mRNA_P-wetherbeei_contig1474.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1474.3.1
Unique NamemRNA_P-wetherbeei_contig1474.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1474.3.1 vs. uniprot
Match: A0A836C8Z2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Z2_9STRA)

HSP 1 Score: 311 bits (798), Expect = 3.080e-103
Identity = 140/228 (61.40%), Postives = 176/228 (77.19%), Query Frame = 2
Query:   98 QSRLQRERDLNFWMNAGIIGLVGLAVTLKIATVNLEVSRGWTVWEALLRIPQDNWDAYLETLRSNPIVVKAVTSCSVYSLGDGTAQMYEGRSLAELDRGRLLRSAVAGLMGHGPLSHYWYEVCERIFDVIGWNGFWWTVAPKIAVDQLCWGPIWNGVYVFLIGLLKGDDISKVWETVQSTSLPLLLSGLKLWPLAHVITYGLVPTENRLLWVDTVEILWVTILSKQAA 781
            +S ++ +R++NF +N+G +  V + V +++A+  L+ SRGWT  E LLR+PQDNW  Y++ LRS+P++VKAVTS +VY+LGD TAQ   G  LAELDR R+ RSA AG +GHGPLSH WYEVCE +F  IGWNG WW   PKI  DQL WGPIWN  YV L+GL+K D  ++VWE V ST +PL++SGLKLWP  H++TYGL+P ENRLLWVDTVEILWVTILSKQAA
Sbjct:   50 KSEMEEDREVNFLVNSGFLIAVIVTVAVRLASSTLDASRGWTAEEVLLRLPQDNWQGYMDMLRSHPVLVKAVTSGTVYALGDWTAQTTNGTPLAELDRWRVARSAAAGFVGHGPLSHCWYEVCEALFSAIGWNGAWWVTLPKIMTDQLVWGPIWNATYVVLVGLMKRDAPARVWEAVTSTMVPLVVSGLKLWPAVHLVTYGLIPPENRLLWVDTVEILWVTILSKQAA 277          
BLAST of mRNA_P-wetherbeei_contig1474.3.1 vs. uniprot
Match: A0A6H5KX44_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX44_9PHAE)

HSP 1 Score: 292 bits (748), Expect = 2.540e-95
Identity = 131/228 (57.46%), Postives = 168/228 (73.68%), Query Frame = 2
Query:   98 QSRLQRERDLNFWMNAGIIGLVGLAVTLKIATVNLEVSRGWTVWEALLRIPQDNWDAYLETLRSNPIVVKAVTSCSVYSLGDGTAQMYEGRSLAELDRGRLLRSAVAGLMGHGPLSHYWYEVCERIFDVIGWNGFWWTVAPKIAVDQLCWGPIWNGVYVFLIGLLKGDDISKVWETVQSTSLPLLLSGLKLWPLAHVITYGLVPTENRLLWVDTVEILWVTILSKQAA 781
            ++R +  + LN + NAG +  V L     +  VN EVSRGWT+ E +LR+P DNWD Y E LR +P+ VKA TS  VY+LGD  AQ  EG  LAE++R R++RSA+AGL+ HGPLSH WY VCE +FD++GWN +WW  APKI  DQL WGP WN VY+  +G+L  D  + +WE + ST+LPL+++G++LWPLAHV+TYGLVP ENRLLWVD VEI+WVTILS QAA
Sbjct:  103 KNREEENKKLNLFANAGFLAGVALFTIAVVFGVNSEVSRGWTIGEYILRVPLDNWDGYSEMLRQSPVQVKACTSGIVYALGDLVAQSMEGTELAEIERQRVVRSAMAGLLLHGPLSHVWYNVCEGLFDIVGWNEYWWVPAPKIITDQLLWGPAWNAVYIAFLGVLNKDSSAVIWEAITSTALPLVIAGIRLWPLAHVVTYGLVPKENRLLWVDAVEIVWVTILSSQAA 330          
BLAST of mRNA_P-wetherbeei_contig1474.3.1 vs. uniprot
Match: W7TQH1_9STRA (Peroxisomal membrane 22 kDa (Mpv17 pmp22) family protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQH1_9STRA)

HSP 1 Score: 295 bits (754), Expect = 4.510e-95
Identity = 134/221 (60.63%), Postives = 166/221 (75.11%), Query Frame = 2
