mRNA_P-wetherbeei_contig14869.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14869.1.1
Unique NamemRNA_P-wetherbeei_contig14869.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig14869.1.1 vs. uniprot
Match: A0A836CJU3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJU3_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.870e-11
Identity = 38/83 (45.78%), Postives = 61/83 (73.49%), Query Frame = 1 
Query:  286 LVRLRERIKERLGRDGVETAARALRGLMDGDRNSRVDRSELRYGLREVGVNVSSSELEALFAHFDADRNGCLSYEELLNGLRG 534
            + ++R+R   R G DG+   AR LR +MD D + R+DR+EL++GLR+ GV +S++EL+ + AHFDA+ +G +S++E L G+RG
Sbjct:   94 VAKVRQRCVARGGGDGLHALARLLR-VMDNDGDGRLDRTELKWGLRDCGVALSAAELDRVCAHFDANGDGFVSFDEFLAGMRG 175
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BLAST of mRNA_P-wetherbeei_contig14869.1.1 vs. uniprot
Match: A0A2R5GMX4_9STRA (Calcium-dependent protein kinase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMX4_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.920e-11
Identity = 36/91 (39.56%), Postives = 64/91 (70.33%), Query Frame = 1 
Query:  283 TLVRLRERIKERLGRDGVETAARALRGLMDGDRNSRVDRSELRYGLREVGVNVSSSELEALFAHFDADRNGCLSYEELLNGLRGEDQRRSI 555
            ++ RLRE++KER G +G+ + +R LR +MD   +  + R+EL+YGL++ G+ ++++EL+ LF   D DR+G +S++E L G+RG   +R +
Sbjct:  257 SMDRLREKVKERGGANGINSLSRLLR-IMDDSGDGCLSRTELKYGLQDYGIRINNAELDELFTFLDRDRSGKISFDEFLAGMRGPLSKRRL 346
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BLAST of mRNA_P-wetherbeei_contig14869.1.1 vs. uniprot
Match: A0A482RPE9_9ARCH (DUF4496 domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RPE9_9ARCH)

HSP 1 Score: 74.7 bits (182), Expect = 9.480e-11
Identity = 37/90 (41.11%), Postives = 64/90 (71.11%), Query Frame = 1 
Query:  292 RLRERIKERLGRDGVETAARALRGLMDGDRNSRVDRSELRYGLREVGVNVSSSELEALFAHFDADRNGCLSYEELLNGLRGE--DQRRSI 555
            ++R +I ER G +G+ + A+ L  +MD + + R+++ ELRYGLR+ G++++ +ELE +F +FD DRNG +   E L G++G+  ++RRSI
Sbjct:  365 KVRTKIIERGGSNGIRSVAKLL-SIMDDNGDKRLNKEELRYGLRDFGIDLTPTELEQVFMYFDRDRNGFIDLTEFLVGIKGDINERRRSI 453
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BLAST of mRNA_P-wetherbeei_contig14869.1.1 vs. uniprot
Match: W4GM18_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GM18_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.520e-7
Identity = 39/93 (41.94%), Postives = 56/93 (60.22%), Query Frame = 1 
Query:  283 TLVRLRERIKERLGRDGVETAARALRGLMDGDRNSRVDRSELRYGLREVGVNVSSSELEALFAHFDADRNGCLSYEELLNGLRGE--DQRRSI 555
            TL  LR  + E  G  G+    R  R +MD D +  +D +E    +RE G+ +SSSE+  LFA FD DR+G +SY+E L G+RG+  D+RR +
Sbjct:  298 TLTALRTSLYEH-GARGIVGLGRKFR-IMDDDNSRTLDLAEFSKAIREHGLPLSSSEVADLFAFFDGDRSGHISYDEFLTGIRGDLNDRRRQL 388
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BLAST of mRNA_P-wetherbeei_contig14869.1.1 vs. uniprot
Match: A0A8K1CHA2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHA2_PYTOL)

HSP 1 Score: 62.4 bits (150), Expect = 5.210e-7
