mRNA_P-wetherbeei_contig14763.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14763.1.1 vs. uniprot
Match: A0A2Z7AGM8_9LAMI (Integrase catalytic domain-containing protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7AGM8_9LAMI) HSP 1 Score: 70.9 bits (172), Expect = 9.850e-13 Identity = 36/99 (36.36%), Postives = 58/99 (58.59%), Query Frame = 1
Query: 22 QNTSADPRKGAETLQLWHQRLGHSGDHVLPRLMSDSNTRVPRLDFDLRQFCEACVMGKSHRTNTNTAVQQRTVSRLELVHSDIFGPLPVRSRTGNRYAM 318
++T A GA + LWH RLGH + + LMS N ++P L + CE+C+ GK + + + ++ ++LELVH+D++GP PV S G+RY +
Sbjct: 19 RDTLAAVDAGANS-SLWHCRLGHMSEKGMKMLMS--NGKLPDLKSVEHKMCESCIFGKQRKVSFSKGGREPKAAKLELVHTDVWGPSPVPSLGGSRYYV 114
BLAST of mRNA_P-wetherbeei_contig14763.1.1 vs. uniprot
Match: A0A8J5Y992_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5Y992_9ROSI) HSP 1 Score: 73.2 bits (178), Expect = 1.040e-12 Identity = 36/89 (40.45%), Postives = 46/89 (51.69%), Query Frame = 1
Query: 55 ETLQLWHQRLGHSGDHVLPRLMSDSNTRVPRLDFDLRQFCEACVMGKSHRTNTNTAVQQRTVSRLELVHSDIFGPLPVRSRTGNRYAML 321
E +LWHQRLGH+ + R++S CE C MGK R T R S+LELVHSD+ GP+ S +GNRY +L
Sbjct: 396 ENTKLWHQRLGHANFKSMARMVSKEMVENFTKSVQNENVCEVCQMGKQARLPFPTNTTWRASSKLELVHSDVCGPMRTESLSGNRYFIL 484
BLAST of mRNA_P-wetherbeei_contig14763.1.1 vs. uniprot
Match: A0A4Y1R4D1_PRUDU (Multidrug resistance-associated protein 9 n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1R4D1_PRUDU) HSP 1 Score: 72.8 bits (177), Expect = 1.340e-12 Identity = 37/89 (41.57%), Postives = 52/89 (58.43%), Query Frame = 1
Query: 61 LQLWHQRLGHSGDHVLPRLMSDSNT--RVPRLDFDLRQFCEACVMGKSHRTNTNTAVQQRTVSRLELVHSDIFGPLPVRSRTGNRYAML 321
LQ WH+RLGHS + + +L+ D +P L+ + CE C++GK HR + R S LELVH+DI GP+ S +GNRY +L
Sbjct: 407 LQTWHKRLGHSNERSI-KLLEDQGMVHGLPHLE-QISVVCEGCMLGKQHRDSFPLESTWRATSPLELVHTDICGPMKTESISGNRYFLL 493
BLAST of mRNA_P-wetherbeei_contig14763.1.1 vs. uniprot
Match: A0A4Y1QXI5_PRUDU (Multidrug resistance-associated protein 9 n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1QXI5_PRUDU) HSP 1 Score: 72.8 bits (177), Expect = 1.420e-12 Identity = 37/89 (41.57%), Postives = 50/89 (56.18%), Query Frame = 1
Query: 58 TLQLWHQRLGHSGDHVLPRLMSDSNTR-VPRLDFDLRQFCEACVMGKSHRTNTNTAVQQRTVSRLELVHSDIFGPLPVRSRTGNRYAML 321
+LQ WH+RLGH D + L + +P L+ DL CE C +GK HR + R S LELVH+DI GP+ + S + NRY +L
Sbjct: 470 SLQTWHKRLGHLNDQSIKMLANQDMVHGLPSLEKDLA-VCEGCKLGKQHRDSFPAESTWRAQSPLELVHTDICGPMQIASMSENRYFLL 557
BLAST of mRNA_P-wetherbeei_contig14763.1.1 vs. uniprot
Match: A0A2P6UZ15_9CHLO (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UZ15_9CHLO) HSP 1 Score: 71.6 bits (174), Expect = 3.330e-12 Identity = 46/113 (40.71%), Postives = 59/113 (52.21%), Query Frame = 1
Query: 16 RIQNTSADPR-----KGAETLQLWHQRLGHSGDHVLPRLMSDSNT--RVPRLDFDL---RQFCEACVMGKSHRTNTNTAVQQRTVSRLELVHSDIFGPLPVRSRTGNRYAMLV 324
R+ TS P + AET LWH+RLGH G L + M D T RV R +F CE C +GK HR NT+ T + LEL+H+D+ GPLPV S G+ Y +
Sbjct: 330 RLAPTSGAPHTAYAARTAETPHLWHRRLGHLGFDNLAK-MPDMVTGIRVTRAEFKTAGANALCEPCTLGKQHRLPFNTSTSA-TKAPLELLHTDLCGPLPVASAGGSLYFNTI 440
BLAST of mRNA_P-wetherbeei_contig14763.1.1 vs. uniprot
Match: A0A3S3NIE3_9ACAR (Uncharacterized protein (Fragment) n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A3S3NIE3_9ACAR) HSP 1 Score: 71.2 bits (173), Expect = 4.860e-12 Identity = 37/107 (34.58%), Postives = 57/107 (53.27%), Query Frame = 1
Query: 7 NLYRIQNT---SADPRKGAETLQLWHQRLGHSGDHVLPRLMSDSNTRVPRLDFDLRQFCEACVMGKSHRTNTNTAVQQRTVSRLELVHSDIFGPLPVRSRTGNRYAM 318
NLY ++ +A+ G ET+QLWH RLGH + + +L ++ + + D+ CE+CV GK+ R T LELVHSD+ GP+ + +G RY +
