mRNA_P-wetherbeei_contig1480.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1480.4.1 vs. uniprot
Match: W7T145_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T145_9STRA) HSP 1 Score: 139 bits (351), Expect = 3.880e-35 Identity = 65/85 (76.47%), Postives = 75/85 (88.24%), Query Frame = 3
Query: 759 RHVILPKDMARSVPKSRLLSEDEWRGIGVQQSRGWQMYAIHRPEPHVMLFRRPLGTDPVTGKVDEELAREAKERYLQELEDRGAV 1013
RHVILPK++ARS+PK RLL+E EWRGIGVQQSRGWQ YAIHRPEPH++LFRRPLGTDPVTGKV+ EL REAKE+Y + + GAV
Sbjct: 19 RHVILPKEIARSLPKQRLLTESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVNAELEREAKEKYAESMN--GAV 101
BLAST of mRNA_P-wetherbeei_contig1480.4.1 vs. uniprot
Match: D7G7T5_ECTSI (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7T5_ECTSI) HSP 1 Score: 134 bits (338), Expect = 2.820e-33 Identity = 63/94 (67.02%), Postives = 78/94 (82.98%), Query Frame = 3
Query: 759 RHVILPKDMARSVPKSRLLSEDEWRGIGVQQSRGWQMYAIHRPEPHVMLFRRPLGTDPVTGKVDEELAREAKERYLQELEDRGAVNIDENGAPM 1040
RHVILPKD+A+ +PKSR+L+E EWRG+GVQQSRGW YAIHRPEPH++LF+RPLGTDPV+GKVD L +EAK+ Y QEL D+ ++ N APM
Sbjct: 19 RHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQELADK--MDPGTNVAPM 110
BLAST of mRNA_P-wetherbeei_contig1480.4.1 vs. uniprot
Match: A0A6H5L2I6_9PHAE (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2I6_9PHAE) HSP 1 Score: 134 bits (336), Expect = 3.840e-33 Identity = 59/81 (72.84%), Postives = 72/81 (88.89%), Query Frame = 3
Query: 759 RHVILPKDMARSVPKSRLLSEDEWRGIGVQQSRGWQMYAIHRPEPHVMLFRRPLGTDPVTGKVDEELAREAKERYLQELED 1001
RHVILPK+ A+ +P+SRLL+EDEWR +GVQQSRGWQ YA+H PEPH++LFRRPLGT+PVTG+VD EL REAKE+Y +EL D
Sbjct: 18 RHVILPKETAKILPQSRLLTEDEWRHLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSD 98
BLAST of mRNA_P-wetherbeei_contig1480.4.1 vs. uniprot
Match: A0A7S2BBH9_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BBH9_9STRA) HSP 1 Score: 134 bits (338), Expect = 4.790e-33 Identity = 60/80 (75.00%), Postives = 70/80 (87.50%), Query Frame = 3
Query: 759 RHVILPKDMARSVPKSRLLSEDEWRGIGVQQSRGWQMYAIHRPEPHVMLFRRPLGTDPVTGKVDEELAREAKERYLQELE 998
RHVILPK++A+++PK+RLLSE EWRGIGVQQSRGW YAIHRPEPH++LFRRPLGTDPVTGK+D L REAK+ Y LE
Sbjct: 37 RHVILPKELAKNLPKARLLSEQEWRGIGVQQSRGWAHYAIHRPEPHILLFRRPLGTDPVTGKIDPALEREAKDAYQNNLE 116
BLAST of mRNA_P-wetherbeei_contig1480.4.1 vs. uniprot
Match: A0A7S2BWV6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BWV6_9STRA) HSP 1 Score: 134 bits (337), Expect = 5.250e-33 Identity = 59/75 (78.67%), Postives = 69/75 (92.00%), Query Frame = 3
Query: 759 RHVILPKDMARSVPKSRLLSEDEWRGIGVQQSRGWQMYAIHRPEPHVMLFRRPLGTDPVTGKVDEELAREAKERY 983
RHVILPK++A+++PK+RLL E EWRGIGVQQSRGWQ YAIHRPEPH++LFRRPLGTDPVTGKVD EL R+AK+ Y
Sbjct: 38 RHVILPKELAKNLPKARLLGEQEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVDVELERDAKDAY 112
BLAST of mRNA_P-wetherbeei_contig1480.4.1 vs. uniprot
Match: A0A7S1UE56_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UE56_9STRA) HSP 1 Score: 133 bits (335), Expect = 1.460e-32 Identity = 57/79 (72.15%), Postives = 71/79 (89.87%), Query Frame = 3
Query: 759 RHVILPKDMARSVPKSRLLSEDEWRGIGVQQSRGWQMYAIHRPEPHVMLFRRPLGTDPVTGKVDEELAREAKERYLQEL 995
RHVILPK++A+S+PK+R+L+E EWR +GVQQSRGW+ YAIHRPEPH++LFRRPLGTDP TG+VD +L REAKE YL+ L
