mRNA_P-wetherbeei_contig148.9.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig148.9.1
Unique NamemRNA_P-wetherbeei_contig148.9.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig148.9.1 vs. uniprot
Match: A0A6H5K9K1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K1_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 1.090e-60
Identity = 105/204 (51.47%), Postives = 148/204 (72.55%), Query Frame = 1
Query:    1 SGISGPAALKLSAWAARELHDVGYRGKVNLNCLPGANAAAVLQRLERERRALARRAITAFCPL--QDAFFFSILPPGPAMSLQPPTDAGIPKRLWQALCDSAGIGREERWADASNAKLRAVAERICALELEVVSKGAFKEEFVTCGGVSLAEIDMRTMCSRVVPGLFFAGEVMDIDGVTGGYNLQSAWTTGFVAGCGVAAAAAA 606
            +G+SGPAALKLSA+ AR L++ GYRG++ +N + G N +  L  L+  R   A++ + AFCP+    A   S+   G   S QPP+ + +P+RLWQ+L  +AG+   ++WAD S AKL A+A+++ A E ++V KG+FKEEFVTCGGV+L+ +DMRTM S+ V GL FAGEV+D+DGVTGG+N QSAWTTG+VAG  + +AA+A
Sbjct:  278 TGVSGPAALKLSAFGARVLNESGYRGRLVVNWMAGNNPSKTLDDLQAFRTRNAKKTVYAFCPVVGSGALGSSVSSGGRPQSPQPPSISSLPRRLWQSLALAAGVAAGDKWADLSKAKLSALAQQLTACEFQIVGKGSFKEEFVTCGGVALSALDMRTMESKTVAGLHFAGEVVDVDGVTGGFNFQSAWTTGWVAGSAIGSAASA 481          
BLAST of mRNA_P-wetherbeei_contig148.9.1 vs. uniprot
Match: A0A835ZA93_9STRA (HI0933 family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA93_9STRA)

HSP 1 Score: 191 bits (486), Expect = 3.020e-55
Identity = 103/202 (50.99%), Postives = 130/202 (64.36%), Query Frame = 1
Query:    1 SGISGPAALKLSAWAARELHDVGYRGKVNLNCLPGANA--AAVLQRLERERRALARRAITAFCPLQDAFFFSILPPGPAMSLQPPTDAGIPKRLWQALCDSAGIGREERWADASNAKLRAVAERICALELEVVSKGAFKEEFVTCGGVSLAEIDMRTMCSRVVPGLFFAGEVMDIDGVTGGYNLQSAWTTGFVAGCGVAAAA 600
            SG+SGPAALKLSA+ AR L   GY+G V +N + GA A  A  L   ++ R A ARR +  +CPL+ A                     +PKRLW+AL   AGIG  E+W   SNAKL A+A    A +L VV KGAFK+EFVTCGGV+L  +DM+TM SR VPGL FAGE++D+DG+TGGYN QSAWTT + AG  + ++A
Sbjct:  294 SGVSGPAALKLSAFGARHLQRGGYKGAVVVNWVRGAAASEAEALAAFQKMRTASARREVATYCPLEQA--------------------SVPKRLWKALVQHAGIGDNEQWGGCSNAKLAALARNAAACDLSVVGKGAFKDEFVTCGGVALENLDMKTMESRTVPGLHFAGEIVDVDGITGGYNFQSAWTTSWCAGHAIGSSA 475          
BLAST of mRNA_P-wetherbeei_contig148.9.1 vs. uniprot
Match: UPI0019845D00 (NAD(P)/FAD-dependent oxidoreductase n=3 Tax=Cyanobacteria TaxID=1117 RepID=UPI0019845D00)

