mRNA_P-wetherbeei_contig14842.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14842.2.1 vs. uniprot
Match: A0A835YUS0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUS0_9STRA) HSP 1 Score: 107 bits (266), Expect = 9.380e-22 Identity = 76/170 (44.71%), Postives = 97/170 (57.06%), Query Frame = 2
Query: 503 GVLQGLQSMDATVRESSCAAIAGVLGSVSYGR--GDSRR---DANWGAVAQLVSAGVVKKLLHRLVDRAPAVRVHAAGALANMAAIGDPKLCERMVKEDALTPVLRFLDEAASASEGARSDASLLPADAAATAAAPPREQSRFLLQLAAVLTGLLEASDAAVTRFTRTGG 997
G+L L+S+D VRESSC AIA V + Y + G S+R ANWGA QL+ G+VK+LL RLVD P VRVHAAGAL N++A+G+P LCE MV + +T L L EG + S + A+ A A LQL +L+ + E DAAV FT GG
Sbjct: 33 GLLDNLKSLDPFVRESSCVAIASVFAHLDYQQTAGGSKRPANSANWGAARQLLQRGLVKRLLQRLVDPVPGVRVHAAGALRNISAVGEPALCEAMVGDGVVTTALTQL-------EGVLREGSPVAAEHAQAIA----------LQLLLLLSNIFEHVDAAVDSFTDGGG 185
BLAST of mRNA_P-wetherbeei_contig14842.2.1 vs. uniprot
Match: D7FH07_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH07_ECTSI) HSP 1 Score: 100 bits (250), Expect = 1.200e-19 Identity = 71/190 (37.37%), Postives = 96/190 (50.53%), Query Frame = 2
Query: 500 GGVLQGLQSMDATVRESSCAAIAGVLGSVSYGRGDSRRDANWGAVAQLVSAGVVKKLLHRLVDRAPAVRVHAAGALANMAAIGDPKLCERMVKEDALTPVLRFLDEAASASEGARSDASLLPADAAATAAAPPREQSRF------------------LLQLAAVLTGLLEASDAAVTRFTRTGGLPTLLR 1015
GGVL GL S++A RESSCAAIA + V G +W A +L++ G+VKKLL R+VDR P V++ A GA+ N++A+ DP++CE +V +D LTPVL LD ++A+ + QL A L LL A D AV RFTR GGL ++R
Sbjct: 6 GGVLDGLTSLNALTRESSCAAIASLFEKVD---GPEAGGESWAAAQRLIAGGLVKKLLPRMVDRVPGVKLQAIGAMRNISAVRDPRMCEVLVHDDCLTPVLTLLDRMSTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVVAQLVATLCNLLAAVDVAVGRFTRQGGLQVVMR 192
BLAST of mRNA_P-wetherbeei_contig14842.2.1 vs. uniprot
Match: A0A662WHW5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WHW5_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 2.930e-12 Identity = 67/219 (30.59%), Postives = 111/219 (50.68%), Query Frame = 2
Query: 383 MGKVKRNKKHGFAARATPL--PKSGEGDDDAPSSLSATTSGGGVL-QGLQSMDATVRESSCAAIAGVLGSVSYGRGDSRRDANWGAVAQLVSAGVVKKLLHRLVDRAPAVRVHAAGALANMAAIGDPKLCERMVKEDALTPVLRFLDEAASASEGARSDASLLPADAAATAAAPPREQSRFLLQLAAVLTGLLEASDAAVTRFTRTGGLPTLLRAAASA 1030
MGK K+ + RA P P E ++ S+ + L +GL + ++RE++C A+A + G + R A + ++V AG+++KL+ R+VD P VR+HA GAL NM+ G +LCE M ++ +TP+++ + E+A+ DA+ A + + R L Q A+L L E+ AA+ T+ LP +L+ AA A
Sbjct: 1 MGKAKKLRSISHKKRAPPTGGPTPAELEEAQAQDFSSMPADEAQLFRGLLDLQGSIREATCVALATMFGDAESEEAEVRSRAK---LQRMVDAGLLRKLVPRVVDPLPMVRLHALGALRNMSVTGGLELCEVMTTQNVITPLVKVISESAT-------DATF--------AGSGDLQAVRVLEQAVALLGNLCESCQAAINELTQGQLLPPILKIAAQA 201
