mRNA_P-wetherbeei_contig14799.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14799.1.1 vs. uniprot
Match: A0A7X8XJH1_9BURK (Chromosome partition protein Smc n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XJH1_9BURK) HSP 1 Score: 298 bits (762), Expect = 9.000e-87 Identity = 186/344 (54.07%), Postives = 227/344 (65.99%), Query Frame = 1
Query: 337 IARSETRKKELEADGVLAQEEKIRAEDARVLLKLEGEGLQLQIAEFERLFADGAEAMEEVRRRAADTDAEYALAQKDLDGAENRVRTANNNLNKAQVEAATVEAHVEEALARLGGVPEEADLPTEPKPVEELEKLRAKTNRLRNFLENFGSVNLGAQEDHERLLARYDELYQQVSDLDEGAASLKLIMDEMDAITVVQFKDAYDRVNETFGKMFTDLFQGGTARLELVVPGDMLDSGVEIVACPPGKKLQNLSLLSSGERALSAMAFLLALLTCKPSPMVILDELDAPLDDANVERVANRLLQFSDQSQFLVITHNRKTMEFADHLYGVTMEEPGVSRILSVRL 1368
I R R EL+AD V A E RA AR L+ EG LQ+++ + +A+ EVR+ ++ D + R R +L++ QVE A +EA +E+A RL V + +LP E + LEK RA+ RLR FLENFGSVNLGA+ED ERL R+ EL Q+ DL+E + LK IM EMD ++ QF+ + GG ARLEL P D+L+SGVEIVACPPGKKLQNL+LLSSGERALSA+ FLL+LLT KPSP+V+LDELDAPLDDANVE+VA RLL+FS SQFLVITHNRKTMEFAD LYGVTMEEPGVSR+LSV L
Sbjct: 821 IHRVRQRMDELQADQVAAGAEVERATVARRELEREGAELQVRMDLLAGRLLEEEKALAEVRQESSGQDDHLKSLRVSHAEISRRARELGEDLHRHQVELAGLEARLEQARTRLEEVGDLEELPEESAGFD-LEKARAQARRLRGFLENFGSVNLGAREDFERLTTRHVELKAQIEDLEEASDGLKRIMAEMDRASITQFQTVFXXXXXXXXXXXXXXXGGGWARLELCNPEDLLESGVEIVACPPGKKLQNLTLLSSGERALSAIVFLLSLLTHKPSPIVVLDELDAPLDDANVEKVATRLLEFSTSSQFLVITHNRKTMEFADRLYGVTMEEPGVSRLLSVEL 1163
BLAST of mRNA_P-wetherbeei_contig14799.1.1 vs. uniprot
Match: A0A7Z9PTA8_9BACT (Chromosome segregation protein SMC n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PTA8_9BACT) HSP 1 Score: 272 bits (695), Expect = 7.670e-86 Identity = 141/223 (63.23%), Postives = 177/223 (79.37%), Query Frame = 1
Query: 706 TEPKPVEELEKLRAKTNRLRNFLENFGSVNLGAQEDHERLLARYDELYQQVSDLDEGAASLKLIMDEMDAITVVQFKDAYDRVNETFGKMFTDLFQGGTARLELVVPGDMLDSGVEIVACPPGKKLQNLSLLSSGERALSAMAFLLALLTCKPSPMVILDELDAPLDDANVERVANRLLQFSDQSQFLVITHNRKTMEFADHLYGVTMEEPGVSRILSVRLTK 1374
TEP EE+ + + L++FL+NFG VNLGA+ED+ERL +R+ L Q++DL EG SL+ IM E+D T F++ + +VNETF ++F+DLF GG A+LEL P D L+SGV+IVACPPGK+ QN+ L+SSGERALSA+AFL+ALL CKPSP+VILDELDAPLD+ NVE+VA RLL+FS SQFLV+THNRKTMEFAD LYGVTM EPGVSR+LSV L +
Sbjct: 8 TEPLSPEEMIGCKTRIGHLKHFLDNFGGVNLGAREDYERLFSRHQGLETQITDLVEGKESLQKIMRELDEATTHLFRETFAKVNETFARLFSDLFGGGHAQLELCDPEDPLESGVDIVACPPGKRRQNMMLMSSGERALSAIAFLMALLACKPSPIVILDELDAPLDERNVEKVATRLLEFSTSSQFLVVTHNRKTMEFADLLYGVTMTEPGVSRVLSVELAE 230
BLAST of mRNA_P-wetherbeei_contig14799.1.1 vs. uniprot
