mRNA_P-wetherbeei_contig14730.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14730.1.1
Unique NamemRNA_P-wetherbeei_contig14730.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14730.1.1 vs. uniprot
Match: A0A835Z1A8_9STRA (5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1A8_9STRA)

HSP 1 Score: 188 bits (477), Expect = 1.130e-51
Identity = 111/221 (50.23%), Postives = 133/221 (60.18%), Query Frame = 1
Query:   10 KTLGCGIVEARSVWRADPARMLPLLQAPTGVAKTMRSPRLRIQPSCSLQFMPVDAAAEVTLKVERPAVAGVLSFAVQKLGELGVLARASLAPDAAAAAPVMAEDAAAWDAFRASVRGSSDA-CCEAELARRLDALGKDPFTRSLPFEERTKLQLPGLPLLPTTTVGSFPQTAEVRRLRGQFKKGSLSESEYLQQMDLRIAHAIGVQEGLGLDVLVHGEASR 669
            KTLG G+++ARS WRADP  +LPLL+A    A       +RIQPS +LQF+PVDAA E  L   RPAVAG L+FA QKL E                                          C A   +R+ ALG   F R+LPFEER KLQLPGLPLLPTTT+GSFPQT EVRRLR Q KKG++ + +Y + +D  IA+AIGVQ+ LGLD+LVHGEA R
Sbjct:  295 KTLGAGVIDARSPWRADPDTILPLLRAIRSAAGPATP--IRIQPSANLQFVPVDAACEKGLHAARPAVAGALAFAAQKLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAAATEKRVAALGDGAFKRALPFEERVKLQLPGLPLLPTTTIGSFPQTPEVRRLRNQLKKGTIMQEQYDRAIDTHIAYAIGVQDALGLDILVHGEAER 513          
BLAST of mRNA_P-wetherbeei_contig14730.1.1 vs. uniprot
Match: A0A7S2US88_9STRA (5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2US88_9STRA)

HSP 1 Score: 163 bits (413), Expect = 3.270e-44
Identity = 97/221 (43.89%), Postives = 135/221 (61.09%), Query Frame = 1
Query:    1 PASKTLGCGIVEARSVWRADPARMLPLLQAPTGVAKTMRSPRLRIQPSCSLQFMPVDAAAEVTLKVERPAVAG-VLSFAVQKLGELGVLARASLAPDAAAAAPVMAEDAAAWDAFRASVRGSSDACCEAELARRLDALGKDPFTRSLPFEERTKLQLPGLPLLPTTTVGSFPQTAEVRRLRGQFKKGSLSESEYLQQMDLRIAHAIGVQEGLGLDVLVHGE 660
            P++K LG GI++ R+VW+ DPA    +L+       + ++  +RIQPS SLQF+P D + E  +       AG VLSF VQK+ E+ ++A+       A          AAW A+R ++       C+  +  R++AL +  F R  PFE R   QL G+PLLPTTT+GSFPQTA+VRRLR Q KK ++++ EY   MD +IAHAIG+QE LGLD+ VHGE
Sbjct:  283 PSNKILGAGIIDGRNVWKVDPAVAEVILEK-----LSTKTATIRIQPSASLQFIPWDLSCEKDILAHT---AGQVLSFTVQKISEISLVAKV------ATGTATFDAHKAAWAAYRTAL------ACDKSVTDRVNALTEKDFAREEPFEVRRPKQLKGVPLLPTTTIGSFPQTADVRRLRTQLKKKTITKEEYDAAMDTQIAHAIGIQEALGLDIFVHGE 483          
BLAST of mRNA_P-wetherbeei_contig14730.1.1 vs. uniprot
Match: A0A1P8SKH4_9STRA (5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (Fragment) n=1 Tax=Grammonema cf. islandica TaxID=216799 RepID=A0A1P8SKH4_9STRA)

HSP 1 Score: 163 bits (413), Expect = 4.800e-43