BLAST of mRNA_P-wetherbeei_contig14842.2.1 vs. uniprot
Match: W2Q4E3_PHYPN (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2Q4E3_PHYPN) HSP 1 Score: 77.8 bits (190), Expect = 5.240e-12 Identity = 72/221 (32.58%), Postives = 109/221 (49.32%), Query Frame = 2
Query: 383 MGKVKRNKKHGFAARATPL--PKSGEGDDDAPSSLSATTSGGGVL-QGLQSMDATVRESSCAAIAGVLGSVSYGRGD--SRRDANWGAVAQLVSAGVVKKLLHRLVDRAPAVRVHAAGALANMAAIGDPKLCERMVKEDALTPVLRFLDEAASASEGARSDASLLPADAAATAAAPPREQSRFLLQLAAVLTGLLEASDAAVTRFTRTGGLPTLLRAAASA 1030
MGK K+ + RA P P + E ++ LS + L +GL + VRE++C AIA + G V + SRR + ++V AG++KKL+ R+VD P VR HA GAL NM+ G +LCE M ++ +TP+++ + E A+ DAA + R + L Q A+L L E+ AA+ T+ LP + + AA A
Sbjct: 1 MGKAKKLRSISHKKRAPPTGGPSTAELEELQAMDLSTMAADEAQLFKGLVDLQGAVREATCVAIATMFGDVESDEAEATSRRK-----LQRMVDAGLLKKLIPRVVDPLPMVRQHALGALRNMSVTGGLELCELMTTQNVVTPLVKVITENAT--------------DAALNGSGDLRAV-QLLEQAVALLGNLCESCQAAINELTQGDLLPPIFKIAAQA 201
BLAST of mRNA_P-wetherbeei_contig14842.2.1 vs. uniprot
Match: A0A2P4YLK3_9STRA (ARM repeat-containing protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YLK3_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 2.730e-11 Identity = 55/173 (31.79%), Postives = 89/173 (51.45%), Query Frame = 2
Query: 506 VLQGLQSMDATVRESSCAAIAGVLGSVSYGRGDSRRDANWGAVAQLVSAGVVKKLLHRLVDRAPAVRVHAAGALANMAAIGDPKLCERMVKEDALTPVLRFLDEAASASEGARSDASLLPADAAATAAAPPREQSRFLLQLAAVLTGLLEASDAAVTRFTRTGGLPTLLRAAA 1024
+ +GL + VRE++C AIA + G ++R + ++V AG++KKL+ R+VD P VR HA GAL NM+ G +LCE M ++ +TP+++ + E A+ D A + R + L Q A+L+ L E+ AA+ T+ LP + + AA
Sbjct: 45 LFKGLVDLQGAVREATCVAIATMFGDAESDEAEARSRRK---LQRMVDAGLLKKLIPRVVDPLPMVRQHALGALRNMSVTGGLELCELMTTQNVVTPLVKVITENAT--------------DTALNGSGDLRAV-QLLEQAVALLSNLCESCQAAINELTQGELLPPIFKVAA 199
BLAST of mRNA_P-wetherbeei_contig14842.2.1 vs. uniprot
Match: A0A3F2REG6_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2REG6_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 1.290e-10 Identity = 52/175 (29.71%), Postives = 92/175 (52.57%), Query Frame = 2
Query: 506 VLQGLQSMDATVRESSCAAIAGVLGSVSYGRGDSRRDANWGAVAQLVSAGVVKKLLHRLVDRAPAVRVHAAGALANMAAIGDPKLCERMVKEDALTPVLRFLDEAASASEGARSDASLLPADAAATAAAPPREQSRFLLQLAAVLTGLLEASDAAVTRFTRTGGLPTLLRAAASA 1030
+ +GL + ++RE++C A+A + G V +++ + ++V AG++ KL+ R+VD P VR+HA GAL NM+ G +LCE M ++ +TP+++ + E A+ D A + + R + L Q A+L+ L E+ AA+ T+ LP + + A A