Identity = 37/98 (37.76%), Postives = 59/98 (60.20%), Query Frame = 1 
Query:  271 AGAATLVRLRERIKERLGRDGVETAARALRGLMDGDRNSRVDRSELRYGLREVGVNVSSSE---LEALFAHFDADRNGCLSYEELLNGLRGEDQRRSI 555
            A  + L R+RERI +  G++G+ T  R L   MD + ++ +D  E   GL ++G+ V  ++   LE +F HFD DR+G ++ +EL+ GLRG   +R I
Sbjct:  105 AAKSLLERVRERILDAGGKNGLRTL-RVLLRRMDQNGDNLIDPEEFASGLEQLGLRVREADRTQLENVFRHFDRDRSGRITVDELMRGLRGAMPKRRI 201
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BLAST of mRNA_P-wetherbeei_contig14869.1.1 vs. uniprot
Match: A0A2D4CAG5_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAG5_PYTIN)

HSP 1 Score: 62.4 bits (150), Expect = 1.220e-6
Identity = 32/86 (37.21%), Postives = 53/86 (61.63%), Query Frame = 1 
Query:  283 TLVRLRERIKERLGRDGVETAARALRGLMDGDRNSRVDRSELRYGLREVGVNVSSSELEALFAHFDADRNGCLSYEELLNGLRGED 540
            T+ R+R ++  R G +G+    R L  L+D   +  +   EL++GLR++GV ++ SEL A+  + D D++G ++  ELL  LRGED
Sbjct: 1297 TVARVRAKLLSRCGENGLXALHRVL-ALLDTSGDGVLSAQELKFGLRDLGVELTPSELSAVMKYLDKDQDGHVTLTELLEALRGED 1381
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BLAST of mRNA_P-wetherbeei_contig14869.1.1 vs. uniprot
Match: A0A397DXN7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DXN7_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 2.230e-6
Identity = 30/65 (46.15%), Postives = 44/65 (67.69%), Query Frame = 1 
Query:  367 MDGDRNSRVDRSELRYGLREVGVNVSSSELEALFAHFDADRNGCLSYEELLNGLRGE--DQRRSI 555
            MD D +  +D +E    +RE G+ +SSSE+  LFA FD DR+G +SY+E L G+RG+  D+RR +
Sbjct:    1 MDDDNSRTLDLAEFSKAIREHGLPLSSSEVADLFAFFDDDRSGHISYDEFLTGIRGDLNDRRRQL 65
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BLAST of mRNA_P-wetherbeei_contig14869.1.1 vs. uniprot
Match: A0A7S1CA09_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CA09_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 1.810e-5
Identity = 24/58 (41.38%), Postives = 38/58 (65.52%), Query Frame = 1 
Query:  364 LMDGDRNSRVDRSELRYGLREVGVNVSSSELEALFAHFDADRNGCLSYEELLNGLRGE 537
            +MD DR+  +   E +  +R+VG+N S +E+ ALF+ FD D  G + YEE L+ +RG+
Sbjct:    1 IMDDDRSRSLSAYEFKKAMRDVGMNASEAEVNALFSAFDKDGGGTIDYEEFLSAVRGK 58
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BLAST of mRNA_P-wetherbeei_contig14869.1.1 vs. uniprot
Match: A0A482SPU5_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SPU5_9ARCH)

HSP 1 Score: 56.6 bits (135), Expect = 4.410e-5
Identity = 30/91 (32.97%), Postives = 57/91 (62.64%), Query Frame = 1 
Query:  268 VAGAATLVR-LRERIKERLGRDGVETAARALRGLMDGDRNSRVDRSELRYGLREVGVNVSSSELEALFAHFDADRNGCLSYEELLNGLRGE 537
            V+   TL+  LRE +K+  G  G+   +R  R ++D + N ++D  E    + E  +  ++++++A+F HFD D++G +S++E LNG+RG+
Sbjct:  181 VSSVDTLMEILRESLKKH-GASGIAGLSRKFR-IVDDNGNGQIDIKEFSKAIGEHALGWTAAQVKAIFDHFDKDKSGAISFDEFLNGVRGQ 269
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14869.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A836CJU3_9STRA1.870e-1145.78Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A2R5GMX4_9STRA1.920e-1139.56Calcium-dependent protein kinase n=1 Tax=Hondaea f... [more]