HSP 1 Score: 182 bits (461), Expect = 2.910e-52
Identity = 92/196 (46.94%), Postives = 122/196 (62.24%), Query Frame = 1
Query:    4 GISGPAALKLSAWAARELHDVGYRGKVNLNCLPGANAAAVLQRLERERRALARRAITAFCPLQDAFFFSILPPGPAMSLQPPTDAGIPKRLWQALCDSAGIGREERWADASNAKLRAVAERICALELEVVSKGAFKEEFVTCGGVSLAEIDMRTMCSRVVPGLFFAGEVMDIDGVTGGYNLQSAWTTGFVAGCGVA 591
            G+S PA LKLSAWAARELHD  YR K+ +N LP  N   + Q L   R  + ++ I A CP+                        +P+RLW+ L ++ GI R+ RWA+ SN  L  + + +     ++  KGAFKEEFVTCGGV+L EI+ +TM SR  PGL+FAGE++DIDG+TGG+N QSAWTTG++AG  VA
Sbjct:  229 GLSAPAVLKLSAWAARELHDHNYRAKLTINWLPKQNPEQLRQELTAVRGQIPQKTIAANCPVM-----------------------LPRRLWERLTEAVGIDRDRRWAELSNRTLNQLIQELTQGSYQIAGKGAFKEEFVTCGGVNLKEINFKTMESRCCPGLYFAGEILDIDGITGGFNFQSAWTTGWIAGNAVA 401          
BLAST of mRNA_P-wetherbeei_contig148.9.1 vs. uniprot
Match: A0A351L262_9CYAN (Aminoacetone oxidase family FAD-binding enzyme n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A351L262_9CYAN)

HSP 1 Score: 181 bits (458), Expect = 8.520e-52
Identity = 94/196 (47.96%), Postives = 123/196 (62.76%), Query Frame = 1
Query:    4 GISGPAALKLSAWAARELHDVGYRGKVNLNCLPGANAAAVLQRLERERRALARRAITAFCPLQDAFFFSILPPGPAMSLQPPTDAGIPKRLWQALCDSAGIGREERWADASNAKLRAVAERICALELEVVSKGAFKEEFVTCGGVSLAEIDMRTMCSRVVPGLFFAGEVMDIDGVTGGYNLQSAWTTGFVAGCGVA 591
            G+SGPA LKLSAW AR LH+  Y+  + +N LP  N   + Q+L   R  LARR I A CP+                        IP+RLWQ L    GI  E++WA+ SN  L  + + +C  + ++  KG FKEEFVTCGGVSL +++ +TM SR+VPGLFFAGE++DIDGVTGG+N QSAWTT ++AG G+A
Sbjct:  240 GLSGPAVLKLSAWGARLLHECNYQTTLVINWLPQYNRENLHQQLLAVRSQLARRQIAANCPVM-----------------------IPRRLWQQLVSYVGIDPEQKWAELSNKVLNQLIQELCEGKYQIQGKGVFKEEFVTCGGVSLKQVNFKTMESRIVPGLFFAGEILDIDGVTGGFNFQSAWTTAWIAGQGIA 412          
BLAST of mRNA_P-wetherbeei_contig148.9.1 vs. uniprot
Match: A0A1Z4JLQ3_LEPBY (Fumarate reductase/succinate dehydrogenase flavoprotein-like protein n=2 Tax=Leptolyngbya TaxID=47251 RepID=A0A1Z4JLQ3_LEPBY)

HSP 1 Score: 180 bits (456), Expect = 1.540e-51
Identity = 90/196 (45.92%), Postives = 123/196 (62.76%), Query Frame = 1
Query:    4 GISGPAALKLSAWAARELHDVGYRGKVNLNCLPGANAAAVLQRLERERRALARRAITAFCPLQDAFFFSILPPGPAMSLQPPTDAGIPKRLWQALCDSAGIGREERWADASNAKLRAVAERICALELEVVSKGAFKEEFVTCGGVSLAEIDMRTMCSRVVPGLFFAGEVMDIDGVTGGYNLQSAWTTGFVAGCGVA 591
            G+SGPA LKLSAWAARELHD  Y+ ++++N LP  N   + Q L   R  + ++ I A CP+                        +P+RLW+ L ++ GI +E RWA+ SN  L  + + +     ++  KG FK+EFVTCGGV+L EI+ +TM SR  PGL+FAGEV+DIDGVTGG+N QSAWTTG++AG  +A
Sbjct:  229 GVSGPAVLKLSAWAARELHDARYQARLSINWLPKQNPEQLRQELTAVRNQIPQKTIAANCPVM-----------------------LPRRLWERLTEAVGIQKERRWAELSNKTLNQLIQELMQGSYQISGKGVFKDEFVTCGGVNLKEINFKTMESRCCPGLYFAGEVLDIDGVTGGFNFQSAWTTGWIAGNAIA 401          
BLAST of mRNA_P-wetherbeei_contig148.9.1 vs. uniprot
Match: K9WJR4_9CYAN (Flavoprotein, HI0933 family n=5 Tax=Oscillatoriales TaxID=1150 RepID=K9WJR4_9CYAN)

