mRNA_P-wetherbeei_contig1474.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1474.3.1 vs. uniprot
Match: A0A836C8Z2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Z2_9STRA) HSP 1 Score: 311 bits (798), Expect = 3.080e-103 Identity = 140/228 (61.40%), Postives = 176/228 (77.19%), Query Frame = 2
Query: 98 QSRLQRERDLNFWMNAGIIGLVGLAVTLKIATVNLEVSRGWTVWEALLRIPQDNWDAYLETLRSNPIVVKAVTSCSVYSLGDGTAQMYEGRSLAELDRGRLLRSAVAGLMGHGPLSHYWYEVCERIFDVIGWNGFWWTVAPKIAVDQLCWGPIWNGVYVFLIGLLKGDDISKVWETVQSTSLPLLLSGLKLWPLAHVITYGLVPTENRLLWVDTVEILWVTILSKQAA 781
+S ++ +R++NF +N+G + V + V +++A+ L+ SRGWT E LLR+PQDNW Y++ LRS+P++VKAVTS +VY+LGD TAQ G LAELDR R+ RSA AG +GHGPLSH WYEVCE +F IGWNG WW PKI DQL WGPIWN YV L+GL+K D ++VWE V ST +PL++SGLKLWP H++TYGL+P ENRLLWVDTVEILWVTILSKQAA
Sbjct: 50 KSEMEEDREVNFLVNSGFLIAVIVTVAVRLASSTLDASRGWTAEEVLLRLPQDNWQGYMDMLRSHPVLVKAVTSGTVYALGDWTAQTTNGTPLAELDRWRVARSAAAGFVGHGPLSHCWYEVCEALFSAIGWNGAWWVTLPKIMTDQLVWGPIWNATYVVLVGLMKRDAPARVWEAVTSTMVPLVVSGLKLWPAVHLVTYGLIPPENRLLWVDTVEILWVTILSKQAA 277
BLAST of mRNA_P-wetherbeei_contig1474.3.1 vs. uniprot
Match: A0A6H5KX44_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX44_9PHAE) HSP 1 Score: 292 bits (748), Expect = 2.540e-95 Identity = 131/228 (57.46%), Postives = 168/228 (73.68%), Query Frame = 2
Query: 98 QSRLQRERDLNFWMNAGIIGLVGLAVTLKIATVNLEVSRGWTVWEALLRIPQDNWDAYLETLRSNPIVVKAVTSCSVYSLGDGTAQMYEGRSLAELDRGRLLRSAVAGLMGHGPLSHYWYEVCERIFDVIGWNGFWWTVAPKIAVDQLCWGPIWNGVYVFLIGLLKGDDISKVWETVQSTSLPLLLSGLKLWPLAHVITYGLVPTENRLLWVDTVEILWVTILSKQAA 781
++R + + LN + NAG + V L + VN EVSRGWT+ E +LR+P DNWD Y E LR +P+ VKA TS VY+LGD AQ EG LAE++R R++RSA+AGL+ HGPLSH WY VCE +FD++GWN +WW APKI DQL WGP WN VY+ +G+L D + +WE + ST+LPL+++G++LWPLAHV+TYGLVP ENRLLWVD VEI+WVTILS QAA
Sbjct: 103 KNREEENKKLNLFANAGFLAGVALFTIAVVFGVNSEVSRGWTIGEYILRVPLDNWDGYSEMLRQSPVQVKACTSGIVYALGDLVAQSMEGTELAEIERQRVVRSAMAGLLLHGPLSHVWYNVCEGLFDIVGWNEYWWVPAPKIITDQLLWGPAWNAVYIAFLGVLNKDSSAVIWEAITSTALPLVIAGIRLWPLAHVVTYGLVPKENRLLWVDAVEIVWVTILSSQAA 330
BLAST of mRNA_P-wetherbeei_contig1474.3.1 vs. uniprot