Match: A0A355TVV0_9BACT (SMC_N domain-containing protein (Fragment) n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TVV0_9BACT) HSP 1 Score: 266 bits (681), Expect = 1.510e-80 Identity = 164/382 (42.93%), Postives = 237/382 (62.04%), Query Frame = 1
Query: 232 EMRLRAQRDIIQRRLIDVQVDYERKRQMMQETEREIARSETRKKELEADGVLAQEEKIRAEDARVLLKLEGEGLQLQIAEFERLFADGAEAMEEVRRRAADTDAEYALAQKDLDGAENRVRTANNNLNKAQVEAATVEAHVEEALARLGGVPEEADLPTEPKPVE-ELEKLRAKTNRLRNFLENFGSVNLGAQEDHERLLARYDELYQQVSDLDEGAASLKLIMDEMDAITVVQFKDAYDRVNETFGKMFTDLFQGGTARLELVVPGDMLDSGVEIVACPPGKKLQNLSLLSSGERALSAMAFLLALLTCKPSPMVILDELDAPLDDANVERVANRLLQFSDQSQFLVITHNRKTMEFADHLYGVTMEEPGVSRILSVRLTK 1374
E +L A+R ++ RLI+ Q+ + ++ + ERE++ + EL+ D AQ A+V + EGE L IAE + + + +++ +++ A + R L+ A V T ++ AR + P+ E + ++ + ++LRN+L NFGSVNLGA+E++ERL AR DEL Q+SD+++ + + I+ EMD V +FK +++VN TF +F ++F GG A+LEL P D L+SGV+I ACPPGKK+QNL+L SSGERALSA++FL ALLT KPSP+VI DELDAPLDDANVE++A +LL F+ SQFL++THNRKTMEFA LYGVTM++PGVSR+LSV + K
Sbjct: 89 ETQLTAKRSALKVRLIEEQMRLKNAQEALVARERELSNLQRNLDELDEDAQRAQAXXXXLAAAQVRTQSEGENLTRSIAEKQERLRQAIQELXXASSVLXXXNSKLLQIRQEQAKAARQARELGEALSSAVVNKETWQSRFRVEQARWQDYAQSHYDTQAPEFGEVNVTEVAGQASKLRNYLANFGSVNLGAREEYERLKARLDELNAQISDIEQASEGFRRIIAEMDQALVTRFKQVFNQVNRTFSAIFQNIFGGGWAKLELCDPEDWLESGVDICACPPGKKMQNLTLFSSGERALSAISFLFALLTHKPSPVVIFDELDAPLDDANVEKIARKLLDFAASSQFLIVTHNRKTMEFAQRLYGVTMDKPGVSRLLSVTMEK 470
BLAST of mRNA_P-wetherbeei_contig14799.1.1 vs. uniprot
Match: A0A7V3UJ49_9BACT (Chromosome segregation protein SMC n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V3UJ49_9BACT) HSP 1 Score: 206 bits (523), Expect = 8.190e-59 Identity = 124/339 (36.58%), Postives = 200/339 (59.00%), Query Frame = 1
Query: 412 EDARVLLKLEGEGLQLQIAEFERLFADGAEAMEEVRRRAADTDAEYALAQKDLDGAENRV-------RTANNNLNKAQVEAATVEAHVEEALARL-------------GGVPEEADLPTEPKPVEELEKLRAKTNRLRNFLENFGSVNLGAQEDHERLLARYDELYQQVSDLDEGAASLKLIMDEMDAITVVQFKDAYDRVNETFGKMFTDLFQGGTARLELVVPGDMLDSGVEIVACPPGKKLQNLSLLSSGERALSAMAFLLALLTCKPSPMVILDELDAPLDDANVERVANRLLQFSDQSQFLVITHNRKTMEFADHLYGVTMEEPGVSRILSVRL 1368
++ R+ + E Q+ + E + + + E++ + D +Y LA ++L+GAE + R A+ L ++++A + +++ R+ GG E + LP P ++ L+ L N G+VNL A E+++ L RY L Q +DL E SL + ++D T +F +A++ VN +F ++F LF+GG+A L L PG++L++G+EI+A P GK+LQ +SL+S GE+AL+++A L ++ KPSP ILDE+DAPLD+ANV+R N L S +QF++ITHN++TME A+ +YGVTMEEPGVS+I+SV+L
Sbjct: 4 QERRITAQNRQEEYQIAVQETQDTLESLSGSKEKLEKMERIHDEKYVLASRELEGAEQALKQREEAYRVAHEKLKMEEIKSAELRVNLDHIKERIISELGVSLEAWEGGGAAEASSLP----PPHFEREIEESIEHLKGKLANLGNVNLAALEEYQALQERYSFLSGQQADLTESMNSLYATIQKIDTTTETRFMEAFNTVNTSFKEVFQKLFEGGSAELRLTEPGNLLETGIEILAQPSGKRLQKISLMSGGEKALTSIALLFSIFLIKPSPFCILDEVDAPLDEANVDRFLNLLRDLSRTTQFIIITHNKRTMETANLMYGVTMEEPGVSKIVSVQL 338