Identity = 103/224 (45.98%), Postives = 139/224 (62.05%), Query Frame = 1
Query:    1 PASKTLGCGIVEARSVWRADPARML-PLLQAPTGVAKTMRSPRLRIQPSCSLQFMPVDAAAEVTLKVERPAVAGVLSFAVQKLGELGVLARASLAPDAAAAAPVMAEDAAAWDAFRASVRGSSDACCEAELARRLDALGKDPFTRSLPFEERTKLQLPGLPLLPTTTVGSFPQTAEVRRLRGQFKKGSLSESEYLQQMDLRIAHAIGVQEGLGLDVLVHGEASR 669
            P SKTLG G+++ RSVWR  P   L P+L     +   M    +R+QPS SLQ++P D A E  + +  PA   VLSFA QKL E+ +LA+A      A     +   AA W+ + A+V+ +S +     +A RL  L +   TRS  F  R   QLP +PLLPTTT+GSFPQT  +R LR +FKKG LS+++Y + +D +IA +IG+QEGLGLD+LVHGEA R
Sbjct:  263 PKSKTLGAGLIDCRSVWRIHPKLTLNPILDR---LGAVMTGASIRVQPSGSLQYVPWDLACEKEI-LAHPA-GKVLSFATQKLSEVTMLAKACNGESKA-----LDTCAAVWNTYSAAVKAASTSI----VASRLQGLTEADLTRSEKFVVRRPKQLPNVPLLPTTTIGSFPQTKAIRSLRSKFKKGLLSKADYEKAIDQQIALSIGIQEGLGLDILVHGEAER 472          
BLAST of mRNA_P-wetherbeei_contig14730.1.1 vs. uniprot
Match: A0A0E3WIJ5_9BACL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=15 Tax=Paenibacillus TaxID=44249 RepID=A0A0E3WIJ5_9BACL)

HSP 1 Score: 161 bits (407), Expect = 4.690e-42
Identity = 116/226 (51.33%), Postives = 141/226 (62.39%), Query Frame = 1
Query:    1 PASKTLGCGIVEARSVWRADPARMLPLLQAPTGVAKTMRSPRLRIQPSCSLQFMPVDAAAEVTLKVERPAVAGVLSFAVQKLGELGVLARASLAPDAAAAAPVMAEDAAAWDAFRA-SVRGSSDACCEAELARRLDALGKDPFTRSLPFEERTKLQLPG--LPLLPTTTVGSFPQTAEVRRLRGQFKKGSLSESEYLQQMDLRIAHAIGVQEGLGLDVLVHGEASR 669
            PA K LG GI++ RS+WRADP   L L+Q    +A  +   RL +QPS SL  +PV   +E  LK   PAV   L+FA +KL ELG+LA A    ++ AAA  +AE   A  AFRA   RG  D    AE  RRLDAL   P +RSLPF ER KLQ     LPLLPTTT+GSFPQTAEVR+ R +++KG  +E  Y   +  +IA AI +QE LGLDVLVHGE  R
Sbjct:  282 PAGKLLGAGIIDGRSIWRADPDAKLGLIQK---LAAHVPLDRLILQPSSSLLHVPVTVQSEGKLK---PAVKQALAFADEKLAELGLLAAAXXXXNSNAAAQ-LAESREALAAFRALPERGRQDV---AEQVRRLDAL---PDSRSLPFAERVKLQQAKWKLPLLPTTTIGSFPQTAEVRQARLKWRKGVWNEERYDTFVRRQIAEAITLQEELGLDVLVHGEFER 494          
BLAST of mRNA_P-wetherbeei_contig14730.1.1 vs. uniprot
Match: B7G1X4_PHATC (5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G1X4_PHATC)

HSP 1 Score: 160 bits (404), Expect = 1.190e-41
Identity = 100/223 (44.84%), Postives = 137/223 (61.43%), Query Frame = 1
Query:    1 PASKTLGCGIVEARSVWRADPARMLPLLQAPTGVAKTMRSPRLRIQPSCSLQFMPVDAAAEVTLKVERPAVAGVLSFAVQKLGELGVLARASLAPDAAAAAPVMAEDAAAWDAFRASVRGSSDACCEAELARRLDALGKDPFTRSLPFEERTKLQLPGLPLLPTTTVGSFPQTAEVRRLRGQFKKGSLSESEYLQQMDLRIAHAIGVQEGLGLDVLVHGEASR 669