Query:  119 RDLNFWMNAGIIGLVGLAVTLKIATVNLEVSRGWTVWEALLRIPQDNWDAYLETLRSNPIVVKAVTSCSVYSLGDGTAQMYEGRSLAELDRGRLLRSAVAGLMGHGPLSHYWYEVCERIFDVIGWNGFWWTVAPKIAVDQLCWGPIWNGVYVFLIGLLKGDDISKVWETVQSTSLPLLLSGLKLWPLAHVITYGLVPTENRLLWVDTVEILWVTILSKQAA 781
            R LNF +N G+I  V   V  K+ TV+L+V RGWT  E   RIP DNWD Y+  L  +P+ VKAVTS SVY+LGDG AQ+YEG++L E+DRGR+ RS +AG +GHGPLSH+WY V E  F  +GW G WWT  PKI VDQL W PIWNG Y+FL+G +K + + ++  TV+STS  L+ SGLKLWPLAHV+TYG++P ENRLLWVD VEILWVTILS++AA
Sbjct:  121 RQLNFLLNVGLISAVAALVLAKVVTVDLDVWRGWTPAEIFTRIPLDNWDGYMNVLSLHPVFVKAVTSGSVYTLGDGVAQLYEGKTLGEIDRGRVARSGIAGFVGHGPLSHWWYGVSEDFFGWLGWEG-WWTTFPKITVDQLVWSPIWNGCYIFLLGAMKREALGEIVNTVKSTSFSLITSGLKLWPLAHVVTYGVIPVENRLLWVDLVEILWVTILSREAA 340          
BLAST of mRNA_P-wetherbeei_contig1474.3.1 vs. uniprot
Match: A0A7S1VV68_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VV68_9STRA)

HSP 1 Score: 261 bits (667), Expect = 5.280e-83
Identity = 119/223 (53.36%), Postives = 158/223 (70.85%), Query Frame = 2
Query:  113 RERDLNFWMNAGIIGLVGLAVTLKIATVNLEVSRGWTVWEALLRIPQDNWDAYLETLRSNPIVVKAVTSCSVYSLGDGTAQMYEGRSLAELDRGRLLRSAVAGLMGHGPLSHYWYEVCERIFDVIGWNGFWWTVAPKIAVDQLCWGPIWNGVYVFLIGLLKGDDISKVWETVQSTSLPLLLSGLKLWPLAHVITYGLVPTENRLLWVDTVEILWVTILSKQAA 781
            R  D+N  +N G+I LV L V  ++ TV+ ++ RGWT  E+L RI  DNW  Y E L + P+  KA+TS +VY++GD  AQ  EG S+ ELDR R LRS +AGL+GHGPLSH WY+V E +F  + WN  WW   PK+ VDQL WGP WN +Y+ L+G++K +    +W  ++ T++PL++SGLKLWPLAH +TYGL+P ENRLLWVD VEI WVTIL+ QA+
Sbjct:  102 RSVDINETINTGLIVLVALGVLARVGTVDQDMMRGWTAAESLTRISLDNWADYSEILNAAPLQTKAITSATVYAIGDIIAQRTEGVSMGELDRPRTLRSLLAGLIGHGPLSHVWYDVSEELFTALHWNE-WWGFFPKVMVDQLTWGPFWNNMYIVLLGIMKMESWETMWGDIKRTTVPLIVSGLKLWPLAHCVTYGLIPVENRLLWVDVVEIAWVTILASQAS 323          
BLAST of mRNA_P-wetherbeei_contig1474.3.1 vs. uniprot
Match: B7G9T7_PHATC (Predicted protein (Fragment) n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G9T7_PHATC)

HSP 1 Score: 256 bits (655), Expect = 7.170e-83
Identity = 116/217 (53.46%), Postives = 158/217 (72.81%), Query Frame = 2
Query:  137 MNAG-IIGLVGLAVTLKIATVNLEVSRGWTVWEALLRIPQDNWDAYLETLRSNPIVVKAVTSCSVYSLGDGTAQMYEGRSLAELDRGRLLRSAVAGLMGHGPLSHYWYEVCERIFD-VIGWNGFWWTVAPKIAVDQLCWGPIWNGVYVFLIGLLKGDDISKVWETVQSTSLPLLLSGLKLWPLAHVITYGLVPTENRLLWVDTVEILWVTILSKQAA 781
            +N G I+G+VG+ +  +I T++  +SRGWT  E   RIP D W  Y + L ++P+  KA TS +VY++GD  AQ  +G ++ +LDRGR++RS +AGL+GHGPLSH+WY VC+  FD V+ W   WW+  PK+ VDQ  WGPIWN  Y+ L+GL+K + +  +W  ++ T++PL+LSGLKLWPLAH +TYGLVP ENRLLWVD VEILWVTIL+  AA
Sbjct:    2 INTGFIVGVVGVLL-YEITTMDATISRGWTSEELAARIPMDVWAGYSQVLENSPVATKAATSATVYTIGDFIAQRTQGAAMGDLDRGRIVRSMLAGLIGHGPLSHFWYNVCDHFFDNVLHWTA-WWSFFPKVVVDQTTWGPIWNNTYILLLGLMKLEKLETIWSDMKRTTVPLILSGLKLWPLAHCVTYGLVPVENRLLWVDAVEILWVTILATTAA 216          