Sbjct: 52 RHVILPKELAKSIPKTRILAEQEWRNLGVQQSRGWEHYAIHRPEPHILLFRRPLGTDPTTGRVDADLQREAKESYLRTL 130
BLAST of mRNA_P-wetherbeei_contig1480.4.1 vs. uniprot
Match: A0A6S9ANL1_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9ANL1_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.930e-32 Identity = 58/75 (77.33%), Postives = 68/75 (90.67%), Query Frame = 3
Query: 759 RHVILPKDMARSVPKSRLLSEDEWRGIGVQQSRGWQMYAIHRPEPHVMLFRRPLGTDPVTGKVDEELAREAKERY 983
RHVILPKD+A+++PK+RLLSE EWRGIGVQQSRGW YAIHRPEPH++LFRRPLGTDP +G+VD EL REA+E Y
Sbjct: 21 RHVILPKDLAKTLPKNRLLSESEWRGIGVQQSRGWMHYAIHRPEPHILLFRRPLGTDPQSGQVDPELEREAREEY 95
BLAST of mRNA_P-wetherbeei_contig1480.4.1 vs. uniprot
Match: A0A7S3MEH0_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEH0_9STRA) HSP 1 Score: 130 bits (327), Expect = 6.690e-32 Identity = 58/79 (73.42%), Postives = 70/79 (88.61%), Query Frame = 3
Query: 759 RHVILPKDMARSVPKSRLLSEDEWRGIGVQQSRGWQMYAIHRPEPHVMLFRRPLGTDPVTGKVDEELAREAKERYLQEL 995
RHVILPKD AR++PK+R L+E EWR IGVQQSRGW+ YA H+PEPH++LFRRPLGTDPV+G+VD EL REA+E+Y QEL
Sbjct: 20 RHVILPKDSARNLPKNRTLTELEWRNIGVQQSRGWEHYACHKPEPHILLFRRPLGTDPVSGEVDPELEREAREKYQQEL 98
BLAST of mRNA_P-wetherbeei_contig1480.4.1 vs. uniprot
Match: A0A1E7F3Q6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F3Q6_9STRA) HSP 1 Score: 130 bits (326), Expect = 9.130e-32 Identity = 57/82 (69.51%), Postives = 72/82 (87.80%), Query Frame = 3
Query: 759 RHVILPKDMARSVPKSRLLSEDEWRGIGVQQSRGWQMYAIHRPEPHVMLFRRPLGTDPVTGKVDEELAREAKERYLQELEDR 1004
RHVILPK++A+++PKSRLLSE EWRGIGVQQSRGW YAIHRPEPH++LFRRPLGTDP +G+VD E+ R+A+E Y + ++R
Sbjct: 22 RHVILPKELAKTLPKSRLLSESEWRGIGVQQSRGWGHYAIHRPEPHILLFRRPLGTDPQSGRVDPEMERKAREEYRAQYDNR 103
BLAST of mRNA_P-wetherbeei_contig1480.4.1 vs. uniprot
Match: A0A7S0UH58_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UH58_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.590e-31 Identity = 56/75 (74.67%), Postives = 69/75 (92.00%), Query Frame = 3
Query: 759 RHVILPKDMARSVPKSRLLSEDEWRGIGVQQSRGWQMYAIHRPEPHVMLFRRPLGTDPVTGKVDEELAREAKERY 983
RHVILPK++A+++PKSRLLSE EWRGIGVQQSRGWQ YAIHRPEPH++LFRRPLGTDP +G+VD E+ R+A++ Y
Sbjct: 51 RHVILPKELAKTLPKSRLLSESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQSGRVDPEMERKARDEY 125 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1480.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1480.4.1 >prot_P-wetherbeei_contig1480.4.1 ID=prot_P-wetherbeei_contig1480.4.1|Name=mRNA_P-wetherbeei_contig1480.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=748bp MAERKGSTASVPHAAARAATVASRRASTGIPKPSLVLGSPPLSQGSARSAback to top mRNA from alignment at P-wetherbeei_contig1480:1348..6984+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1480.4.1 ID=mRNA_P-wetherbeei_contig1480.4.1|Name=mRNA_P-wetherbeei_contig1480.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=5637bp|location=Sequence derived from alignment at P-wetherbeei_contig1480:1348..6984+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1480:1348..6984+ >mRNA_P-wetherbeei_contig1480.4.1 ID=mRNA_P-wetherbeei_contig1480.4.1|Name=mRNA_P-wetherbeei_contig1480.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2244bp|location=Sequence derived from alignment at P-wetherbeei_contig1480:1348..6984+ (Phaeothamnion wetherbeei SAG_119_79)back to top |