mRNA_P-wetherbeei_contig14819.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14819.1.1
Unique NamemRNA_P-wetherbeei_contig14819.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14819.1.1 vs. uniprot
Match: A0A835YKZ1_9STRA (cGMP-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKZ1_9STRA)

HSP 1 Score: 150 bits (379), Expect = 3.790e-38
Identity = 69/136 (50.74%), Postives = 87/136 (63.97%), Query Frame = 1
Query:    7 ALGILIFEFLAGHSPFQAPGQPSDMTSLFTRIACSKKDGVNFPRDFDRRARGPDARHLVQQLLECNPCERLGNLAEGPDAIRKHPHFDGIDFNKLRRTEVPPPWRPVRKV-PLPARTDDHEHVPEYTGSGETFADW 411
            A G+L+FEF AGH+PFQAP +P DMT+LFTRIAC K+DGV FP DFDR+ +G   R LV +LL  +  +RLG L  G D +R H HF G+D+  L       PW P R++  L A  D H+ VP + G    FADW
Sbjct:  802 AFGVLVFEFTAGHTPFQAPQEPRDMTNLFTRIACCKRDGVRFPPDFDRKTKGRPTRDLVSRLLTADASQRLGALTAGADGVRAHAHFAGVDWAALTAKRAAAPWAPPRELGKLGADDDAHKDVPVFAGDQAAFADW 937          
BLAST of mRNA_P-wetherbeei_contig14819.1.1 vs. uniprot
Match: A0A835YKT1_9STRA (cGMP-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKT1_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.580e-34
Identity = 66/136 (48.53%), Postives = 90/136 (66.18%), Query Frame = 1
Query:    7 ALGILIFEFLAGHSPFQAPGQPSDMTSLFTRIACSKKDGVNFPRDFDRRARGPDARHLVQQLLECNPCERLGNLAEGPDAIRKHPHFDGIDFNKLRRTEVPPPWRPVRKVPLPARTDD--HEHVPEYTGSGETFAD 408
            A G+L++EF AGH+PFQ P +P DMT+LFTRIA  K++GV FP+DFDR+ +G   R LV +LL+    +R+GNL  G DA+R H HF G+D+ +L       PW P RKV    + D+  H+ VP +TG+   FAD
Sbjct:  733 AYGVLVYEFTAGHTPFQWPSEPMDMTALFTRIANCKREGVRFPKDFDRKTKGRPTRDLVSRLLQWEAPQRIGNLQAGADAVRAHAHFTGVDWAELLSKAARAPWVPTRKVGKD-KVDEGVHKDVPAFTGNQALFAD 867          
BLAST of mRNA_P-wetherbeei_contig14819.1.1 vs. uniprot
Match: A0A7S2Y020_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y020_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.680e-34
Identity = 63/136 (46.32%), Postives = 86/136 (63.24%), Query Frame = 1
Query:    7 ALGILIFEFLAGHSPFQAPGQPSDMTSLFTRIACSKKDGVNFPRDFDRRARGPDARHLVQQLLECNPCERLGNLAEGPDAIRKHPHFDGIDFNKLRRTEVPPPW-RPVRKVPLPARTDDHEHVPEYTGSGETFADW 411
            A GIL FE +AGH+PF  P   +DMT+LFT IAC K+DG+ FP+DFDR+A+G  AR LV +LL   P +RLGNL+   D I++H +F GID++ L + ++P PW  P   +      D    V  YTG  E F ++
Sbjct:  154 AFGILAFELIAGHTPFAPPDAQADMTNLFTAIACVKRDGIQFPKDFDRKAKGTVARDLVVKLLHPEPSQRLGNLSGRTDDIKQHEYFQGIDWSDLTKKQIPGPWIPPPNGMDADPNQDPGTDVARYTGDQEKFREF 289          
BLAST of mRNA_P-wetherbeei_contig14819.1.1 vs. uniprot
Match: D8LKW3_ECTSI (cGMP-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW3_ECTSI)

HSP 1 Score: 134 bits (336), Expect = 2.140e-32