BLAST of mRNA_P-wetherbeei_contig1474.3.1 vs. uniprot
Match: A0A6V2I5L6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2I5L6_9STRA)

HSP 1 Score: 258 bits (660), Expect = 4.860e-82
Identity = 113/221 (51.13%), Postives = 158/221 (71.49%), Query Frame = 2
Query:  119 RDLNFWMNAGIIGLVGLAVTLKIATVNLEVSRGWTVWEALLRIPQDNWDAYLETLRSNPIVVKAVTSCSVYSLGDGTAQMYEGRSLAELDRGRLLRSAVAGLMGHGPLSHYWYEVCERIFDVIGWNGFWWTVAPKIAVDQLCWGPIWNGVYVFLIGLLKGDDISKVWETVQSTSLPLLLSGLKLWPLAHVITYGLVPTENRLLWVDTVEILWVTILSKQAA 781
            +D+N ++N  ++  V  A+  K+ +V+  ++RGWT  E   RIP DNW  Y  TL ++PI  KA+TS SVY++GD  AQ  EG  + ELDR R++RS +AGL+GHGP+SH+WYE  E  FD +     WW+  PK+A+DQ  WGP+WN  Y+ L+GL+K D   ++W  ++ T++PL++SGLKLWPLAH +TYGL+P ENRLLWVD VEI+WVTIL+ QA+
Sbjct:   95 KDINGFINTAVVVAVLTALVFKVTSVDAGLTRGWTPEEIATRIPIDNWIGYSSTLHNSPISTKAITSASVYTIGDVIAQKTEGAGMGELDRPRIIRSLLAGLIGHGPMSHFWYEYSEDFFDNVLHLTEWWSFFPKVAIDQATWGPLWNNTYILLLGLMKLDSWERIWGDMKRTTIPLIVSGLKLWPLAHCVTYGLIPVENRLLWVDLVEIIWVTILANQAS 315          
BLAST of mRNA_P-wetherbeei_contig1474.3.1 vs. uniprot
Match: A0A7S2HYH1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYH1_9STRA)

HSP 1 Score: 255 bits (651), Expect = 1.040e-80
Identity = 115/222 (51.80%), Postives = 157/222 (70.72%), Query Frame = 2
Query:  119 RDLNFWMNAGIIGLVGLAVTLKIATVNLEVSRGWTVWEALLRIPQDNWDAYLETLRSNPIVVKAVTSCSVYSLGDGTAQMYEGRSLAELDRGRLLRSAVAGLMGHGPLSHYWYEVCERIFD-VIGWNGFWWTVAPKIAVDQLCWGPIWNGVYVFLIGLLKGDDISKVWETVQSTSLPLLLSGLKLWPLAHVITYGLVPTENRLLWVDTVEILWVTILSKQAA 781
            +D+N ++N  ++  V +A+  K+A+V+  ++RGWT  E   RIP DNW +Y   L   PI  KA+TS SVY++GD  AQ  EG S+ +LDR R+LRS +AGL+GHGPLSH+WY+  E  FD V+ W   WW+  PK+ +DQ  WGP WN  Y+ L+G +K D    +W  ++ T++PL++SGLKLWPLAH +TYGLVP ENRLLWVD VEI+WVTIL+ QA+
Sbjct:   96 KDINSFINTAVVIAVLVALLSKVASVDAGLTRGWTPEEVAARIPMDNWSSYSAVLEDAPISTKAITSASVYTIGDVIAQRTEGNSMGDLDRPRILRSLLAGLIGHGPLSHFWYDYSEAFFDDVLKWTE-WWSFFPKVILDQTTWGPFWNNTYIILLGAMKLDKWENIWGDIKRTTIPLVVSGLKLWPLAHCVTYGLVPVENRLLWVDLVEIVWVTILATQAS 316          
BLAST of mRNA_P-wetherbeei_contig1474.3.1 vs. uniprot
Match: A0A7S2PLY5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PLY5_9STRA)

HSP 1 Score: 252 bits (644), Expect = 7.060e-80
Identity = 120/262 (45.80%), Postives = 173/262 (66.03%), Query Frame = 2
Query:    5 PTSMSGIALGSDVSEAVVVEMASNDVEEAEHQSRLQRER--DLNFWMNAGIIGLVGLAVTLKIATVNLEVSRGWTVWEALLRIPQDNWDAYLETLRSNPIVVKAVTSCSVYSLGDGTAQMYEGRSLAELDRGRLLRSAVAGLMGHGPLSHYWYEVCERIF-DVIGWNGFWWTVAPKIAVDQLCWGPIWNGVYVFLIGLLKGDDISKVWETVQSTSLPLLLSGLKLWPLAHVITYGLVPTENRLLWVDTVEILWVTILSKQAA 781