HSP 1 Score: 177 bits (450), Expect = 1.830e-50
Identity = 93/192 (48.44%), Postives = 120/192 (62.50%), Query Frame = 1
Query:    4 GISGPAALKLSAWAARELHDVGYRGKVNLNCLPGANAAAVLQRLERERRALARRAITAFCPLQDAFFFSILPPGPAMSLQPPTDAGIPKRLWQALCDSAGIGREERWADASNAKLRAVAERICALELEVVSKGAFKEEFVTCGGVSLAEIDMRTMCSRVVPGLFFAGEVMDIDGVTGGYNLQSAWTTGFVAG 579
            G+SGPA LKLSAW AR LH+  Y+  + +N LP  N  ++ Q L   +  L RR +T  CP+                        IPKRLW++L  S GIG EERWA+ S   L  + + +   +  +  KG FKEEFVTCGGVSL E+D +TM SR+VPGL+FAGE++DIDGVTGG+N QSAWTTG++AG
Sbjct:  255 GLSGPAVLKLSAWGARFLHEHHYQTPLLVNWLPQYNEESLRQMLLAVKSQLPRRQVTTSCPVP-----------------------IPKRLWESLVASVGIGAEERWAEVSKKALNQLIQELIQGQYSIKGKGIFKEEFVTCGGVSLKEVDFKTMESRLVPGLYFAGEILDIDGVTGGFNFQSAWTTGWLAG 423          
BLAST of mRNA_P-wetherbeei_contig148.9.1 vs. uniprot
Match: UPI0019E7334B (Aminoacetone oxidase family FAD-binding enzyme n=1 Tax=Thermoleptolyngbya sp. M55_K2018_002 TaxID=2747808 RepID=UPI0019E7334B)

HSP 1 Score: 172 bits (436), Expect = 2.480e-50
Identity = 89/197 (45.18%), Postives = 122/197 (61.93%), Query Frame = 1
Query:    4 GISGPAALKLSAWAARELHDVGYRGKVNLNCLPGANAAAVLQRLERERRALARRAITAFCPLQDAFFFSILPPGPAMSLQPPTDAGIPKRLWQALCDSAGIGREERWADASNAKLRAVAERICALELEVVSKGAFKEEFVTCGGVSLAEIDMRTMCSRVVPGLFFAGEVMDIDGVTGGYNLQSAWTTGFVAGCGVAA 594
            G+SGPA LKLSAW AR LH+ GYR    ++ LP  +   V Q L++ +    +RA+            S +PPG            +P+RLW  L D A +  ++RWAD S  +L  + + +   +  +  KG FKEEFVTCGGVSL E+D +TM SRV PGL+FAGE++DIDG+TGG+N QSAWTTG++AG  ++A
Sbjct:   67 GLSGPAVLKLSAWGARALHNCGYRAIAQIHWLPNQSPEQVRQSLQQTKTDWGKRAVR-----------STVPPG----------LPLPRRLWNYLGDRAQVAPDQRWADLSKPQLHHLWQELTQGQYAIAGKGVFKEEFVTCGGVSLKEVDFKTMASRVCPGLYFAGEILDIDGITGGFNFQSAWTTGWLAGRAISA 242          
BLAST of mRNA_P-wetherbeei_contig148.9.1 vs. uniprot
Match: UPI0019AD10DA (NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=UPI0019AD10DA)

