mRNA_P-wetherbeei_contig1476.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1476.1.2 vs. uniprot
Match: A0A7S3URR6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URR6_HETAK) HSP 1 Score: 153 bits (387), Expect = 1.380e-39 Identity = 80/111 (72.07%), Postives = 94/111 (84.68%), Query Frame = 2
Query: 566 GGGGEERPA----SIRNPGRISILVVDDSNISSKLAMRKLVALGHDTMHAENGQVALELLRRFPADFDLVLLDIVMPVMDGIELLTVMQHDMALRCIPIVMLSGLEDEMLG 886
G GGE RPA +IRN ++S+L+VDDSNISSKLA+RKLV+LG+DTMHAENG+VAL+LLRRFP DFDLVLLDIVMPVMDG+ELLT M+ D LR +P+ MLSGLEDE L
Sbjct: 6 GAGGEGRPAGERETIRNSDKLSVLIVDDSNISSKLALRKLVSLGYDTMHAENGKVALQLLRRFPGDFDLVLLDIVMPVMDGVELLTTMKADALLRAVPVAMLSGLEDEALA 116
BLAST of mRNA_P-wetherbeei_contig1476.1.2 vs. uniprot
Match: A0A835ZEX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEX5_9STRA) HSP 1 Score: 121 bits (304), Expect = 1.270e-26 Identity = 68/100 (68.00%), Postives = 82/100 (82.00%), Query Frame = 2
Query: 587 PASIRNPGRISILVVDDSNISSKLAMRKLVALGHDTMHAENGQVALELLRRFPADFDLVLLDIVMPVMDGIELLTVMQHDMALRCIPIVMLSGLEDEMLG 886
P+S RI+ILVVDDSNISSKLA+RKL +LGH T+HA+NG ALE+LR + DLVLLDIVMPVMDG+ELLT++Q D ALR IP+VMLSGLED++L
Sbjct: 91 PSSTVGATRITILVVDDSNISSKLAVRKLASLGHRTVHADNGLNALEMLRS-GQEVDLVLLDIVMPVMDGVELLTILQADEALRHIPVVMLSGLEDKILA 189
BLAST of mRNA_P-wetherbeei_contig1476.1.2 vs. uniprot
Match: A0A7S2XTQ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XTQ4_9STRA) HSP 1 Score: 103 bits (258), Expect = 8.300e-23 Identity = 52/64 (81.25%), Postives = 58/64 (90.62%), Query Frame = 2
Query: 575 GEERPASIRNPGRISILVVDDSNISSKLAMRKLVALGHDTMHAENGQVALELLRRFPADFDLVL 766
G ++ ++IRN GR SILVVDDSNISSKLA+RKL ALGHDTMHAENGQVALELL+RFP DFDLVL
Sbjct: 38 GHQQGSTIRNQGRFSILVVDDSNISSKLAVRKLAALGHDTMHAENGQVALELLQRFPTDFDLVL 101
BLAST of mRNA_P-wetherbeei_contig1476.1.2 vs. uniprot
Match: D8LNV9_ECTSI (Response receiver n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV9_ECTSI) HSP 1 Score: 94.7 bits (234), Expect = 6.040e-17 Identity = 63/129 (48.84%), Postives = 84/129 (65.12%), Query Frame = 2
Query: 539 VPLTPSMTWGGGGEERPASIRNPGR------------ISILVVDDSNISSKLAMRKLVALGHDTMHAENGQVALELLRRFPADFDLVLLDIVMPVMDGIELLTVMQHDMALRCIPIVMLSGLED-EMLG 886
V L + T GGGG +R S +P R +++LVV+DS ISSKLA+RKL ALG T+ ENG+ AL+L+R P LVL D++MPVMDGIELL +++ D LR IPIV++S LE E++G
Sbjct: 224 VALGSARTEGGGGGDRGLS-ESPSRRESASSTLPTANMAVLVVEDSVISSKLAIRKLRALGCSTISVENGRAALDLMRGDPDRISLVLADVIMPVMDGIELLRIVKDDPILRKIPIVVVSSLERRELVG 351
BLAST of mRNA_P-wetherbeei_contig1476.1.2 vs. uniprot
Match: A0A835ZHY4_9STRA (CheY-like superfamily protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHY4_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 2.170e-16 Identity = 54/109 (49.54%), Postives = 73/109 (66.97%), Query Frame = 2
Query: 587 PASIRNPGR---------ISILVVDDSNISSKLAMRKLVALGHDTMHAENGQVALELLRRFPADFDLVLLDIVMPVMDGIELLTVMQHDMALRCIPIVMLSGLEDEMLG 886
PAS+ G+ +S+LVVDDS+IS KLA R L ++ A +G+ AL LL+R PA FD VLLDIVMP +DGIE+L+ ++H+ AL +P+ MLSGLED+ L
Sbjct: 64 PASLSQQGQRLHPLDGRQVSVLVVDDSHISCKLASRALESINLVPKVAYSGEAALMLLKRDPAAFDFVLLDIVMPGLDGIEVLSRIRHNPALARLPVAMLSGLEDKTLA 172
BLAST of mRNA_P-wetherbeei_contig1476.1.2 vs. uniprot
Match: A0A6H5K9C6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9C6_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 4.310e-15 Identity = 51/97 (52.58%), Postives = 69/97 (71.13%), Query Frame = 2
Query: 581 ERPASIRNPGRISILVVDDSNISSKLAMRKLVALGHDTMHAENGQVALELLRRFPADFDLVLLDIVMPVMDGIELLTVMQHDMALRCIPIVMLSGLE 871
E +S +++LVV+DS ISSKLA++KL ALG T+ ENG+ AL+L+R P LVL D++MPVMDGIELL V++ D LR IP+V++S LE