A0A482RPE9_9ARCH9.480e-1141.11DUF4496 domain-containing protein (Fragment) n=1 T... [more]
W4GM18_9STRA1.520e-741.94Uncharacterized protein n=9 Tax=Aphanomyces astaci... [more]
A0A8K1CHA2_PYTOL5.210e-737.76Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4CAG5_PYTIN1.220e-637.21Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A397DXN7_9STRA2.230e-646.15Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A7S1CA09_9STRA1.810e-541.38Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A482SPU5_9ARCH4.410e-532.97Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14869contigP-wetherbeei_contig14869:4..1509 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog115417.EPrPW00000025810
PFAMsDUF4496,EF-hand_5,EF-hand_7
Model size1259
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons2
Evalue4.89e-10
EggNOG OGsKOG0032@1|root,KOG0032@2759|Eukaryota,1MAXB@121069|Pythiales
DescriptionSource PGD
Cds size1257
COG categoryT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186036.1043553-CDS-P-wetherbeei_contig14869:3..4321683186036.1043553-CDS-P-wetherbeei_contig14869:3..432Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14869 4..432 +
1683186036.1149938-CDS-P-wetherbeei_contig14869:681..15091683186036.1149938-CDS-P-wetherbeei_contig14869:681..1509Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14869 682..1509 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14869.1.1prot_P-wetherbeei_contig14869.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14869 4..1509 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14869.1.1

>prot_P-wetherbeei_contig14869.1.1 ID=prot_P-wetherbeei_contig14869.1.1|Name=mRNA_P-wetherbeei_contig14869.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=419bp
YGRGGTYERKRADGPAARTGTFTTAAVAAATNAAAAAGAAATDRSTHRRR
PASADTHVVASEALRRAGGGNRNNNNNNAGNSGAHGAWGVAGAATLVRLR
ERIKERLGRDGVETAARALRGLMDGDRNSRVDRSELRYGLREVGVNVSSS
ELEALFAHFDADRNGCLSYEELLNGLRGEDQRRSIGSGGGRRHAWGDEAA
SPARRSRQDYAGGGEGIGAEGSIIDERRLQREAQRQYCRARSSEEQRRHG
GQGVQSAGSFFEEGDGGGFAIGGGGRGSGGHRDGNGYGGSDHHSSGGDGS
GSNCRNDHDGKRVFGAERNSNTAGGMVTSLAAAAVTTKNARSPDGAAAGA
QQAASHSDDPIAALAAIVYSPPCTLEQLIGRLQASQVQEQPAVAVAALAA
RLCQLRPVLGRRGAAALAA
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mRNA from alignment at P-wetherbeei_contig14869:4..1509+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14869.1.1 ID=mRNA_P-wetherbeei_contig14869.1.1|Name=mRNA_P-wetherbeei_contig14869.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1506bp|location=Sequence derived from alignment at P-wetherbeei_contig14869:4..1509+ (Phaeothamnion wetherbeei SAG_119_79)
TACGGTCGCGGTGGCACTTACGAGCGGAAGAGGGCCGACGGTCCTGCTGC
CCGCACAGGTACCTTTACGACCGCCGCTGTGGCCGCCGCCACCAACGCTG
CAGCTGCCGCCGGCGCCGCTGCCACCGACCGCAGCACTCACCGCCGCCGG
CCAGCGAGCGCCGATACGCACGTCGTGGCGTCGGAGGCGCTGCGCCGCGC
CGGCGGCGGTAACAGAAACAATAACAACAACAACGCCGGCAACAGCGGCG
CGCACGGCGCATGGGGAGTGGCGGGGGCAGCGACGCTGGTGCGGCTGCGG