Match: W7TQH1_9STRA (Peroxisomal membrane 22 kDa (Mpv17 pmp22) family protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQH1_9STRA) HSP 1 Score: 295 bits (754), Expect = 4.510e-95 Identity = 134/221 (60.63%), Postives = 166/221 (75.11%), Query Frame = 2
Query: 119 RDLNFWMNAGIIGLVGLAVTLKIATVNLEVSRGWTVWEALLRIPQDNWDAYLETLRSNPIVVKAVTSCSVYSLGDGTAQMYEGRSLAELDRGRLLRSAVAGLMGHGPLSHYWYEVCERIFDVIGWNGFWWTVAPKIAVDQLCWGPIWNGVYVFLIGLLKGDDISKVWETVQSTSLPLLLSGLKLWPLAHVITYGLVPTENRLLWVDTVEILWVTILSKQAA 781
R LNF +N G+I V V K+ TV+L+V RGWT E RIP DNWD Y+ L +P+ VKAVTS SVY+LGDG AQ+YEG++L E+DRGR+ RS +AG +GHGPLSH+WY V E F +GW G WWT PKI VDQL W PIWNG Y+FL+G +K + + ++ TV+STS L+ SGLKLWPLAHV+TYG++P ENRLLWVD VEILWVTILS++AA
Sbjct: 121 RQLNFLLNVGLISAVAALVLAKVVTVDLDVWRGWTPAEIFTRIPLDNWDGYMNVLSLHPVFVKAVTSGSVYTLGDGVAQLYEGKTLGEIDRGRVARSGIAGFVGHGPLSHWWYGVSEDFFGWLGWEG-WWTTFPKITVDQLVWSPIWNGCYIFLLGAMKREALGEIVNTVKSTSFSLITSGLKLWPLAHVVTYGVIPVENRLLWVDLVEILWVTILSREAA 340
BLAST of mRNA_P-wetherbeei_contig1474.3.1 vs. uniprot
Match: A0A7S1VV68_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VV68_9STRA) HSP 1 Score: 261 bits (667), Expect = 5.280e-83 Identity = 119/223 (53.36%), Postives = 158/223 (70.85%), Query Frame = 2
Query: 113 RERDLNFWMNAGIIGLVGLAVTLKIATVNLEVSRGWTVWEALLRIPQDNWDAYLETLRSNPIVVKAVTSCSVYSLGDGTAQMYEGRSLAELDRGRLLRSAVAGLMGHGPLSHYWYEVCERIFDVIGWNGFWWTVAPKIAVDQLCWGPIWNGVYVFLIGLLKGDDISKVWETVQSTSLPLLLSGLKLWPLAHVITYGLVPTENRLLWVDTVEILWVTILSKQAA 781
R D+N +N G+I LV L V ++ TV+ ++ RGWT E+L RI DNW Y E L + P+ KA+TS +VY++GD AQ EG S+ ELDR R LRS +AGL+GHGPLSH WY+V E +F + WN WW PK+ VDQL WGP WN +Y+ L+G++K + +W ++ T++PL++SGLKLWPLAH +TYGL+P ENRLLWVD VEI WVTIL+ QA+
Sbjct: 102 RSVDINETINTGLIVLVALGVLARVGTVDQDMMRGWTAAESLTRISLDNWADYSEILNAAPLQTKAITSATVYAIGDIIAQRTEGVSMGELDRPRTLRSLLAGLIGHGPLSHVWYDVSEELFTALHWNE-WWGFFPKVMVDQLTWGPFWNNMYIVLLGIMKMESWETMWGDIKRTTVPLIVSGLKLWPLAHCVTYGLIPVENRLLWVDVVEIAWVTILASQAS 323
BLAST of mRNA_P-wetherbeei_contig1474.3.1 vs. uniprot
Match: B7G9T7_PHATC (Predicted protein (Fragment) n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G9T7_PHATC) HSP 1 Score: 256 bits (655), Expect = 7.170e-83 Identity = 116/217 (53.46%), Postives = 158/217 (72.81%), Query Frame = 2