BLAST of mRNA_P-wetherbeei_contig14799.1.1 vs. uniprot
Match: UPI0010F389B8 (chromosome segregation protein SMC n=1 Tax=Zhaonella formicivorans TaxID=2528593 RepID=UPI0010F389B8) HSP 1 Score: 216 bits (551), Expect = 6.310e-58 Identity = 111/218 (50.92%), Postives = 161/218 (73.85%), Query Frame = 1
Query: 721 VEELEKLRAKTNRLRNFLENFGSVNLGAQEDHERLLARYDELYQQVSDLDEGAASLKLIMDEMDAITVVQFKDAYDRVNETFGKMFTDLFQGGTARLELVVPGDMLDSGVEIVACPPGKKLQNLSLLSSGERALSAMAFLLALLTCKPSPMVILDELDAPLDDANVERVANRLLQFSDQSQFLVITHNRKTMEFADHLYGVTMEEPGVSRILSVRLTK 1374
+++L ++ + +LR L + GSVNL A E+++RL R+D L +Q DL E +L +++E+DAI V +F D Y ++ + F ++F +LF GG A+LEL P ++L++G+EI+A PPGKKLQNL+LLS GERAL+A+A L A+L KPSP +LDE++A LD+ANV+R A L FS ++QF+VI+H + T+E AD LYGVTMEE GVS++LSVRLT+
Sbjct: 969 IDDLAEINNRVRKLRRDLNSLGSVNLSAMEEYQRLRERHDFLCKQEQDLKEAKIALDKVIEEIDAIMVKRFADTYQKLGQAFSQVFRELFGGGNAKLELTEPENLLETGIEIIAQPPGKKLQNLTLLSGGERALTAIALLFAILRVKPSPFCVLDEIEASLDEANVDRFAEFLKVFSQKTQFIVISHRQGTIEAADALYGVTMEESGVSKLLSVRLTE 1186
BLAST of mRNA_P-wetherbeei_contig14799.1.1 vs. uniprot
Match: A0A5C8MTV6_9BACI (Chromosome segregation protein SMC (Fragment) n=1 Tax=Parageobacillus sp. SY1 TaxID=2603622 RepID=A0A5C8MTV6_9BACI) HSP 1 Score: 200 bits (508), Expect = 7.010e-57 Identity = 105/221 (47.51%), Postives = 152/221 (68.78%), Query Frame = 1
Query: 727 ELEKLRAKTNRLRNFLENFGSVNLGAQEDHERLLARYDELYQQVSDLDEGAASLKLIMDEMDAITVVQFKDAYDRVNETFGKMFTDLFQGGTARLELVVPGDMLDSGVEIVACPPGKKLQNLSLLSSGERALSAMAFLLALLTCKPSPMVILDELDAPLDDANVERVANRLLQFSDQSQFLVITHNRKTMEFADHLYGVTMEEPGVSRILSVRLTKDGEMV 1389
++++ R + ++ ++ G+VNLGA +++ER+ RY L +Q +DL + +L ++DEMD +F + + FG +F LF GG A L L P D+L++G+EIVA PPGKKLQNLSLLS GERAL+A+A L ++L +P P +LDE++A LD+A+V R A L QFSDQ+QF+VITH + TME AD LYGVTM+E GVS+++SVRL ++V
Sbjct: 95 DVQEARKRVKLIKRAIDELGTVNLGAIDEYERVSERYQFLTEQKADLQQAKETLHQVIDEMDQEMKKRFLSTCEHIRSHFGDVFRQLFGGGNADLRLTNPDDLLETGIEIVAQPPGKKLQNLSLLSGGERALTAIALLFSILKVRPVPFCVLDEVEAALDEADVHRYAQYLKQFSDQTQFIVITHRKGTMEEADVLYGVTMQESGVSKLVSVRLEDSKQLV 315
BLAST of mRNA_P-wetherbeei_contig14799.1.1 vs. uniprot
Match: A0A7C3IBV6_9BACT (Chromosome partition protein Smc n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C3IBV6_9BACT) HSP 1 Score: 213 bits (543), Expect = 7.390e-57 Identity = 131/319 (41.07%), Postives = 191/319 (59.87%), Query Frame = 1