Sbjct: 45 LFKGLVDLQGSIREATCVALASMFGDVESDEAEAKSRKK---LQRMVDAGLLNKLIPRVVDPLPMVRLHALGALRNMSVTGGLELCELMTNQNVVTPLVKIITENAT--------------DEALSGSGDVRGV-QLLEQALALLSNLCESCQAAINELTQGQLLPPIFKIAGQA 201
BLAST of mRNA_P-wetherbeei_contig14842.2.1 vs. uniprot
Match: A0A484EH95_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EH95_BRELC) HSP 1 Score: 73.2 bits (178), Expect = 1.720e-10 Identity = 72/221 (32.58%), Postives = 111/221 (50.23%), Query Frame = 2
Query: 383 MGKVKRNKKHGFAARATPL--PKSGEGDDDAPSSLSATTSGGGVL-QGLQSMDATVRESSCAAIAGVLGSVSYGRGD--SRRDANWGAVAQLVSAGVVKKLLHRLVDRAPAVRVHAAGALANMAAIGDPKLCERMVKEDALTPVLRFLDEAASASEGARSDASLLPADAAATAAAPPREQSRFLLQLAAVLTGLLEASDAAVTRFTRTGGLPTLLRAAASA 1030
MGK K+ + RATP P + E +D LSA L +GL + VRE++C AIA + G V + + SRR + ++V AG++KKL+ R+VD P VR A GAL N++ G +LCE M ++ +TP++R + E ++++ A S L A + L Q A+L+ L E+ AA+ T+ L + + AA A
Sbjct: 1 MGKTKKLRSISHKKRATPAGGPTAAEIEDMKTMDLSAVAVDEAQLFKGLVDLQGAVREATCVAIATMFGDVEDEKAEENSRRK-----LQRMVDAGLLKKLIPRVVDPLPMVRQFALGALRNISVTGGLELCELMTMQNVVTPLIRVITE--NSTDVALSSNDNLRA-------------VQLLEQAVALLSNLCESCQAAINELTQGELLLPIFKIAAQA 201
BLAST of mRNA_P-wetherbeei_contig14842.2.1 vs. uniprot
Match: A0A5D6XI57_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XI57_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 3.850e-10 Identity = 51/177 (28.81%), Postives = 93/177 (52.54%), Query Frame = 2
Query: 506 VLQGLQSMDATVRESSCAAIAGVLGSVSYGRGDSRRDANWGAVAQLVSAGVVKKLLHRLVDRAPAVRVHAAGALANMAAIGDPKLCERMVKEDALTPVLRFLDEAASASEGARSDASLLPADAAATAAAPPREQSRFLLQLAAVLTGLLEASDAAVTRFTRTGGLPTLLRAAASAVA 1036
+ GL ++ ++RE++C AIA + G ++ + R G ++V AG++KKL+ R+VD VR++A GAL NM+ G ++CE M ++ +TP+++ + E+A + ++D L+ + L Q A+L+ L E+ AA+ T+ L ++ AA A
Sbjct: 44 LFHGLTNLQGSIREATCVAIATMFGDIADEEQERRMREKLG---KMVDAGLLKKLIPRMVDPLKMVRLYAVGALRNMSVTGGLEICEVMTTQNVITPLVKIISESAQSETFEKNDLHLV----------------QVLEQAVALLSNLCESCQAAINELTQGQLLEPIMLIAAKGTA 201
BLAST of mRNA_P-wetherbeei_contig14842.2.1 vs. uniprot
Match: A0A8C4BJB0_9TELE (HEAT repeat containing 3 n=5 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4BJB0_9TELE) HSP 1 Score: 72.0 bits (175), Expect = 4.280e-10 Identity = 74/237 (31.22%), Postives = 112/237 (47.26%), Query Frame = 2
Query: 338 ASQDSPKSVREIQLAMGKVKRNK-------KHGFAARATPLPKSGEGDDDAPSSLSATTSGGGVLQGLQSMDATVRESSCAAIAGVLGSVSYGRGDSRRDANWGAVAQLVSAGVVKKLLHRLVDRAPAVRVHAAGALANMAAIGDPKLCERMVKEDALTPVLRFLDEAASASEGARSDASLLPADAAATAAAPPREQSRFLLQLAA-----VLTGLLEASDAAVTRFTRTGGLPTLL 1012