Query: 137 MNAG-IIGLVGLAVTLKIATVNLEVSRGWTVWEALLRIPQDNWDAYLETLRSNPIVVKAVTSCSVYSLGDGTAQMYEGRSLAELDRGRLLRSAVAGLMGHGPLSHYWYEVCERIFD-VIGWNGFWWTVAPKIAVDQLCWGPIWNGVYVFLIGLLKGDDISKVWETVQSTSLPLLLSGLKLWPLAHVITYGLVPTENRLLWVDTVEILWVTILSKQAA 781
+N G I+G+VG+ + +I T++ +SRGWT E RIP D W Y + L ++P+ KA TS +VY++GD AQ +G ++ +LDRGR++RS +AGL+GHGPLSH+WY VC+ FD V+ W WW+ PK+ VDQ WGPIWN Y+ L+GL+K + + +W ++ T++PL+LSGLKLWPLAH +TYGLVP ENRLLWVD VEILWVTIL+ AA
Sbjct: 2 INTGFIVGVVGVLL-YEITTMDATISRGWTSEELAARIPMDVWAGYSQVLENSPVATKAATSATVYTIGDFIAQRTQGAAMGDLDRGRIVRSMLAGLIGHGPLSHFWYNVCDHFFDNVLHWTA-WWSFFPKVVVDQTTWGPIWNNTYILLLGLMKLEKLETIWSDMKRTTVPLILSGLKLWPLAHCVTYGLVPVENRLLWVDAVEILWVTILATTAA 216
BLAST of mRNA_P-wetherbeei_contig1474.3.1 vs. uniprot
Match: A0A6V2I5L6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2I5L6_9STRA) HSP 1 Score: 258 bits (660), Expect = 4.860e-82 Identity = 113/221 (51.13%), Postives = 158/221 (71.49%), Query Frame = 2
Query: 119 RDLNFWMNAGIIGLVGLAVTLKIATVNLEVSRGWTVWEALLRIPQDNWDAYLETLRSNPIVVKAVTSCSVYSLGDGTAQMYEGRSLAELDRGRLLRSAVAGLMGHGPLSHYWYEVCERIFDVIGWNGFWWTVAPKIAVDQLCWGPIWNGVYVFLIGLLKGDDISKVWETVQSTSLPLLLSGLKLWPLAHVITYGLVPTENRLLWVDTVEILWVTILSKQAA 781
+D+N ++N ++ V A+ K+ +V+ ++RGWT E RIP DNW Y TL ++PI KA+TS SVY++GD AQ EG + ELDR R++RS +AGL+GHGP+SH+WYE E FD + WW+ PK+A+DQ WGP+WN Y+ L+GL+K D ++W ++ T++PL++SGLKLWPLAH +TYGL+P ENRLLWVD VEI+WVTIL+ QA+
Sbjct: 95 KDINGFINTAVVVAVLTALVFKVTSVDAGLTRGWTPEEIATRIPIDNWIGYSSTLHNSPISTKAITSASVYTIGDVIAQKTEGAGMGELDRPRIIRSLLAGLIGHGPMSHFWYEYSEDFFDNVLHLTEWWSFFPKVAIDQATWGPLWNNTYILLLGLMKLDSWERIWGDMKRTTIPLIVSGLKLWPLAHCVTYGLIPVENRLLWVDLVEIIWVTILANQAS 315
BLAST of mRNA_P-wetherbeei_contig1474.3.1 vs. uniprot
Match: A0A7S2HYH1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYH1_9STRA) HSP 1 Score: 255 bits (651), Expect = 1.040e-80 Identity = 115/222 (51.80%), Postives = 157/222 (70.72%), Query Frame = 2
Query: 119 RDLNFWMNAGIIGLVGLAVTLKIATVNLEVSRGWTVWEALLRIPQDNWDAYLETLRSNPIVVKAVTSCSVYSLGDGTAQMYEGRSLAELDRGRLLRSAVAGLMGHGPLSHYWYEVCERIFD-VIGWNGFWWTVAPKIAVDQLCWGPIWNGVYVFLIGLLKGDDISKVWETVQSTSLPLLLSGLKLWPLAHVITYGLVPTENRLLWVDTVEILWVTILSKQAA 781
+D+N ++N ++ V +A+ K+A+V+ ++RGWT E RIP DNW +Y L PI KA+TS SVY++GD AQ EG S+ +LDR R+LRS +AGL+GHGPLSH+WY+ E FD V+ W WW+ PK+ +DQ WGP WN Y+ L+G +K D +W ++ T++PL++SGLKLWPLAH +TYGLVP ENRLLWVD VEI+WVTIL+ QA+