            P+SK LG G+V+AR+VW+ DP ++LPL    T   K++     R+QPS SLQ+ P D   E+ L    PA A VLSFA QKL EL +LA+A     +A     +    AAW  F ++  GS+          R+  L +  F R  P+++R   QL G+PLLPTTT+GSFPQT+E+RRLR ++KKG L+   Y + MD  IA+ IG+QE +G+D+LVHGE  R
Sbjct:  281 PSSKMLGAGLVDARNVWKVDPGKVLPL----TDKLKSLGI-EFRVQPSTSLQYTPWDLDREMQLD-NHPA-AQVLSFAKQKLDELVLLAQAISGEKSA-----LDTHTAAWTTFHSAHTGST------LTKERIKHLKETDFRRPEPYKQRRPKQLVGVPLLPTTTIGSFPQTSEIRRLRWEWKKGRLTNEAYERAMDQHIAYCIGIQEAIGIDILVHGEPER 485          
BLAST of mRNA_P-wetherbeei_contig14730.1.1 vs. uniprot
Match: A0A1Z5JFR1_FISSO (5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JFR1_FISSO)

HSP 1 Score: 160 bits (404), Expect = 1.240e-41
Identity = 100/225 (44.44%), Postives = 137/225 (60.89%), Query Frame = 1
Query:    4 ASKTLGCGIVEARSVWRADPARMLPLLQA--PTGVAKTMRSPRLRIQPSCSLQFMPVDAAAEVTLKVERPAVAGVLSFAVQKLGELGVLAR-ASLAPDAAAAAPVMAEDAAAWDAFRASVRGSSDACCEAELARRLDALGKDPFTRSLPFEERTKLQLPGLPLLPTTTVGSFPQTAEVRRLRGQFKKGSLSESEYLQQMDLRIAHAIGVQEGLGLDVLVHGEASR 669
            A+KT+GCG+V+AR+VW+ DPA  LP+L+     GV         RIQPS +LQF+P     E  L  E      VL+FA +KL E+  LA+ A    D   +  ++++  +AW +F  S + S  +     +  RL A+    F RS  + ER K QL GLP LPTTT+GSFPQT+ +RR+R  +KKG L+++EY   MD +IA+ IGVQE LGLD+LVHGE  R
Sbjct:  278 ATKTIGCGLVDARNVWKFDPATALPVLKCLVDKGVI-------FRIQPSSTLQFLPWTVEREDKLIAESHPALQVLAFAKEKLQEVARLAKVAGCLLDGEDSEHLLSDHESAWKSFVESRQTSQSS----SVRDRLQAVQPSDFRRSTDYLERRKQQLKGLPALPTTTIGSFPQTSAIRRVRAAWKKGLLNDAEYQAAMDQQIAYCIGVQETLGLDILVHGEPER 491          
BLAST of mRNA_P-wetherbeei_contig14730.1.1 vs. uniprot
Match: F2NP98_MARHT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) TaxID=869210 RepID=F2NP98_MARHT)

HSP 1 Score: 159 bits (402), Expect = 2.150e-41
Identity = 105/223 (47.09%), Postives = 134/223 (60.09%), Query Frame = 1
Query:    1 PASKTLGCGIVEARSVWRADPARMLPLLQAPTGVAKTMRSPRLRIQPSCSLQFMPVDAAAEVTLKVERPAVAGVLSFAVQKLGELGVLARASLAPDAAAAAPVMAEDAAAWDAFRASVRGSSDACCEAELARRLDALGKDPFTRSLPFEERTKLQLPGLPLLPTTTVGSFPQTAEVRRLRGQFKKGSLSESEYLQQMDLRIAHAIGVQEGLGLDVLVHGEASR 669
            P  K LG G+V+AR+VWR  P+ +L LL+   G+A     P L +QPS SLQF+P DA+ E  L     A+ GVLSFA QKL E+  LA+  L      A     E  AAW AFRA    +        + +RL  L    F R+LP+ ER   Q+    L PTTT+GSFPQ  EVRR+R +++KG +SE+EY   +D  IA+AIGVQEG+GLDVLVHGE  R
Sbjct:  273 PREKRLGAGVVDARNVWRIRPSEVLLLLERLHGIA-----PELSVQPSASLQFVPYDASRETGLP---EALRGVLSFAEQKLEEVVALAQ-HLGGQGGEAELARIE--AAWAAFRAFSPENPS------VRKRLQELTPQDFRRALPYAERRPKQIQ-TSLFPTTTIGSFPQIPEVRRVRARYRKGEISEAEYRAAIDAWIAYAIGVQEGVGLDVLVHGEFER 477          
