D722_HETAK4.980e-6572.03Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7R9YCA0_9STRA3.590e-6275.56Kinesin-like protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A8K1FFE2_PYTOL7.750e-6071.62Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662XTH4_9STRA5.430e-5970.75Kinesin motor domain-containing protein (Fragment)... [more]
A0A6H5KW93_9PHAE9.500e-5991.07Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A2P4XIP4_9STRA3.550e-5871.43Kinesin-like protein n=1 Tax=Phytophthora palmivor... [more]
A0A7S4MLF7_9STRA7.000e-5866.89Kinesin-like protein (Fragment) n=1 Tax=Odontella ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14878contigP-wetherbeei_contig14878:162..986 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LNZ5
PFAMsKinesin
Model size744
Max annot lvl2759|Eukaryota
KEGG koko:K10395
Hectar predicted targeting categoryother localisation
Exons2
Evalue4.11e-86
EggNOG OGsCOG5059@1|root,KOG0244@2759|Eukaryota
Descriptionmicrotubule motor activity
Cds size744
COG categoryZ
BRITEko00000,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186036.2651942-CDS-P-wetherbeei_contig14878:161..7441683186036.2651942-CDS-P-wetherbeei_contig14878:161..744Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14878 162..744 +
1683186036.276765-CDS-P-wetherbeei_contig14878:825..9861683186036.276765-CDS-P-wetherbeei_contig14878:825..986Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14878 826..986 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14878.2.1prot_P-wetherbeei_contig14878.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14878 162..986 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14878.2.1

>prot_P-wetherbeei_contig14878.2.1 ID=prot_P-wetherbeei_contig14878.2.1|Name=mRNA_P-wetherbeei_contig14878.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=248bp
DDVEIRHSKFHFVDLAGSERAKRTGAQGQRFREGIEINKGLLTLGNVISA
LGDDSKRGKVHVPYRDSKLTRMLQDSLGGNSQTLMICCVSPAEPNMHETL
SALRYANRARNIQNTPVLNRDHNSAIINDLRQRVALLAAELIRIRGGGNG
GGSGGGDGSGGDDGSLSAEMLREMAVATPGKPLRPLAIAAAGANAAGAAA
LRELPALRARAAEAEAAVQQLTEELKRQRLAAETSAERLAAACAERDL
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mRNA from alignment at P-wetherbeei_contig14878:162..986+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14878.2.1 ID=mRNA_P-wetherbeei_contig14878.2.1|Name=mRNA_P-wetherbeei_contig14878.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=825bp|location=Sequence derived from alignment at P-wetherbeei_contig14878:162..986+ (Phaeothamnion wetherbeei SAG_119_79)
GACGACGTGGAAATCCGGCACTCGAAGTTCCACTTCGTCGATCTGGCCGG GTCGGAGCGGGCGAAACGAACGGGCGCCCAGGGGCAGCGTTTTAGGGAGG GTATTGAGATCAACAAGGGCCTGCTGACGCTGGGAAACGTCATCAGCGCC CTCGGCGATGACAGCAAGCGGGGCAAGGTGCACGTGCCGTACCGGGATTC CAAGCTGACCCGCATGCTGCAGGATTCACTTGGCGGCAACAGCCAGACCC TCATGATCTGCTGCGTGTCGCCCGCCGAGCCCAACATGCACGAGACGCTC TCGGCGCTGCGGTACGCCAACCGGGCGCGCAACATCCAGAACACGCCGGT GCTGAACCGCGACCACAACTCGGCCATCATCAACGACCTCCGGCAGCGTG TGGCGCTTTTGGCCGCCGAGCTGATTCGCATCCGCGGTGGCGGCAATGGC GGCGGCTCCGGAGGTGGCGACGGGAGCGGCGGCGACGATGGGAGCCTTTC GGCGGAGATGCTTCGGGAGATGGCAGTCGCGACGCCGGGCAAGCCGTTGC GGCCACTAGCCATCGCGGCCGCGGGGGCCAATGGTGCCAGCGGCAGCGGC TGGGGCTTCGGTGGTGGCGACGGTGGTAGCGGAGCGAACGGTGGTGGCGG CGGTAGCCGGGGAGCGGCGGGGGCGGCGGCGCTGCGAGAGCTGCCTGCGC TACGGGCGCGCGCCGCGGAGGCCGAGGCGGCGGTGCAGCAGCTGACAGAG GAACTGAAGCGGCAGCGGCTCGCCGCTGAAACGTCCGCCGAGCGGCTAGC GGCTGCCTGCGCCGAAAGGGATCTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14878:162..986+

>mRNA_P-wetherbeei_contig14878.2.1 ID=mRNA_P-wetherbeei_contig14878.2.1|Name=mRNA_P-wetherbeei_contig14878.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=744bp|location=Sequence derived from alignment at P-wetherbeei_contig14878:162..986+ (Phaeothamnion wetherbeei SAG_119_79)
GACGACGTGGAAATCCGGCACTCGAAGTTCCACTTCGTCGATCTGGCCGG
GTCGGAGCGGGCGAAACGAACGGGCGCCCAGGGGCAGCGTTTTAGGGAGG
GTATTGAGATCAACAAGGGCCTGCTGACGCTGGGAAACGTCATCAGCGCC
CTCGGCGATGACAGCAAGCGGGGCAAGGTGCACGTGCCGTACCGGGATTC
CAAGCTGACCCGCATGCTGCAGGATTCACTTGGCGGCAACAGCCAGACCC
TCATGATCTGCTGCGTGTCGCCCGCCGAGCCCAACATGCACGAGACGCTC
TCGGCGCTGCGGTACGCCAACCGGGCGCGCAACATCCAGAACACGCCGGT
GCTGAACCGCGACCACAACTCGGCCATCATCAACGACCTCCGGCAGCGTG
TGGCGCTTTTGGCCGCCGAGCTGATTCGCATCCGCGGTGGCGGCAATGGC
GGCGGCTCCGGAGGTGGCGACGGGAGCGGCGGCGACGATGGGAGCCTTTC
GGCGGAGATGCTTCGGGAGATGGCAGTCGCGACGCCGGGCAAGCCGTTGC
GGCCACTAGCCATCGCGGCCGCGGGGGCCAATGCGGCGGGGGCGGCGGCG
CTGCGAGAGCTGCCTGCGCTACGGGCGCGCGCCGCGGAGGCCGAGGCGGC
GGTGCAGCAGCTGACAGAGGAACTGAAGCGGCAGCGGCTCGCCGCTGAAA
CGTCCGCCGAGCGGCTAGCGGCTGCCTGCGCCGAAAGGGATCTC
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