Identity = 63/138 (45.65%), Postives = 91/138 (65.94%), Query Frame = 1
Query:    7 ALGILIFEFLAGHSPFQAPGQPSDMTSLFTRIACSKKDGVN--FPRDFDRRARGPDARHLVQQLLECNPCERLGNLAEGPDAIRKHPHFDGIDFNKLRRTEVPPPWRPVRKVPLPARTD-DHEHVPEYTGSGETFADW 411
            ALG+L FE+ AG++PFQ+PG+P+D+T+LFTRIA SK       FP ++D +A    +R +V + L+ +P +RLGNLA G D  RKHP+F  ID+N L    +P PW+P   +  PA  + +H+ VP +TG    FA+W
Sbjct:  721 ALGVLTFEYTAGYTPFQSPGEPTDITALFTRIAGSKVATSKSVFPPNYDTKAGNEHSRDIVSRFLQADPSQRLGNLAGGIDEARKHPYFAEIDWNALAHKRMPAPWKPPHSLAPPAVDEGNHKDVPVFTGDNSIFANW 858          
BLAST of mRNA_P-wetherbeei_contig14819.1.1 vs. uniprot
Match: A0A7S2UYY2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYY2_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.170e-30
Identity = 63/137 (45.99%), Postives = 84/137 (61.31%), Query Frame = 1
Query:    7 ALGILIFEFLAGHSPFQAPGQPSDMTSLFTRIACSKKDGVNFPRDFDRRARGPDARHLVQQLLECNPCERLGNLAEGPDAIRKHPHFDG-IDFNKLRRTEVPPPWRPV-RKVPLPARTDDHEHVPEYTGSGETFADW 411
            A G+L FE +AGH+PF  P   S+MT LFT IACSK+ G+ FP DFDR+ARG D R LV +LL+  P  RLGNLA   D I+ HP F G ID+  L   ++  PW P  RK   P   D  + +  + G+ + F+++
Sbjct:  261 AFGVLTFELVAGHTPFVPPEGYSNMTELFTAIACSKRQGIPFPDDFDRKARGKDCRDLVIKLLQSEPSHRLGNLAGRTDDIKDHPFFKGYIDYAALYERQITAPWVPAPRKFDSPGANDGSQEMLIFFGNQDQFSEF 397          
BLAST of mRNA_P-wetherbeei_contig14819.1.1 vs. uniprot
Match: A0A7S3XWZ7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWZ7_HETAK)

HSP 1 Score: 118 bits (296), Expect = 1.680e-28
Identity = 57/137 (41.61%), Postives = 81/137 (59.12%), Query Frame = 1
Query:    1 LRALGILIFEFLAGHSPFQAPGQPSDMTSLFTRIACSKKDGVNFPRDFDRRARGPDARHLVQQLLECNPCERLGNLAEGPDAIRKHPHFDGIDFNKLRRTEVPPPWRPVRKVPLPARTDDHEHVPEYTGSGETFADW 411
            L ALG+L++E + GH+PF  PG+  DMT LFT+IA SK+ G+ F  +FDR+A     R LV++L+   P +RLGNLA     ++ HPHF G  + +L R EV  PW+P    P   R +  +    + G    FAD+
Sbjct:  182 LWALGVLVYELVVGHTPFVKPGKEPDMTELFTKIALSKRQGIAFSANFDRKANCAATRDLVKKLMHHEPQKRLGNLARRMGDVKAHPHFQGTRWQELVRMEVESPWKPPES-PTKTRKEKRDPSLVFKGDQSIFADF 317          
BLAST of mRNA_P-wetherbeei_contig14819.1.1 vs. uniprot
Match: A0A835YLH2_9STRA (cGMP-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLH2_9STRA)

HSP 1 Score: 120 bits (302), Expect = 7.940e-28
Identity = 61/142 (42.96%), Postives = 81/142 (57.04%), Query Frame = 1
Query:    7 ALGILIFEFLAGHSPFQAPGQPSDMTSLFTRIACSKKDGVNFPRDFDRRARGPDARHLVQQLLECNPCERLGNLAEGPDAIRKHPHFDGIDFNKLRRTEVPPPWRP--------VRKVPLPARTDDHEHVPEYTGSGETFAD 408
            A G+L+FE  AGH+PFQ P  P+DMTSLF+RIA   +DGVNFP+DF  + +G     LV QLL+    +RLG L  G DA+R H HF G+D+  L R +   PW P        +  + L  + +    V  YTG  + F D