BLAST of mRNA_P-wetherbeei_contig14730.1.1 vs. uniprot
Match: A0A6B3N7T7_9CYAN (5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase n=1 Tax=Symploca sp. SIO1C4 TaxID=2607765 RepID=A0A6B3N7T7_9CYAN)

HSP 1 Score: 157 bits (398), Expect = 8.490e-41
Identity = 103/225 (45.78%), Postives = 138/225 (61.33%), Query Frame = 1
Query:    1 PASKTLGCGIVEARSVWRADPARMLPLLQAPTGVAKTMRSPRLRIQPSCSLQFMPVDAAAEVTLKVERPAVAGVLSFAVQKLGELGVLARASLAPDAAAAAPVMAEDA--AAWDAFRASVRGSSDACCEAELARRLDALGKDPFTRSLPFEERTKLQLPGLPLLPTTTVGSFPQTAEVRRLRGQFKKGSLSESEYLQQMDLRIAHAIGVQEGLGLDVLVHGEASR 669
            P  K LG GIV+AR++W+    ++ PLL       +T+ S  L +QPS SLQF+P DA  E  L  +   +  VLSFA QKL E+  LAR + + D +     + ED   A W+AF         +  +  +  RL +L    F RSLP++ER K Q+  LP  PTTT+GSFPQT EVR+LR Q+KKG+L+ESEY Q +D  IA+ IG+QEG+G+DVLVHGE  R
Sbjct:  274 PQDKRLGVGIVDARNIWQIRTDKVFPLLSE----IQTVTS-NLSLQPSASLQFVPYDATREKQLPKQ---LRNVLSFAEQKLQEVRFLAR-TRSGDNSEIEQELTEDLIDANWEAFY------QFSPADRSVRNRLKSLTDKDFDRSLPYQERIKQQVQ-LPAFPTTTIGSFPQTPEVRKLRSQYKKGNLTESEYQQAIDAHIAYCIGLQEGMGMDVLVHGEFER 482          
BLAST of mRNA_P-wetherbeei_contig14730.1.1 vs. uniprot
Match: D8LTQ6_ECTSI (5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTQ6_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 3.370e-40
Identity = 101/233 (43.35%), Postives = 141/233 (60.52%), Query Frame = 1
Query:    1 PASKTLGCGIVEARSVWRADPARMLPLLQAPTGV---AKTMRSPRLRIQPSCSLQFMPVDAAAEVTLKVERPAVAG-VLSFAVQKLGELGVLARA----SLAPDAAAAAPVMAEDAAAWDAFRASVRGSSDACCEAELARRLDALGKDPFTRSLPFEERTKLQLPGL--PLLPTTTVGSFPQTAEVRRLRGQFKKGSLSESEYLQQMDLRIAHAIGVQEGLGLDVLVHGEASR 669
            P  K LG GI++ RS W  +PA+++ L++        A    S  +R+Q SC+LQF+P D   E  L  +   V G VL+FAVQK+ E+  LA A    +   +A    PV+ +   AW AF ASV  +++       A+RL  L +  F+R  PF+ER   Q   L  P+LPTTT+GSFPQTA VR+LR +FK G+LS  +Y + +D +I++AIG+QE LGLD+LVHGEA R
Sbjct:  292 PKDKVLGAGIIDGRSPWAMEPAKVVSLVREVASAIMPANPNGSDNIRVQASCNLQFVPWDVTCEGDLAEK---VGGDVLAFAVQKVQEIVALAEAVPKITAGKEAKDIFPVLDK---AWKAFSASVTDNTN------TAKRLAGLTEASFSRPAPFKERVAAQQKSLKLPVLPTTTIGSFPQTAAVRKLRREFKSGALSAEDYERAIDQQISYAIGIQEALGLDILVHGEAER 512          
BLAST of mRNA_P-wetherbeei_contig14730.1.1 vs. uniprot
Match: A0A1E7EZ86_9STRA (5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase n=2 Tax=Fragilariopsis cylindrus TaxID=186039 RepID=A0A1E7EZ86_9STRA)

HSP 1 Score: 155 bits (391), Expect = 7.530e-40
Identity = 95/225 (42.22%), Postives = 131/225 (58.22%), Query Frame = 1