Sbjct: 96 KDINSFINTAVVIAVLVALLSKVASVDAGLTRGWTPEEVAARIPMDNWSSYSAVLEDAPISTKAITSASVYTIGDVIAQRTEGNSMGDLDRPRILRSLLAGLIGHGPLSHFWYDYSEAFFDDVLKWTE-WWSFFPKVILDQTTWGPFWNNTYIILLGAMKLDKWENIWGDIKRTTIPLVVSGLKLWPLAHCVTYGLVPVENRLLWVDLVEIVWVTILATQAS 316
BLAST of mRNA_P-wetherbeei_contig1474.3.1 vs. uniprot
Match: A0A7S2PLY5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PLY5_9STRA) HSP 1 Score: 252 bits (644), Expect = 7.060e-80 Identity = 120/262 (45.80%), Postives = 173/262 (66.03%), Query Frame = 2
Query: 5 PTSMSGIALGSDVSEAVVVEMASNDVEEAEHQSRLQRER--DLNFWMNAGIIGLVGLAVTLKIATVNLEVSRGWTVWEALLRIPQDNWDAYLETLRSNPIVVKAVTSCSVYSLGDGTAQMYEGRSLAELDRGRLLRSAVAGLMGHGPLSHYWYEVCERIF-DVIGWNGFWWTVAPKIAVDQLCWGPIWNGVYVFLIGLLKGDDISKVWETVQSTSLPLLLSGLKLWPLAHVITYGLVPTENRLLWVDTVEILWVTILSKQAA 781
P SM+ +++ + E+ + E Q ++Q+ D N ++N G+I +V + K+ATV++ + RGWT E +RIP DNW +Y L + PI KAVTS +VY++GD AQ EG+S +LDR R+LRS +AG +GHGPLSH WY+ E +F + W WW+ PK+A+DQ+ WGP WN Y+ L+G+++ + +W ++ T++PL++SGLKLWPLAH +TYGLVP ENRLLWVD VEI+WVTIL+ AA
Sbjct: 45 PKSMTQLSMSEKAVDVDAFELDNVSTTNNEMQQQMQQVSVVDYNAYINIGVIAIVTVLALSKLATVDMGMMRGWTAAEMAVRIPVDNWASYESILHAAPISTKAVTSATVYTIGDIIAQRTEGKSYGDLDRWRVLRSLLAGCIGHGPLSHVWYDWSEDVFTEQFHWTE-WWSFFPKVAIDQMTWGPFWNNTYILLLGIMQFRPLKDIWTEIKETTVPLIVSGLKLWPLAHCVTYGLVPVENRLLWVDLVEIVWVTILASAAA 305
BLAST of mRNA_P-wetherbeei_contig1474.3.1 vs. uniprot
Match: A0A7S2LHE2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LHE2_9STRA) HSP 1 Score: 246 bits (629), Expect = 1.940e-77 Identity = 111/221 (50.23%), Postives = 154/221 (69.68%), Query Frame = 2
Query: 122 DLNFWMNAGIIGLVGLAVTLKIATVNLEVSRGWTVWEALLRIPQDNWDAYLETLRSNPIVVKAVTSCSVYSLGDGTAQMYEGRSLAELDRGRLLRSAVAGLMGHGPLSHYWYEVCERIFD-VIGWNGFWWTVAPKIAVDQLCWGPIWNGVYVFLIGLLKGDDISKVWETVQSTSLPLLLSGLKLWPLAHVITYGLVPTENRLLWVDTVEILWVTILSKQAA 781
D N +N I + + V ++ +VN+ + RGW+ E R+P DNW++Y L + PI K++TS +VY++GD AQ EG + ELDRGR+ RS AGL+GHGPLSH+WY++ E F+ V+ W WW+ PK+ +DQ WGP WN Y+ L+G+++ S+VW ++ T++PL++SGLKLWPLAH ITYGLVP ENRLLWVD VEI+WVTIL+ QAA