HSP 1 Score: 176 bits (447), Expect = 3.350e-50
Identity = 93/192 (48.44%), Postives = 119/192 (61.98%), Query Frame = 1
Query:    4 GISGPAALKLSAWAARELHDVGYRGKVNLNCLPGANAAAVLQRLERERRALARRAITAFCPLQDAFFFSILPPGPAMSLQPPTDAGIPKRLWQALCDSAGIGREERWADASNAKLRAVAERICALELEVVSKGAFKEEFVTCGGVSLAEIDMRTMCSRVVPGLFFAGEVMDIDGVTGGYNLQSAWTTGFVAG 579
            G+SGPA LKLSAW AR LHD  Y+  + +N LP +N  A+ Q+L   +  L RRAI   CP+                        IP+RLW+ L +  GI  E RWA+ SN  L  + + +   +  V  KGAFKEEFVTCGG+SL E+D +TM SR+ PGL FAGE++DIDGVTGG+N QSAWTTG++AG
Sbjct:  237 GLSGPAVLKLSAWGARALHDSQYQATLLVNWLPQSNPEALRQQLLAVKAQLPRRAIATSCPVL-----------------------IPRRLWERLTNHVGITAETRWAELSNKTLNLLLQELTRGQYTVNGKGAFKEEFVTCGGISLKEVDFKTMESRLCPGLHFAGEILDIDGVTGGFNFQSAWTTGWIAG 405          
BLAST of mRNA_P-wetherbeei_contig148.9.1 vs. uniprot
Match: UPI0016832ABA (NAD(P)/FAD-dependent oxidoreductase n=7 Tax=Coleofasciculus TaxID=669368 RepID=UPI0016832ABA)

HSP 1 Score: 176 bits (447), Expect = 4.270e-50
Identity = 90/192 (46.88%), Postives = 121/192 (63.02%), Query Frame = 1
Query:    4 GISGPAALKLSAWAARELHDVGYRGKVNLNCLPGANAAAVLQRLERERRALARRAITAFCPLQDAFFFSILPPGPAMSLQPPTDAGIPKRLWQALCDSAGIGREERWADASNAKLRAVAERICALELEVVSKGAFKEEFVTCGGVSLAEIDMRTMCSRVVPGLFFAGEVMDIDGVTGGYNLQSAWTTGFVAG 579
            G+SGPAALKLSAWAAR LHD  YR  + +N LP  N   + + L   +  L +RAI+  CPL                        +P+RLWQ+L  + GI  E+RWA+ SN  L  + + +   + ++  KG FKEEFVTCGGV+L E++ +TM SR+ PGL+FAGE++DIDGVTGG+N QSAWTT ++AG
Sbjct:  244 GLSGPAALKLSAWAARMLHDCNYRTTLQINWLPQYNPEKLREMLLAVKSQLPQRAISTSCPLP-----------------------LPRRLWQSLIAAVGISGEQRWAELSNKVLNQLIQELSEGKYQIQGKGVFKEEFVTCGGVNLKEVNFKTMESRICPGLYFAGEILDIDGVTGGFNFQSAWTTAYLAG 412          
BLAST of mRNA_P-wetherbeei_contig148.9.1 vs. uniprot
Match: K9VJS3_9CYAN (HI0933 family protein n=9 Tax=Cyanobacteria TaxID=1117 RepID=K9VJS3_9CYAN)