Query:    1 PASKTLGCGIVEARSVWRADPARMLPLLQA--PTGVAKTMRSPRLRIQPSCSLQFMPVDAAAEVTLKVERPAVAGVLSFAVQKLGELGVLARASLAPDAAAAAPVMAEDAAAWDAFRASVRGSSDACCEAELARRLDALGKDPFTRSLPFEERTKLQLPGLPLLPTTTVGSFPQTAEVRRLRGQFKKGSLSESEYLQQMDLRIAHAIGVQEGLGLDVLVHGEASR 669
            P  KTLG GI++ARS W+ DP+++LPL++     GV+K     RL IQP  SLQF+P D        + +   + VLSF  QK+ EL  LA +            +A+   AW  +++S   +       E+ + +  L +  FTR   FE R   Q+P LP+LPTT++GSFPQTA +RRLR Q KKG++S+ EY   +D  I   IG+QEGLGLD+LVHGE  R
Sbjct:  288 PKEKTLGAGIIDARSPWKVDPSKILPLIEELQSLGVSKD----RLCIQPCASLQFVPWDLQNGEDNNLLKHQASKVLSFQQQKIDELHALATSDK--------KFVADTNEAWSVYKSSGTRNE------EVGKAVAGLTEKDFTRGETFEVRRPKQMPELPILPTTSIGSFPQTAGIRRLRQQLKKGTMSKEEYEAAIDKEITFMIGIQEGLGLDILVHGEPER 494          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14730.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z1A8_9STRA1.130e-5150.235-methyltetrahydropteroyltriglutamate--homocystein... [more]
A0A7S2US88_9STRA3.270e-4443.895-methyltetrahydropteroyltriglutamate--homocystein... [more]
A0A1P8SKH4_9STRA4.800e-4345.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
A0A0E3WIJ5_9BACL4.690e-4251.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
B7G1X4_PHATC1.190e-4144.845-methyltetrahydropteroyltriglutamate--homocystein... [more]
A0A1Z5JFR1_FISSO1.240e-4144.445-methyltetrahydropteroyltriglutamate--homocystein... [more]
F2NP98_MARHT2.150e-4147.095-methyltetrahydropteroyltriglutamate--homocystein... [more]
A0A6B3N7T7_9CYAN8.490e-4145.785-methyltetrahydropteroyltriglutamate--homocystein... [more]
D8LTQ6_ECTSI3.370e-4043.355-methyltetrahydropteroyltriglutamate--homocystein... [more]
A0A1E7EZ86_9STRA7.530e-4042.225-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14730contigP-wetherbeei_contig14730:2..1548 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog189425.PGRAT_22110
Preferred namemetE
PFAMsMeth_synt_1,Meth_synt_2
Model size678
Max annot lvl91061|Bacilli
KEGG rclassRC00035,RC00113,RC01241
KEGG koko:K00549
KEGG ReactionR04405,R09365
KEGG Pathwayko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230
KEGG ModuleM00017
Hectar predicted targeting categoryother localisation
GOsGO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003871,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019752,GO:0032259,GO:0042084,GO:0042085,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050667,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
Exons5
Evalue1.45e-42