Query: 439 EGEGLQLQIAEFERLFADGAEAMEEVRRRAADTDAEYALAQKDLDGAENRVRTANNNLNKAQVEAATVEAHVEEALARL----GGVPEEADLPTEPKPVEELEKLRAKTNRLRNFLENFGSVNLGAQEDHERLLARYDELYQQVSDLDEGAASLKLIMDEMDAITVVQFKDAYDRVNETFGKMFTDLFQGGTARLELVVPGDMLDSGVEIVACPPGKKLQNLSLLSSGERALSAMAFLLALLTCKPSPMVILDELDAPLDDANVERVANRLLQFSDQSQFLVITHNRKTMEFADHLYGVTMEEPGVSRILSVRLTKDGE 1383
E + L +++ E AD + + + A+ Y+ +L +R A+ ++ V+ A +E + +A RL G EEA +EP VE A+ RLR + G VN GA ++++R+ RY+ L Q +DL++ A L+ + E+D T F + V+E F MF LF GG+ L L P ++ ++G+E++ PGK+LQN++LLS GERAL+A+A L ALL +PSP V+LDE+DAPLDDAN+ER A+ L +FS +QF+VITHNR TME AD LYGVTMEEPGVS+++SVRL + E
Sbjct: 868 ERDELVQKLSSEESYLADAQNRLNILTEKRAEVSVRYSTIDSELKSLNHRRSEASESIRSCDVKEARLEVQIAQAAERLQEEYGMSAEEALARSEPAEVER--GTAAEVARLRREIRAMGIVNTGAVQEYQRISERYEFLVSQRADLEDARAKLQEGISEIDKSTRDLFMGTFRSVSEYFDIMFKRLFGGGSTELTLTDPSNLTETGIEVIVQIPGKRLQNMTLLSGGERALTAVALLFALLMARPSPFVLLDEVDAPLDDANIERFADVLREFSHNTQFIVITHNRATMEAADTLYGVTMEEPGVSKLISVRLADESE 1184
BLAST of mRNA_P-wetherbeei_contig14799.1.1 vs. uniprot
Match: A0A0B0D264_9BACI (Chromosome segregation protein SMC (Fragment) n=1 Tax=Halobacillus sp. BBL2006 TaxID=1543706 RepID=A0A0B0D264_9BACI) HSP 1 Score: 209 bits (532), Expect = 8.860e-56 Identity = 108/224 (48.21%), Postives = 162/224 (72.32%), Query Frame = 1
Query: 718 PVEELEKLRAKTNRLRNFLENFGSVNLGAQEDHERLLARYDELYQQVSDLDEGAASLKLIMDEMDAITVVQFKDAYDRVNETFGKMFTDLFQGGTARLELVVPGDMLDSGVEIVACPPGKKLQNLSLLSSGERALSAMAFLLALLTCKPSPMVILDELDAPLDDANVERVANRLLQFSDQSQFLVITHNRKTMEFADHLYGVTMEEPGVSRILSVRLTKDGEMV 1389
PVE++++ + ++ +E G+VNLGA ++++R++ RYD L Q DL E +L +++EMD +F D + ++ + FG++F DLF GG A L+L PG+ML++GV+IVA PPGKKLQNLSLLS GERAL+A+A L ++L +P P +LDE++A LD+ANV+R A L +FS ++QF+VITH + TME +D LYGVTM+E GVS+++SVRL + E++
Sbjct: 706 PVEDIDRASTQVKLIKRSIEELGTVNLGAIDEYDRIVERYDFLKGQQDDLLEAKQTLHTVINEMDGEMDRRFTDTFTKIRDEFGEVFRDLFGGGRADLQLTDPGNMLETGVDIVAQPPGKKLQNLSLLSGGERALTAIALLFSILRVRPVPFCVLDEVEAALDEANVDRFARFLKEFSAKTQFIVITHRKGTMEESDVLYGVTMQESGVSKLVSVRLEETPELL 929
BLAST of mRNA_P-wetherbeei_contig14799.1.1 vs. uniprot
Match: UPI001FD3D9DC (chromosome segregation protein SMC n=2 Tax=unclassified Halobacillus TaxID=2636472 RepID=UPI001FD3D9DC) HSP 1 Score: 210 bits (534), Expect = 1.140e-55 Identity = 111/223 (49.78%), Postives = 160/223 (71.75%), Query Frame = 1
Query: 721 VEELEKLRAKTNRLRNFLENFGSVNLGAQEDHERLLARYDELYQQVSDLDEGAASLKLIMDEMDAITVVQFKDAYDRVNETFGKMFTDLFQGGTARLELVVPGDMLDSGVEIVACPPGKKLQNLSLLSSGERALSAMAFLLALLTCKPSPMVILDELDAPLDDANVERVANRLLQFSDQSQFLVITHNRKTMEFADHLYGVTMEEPGVSRILSVRLTKDGEMV 1389
VE+++ K ++ +E G+VNLGA E+++R++ RYD L Q +DL E +L I+ EMD+ +F D + ++ FG++F DLF GG A L+L P DML++GV+IVA PPGKKLQNLSLLS GERAL+A+A L ++L +P P +LDE++A LD+ANV+R A L +FS+++QF+VITH + TME +D LYGVTM+E GVS+++SVRL + E+V