Sbjct:  924 AFGVLVFELTAGHTPFQGPKDPNDMTSLFSRIAFCWRDGVNFPQDFVAKTKGRPTADLVTQLLQQEAKQRLGYLKTGADAMRAHGHFAGVDWPALLRKQTQAPWVPPPPRRKFNMANLKLTLKWNSSASVVPYTGRQDVFED 1065          
BLAST of mRNA_P-wetherbeei_contig14819.1.1 vs. uniprot
Match: A0A7S1U765_9STRA (cGMP-dependent protein kinase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U765_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 2.090e-16
Identity = 50/137 (36.50%), Postives = 66/137 (48.18%), Query Frame = 1
Query:    1 LRALGILIFEFLAGHSPFQAPGQPSDMTSLFTRIACSKKDGVNFPRDFDRRARGPDARHLVQQLLECNPCERLGNLAEGPDAIRKHPHFDGIDFNKLRRTEVPPPWRPVRKVPLPARTDDHEHVPEYTGSGETFADW 411
            L A+G +IFE +AGH+PFQ     +D + +FT I   K   +NFP  F   +     R L+ +LL     +R+GN A     I +H  FDG  F  LR   +  PW P   VP P   D    VP Y G    F D+
Sbjct:  629 LWAIGCIIFEIIAGHTPFQNVDGTNDYSDIFTGILSLKNGPLNFPASFQSESFA-GLRRLISELLVFESHQRIGNRAGHYQDIFEHSAFDGFSFPTLREKAMDAPWLPTTFVPKPMPADA---VPAYDGDQALFEDF 761          
BLAST of mRNA_P-wetherbeei_contig14819.1.1 vs. uniprot
Match: A0A7S4IJ98_9STRA (cGMP-dependent protein kinase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IJ98_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 2.260e-15
Identity = 49/132 (37.12%), Postives = 71/132 (53.79%), Query Frame = 1
Query:    7 ALGILIFEFLAGHSPFQAPGQPSDMTSLFTRIACSKKDGVNFPR-DFDRRARGPDARHLVQQLLECNPCERLGNLAEGPDAIRKHPHFDGIDFNKLRRTEVPPPWRPVRKVPLPART-DDHEHVPEYTGSGE 396
            + G+L++E + G +PF   G   D  +LF RI   K     FPR DF       DA+ L+  +L  +P ERLG+ A     I++HP F G++F KLRR E+ PPW+P    PL     DD +H+ +    G+
Sbjct:  482 SFGVLLYEMICGITPFYDKG--IDQMTLFKRIVNQK---YRFPRGDFIT----DDAKSLIGHILVADPVERLGSFARAEKDIQEHPWFQGVNFEKLRRRELTPPWKPDITDPLDVSNFDDWDHLKDKKREGK 604          
BLAST of mRNA_P-wetherbeei_contig14819.1.1 vs. uniprot
Match: A0A6G0WX41_9STRA (cGMP-dependent protein kinase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WX41_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 7.010e-14
Identity = 44/108 (40.74%), Postives = 60/108 (55.56%), Query Frame = 1
Query:    7 ALGILIFEFLAGHSPFQAPGQPSDMTSLFTRIACSKKDG--VNFPRDFDRRARGPDARHLVQQLLECNPCERLGNLAEGPDAIRKHPHFDGIDFNKLRRTEVPPPWRP 324
            A GIL++E L G++PF+ P    D+  LF  IA  +     V FP DF      PDA + ++ LL  +P  RLG    G   IR HP F  +D++KL R E+PPP+ P
Sbjct:  702 AFGILVYEMLLGYTPFETPD--GDIAKLFKNIAFVRTGANCVQFPHDFTINL--PDACNFIECLLNGDPTRRLGMGRHGSQEIRNHPWFHDMDWDKLLREELPPPYVP 805          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14819.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YKZ1_9STRA3.790e-3850.74cGMP-dependent protein kinase n=1 Tax=Tribonema mi... [more]