EggNOG OGsCOG0620@1|root,COG0620@2|Bacteria,1TP2H@1239|Firmicutes,4H9QC@91061|Bacilli,26SEX@186822|Paenibacillaceae
EC2.1.1.14
DescriptionCatalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
Cds size678
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186031.9084675-CDS-P-wetherbeei_contig14730:1..911683186031.9084675-CDS-P-wetherbeei_contig14730:1..91Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14730 2..91 +
1683186031.9219654-CDS-P-wetherbeei_contig14730:190..3401683186031.9219654-CDS-P-wetherbeei_contig14730:190..340Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14730 191..340 +
1683186031.9326274-CDS-P-wetherbeei_contig14730:550..7091683186031.9326274-CDS-P-wetherbeei_contig14730:550..709Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14730 551..709 +
1683186031.9437022-CDS-P-wetherbeei_contig14730:888..10051683186031.9437022-CDS-P-wetherbeei_contig14730:888..1005Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14730 889..1005 +
1683186031.9539368-CDS-P-wetherbeei_contig14730:1386..15481683186031.9539368-CDS-P-wetherbeei_contig14730:1386..1548Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14730 1387..1548 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14730.1.1prot_P-wetherbeei_contig14730.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14730 2..1548 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14730.1.1

>prot_P-wetherbeei_contig14730.1.1 ID=prot_P-wetherbeei_contig14730.1.1|Name=mRNA_P-wetherbeei_contig14730.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=226bp
PASKTLGCGIVEARSVWRADPARMLPLLQAPTGVAKTMRSPRLRIQPSCS
LQFMPVDAAAEVTLKVERPAVAGVLSFAVQKLGELGVLARASLAPDAAAA
APVMAEDAAAWDAFRASVRGSSDACCEAELARRLDALGKDPFTRSLPFEE
RTKLQLPGLPLLPTTTVGSFPQTAEVRRLRGQFKKGSLSESEYLQQMDLR
IAHAIGVQEGLGLDVLVHGEASRVA*
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mRNA from alignment at P-wetherbeei_contig14730:2..1548+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14730.1.1 ID=mRNA_P-wetherbeei_contig14730.1.1|Name=mRNA_P-wetherbeei_contig14730.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1547bp|location=Sequence derived from alignment at P-wetherbeei_contig14730:2..1548+ (Phaeothamnion wetherbeei SAG_119_79)