Sbjct: 964 VEDVKTTSTKVKLIKRAIEELGTVNLGAIEEYDRIVERYDFLTGQQTDLLEAKETLHSIIREMDSEMERRFDDTFTKIRSEFGEVFKDLFGGGKADLQLTKPDDMLETGVDIVAQPPGKKLQNLSLLSGGERALTAIALLFSILRVRPVPFCVLDEVEAALDEANVDRFAKFLKEFSERTQFIVITHRKGTMEESDVLYGVTMQESGVSKLVSVRLEETAELV 1186
BLAST of mRNA_P-wetherbeei_contig14799.1.1 vs. uniprot
Match: A0A553SP32_NIACI (Chromosome partition protein Smc n=4 Tax=Bacillaceae TaxID=186817 RepID=A0A553SP32_NIACI) HSP 1 Score: 209 bits (533), Expect = 1.540e-55 Identity = 133/300 (44.33%), Postives = 186/300 (62.00%), Query Frame = 1
Query: 520 RRAADTDAEYALAQKDLDGAENR---------VRTANNNLNKAQVEAATVEAHV-EEALARLGGVPEEADLPTEPKPVEELEKLRAKTNRLRNFLENFGSVNLGAQEDHERLLARYDELYQQVSDLDEGAASLKLIMDEMDAITVVQFKDAYDRVNETFGKMFTDLFQGGTARLELVVPGDMLDSGVEIVACPPGKKLQNLSLLSSGERALSAMAFLLALLTCKPSPMVILDELDAPLDDANVERVANRLLQFSDQSQFLVITHNRKTMEFADHLYGVTMEEPGVSRILSVRLTKDGEMV 1389
RRA + L + DLD E R ++ LN+ VE T +++ EE + G EE L + LE R K ++ +E G+VNLGA E++ER+ RYD L +Q +DL+E +L L++DEMD +F+ ++ + F +F LF GG A L L P D+L++GV+IVA PPGKKLQNLSLLS GERAL+A+A L A+L +P P ILDE++A LD+ANV R ++ L +SD++QF+VITH + TME AD LYGVTM+E GVSR++SVRL++ E+V
Sbjct: 893 RRAERLQLQMQLDEMDLDVKETRRIHRGIVQALKDEEVKLNRIDVELDTRLSNLREEYMMSFEGAKEEYPLTLD------LEDARKKVKLIKLAMEELGTVNLGAIEEYERISERYDFLLEQKTDLEEAKDTLYLVIDEMDDEMKKRFQQTFEGIQSHFEGVFQRLFGGGHAALRLTNPDDLLNTGVDIVAQPPGKKLQNLSLLSGGERALTAIALLFAILKVRPVPFCILDEVEAALDEANVFRFSSYLKAYSDETQFIVITHRKGTMEEADVLYGVTMQESGVSRLVSVRLSETSELV 1186 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14799.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14799.1.1 >prot_P-wetherbeei_contig14799.1.1 ID=prot_P-wetherbeei_contig14799.1.1|Name=mRNA_P-wetherbeei_contig14799.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=463bp MRLLKQESADDAADTRRRQADLDRATKGLKKAEEEMDALMNREVAAIQELback to top mRNA from alignment at P-wetherbeei_contig14799:143..1531+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14799.1.1 ID=mRNA_P-wetherbeei_contig14799.1.1|Name=mRNA_P-wetherbeei_contig14799.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1389bp|location=Sequence derived from alignment at P-wetherbeei_contig14799:143..1531+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14799:143..1531+ >mRNA_P-wetherbeei_contig14799.1.1 ID=mRNA_P-wetherbeei_contig14799.1.1|Name=mRNA_P-wetherbeei_contig14799.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1389bp|location=Sequence derived from alignment at P-wetherbeei_contig14799:143..1531+ (Phaeothamnion wetherbeei SAG_119_79)back to top |