Sbjct: 244 ESASSTLPTANMTVLVVEDSVISSKLAIQKLRALGCSTISVENGRAALDLMRGDPDRISLVLADVIMPVMDGIELLRVVKDDPILRKIPVVVVSSLE 340
BLAST of mRNA_P-wetherbeei_contig1476.1.2 vs. uniprot
Match: A0A0P9EYV0_9CHLR (Response regulatory domain-containing protein (Fragment) n=1 Tax=Kouleothrix aurantiaca TaxID=186479 RepID=A0A0P9EYV0_9CHLR) HSP 1 Score: 79.7 bits (195), Expect = 4.460e-14 Identity = 40/85 (47.06%), Postives = 61/85 (71.76%), Query Frame = 2
Query: 620 ILVVDDSNISSKLAMRKLVALGHDTMHAENGQVALELLRRFPADFDLVLLDIVMPVMDGIELLTVMQHDMALRCIPIVMLSGLED 874
+L+VDD+ ++ KL R L LGH T A +G+ ALELLR P FDLVLLD++MP +DG E+L ++ D ALR +P++M++ +++
Sbjct: 4 VLIVDDNLVNRKLLARALADLGHRTSAAADGEAALELLRAEPDTFDLVLLDVLMPRLDGYEVLAAIKSDPALRELPVIMITAVDE 88
BLAST of mRNA_P-wetherbeei_contig1476.1.2 vs. uniprot
Match: A0A2V5VGR2_9BACT (Uncharacterized protein n=2 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5VGR2_9BACT) HSP 1 Score: 82.4 bits (202), Expect = 1.390e-12 Identity = 52/113 (46.02%), Postives = 77/113 (68.14%), Query Frame = 2
Query: 536 AVPLTPSMTWGGGGEERPASIRNPGRISILVVDDSNISSKLAMRKLVALGHDTMHAENGQVALELLRRFPADFDLVLLDIVMPVMDGIELLTVMQHDMALRCIPIVMLSGLED 874
A+ L PS + G +PA I +PGRI LVVDDS ++ + R+L GH + AENG+ AL++L + +DFDLVLLDI+MP MDG ++L +++D LR +P++MLS L++
Sbjct: 130 ALSLLPSANFSG----KPAVI-SPGRI--LVVDDSEMNRDMLCRRLDRQGHKYVCAENGRQALDVLAQ--SDFDLVLLDIIMPEMDGYQVLNALKNDPKLRHLPVIMLSALDE 233
BLAST of mRNA_P-wetherbeei_contig1476.1.2 vs. uniprot
Match: A0A536WZN2_9PROT (Response regulator (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536WZN2_9PROT) HSP 1 Score: 73.6 bits (179), Expect = 3.050e-12 Identity = 40/84 (47.62%), Postives = 58/84 (69.05%), Query Frame = 2
Query: 620 ILVVDDSNISSKLAMRKLVALGHDTMHAENGQVALELLRRFPADFDLVLLDIVMPVMDGIELLTVMQHDMALRCIPIVMLSGLE 871
+LVVDD+ ++ L R L + HD AENG+ ALE+LRR FDL+LLDI MP MDG ++L +++D+ LR +P+++ S LE
Sbjct: 11 LLVVDDNKVNRLLLKRNLELMSHDAALAENGRAALEMLRR--ETFDLLLLDIEMPEMDGFQVLEQIRNDLQLRDLPVIVTSSLE 92
BLAST of mRNA_P-wetherbeei_contig1476.1.2 vs. uniprot
Match: A0A7S3URM2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URM2_HETAK) HSP 1 Score: 79.7 bits (195), Expect = 1.060e-11 Identity = 46/92 (50.00%), Postives = 66/92 (71.74%), Query Frame = 2
Query: 611 RISILVVDDSNISSKLAMRKLVALGHDTMHAENGQVALELLRRFPADFDLVLLDIVMPVMDGIELLTVMQHDMALRCIPIVMLSGLEDEMLG 886
+ ILVVDDS+IS K+A+R+L LG++ A +G+ ALE + P +DL+LLDIVMP +DGIE+L+ ++ L+ +PI MLSGLED+ L
Sbjct: 187 KFCILVVDDSHISCKIAVRQLGKLGYEVDTAFSGEEALEKVGATPHRYDLMLLDIVMPGLDGIEVLSKVKGTAHLQHLPICMLSGLEDQTLA 278 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1476.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1476.1.2 >prot_P-wetherbeei_contig1476.1.2 ID=prot_P-wetherbeei_contig1476.1.2|Name=mRNA_P-wetherbeei_contig1476.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=341bp MQELLSRVSPPAHGSRRKRGSGEAGGGGAGGVGAGGGASSSHVHPTAVATback to top mRNA from alignment at P-wetherbeei_contig1476:2..3205- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1476.1.2 ID=mRNA_P-wetherbeei_contig1476.1.2|Name=mRNA_P-wetherbeei_contig1476.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3204bp|location=Sequence derived from alignment at P-wetherbeei_contig1476:2..3205- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1476:2..3205- >mRNA_P-wetherbeei_contig1476.1.2 ID=mRNA_P-wetherbeei_contig1476.1.2|Name=mRNA_P-wetherbeei_contig1476.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1023bp|location=Sequence derived from alignment at P-wetherbeei_contig1476:2..3205- (Phaeothamnion wetherbeei SAG_119_79)back to top |