            P SM+ +++     +    E+ +      E Q ++Q+    D N ++N G+I +V +    K+ATV++ + RGWT  E  +RIP DNW +Y   L + PI  KAVTS +VY++GD  AQ  EG+S  +LDR R+LRS +AG +GHGPLSH WY+  E +F +   W   WW+  PK+A+DQ+ WGP WN  Y+ L+G+++   +  +W  ++ T++PL++SGLKLWPLAH +TYGLVP ENRLLWVD VEI+WVTIL+  AA
Sbjct:   45 PKSMTQLSMSEKAVDVDAFELDNVSTTNNEMQQQMQQVSVVDYNAYINIGVIAIVTVLALSKLATVDMGMMRGWTAAEMAVRIPVDNWASYESILHAAPISTKAVTSATVYTIGDIIAQRTEGKSYGDLDRWRVLRSLLAGCIGHGPLSHVWYDWSEDVFTEQFHWTE-WWSFFPKVAIDQMTWGPFWNNTYILLLGIMQFRPLKDIWTEIKETTVPLIVSGLKLWPLAHCVTYGLVPVENRLLWVDLVEIVWVTILASAAA 305          
BLAST of mRNA_P-wetherbeei_contig1474.3.1 vs. uniprot
Match: A0A7S2LHE2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LHE2_9STRA)

HSP 1 Score: 246 bits (629), Expect = 1.940e-77
Identity = 111/221 (50.23%), Postives = 154/221 (69.68%), Query Frame = 2
Query:  122 DLNFWMNAGIIGLVGLAVTLKIATVNLEVSRGWTVWEALLRIPQDNWDAYLETLRSNPIVVKAVTSCSVYSLGDGTAQMYEGRSLAELDRGRLLRSAVAGLMGHGPLSHYWYEVCERIFD-VIGWNGFWWTVAPKIAVDQLCWGPIWNGVYVFLIGLLKGDDISKVWETVQSTSLPLLLSGLKLWPLAHVITYGLVPTENRLLWVDTVEILWVTILSKQAA 781
            D N  +N  I  +  + V  ++ +VN+ + RGW+  E   R+P DNW++Y   L + PI  K++TS +VY++GD  AQ  EG  + ELDRGR+ RS  AGL+GHGPLSH+WY++ E  F+ V+ W   WW+  PK+ +DQ  WGP WN  Y+ L+G+++    S+VW  ++ T++PL++SGLKLWPLAH ITYGLVP ENRLLWVD VEI+WVTIL+ QAA
Sbjct:  102 DKNTIINTSIFAIALVTVVFQVLSVNVGIIRGWSTEEIAYRVPLDNWNSYNAILAAAPIQTKSITSATVYAIGDTIAQRTEGTEIGELDRGRIGRSLAAGLIGHGPLSHFWYQISEDFFNNVLMWTD-WWSFIPKVVIDQTLWGPFWNNSYIVLLGVMQFQKPSQVWADIKRTTIPLVVSGLKLWPLAHCITYGLVPVENRLLWVDMVEIVWVTILATQAA 321          
BLAST of mRNA_P-wetherbeei_contig1474.3.1 vs. uniprot
Match: A0A448Z6W8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6W8_9STRA)

HSP 1 Score: 239 bits (610), Expect = 3.480e-75
Identity = 110/225 (48.89%), Postives = 152/225 (67.56%), Query Frame = 2
Query:  122 DLNFWMNAGIIGLVGLAVTLKIATVNLEVSRGWTVWEALLRIPQDNWDAYLETLRSNPIVVKAVTSCSVYSLGDGTAQMYEGRSLAELDRGRLLRSAVAGLMGHGPLSHYWYEVCERIF-DVIGWNGFWWTVAPKIAVDQLCWGPIWNGVYVFLIGLLKGD---DISKVWETVQSTSLPLLLSGLKLWPLAHVITYGLVPTENRLLWVDTVEILWVTILSKQAAA 784
            D N  +N G++    L    ++ATV++ + RGW++ E  LRIP DNW++Y   L   PI  KA TS +VY++GD  AQ  EGR++ ELDR RL RS +AGL+GHGP+SH+WYE  E +F +++     +W  A KI +DQ  WGP WN  Y+ ++G++K         +W  ++ T++PL++SGLKLWPLAH +TYGL+P ENRLLWVD VEI WVTIL+  AAA