Sbjct: 174 NLYLFRSNYKETANKESGKETIQLWHHRLGHVSNEKIKQLANNDLLSINTCEKDV--LCESCVKGKTTRKPFPKKSDSMTKEVLELVHSDVCGPMQTNTVSGRRYFV 278
BLAST of mRNA_P-wetherbeei_contig14763.1.1 vs. uniprot
Match: A0A8J5XPH4_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5XPH4_9ROSI) HSP 1 Score: 71.2 bits (173), Expect = 4.880e-12 Identity = 35/90 (38.89%), Postives = 47/90 (52.22%), Query Frame = 1
Query: 52 AETLQLWHQRLGHSGDHVLPRLMSDSNTRVPRLDFDLRQFCEACVMGKSHRTNTNTAVQQRTVSRLELVHSDIFGPLPVRSRTGNRYAML 321
+E +LWHQRLGH+ + +++S CE C MGK R T R S+LELVHSD+ GP+ S +GNRY +L
Sbjct: 304 SEDSKLWHQRLGHANFKSMAQMVSKEMVENFTKTVQSEDVCEVCQMGKQARLPFPTNTTWRASSKLELVHSDVCGPMRTESLSGNRYFIL 393
BLAST of mRNA_P-wetherbeei_contig14763.1.1 vs. uniprot
Match: A0A6J1BQC5_9ROSI (uncharacterized protein LOC110428874 n=1 Tax=Herrania umbratica TaxID=108875 RepID=A0A6J1BQC5_9ROSI) HSP 1 Score: 67.4 bits (163), Expect = 4.880e-12 Identity = 32/92 (34.78%), Postives = 50/92 (54.35%), Query Frame = 1
Query: 55 ETLQLWHQRLGHSGDHVLPRLMSDS---NTRVPRLDFDLRQFCEACVMGKSHRTNTNTAVQQRTVSRLELVHSDIFGPLPVRSRTGNRYAML 321
+ +LWH RLGH + + L + +LDF CE C+ GK HR +TA RT ++ +HSD++GP PV S++G+ Y ++
Sbjct: 32 DVTRLWHMRLGHMSEKGMTELSKHGLLCGQKTGKLDF-----CEHCIYGKQHRVKFSTATH-RTKCTVDYIHSDLWGPSPVASKSGSLYMLI 117
BLAST of mRNA_P-wetherbeei_contig14763.1.1 vs. uniprot
Match: A0A2I0I9B0_PUNGR (gag_pre-integrs domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0I9B0_PUNGR) HSP 1 Score: 67.0 bits (162), Expect = 5.710e-12 Identity = 35/87 (40.23%), Postives = 47/87 (54.02%), Query Frame = 1
Query: 67 LWHQRLGHSGDHVLPRLMSDSNTRVPRLDFDLRQFCEACVMGKSHRTNTNTAVQQRTVSRLELVHSDIFGPLPVRSRTGNRYAMLVN 327
LWH RLGH + + +L S ++P L CE CV GK R + + A + +LELVHSD++GP PV S G Y M +N
Sbjct: 33 LWHCRLGHMSEKGMKQLCSKG--KLPGLKTVELGLCEDCVFGKQKRVSFSKAGRTLKEQKLELVHSDLWGPTPVTSLGGASYYMTLN 117
BLAST of mRNA_P-wetherbeei_contig14763.1.1 vs. uniprot
Match: A0A8J6D2N4_9ROSI (Integrase catalytic domain-containing protein n=2 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6D2N4_9ROSI) HSP 1 Score: 70.9 bits (172), Expect = 6.570e-12 Identity = 34/86 (39.53%), Postives = 45/86 (52.33%), Query Frame = 1
Query: 64 QLWHQRLGHSGDHVLPRLMSDSNTRVPRLDFDLRQFCEACVMGKSHRTNTNTAVQQRTVSRLELVHSDIFGPLPVRSRTGNRYAML 321
+LWHQRLGH+ + +++S CE C MGK R T R S+LELVHSD+ GP+ S +GNRY +L
Sbjct: 458 KLWHQRLGHANFKSMAQMVSKEMVENFTKTVQSEDVCEVCQMGKQARLPFPTNTTWRATSKLELVHSDVCGPMRTESLSGNRYFIL 543 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14763.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14763.1.1 >prot_P-wetherbeei_contig14763.1.1 ID=prot_P-wetherbeei_contig14763.1.1|Name=mRNA_P-wetherbeei_contig14763.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=71bp MSDSNTRVPRLDFDLRQFCEACVMGKSHRTNTNTAVQQRTVSRLELVHSDback to top mRNA from alignment at P-wetherbeei_contig14763:100..449+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14763.1.1 ID=mRNA_P-wetherbeei_contig14763.1.1|Name=mRNA_P-wetherbeei_contig14763.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=350bp|location=Sequence derived from alignment at P-wetherbeei_contig14763:100..449+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14763:100..449+ >mRNA_P-wetherbeei_contig14763.1.1 ID=mRNA_P-wetherbeei_contig14763.1.1|Name=mRNA_P-wetherbeei_contig14763.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=213bp|location=Sequence derived from alignment at P-wetherbeei_contig14763:100..449+ (Phaeothamnion wetherbeei SAG_119_79)back to top |