HSP 1 Score: 176 bits (445), Expect = 9.420e-50
Identity = 92/192 (47.92%), Postives = 118/192 (61.46%), Query Frame = 1
Query:    4 GISGPAALKLSAWAARELHDVGYRGKVNLNCLPGANAAAVLQRLERERRALARRAITAFCPLQDAFFFSILPPGPAMSLQPPTDAGIPKRLWQALCDSAGIGREERWADASNAKLRAVAERICALELEVVSKGAFKEEFVTCGGVSLAEIDMRTMCSRVVPGLFFAGEVMDIDGVTGGYNLQSAWTTGFVAG 579
            G+SGPA LKLSAW AR LHD  Y+  V +N LP  NA  + Q+L   +  L+ R I + CP                         +P+RLW+ L  S GI  ++RWAD SN  L  + + +   E ++  KGAFKEEFVTCGGV+L E+D +TM SR  PGLFFAGE++DIDGVTGG+N QSAWTT ++AG
Sbjct:  246 GLSGPAVLKLSAWGARFLHDRHYKTSVLINWLPQYNAEVLRQQLLAVKSQLSHRLIVSSCPFP-----------------------VPRRLWERLTSSIGIDEQKRWADLSNKTLDRLLQELVQGEYQIAGKGAFKEEFVTCGGVNLKEVDFKTMESRRCPGLFFAGEILDIDGVTGGFNFQSAWTTAWLAG 414          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig148.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9K1_9PHAE1.090e-6051.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZA93_9STRA3.020e-5550.99HI0933 family protein n=1 Tax=Tribonema minus TaxI... [more]
UPI0019845D002.910e-5246.94NAD(P)/FAD-dependent oxidoreductase n=3 Tax=Cyanob... [more]
A0A351L262_9CYAN8.520e-5247.96Aminoacetone oxidase family FAD-binding enzyme n=3... [more]
A0A1Z4JLQ3_LEPBY1.540e-5145.92Fumarate reductase/succinate dehydrogenase flavopr... [more]
K9WJR4_9CYAN1.830e-5048.44Flavoprotein, HI0933 family n=5 Tax=Oscillatoriale... [more]
UPI0019E7334B2.480e-5045.18Aminoacetone oxidase family FAD-binding enzyme n=1... [more]
UPI0019AD10DA3.350e-5048.44NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Verruc... [more]
UPI0016832ABA4.270e-5046.88NAD(P)/FAD-dependent oxidoreductase n=7 Tax=Coleof... [more]
K9VJS3_9CYAN9.420e-5047.92HI0933 family protein n=9 Tax=Cyanobacteria TaxID=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig148contigP-wetherbeei_contig148:11791..12898 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog272134.KB731324_gene4414
PFAMsHI0933_like
Model size606
Max annot lvl1117|Cyanobacteria
KEGG koko:K07007
Hectar predicted targeting categoryother localisation
Exons4
Evalue2.53e-52
EggNOG OGsCOG2081@1|root,COG2081@2|Bacteria,1FZZ1@1117|Cyanobacteria,1H7GT@1150|Oscillatoriales
DescriptionPFAM HI0933-like protein
Cds size606
COG categoryS
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186033.803502-CDS-P-wetherbeei_contig148:11790..120851683186033.803502-CDS-P-wetherbeei_contig148:11790..12085Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig148 11791..12085 -
1683186033.8124774-CDS-P-wetherbeei_contig148:12381..124401683186033.8124774-CDS-P-wetherbeei_contig148:12381..12440Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig148 12382..12440 -
1683186033.8205647-CDS-P-wetherbeei_contig148:12522..125821683186033.8205647-CDS-P-wetherbeei_contig148:12522..12582Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig148 12523..12582 -
1683186033.8294544-CDS-P-wetherbeei_contig148:12706..128981683186033.8294544-CDS-P-wetherbeei_contig148:12706..12898Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig148 12707..12898 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig148.9.1prot_P-wetherbeei_contig148.9.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig148 11791..12898 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig148.9.1

>prot_P-wetherbeei_contig148.9.1 ID=prot_P-wetherbeei_contig148.9.1|Name=mRNA_P-wetherbeei_contig148.9.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=202bp
SGISGPAALKLSAWAARELHDVGYRGKVNLNCLPGANAAAVLQRLERERR
ALARRAITAFCPLQDAFFFSILPPGPAMSLQPPTDAGIPKRLWQALCDSA
GIGREERWADASNAKLRAVAERICALELEVVSKGAFKEEFVTCGGVSLAE
IDMRTMCSRVVPGLFFAGEVMDIDGVTGGYNLQSAWTTGFVAGCGVAAAA
AA
back to top