Sbjct:   51 DANAILNTGVVVAFALLSLNQMATVDVGMMRGWSLEEIALRIPLDNWNSYSAVLSKAPIPTKAATSATVYAIGDFIAQRAEGRTMGELDRPRLARSLLAGLLGHGPMSHFWYEASENVFQNILHLPSNFWGTAAKIGIDQTIWGPFWNNTYILMLGVMKNGRETSFESIWAEMKRTTIPLIVSGLKLWPLAHCVTYGLIPVENRLLWVDLVEIXWVTILATTAAA 275          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1474.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C8Z2_9STRA3.080e-10361.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KX44_9PHAE2.540e-9557.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TQH1_9STRA4.510e-9560.63Peroxisomal membrane 22 kDa (Mpv17 pmp22) family p... [more]
A0A7S1VV68_9STRA5.280e-8353.36Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
B7G9T7_PHATC7.170e-8353.46Predicted protein (Fragment) n=3 Tax=Phaeodactylum... [more]
A0A6V2I5L6_9STRA4.860e-8251.13Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2HYH1_9STRA1.040e-8051.80Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2PLY5_9STRA7.060e-8045.80Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2LHE2_9STRA1.940e-7750.23Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A448Z6W8_9STRA3.480e-7548.89Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1474contigP-wetherbeei_contig1474:3361..5581 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G2C4
PFAMsMpv17_PMP22
Model size784
Max annot lvl2759|Eukaryota
KEGG koko:K13348
KEGG Pathwayko04146,map04146
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005777,GO:0005778,GO:0005779,GO:0016020,GO:0016021,GO:0031090,GO:0031224,GO:0031231,GO:0031300,GO:0031301,GO:0031903,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0098588,GO:0098805
Exons6
Evalue8.02e-96
EggNOG OGsKOG1944@1|root,KOG1944@2759|Eukaryota
Ec32 ortholog descriptionMpv17/PMP22
Ec32 orthologEc-16_001670.1
DescriptionBelongs to the peroxisomal membrane protein PXMP2 4 family
Cds size771
COG categoryC
BRITEko00000,ko00001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1474.3.1prot_P-wetherbeei_contig1474.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1474 3374..5581 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186032.175946-UTR-P-wetherbeei_contig1474:3360..33731683186032.175946-UTR-P-wetherbeei_contig1474:3360..3373Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1474 3361..3373 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186032.1849835-CDS-P-wetherbeei_contig1474:3373..34651683186032.1849835-CDS-P-wetherbeei_contig1474:3373..3465Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1474 3374..3465 +
1683186032.1923082-CDS-P-wetherbeei_contig1474:3699..37991683186032.1923082-CDS-P-wetherbeei_contig1474:3699..3799Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1474 3700..3799 +