A+ + + VR++ MGK K +K G AA A P GDD+ + +L+ LQS A VRE +CA I+ V+ +RDA V++L L+D + AVR AAGAL N++A G P++CE MV++D LTP++ L E SA E ++AP ++ + ++ A +L L E+S AV+ F R+G L L+
Sbjct: 4 AAAEGRRVVRQLGTIMGKTKSSKFKRPRVSADGLAAGAVKRPS---GDDEEAVETDEDSPAAELLEKLQSPCADVRELACAGISRVVQQSQTIPAFLQRDA-------------VRRLGPLLLDPSRAVRETAAGALRNLSACGGPEVCEDMVRQDILTPLVTLLRECCSAFE---------------VSSAPSSQEPKHTVEGVANEAVNLLWNLCESSTRAVSTFNRSGLLDVLI 209
BLAST of mRNA_P-wetherbeei_contig14842.2.1 vs. uniprot
Match: H3H3F4_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H3F4_PHYRM) HSP 1 Score: 71.6 bits (174), Expect = 6.900e-10 Identity = 67/219 (30.59%), Postives = 104/219 (47.49%), Query Frame = 2
Query: 383 MGKVKRNKKHGFAARATPL--PKSGEGDDDAPSSLSATTSGGGVL-QGLQSMDATVRESSCAAIAGVLGSVSYGRGDSRRDANWGAVAQLVSAGVVKKLLHRLVDRAPAVRVHAAGALANMAAIGDPKLCERMVKEDALTPVLRFLDEAASASEGARSDASLLPADAAATAAAPPREQSRFLLQLAAVLTGLLEASDAAVTRFTRTGGLPTLLRAAASA 1030
MGK K+ + RA P P + E ++ S + L +GL + VRE++C AIA + G D A+ + ++V AG++KKL+ R+VD P VR HA GAL NM+ G +LCE M ++ +TP+++ + + A+ D A R + L Q A+L L E+ AA+ T+ LP + + AA A
Sbjct: 1 MGKAKKLRSISHKKRAPPTGGPSTAELEELQAMDFSVMAADEAQLFKGLVDLQGAVREATCVAIATMFGDAES---DEAEAASRRKLQRMVDAGLLKKLIPRVVDPLPMVRQHALGALRNMSVTGGLELCEVMTAQNVVTPLVKVITDNAT--------------DKALNGGGDLRAV-QLLEQAVALLGNLCESCQAAINELTQGELLPPIFKIAAQA 201 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14842.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14842.2.1 >prot_P-wetherbeei_contig14842.2.1 ID=prot_P-wetherbeei_contig14842.2.1|Name=mRNA_P-wetherbeei_contig14842.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=222bp MGKVKRNKKHGFAARATPLPKSGEGDDDAPSSLSATTSGGGVLQGLQSMDback to top mRNA from alignment at P-wetherbeei_contig14842:622..1669+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14842.2.1 ID=mRNA_P-wetherbeei_contig14842.2.1|Name=mRNA_P-wetherbeei_contig14842.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1048bp|location=Sequence derived from alignment at P-wetherbeei_contig14842:622..1669+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14842:622..1669+ >mRNA_P-wetherbeei_contig14842.2.1 ID=mRNA_P-wetherbeei_contig14842.2.1|Name=mRNA_P-wetherbeei_contig14842.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=666bp|location=Sequence derived from alignment at P-wetherbeei_contig14842:622..1669+ (Phaeothamnion wetherbeei SAG_119_79)back to top |