mRNA from alignment at P-wetherbeei_contig148:11791..12898-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig148.9.1 ID=mRNA_P-wetherbeei_contig148.9.1|Name=mRNA_P-wetherbeei_contig148.9.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1108bp|location=Sequence derived from alignment at P-wetherbeei_contig148:11791..12898- (Phaeothamnion wetherbeei SAG_119_79)
TCAGGCATTTCGGGCCCGGCGGCTCTCAAGCTGTCAGCGTGGGCGGCGCG GGAGCTGCACGACGTCGGCTATCGCGGGAAGGTGAACCTCAACTGCCTGC CAGGAGCCAATGCCGCGGCCGTGCTTCAGCGACTGGAGCGAGAGCGCCGA GCGCTGGCCCGTCGCGCCATCACCGCCTTCTGCCCGCTGCAGGTGAGTCG CTGTGCTGCTGCTTGCTGCTTTCGTGAGGGCATATTTTGGTCTTTGGGGC AATGGCAGATGTAAGTGGGCCTCTTTGTTTTGCTTCTCACAAAGGAAAGA TCATATTTGCTTCTAGGATGCTTTCTTTTTCAGCATTCTGCCTCCCGGTC CTGCAATGTCTTTGCAGCCGCCCACCGTCCGAACTCTTGTTATTTCTTGC GACTTCTCTGAAAAGTTGCGCAACCTGCTTTGCTGATTGTTGCTGATGCT CACGACAGGACGCGGGAATACCGAAGCGGCTGTGGCAGGCGCTGTGCGAT TCGGCGGGCATCGGCAGGTACGCTGCAGCCGTTCTGGCATTGCATAGAAA ATGTGGACCACCAGACTTGATTGTTGCCACCAAAGGAAAATCGATGGTTT TCACTATAGGCGAGGTCCAGGCACTTGTTGCTGCTTCTGAGGTCCCCGCT AACTCTAGTCATTGACCTATTGGAGTTTGCTCAACAGTCATTTCCCGCCG TTGCCACTGCCGCCGCCGCTGCCGACGTCATCCCGCCGTTGCCGCCGCCG CTGTTGCTGCCGCTGCCGCCGTCGTGGTGCGCCGCCGCTCATACAACCAC CGCGTGACTGCAGAGAGGAGCGGTGGGCAGATGCGAGCAACGCCAAGCTG CGGGCGGTGGCAGAGCGCATCTGCGCACTGGAGCTGGAGGTGGTCTCTAA GGGGGCGTTTAAAGAGGAGTTCGTGACTTGCGGCGGCGTCTCCCTCGCCG AGATTGACATGAGAACCATGTGCAGCCGCGTCGTGCCGGGACTCTTTTTC GCCGGGGAAGTCATGGACATTGACGGCGTGACGGGCGGGTATAATTTGCA GAGCGCGTGGACGACGGGCTTTGTTGCCGGCTGCGGCGTTGCCGCTGCGG CGGCGGCG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig148:11791..12898-

>mRNA_P-wetherbeei_contig148.9.1 ID=mRNA_P-wetherbeei_contig148.9.1|Name=mRNA_P-wetherbeei_contig148.9.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=606bp|location=Sequence derived from alignment at P-wetherbeei_contig148:11791..12898- (Phaeothamnion wetherbeei SAG_119_79)
TCAGGCATTTCGGGCCCGGCGGCTCTCAAGCTGTCAGCGTGGGCGGCGCG
GGAGCTGCACGACGTCGGCTATCGCGGGAAGGTGAACCTCAACTGCCTGC
CAGGAGCCAATGCCGCGGCCGTGCTTCAGCGACTGGAGCGAGAGCGCCGA
GCGCTGGCCCGTCGCGCCATCACCGCCTTCTGCCCGCTGCAGGATGCTTT
CTTTTTCAGCATTCTGCCTCCCGGTCCTGCAATGTCTTTGCAGCCGCCCA
CCGACGCGGGAATACCGAAGCGGCTGTGGCAGGCGCTGTGCGATTCGGCG
GGCATCGGCAGAGAGGAGCGGTGGGCAGATGCGAGCAACGCCAAGCTGCG
GGCGGTGGCAGAGCGCATCTGCGCACTGGAGCTGGAGGTGGTCTCTAAGG
GGGCGTTTAAAGAGGAGTTCGTGACTTGCGGCGGCGTCTCCCTCGCCGAG
ATTGACATGAGAACCATGTGCAGCCGCGTCGTGCCGGGACTCTTTTTCGC
CGGGGAAGTCATGGACATTGACGGCGTGACGGGCGGGTATAATTTGCAGA
GCGCGTGGACGACGGGCTTTGTTGCCGGCTGCGGCGTTGCCGCTGCGGCG
GCGGCG
back to top