1683186032.1994114-CDS-P-wetherbeei_contig1474:4112..42321683186032.1994114-CDS-P-wetherbeei_contig1474:4112..4232Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1474 4113..4232 +
1683186032.206877-CDS-P-wetherbeei_contig1474:4574..48621683186032.206877-CDS-P-wetherbeei_contig1474:4574..4862Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1474 4575..4862 +
1683186032.2142782-CDS-P-wetherbeei_contig1474:5145..52771683186032.2142782-CDS-P-wetherbeei_contig1474:5145..5277Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1474 5146..5277 +
1683186032.2218344-CDS-P-wetherbeei_contig1474:5542..55811683186032.2218344-CDS-P-wetherbeei_contig1474:5542..5581Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1474 5543..5581 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1474.3.1

>prot_P-wetherbeei_contig1474.3.1 ID=prot_P-wetherbeei_contig1474.3.1|Name=mRNA_P-wetherbeei_contig1474.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=257bp
MSGIALGSDVSEAVVVEMASNDVEEAEHQSRLQRERDLNFWMNAGIIGLV
GLAVTLKIATVNLEVSRGWTVWEALLRIPQDNWDAYLETLRSNPIVVKAV
TSCSVYSLGDGTAQMYEGRSLAELDRGRLLRSAVAGLMGHGPLSHYWYEV
CERIFDVIGWNGFWWTVAPKIAVDQLCWGPIWNGVYVFLIGLLKGDDISK
VWETVQSTSLPLLLSGLKLWPLAHVITYGLVPTENRLLWVDTVEILWVTI
LSKQAAA
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mRNA from alignment at P-wetherbeei_contig1474:3361..5581+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1474.3.1 ID=mRNA_P-wetherbeei_contig1474.3.1|Name=mRNA_P-wetherbeei_contig1474.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2221bp|location=Sequence derived from alignment at P-wetherbeei_contig1474:3361..5581+ (Phaeothamnion wetherbeei SAG_119_79)
CGATCCAACGAGCATGTCAGGGATAGCTTTAGGGAGCGATGTTTCCGAAG CTGTTGTGGTGGAGATGGCTTCTAACGACGTCGAAGAAGCGGAGCACCAA TCGAGGTGAGAGATCTGTTGTTGTGCTCATTGTTGTCCACTTAGCAGCCG CCTTTCCTTCCTTAGTACAGAAGATGCTCATCAACTATTTTGGCACCAGT CCGGGGCAATCATTGTCCTTGCGAGCATAGTGCACCTGGTCGACGCGTAT TCCGCTCCTTTGCTTTTTTGTGTATGAATTCAGAATGCGGCAGCTCGATG ATCTCCATCAAAATCCCTACCATCCGTCCGCCCATTCAGGCTGCAACGGG AACGAGATTTAAATTTTTGGATGAACGCCGGGATTATTGGCCTCGTCGGG CTGGCGGTTACCTTGAAAATTGCCACAGTGAACCTCGAGGTAAGTGGGGG AAACGGGAGTCCTTCTCCTTCCTAGCACCTTGCTCCTGCTAGAGTTTTAA AAAACGGCCTAAAAAACGGTAATGGCCTCGTCGAGAGTTTGTGCACAATT CCTGTTGGTTTGTTTCAACGAAGGATTCCATTCCGAATAGAGTCAACCTC CGCAGTACTCTGGTTTTTTCCCGTTACTGCGCGGGACCGGTGGCTGATTG AGTGCCGATGAGGGGTTTTCTCAGTTCTTTCTTCCGTGGCATGCCCCGCT GCTCCTCCATTTTTTTGGTGCTTTGTCTGTTGATGGGGGATGGGAATTAT AGGTCAGCCGCGGATGGACGGTGTGGGAGGCATTGCTGCGCATCCCGCAG GACAATTGGGATGCCTATCTCGAAACATTGCGCTCCAATCCCATCGTCGT CAAGGCGGTCACTTCCTGCAGCGTAAGTGGGTCTGTTCGGAACGACACCT