CCCGCCTCCAAGACGCTTGGCTGCGGTATCGTGGAGGCGCGCTCCGTCTG GCGGGCTGACCCCGCCCGCATGCTGCCCCTGCTGCAAGCCGTTAAGGACG CGATCGGTCTCGGCGGCGGGGCGGAGGGGCCCGAGGGGGCGGCGGTGGAT GGGGCGGGCGGGGCGGGCGCGGCGGTGAGCGCATCGGAGCCGACGGGCGT GGCGAAGACGATGCGTTCCCCCCGCCTGCGCATCCAGCCCTCGTGTTCAC TTCAATTCATGCCGGTTGATGCAGCGGCAGAAGTGACGCTGAAAGTGGAG CGCCCCGCCGTCGCCGGCGTGCTGTCCTTTGCGGTCCAGGTGCGCGCGTG CCAGTGTGCCTTGCTTTGTGTGATTGAATATGGGCCAGCATGCATTCCAA TGCCTTTTCTTCGAGCTGGATTTTCGCCCTATCTTTGGTGGTTGCTGAAG AGGCTGGCTGCGTTTTTACGCATCCAGTGGGCCATCCTCGCTCTTCTTCC TTCCTTTTCGAATACGGCGGCGGCCCGGCTCCTGAACCTCTTAACGCAGA AACTCGGCGAGCTTGGTGTGCTGGCACGTGCATCGCTGGCTCCCGACGCT GCGGCCGCTGCGCCAGTCATGGCGGAGGATGCGGCCGCATGGGACGCGTT CCGGGCTTCGGTGCGCGGCTCTTCCGATGCATGCTGCGAAGCGGAACTGG CACGCAGGGTGCGTTCGTGAGGGCGGGGGACAAAGTGCCATTTTGCGTGT TTGCTTTGCGGAATGAATGGGTTGATGATGTCTTGTTCTGAATCGTGTCG CTTCTGAGCGAGTAGTTTACGAGACCGACAGGTCCGTTCACTGTGGACGA CCCAACTGCGCTTGATTCACGCTGCTTAAGAATGCAGCTGGACGCCTTGG GCAAGGACCCCTTCACGCGCAGTCTGCCCTTCGAGGAGCGCACCAAGCTG CAGCTCCCCGGCCTGCCTCTCCTGCCCACCACCACAGTTGGCAGCTTCCC GCAGGTATGGAATTGGGTCCTCCCTCCCATGTGACCTTAGCAATCCACTT TGACGAGTTGGAAACACATAGCCGGCTAGGTTGTAAGGAAACCCTTTTTG AGATATCACTTTCAAGGCAAAGGACTTCCCGCGCGTCCACATTCCTCCAT GCTTATCCTCCCTAGCTTGATGTGTCAGCTGCGGCAGCGTGGCCATTGAC ATTCTGCGAAACCGGCTGCGGAGCTGTATCTACTACTTCCTCTCTCTGAA TACGAACGACCCCCCTTCTCGTCCACGTCACGTCCCTTCCCCTCTCGTCT CTCGTAGCCGCTCATCTTAGCTCCTGCCGCCCGCCACCGCCGCCGCCGCC GTAATCCCTGCCGCTCCGCTTGGCGCCGCCGTCAGACTGCCGAGGTGCGT CGACTGCGGGGGCAATTCAAGAAGGGGTCGCTCTCGGAGTCCGAGTACCT CCAGCAGATGGACCTTCGCATCGCCCACGCCATCGGTGTGCAGGAGGGAC TCGGCCTCGACGTCCTCGTCCACGGAGAGGCGAGTCGTGTCGCCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14730:2..1548+

>mRNA_P-wetherbeei_contig14730.1.1 ID=mRNA_P-wetherbeei_contig14730.1.1|Name=mRNA_P-wetherbeei_contig14730.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=678bp|location=Sequence derived from alignment at P-wetherbeei_contig14730:2..1548+ (Phaeothamnion wetherbeei SAG_119_79)
CCCGCCTCCAAGACGCTTGGCTGCGGTATCGTGGAGGCGCGCTCCGTCTG
GCGGGCTGACCCCGCCCGCATGCTGCCCCTGCTGCAAGCCCCGACGGGCG
TGGCGAAGACGATGCGTTCCCCCCGCCTGCGCATCCAGCCCTCGTGTTCA
CTTCAATTCATGCCGGTTGATGCAGCGGCAGAAGTGACGCTGAAAGTGGA
GCGCCCCGCCGTCGCCGGCGTGCTGTCCTTTGCGGTCCAGAAACTCGGCG
AGCTTGGTGTGCTGGCACGTGCATCGCTGGCTCCCGACGCTGCGGCCGCT
GCGCCAGTCATGGCGGAGGATGCGGCCGCATGGGACGCGTTCCGGGCTTC
GGTGCGCGGCTCTTCCGATGCATGCTGCGAAGCGGAACTGGCACGCAGGC
TGGACGCCTTGGGCAAGGACCCCTTCACGCGCAGTCTGCCCTTCGAGGAG
CGCACCAAGCTGCAGCTCCCCGGCCTGCCTCTCCTGCCCACCACCACAGT
TGGCAGCTTCCCGCAGACTGCCGAGGTGCGTCGACTGCGGGGGCAATTCA
AGAAGGGGTCGCTCTCGGAGTCCGAGTACCTCCAGCAGATGGACCTTCGC
ATCGCCCACGCCATCGGTGTGCAGGAGGGACTCGGCCTCGACGTCCTCGT
CCACGGAGAGGCGAGTCGTGTCGCCTGA
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