GAAAGAATTAAAGAACGGCTGGGGCGTGACGGCGTCGAGACGGCAGCACG
TGCGCTGCGGGGCCTGATGGACGGCGACCGCAACAGCCGCGTCGATCGCT
CCGAGCTGCGCTACGGCCTCCGCGAAGTGGTGCGTTTTCCACCATTCTTC
TACCTTTTCCTCCACCGGGCTGCGTGCCTCCCGGTATCTGAGGTTGATGC
GACAGCTTAATGTTCCTGCTGGTTATGTATGCGCTTGCTCAGAACCTGCA
TCTACCTTCCAAAATGATTTAAAGGCCTCCCTTCCTTCTCTGTCTGTCTC
ATCTTCCTCTTCTCCCTTTCTGACCCTCTTCCTCTTTCTTCCCACCTCTT
CAAATTTTGTGGTCGCGAACGGGACCAGGGCGTGAACGTGTCATCTTCCG
AGCTGGAAGCGCTCTTCGCTCACTTCGACGCCGACCGCAATGGCTGCCTC
TCATACGAGGAGCTTCTGAACGGACTGCGGGGCGAAGACCAGCGCAGATC
CATCGGCAGTGGCGGAGGTAGAAGGCACGCATGGGGTGACGAGGCGGCAT
CGCCAGCCCGACGCTCCCGCCAGGACTACGCCGGCGGGGGCGAAGGCATC
GGCGCCGAGGGCAGCATAATCGACGAGAGGCGGCTGCAAAGAGAAGCGCA
GCGGCAGTACTGCCGCGCCCGCAGCAGCGAAGAGCAGCGGCGGCACGGCG
GCCAGGGCGTGCAGAGCGCCGGCTCCTTTTTTGAAGAAGGCGACGGCGGT
GGCTTCGCCATTGGTGGCGGTGGTCGTGGCAGCGGCGGTCACCGTGATGG
CAACGGCTACGGCGGCAGCGATCATCACAGTAGCGGCGGAGATGGCAGCG
GCAGCAACTGTCGGAACGATCACGATGGCAAGCGTGTGTTCGGAGCCGAG
AGGAACAGCAACACGGCAGGAGGCATGGTCACATCGCTCGCTGCCGCTGC
CGTAACCACCAAAAACGCCAGATCACCTGACGGAGCAGCCGCCGGAGCAC
AGCAGGCGGCCAGTCATAGCGATGACCCGATTGCGGCGCTTGCCGCCATC
GTCTACTCGCCCCCGTGCACACTCGAGCAGCTCATTGGCCGGCTGCAGGC
GTCACAGGTGCAGGAGCAGCCCGCCGTCGCTGTCGCGGCGCTGGCGGCGC
GGCTGTGCCAGCTGCGGCCGGTTCTCGGCCGCCGTGGCGCTGCCGCACTC
GCCGCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14869:4..1509+

>mRNA_P-wetherbeei_contig14869.1.1 ID=mRNA_P-wetherbeei_contig14869.1.1|Name=mRNA_P-wetherbeei_contig14869.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1257bp|location=Sequence derived from alignment at P-wetherbeei_contig14869:4..1509+ (Phaeothamnion wetherbeei SAG_119_79)
TACGGTCGCGGTGGCACTTACGAGCGGAAGAGGGCCGACGGTCCTGCTGC
CCGCACAGGTACCTTTACGACCGCCGCTGTGGCCGCCGCCACCAACGCTG
CAGCTGCCGCCGGCGCCGCTGCCACCGACCGCAGCACTCACCGCCGCCGG
CCAGCGAGCGCCGATACGCACGTCGTGGCGTCGGAGGCGCTGCGCCGCGC
CGGCGGCGGTAACAGAAACAATAACAACAACAACGCCGGCAACAGCGGCG
CGCACGGCGCATGGGGAGTGGCGGGGGCAGCGACGCTGGTGCGGCTGCGG
GAAAGAATTAAAGAACGGCTGGGGCGTGACGGCGTCGAGACGGCAGCACG
TGCGCTGCGGGGCCTGATGGACGGCGACCGCAACAGCCGCGTCGATCGCT
CCGAGCTGCGCTACGGCCTCCGCGAAGTGGGCGTGAACGTGTCATCTTCC
GAGCTGGAAGCGCTCTTCGCTCACTTCGACGCCGACCGCAATGGCTGCCT
CTCATACGAGGAGCTTCTGAACGGACTGCGGGGCGAAGACCAGCGCAGAT
CCATCGGCAGTGGCGGAGGTAGAAGGCACGCATGGGGTGACGAGGCGGCA
TCGCCAGCCCGACGCTCCCGCCAGGACTACGCCGGCGGGGGCGAAGGCAT
CGGCGCCGAGGGCAGCATAATCGACGAGAGGCGGCTGCAAAGAGAAGCGC
AGCGGCAGTACTGCCGCGCCCGCAGCAGCGAAGAGCAGCGGCGGCACGGC
GGCCAGGGCGTGCAGAGCGCCGGCTCCTTTTTTGAAGAAGGCGACGGCGG
TGGCTTCGCCATTGGTGGCGGTGGTCGTGGCAGCGGCGGTCACCGTGATG
GCAACGGCTACGGCGGCAGCGATCATCACAGTAGCGGCGGAGATGGCAGC
GGCAGCAACTGTCGGAACGATCACGATGGCAAGCGTGTGTTCGGAGCCGA
GAGGAACAGCAACACGGCAGGAGGCATGGTCACATCGCTCGCTGCCGCTG
CCGTAACCACCAAAAACGCCAGATCACCTGACGGAGCAGCCGCCGGAGCA
CAGCAGGCGGCCAGTCATAGCGATGACCCGATTGCGGCGCTTGCCGCCAT
CGTCTACTCGCCCCCGTGCACACTCGAGCAGCTCATTGGCCGGCTGCAGG
CGTCACAGGTGCAGGAGCAGCCCGCCGTCGCTGTCGCGGCGCTGGCGGCG
CGGCTGTGCCAGCTGCGGCCGGTTCTCGGCCGCCGTGGCGCTGCCGCACT
CGCCGCC
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