TTATACTTTGTACGGTTTTGCGTCCCACCGTTAGTTGTCGTTAGCTACTG TTGCTTAGCTGCCATTAGCTACCGTCAGTTGCGATTAGCTACCTTTAGTT ACCGTTAGTTGTCGTTGGTTGCCCTTGCAGCATCCCATTAAGCTATTCCC GGCACACGCTGCGAATCATGCACTCGATCGCTTCTTACGTTTCTAGCCGC CAAGCAAGTAACCAACAAAAAAAGGGCGTCACCCCGTGTGCTGTCTTGGT GTGCCTTTATTACTCCCTTCCTCGAATTGCCTCATCGTGCCTCGTCTCGC TGTCGCTGCCTCAGGTATACTCGTTGGGGGACGGGACAGCCCAGATGTAC GAGGGCCGCAGCCTAGCGGAGCTGGACCGCGGCCGCTTGTTGCGCTCGGC CGTGGCTGGGCTCATGGGCCATGGACCGCTTAGTCACTACTGGTATGAGG TCTGCGAGCGCATCTTCGATGTGATCGGCTGGAACGGCTTTTGGTGGACC GTCGCTCCGAAGATCGCGGTCGATCAACTGTGCTGGGGGCCGATTTGGAA TGGTGTATATGTGTTCCTCATCGGGCTCCTGAAGGGCGACGACATTTCCA AGGTGTGTTTTTTCACTGCAGAGACAGCGTCGTCTCCAGCTGCAACATCC CTTAGCTTGCGTGCAGGTCGCTGTGCTTTTGCCTGTCTGTTTTTGTTAAA ATCTTCGAAAGTGCTGCGAACCTGATCGTCTGTTGTCGATCAGGTTTTAC CATCACGCATTTTGTAAAATAAAGCCTCCGGCTCCTCTTTGCTCTCCGGT TGGATGATGCACGGCACGTGCCCCTGGCTTTATTCCGACGGGGGCCTTCG CTTCGCTTTGCGTAACACTATCTACGTCTGCAAAGGTGTGGGAGACGGTG CAGTCGACGAGCCTCCCATTGCTGCTGTCGGGGCTCAAGCTGTGGCCACT GGCGCACGTCATCACCTACGGCCTCGTTCCCACGGAGAATCGATTGTTAT GGGTTGATACAGTCGAGGTACGGCAGATTGTTACACGTAAATTATTGGTT GCTATGGTTGCCGCATTGTTTGCCACGGTTTCTTAAAAAAGAGTTTGAAG AAAAGGCATTCCCAACCAGAGAGATTCACATCGGTTCCTGATGAAAAGAT GGGTTCAAATGCCATGCTGATTTTCACAGCTGCGCTTTCTTTCTGATCTC ACCAACGAATCATCTTCTCCCACTGGTTTTGCGCCCCTGCCCTGGAAACC ACCGCCGTACGCTGCCACTTCCGCTACGGAAGATCCTGTGGGTAACAATT TTGAGCAAGCAAGCTGCTGCA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1474:3361..5581+

>mRNA_P-wetherbeei_contig1474.3.1 ID=mRNA_P-wetherbeei_contig1474.3.1|Name=mRNA_P-wetherbeei_contig1474.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=771bp|location=Sequence derived from alignment at P-wetherbeei_contig1474:3361..5581+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCAGGGATAGCTTTAGGGAGCGATGTTTCCGAAGCTGTTGTGGTGGA
GATGGCTTCTAACGACGTCGAAGAAGCGGAGCACCAATCGAGGCTGCAAC
GGGAACGAGATTTAAATTTTTGGATGAACGCCGGGATTATTGGCCTCGTC
GGGCTGGCGGTTACCTTGAAAATTGCCACAGTGAACCTCGAGGTCAGCCG
CGGATGGACGGTGTGGGAGGCATTGCTGCGCATCCCGCAGGACAATTGGG
ATGCCTATCTCGAAACATTGCGCTCCAATCCCATCGTCGTCAAGGCGGTC
ACTTCCTGCAGCGTATACTCGTTGGGGGACGGGACAGCCCAGATGTACGA
GGGCCGCAGCCTAGCGGAGCTGGACCGCGGCCGCTTGTTGCGCTCGGCCG
TGGCTGGGCTCATGGGCCATGGACCGCTTAGTCACTACTGGTATGAGGTC
TGCGAGCGCATCTTCGATGTGATCGGCTGGAACGGCTTTTGGTGGACCGT
CGCTCCGAAGATCGCGGTCGATCAACTGTGCTGGGGGCCGATTTGGAATG
GTGTATATGTGTTCCTCATCGGGCTCCTGAAGGGCGACGACATTTCCAAG
GTGTGGGAGACGGTGCAGTCGACGAGCCTCCCATTGCTGCTGTCGGGGCT
CAAGCTGTGGCCACTGGCGCACGTCATCACCTACGGCCTCGTTCCCACGG
AGAATCGATTGTTATGGGTTGATACAGTCGAGATCCTGTGGGTAACAATT
TTGAGCAAGCAAGCTGCTGCA
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