A0A835YKT1_9STRA1.580e-3448.53cGMP-dependent protein kinase n=1 Tax=Tribonema mi... [more]
A0A7S2Y020_9STRA1.680e-3446.32Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D8LKW3_ECTSI2.140e-3245.65cGMP-dependent protein kinase n=1 Tax=Ectocarpus s... [more]
A0A7S2UYY2_9STRA1.170e-3045.99Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XWZ7_HETAK1.680e-2841.61Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835YLH2_9STRA7.940e-2842.96cGMP-dependent protein kinase n=1 Tax=Tribonema mi... [more]
A0A7S1U765_9STRA2.090e-1636.50cGMP-dependent protein kinase n=1 Tax=Phaeomonas p... [more]
A0A7S4IJ98_9STRA2.260e-1537.12cGMP-dependent protein kinase n=1 Tax=Odontella au... [more]
A0A6G0WX41_9STRA7.010e-1440.74cGMP-dependent protein kinase n=1 Tax=Aphanomyces ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14819contigP-wetherbeei_contig14819:342..1318 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LKW3
PFAMsPkinase,cNMP_binding
Model size666
Max annot lvl2759|Eukaryota
KEGG koko:K07376
KEGG Pathwayko04022,ko04270,ko04540,ko04611,ko04713,ko04714,ko04730,ko04740,ko04923,ko04970,map04022,map04270,map04540,map04611,map04713,map04714,map04730,map04740,map04923,map04970
KEGG ModuleM00694
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.56e-21
EggNOG OGsCOG0664@1|root,KOG0616@1|root,KOG0614@2759|Eukaryota,KOG0616@2759|Eukaryota
Ec32 ortholog descriptionRmlC-like jelly roll fold
Ec32 orthologEc-10_000100.2
EC2.7.11.12
DescriptioncAMP-dependent protein kinase activity
Cds size336
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000,ko01001
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186034.4281073-UTR-P-wetherbeei_contig14819:341..4191683186034.4281073-UTR-P-wetherbeei_contig14819:341..419Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig14819 342..419 +
1683186034.457517-UTR-P-wetherbeei_contig14819:1066..13181683186034.457517-UTR-P-wetherbeei_contig14819:1066..1318Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig14819 1067..1318 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186034.4389675-CDS-P-wetherbeei_contig14819:419..5761683186034.4389675-CDS-P-wetherbeei_contig14819:419..576Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14819 420..576 +
1683186034.4481912-CDS-P-wetherbeei_contig14819:887..10661683186034.4481912-CDS-P-wetherbeei_contig14819:887..1066Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14819 888..1066 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14819.1.1prot_P-wetherbeei_contig14819.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14819 420..1066 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14819.1.1