Sbjct: 102 DKNTIINTSIFAIALVTVVFQVLSVNVGIIRGWSTEEIAYRVPLDNWNSYNAILAAAPIQTKSITSATVYAIGDTIAQRTEGTEIGELDRGRIGRSLAAGLIGHGPLSHFWYQISEDFFNNVLMWTD-WWSFIPKVVIDQTLWGPFWNNSYIVLLGVMQFQKPSQVWADIKRTTIPLVVSGLKLWPLAHCITYGLVPVENRLLWVDMVEIVWVTILATQAA 321
BLAST of mRNA_P-wetherbeei_contig1474.3.1 vs. uniprot
Match: A0A448Z6W8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6W8_9STRA) HSP 1 Score: 239 bits (610), Expect = 3.480e-75 Identity = 110/225 (48.89%), Postives = 152/225 (67.56%), Query Frame = 2
Query: 122 DLNFWMNAGIIGLVGLAVTLKIATVNLEVSRGWTVWEALLRIPQDNWDAYLETLRSNPIVVKAVTSCSVYSLGDGTAQMYEGRSLAELDRGRLLRSAVAGLMGHGPLSHYWYEVCERIF-DVIGWNGFWWTVAPKIAVDQLCWGPIWNGVYVFLIGLLKGD---DISKVWETVQSTSLPLLLSGLKLWPLAHVITYGLVPTENRLLWVDTVEILWVTILSKQAAA 784
D N +N G++ L ++ATV++ + RGW++ E LRIP DNW++Y L PI KA TS +VY++GD AQ EGR++ ELDR RL RS +AGL+GHGP+SH+WYE E +F +++ +W A KI +DQ WGP WN Y+ ++G++K +W ++ T++PL++SGLKLWPLAH +TYGL+P ENRLLWVD VEI WVTIL+ AAA
Sbjct: 51 DANAILNTGVVVAFALLSLNQMATVDVGMMRGWSLEEIALRIPLDNWNSYSAVLSKAPIPTKAATSATVYAIGDFIAQRAEGRTMGELDRPRLARSLLAGLLGHGPMSHFWYEASENVFQNILHLPSNFWGTAAKIGIDQTIWGPFWNNTYILMLGVMKNGRETSFESIWAEMKRTTIPLIVSGLKLWPLAHCVTYGLIPVENRLLWVDLVEIXWVTILATTAAA 275 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1474.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1474.3.1 >prot_P-wetherbeei_contig1474.3.1 ID=prot_P-wetherbeei_contig1474.3.1|Name=mRNA_P-wetherbeei_contig1474.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=257bp MSGIALGSDVSEAVVVEMASNDVEEAEHQSRLQRERDLNFWMNAGIIGLVback to top mRNA from alignment at P-wetherbeei_contig1474:3361..5581+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1474.3.1 ID=mRNA_P-wetherbeei_contig1474.3.1|Name=mRNA_P-wetherbeei_contig1474.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2221bp|location=Sequence derived from alignment at P-wetherbeei_contig1474:3361..5581+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1474:3361..5581+ >mRNA_P-wetherbeei_contig1474.3.1 ID=mRNA_P-wetherbeei_contig1474.3.1|Name=mRNA_P-wetherbeei_contig1474.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=771bp|location=Sequence derived from alignment at P-wetherbeei_contig1474:3361..5581+ (Phaeothamnion wetherbeei SAG_119_79)back to top |