>prot_P-wetherbeei_contig14819.1.1 ID=prot_P-wetherbeei_contig14819.1.1|Name=mRNA_P-wetherbeei_contig14819.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=112bp
MTSLFTRIACSKKDGVNFPRDFDRRARGPDARHLVQQLLECNPCERLGNL
AEGPDAIRKHPHFDGIDFNKLRRTEVPPPWRPVRKVPLPARTDDHEHVPE
YTGSGETFADW*
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mRNA from alignment at P-wetherbeei_contig14819:342..1318+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14819.1.1 ID=mRNA_P-wetherbeei_contig14819.1.1|Name=mRNA_P-wetherbeei_contig14819.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=977bp|location=Sequence derived from alignment at P-wetherbeei_contig14819:342..1318+ (Phaeothamnion wetherbeei SAG_119_79)
CTCAGGGCGCTGGGCATCCTGATTTTTGAGTTCCTCGCGGGCCACTCGCC CTTCCAGGCACCCGGGCAGCCCAGCGACATGACGTCGCTCTTCACGCGCA TCGCCTGCAGCAAGAAGGACGGAGTCAATTTCCCGCGAGACTTCGATCGA CGCGCACGCGGGCCTGATGCGCGACACCTAGTGCAGCAGCTGCTGGAGTG TAACCCCTGCGAGCGCCTCGGAAACCTCGCCGAAGGTGCGGTAGTGTGTT TACAAGAGATTCTAAAAGATGGTACGGCGGTTGCGGTGCGGATCGGTCGA TTACAGCGGTGGGCGATGGTGGCAATGGTGACAGGGGCGGCGCGTCGTGG CGGCGGCAGGAGGCGGTGTGACCTCTACATTTCTAGTGCAGCTTTTCGGG CCTTCTTTCATCCTGCATACTCGAAGCAGGAAAAGGTAAGAGCAAAGCAA ACCCGAGTAACTATCCCAAGAATTTTTCGCGAACCAAGCTATAGGCAAGC TTTTCTTAACTCCGCCTGCCCGCCATTTCTCGCTTCGTGTCGGCAGGTCC CGATGCCATCCGCAAGCACCCACACTTTGACGGCATCGACTTCAACAAGC TGCGGCGGACGGAGGTGCCACCGCCGTGGCGTCCGGTCCGCAAGGTGCCG CTGCCGGCGCGTACCGACGACCACGAGCATGTGCCCGAATACACGGGCAG CGGCGAGACATTTGCCGACTGGTAATGAATAGCAGAGGCGGCAGAACCGG CACCGGAGGCGACGCCGAGCAGGCTTAGTCGGCTGATGCTGCTGCGTTGG GGGCGACAGCAGCGGCGCCAATCAGGGCGGCACCGGCGAGAGGCGGCGGC GGTTGTTGCTGCAGCCACTCATCAATGGGGATGCTGAACCAGGTTGAGGT AGTTAAGCCCCTTGAGAGGGGCGCAGTAGGCACTTTGGAGGCGGGGAAAG AGGAAGCCTATCGTACCGTCGGAGCGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14819:342..1318+

>mRNA_P-wetherbeei_contig14819.1.1 ID=mRNA_P-wetherbeei_contig14819.1.1|Name=mRNA_P-wetherbeei_contig14819.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=336bp|location=Sequence derived from alignment at P-wetherbeei_contig14819:342..1318+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACGTCGCTCTTCACGCGCATCGCCTGCAGCAAGAAGGACGGAGTCAA
TTTCCCGCGAGACTTCGATCGACGCGCACGCGGGCCTGATGCGCGACACC
TAGTGCAGCAGCTGCTGGAGTGTAACCCCTGCGAGCGCCTCGGAAACCTC
GCCGAAGGTCCCGATGCCATCCGCAAGCACCCACACTTTGACGGCATCGA
CTTCAACAAGCTGCGGCGGACGGAGGTGCCACCGCCGTGGCGTCCGGTCC
GCAAGGTGCCGCTGCCGGCGCGTACCGACGACCACGAGCATGTGCCCGAA
TACACGGGCAGCGGCGAGACATTTGCCGACTGGTAA
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