mRNA_P-wetherbeei_contig14718.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14718.1.1 vs. uniprot
Match: A0A835Z2J1_9STRA (Vesicle transport protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2J1_9STRA) HSP 1 Score: 199 bits (505), Expect = 5.140e-61 Identity = 95/176 (53.98%), Postives = 133/176 (75.57%), Query Frame = 3
Query: 144 QSVRRQSQRLLGIEQPEQKSSIAELEEAVCGFCPTLTYKERLIGFGICFGIGWIITIGSLFRILQLLAGNPVPFVVFYTIGNLLSICASLFLSGPWAQLKRMFAPSRFVATSVYLGAMALTFFVAFASFMPGREAILILLIIVQFAALCWYTMTYIPFARQYMTKCC--GQLCADE 665
+SVR ++RLLG E+ K+ ELEE VC FCP+LTYK+RLIGFG+C +G+I+T G+LFRI++L+AGNP+PFV+ Y+IGN++SICAS FL+GPWAQ+K+MF P+R VAT VY+ + LTF VA A MP R +L+ L+++QF + WY ++YIPFAR++ C G+ C +
Sbjct: 23 ESVRVSTRRLLGQEEAPLKTRAEELEEYVCSFCPSLTYKQRLIGFGVCLTLGFILTFGALFRIVRLVAGNPLPFVINYSIGNVISICASFFLNGPWAQIKKMFEPTRVVATGVYITTLGLTFAVALAPRMPLRAPLLVTLVVLQFMSFIWYALSYIPFAREWAAGACRSGRCCGGD 198
BLAST of mRNA_P-wetherbeei_contig14718.1.1 vs. uniprot
Match: D8LG13_ECTSI (Vesicle transport protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG13_ECTSI) HSP 1 Score: 177 bits (450), Expect = 5.750e-53 Identity = 83/170 (48.82%), Postives = 128/170 (75.29%), Query Frame = 3
Query: 129 LSETTQSVRRQSQRLLGIEQPEQKSSIAELEEAVCGFCPTLTYKERLIGFGICFGIGWIITIGSLFRILQLLAGNPVPFVVFYTIGNLLSICASLFLSGPWAQLKRMFAPSRFVATSVYLGAMALTFFVAFASF--MPGREAILILLIIVQFAALCWYTMTYIPFARQYM 632
+ + +S++ S RLLG E PE+KS++ E+EEAVC CP+L+++ RLIG+G C +G+ +T GSLFR+ QLL GNP PFV+++++G+ L+IC+S FL+GPW Q+K+MF P R VATS+YL ++ T FVA + + +P R +L+ L++ QF + WYT++Y+PFAR++M
Sbjct: 1 MDDAFESMKASSMRLLGGE-PEEKSTLQEMEEAVCSVCPSLSWRNRLIGYGACLAVGFCLTFGSLFRVAQLLTGNPRPFVLYFSLGSALNICSSFFLTGPWKQIKKMFNPVRAVATSIYLATLSATLFVALSPYASVPFRGILLLCLVVAQFLSYVWYTLSYVPFARRFM 169
BLAST of mRNA_P-wetherbeei_contig14718.1.1 vs. uniprot
Match: F0YE90_AURAN (Vesicle transport protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YE90_AURAN) HSP 1 Score: 161 bits (407), Expect = 1.600e-46 Identity = 75/162 (46.30%), Postives = 112/162 (69.14%), Query Frame = 3
Query: 186 QPEQKSSIAELEEAVCGFCPTLTYKERLIGFGICFGIGWIITIGSLFRILQLLAGNPVPFVVFYTIGNLLSICASLFLSGPWAQLKRMFAPSRFVATSVYLGAMALTFFVA-FASFMPGREAILILLIIVQFAALCWYTMTYIPFARQYMTKCCGQLCADEV 668
+P ++ ++EE C CP L++K+RLIGF +CF +G ++ +GS RI++L+ GNP PF V Y++GN+++IC+S FL+GP+ Q K M AP+R +AT+ YL A+ T FVA F + +P R ++ILL+ VQ AL WY ++YIPFAR ++ CC CAD
Sbjct: 11 EPRPQTVAEQVEEECCKACPRLSWKQRLIGFSLCFALGVVVELGSFMRIVELVGGNPKPFAVTYSLGNVIAICSSFFLAGPYKQCKSMLAPTRVIATATYLVAIGATLFVALFDARIPARAGLIILLVCVQTIALFWYMISYIPFARDFVKNCCKGCCADAT 172
BLAST of mRNA_P-wetherbeei_contig14718.1.1 vs. uniprot
Match: W7THB3_9STRA (Vesicle transport protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7THB3_9STRA) HSP 1 Score: 157 bits (396), Expect = 1.740e-44 Identity = 83/181 (45.86%), Postives = 121/181 (66.85%), Query Frame = 3
Query: 108 SSSPFPFLSETTQSVRRQSQRLLGIEQPEQKSSIAELEEAVCGFCPTLTYKERLIGFGICFGIGWIITIGSLFRILQLLAGNPVPFVVFYTIGNLLSICASLFLSGPWAQLKRMFAPSRFVATSVYLGAMALTFFVAFASFMPGREAILILLIIVQFAALCWYTMTYIPFARQYMTKCCGQ 650
S P F + ++ + ++RLLG+E K+ LEE +C +CPTLT+++RL G CF +G I+ GS FR +LL G+P PF V YTIGNL+S+ S FLSGP++Q+K MF P+R V TSVY+ + T +AF+ +PG+ +L+L+IIVQF +L +Y ++YIPFARQ + + CG
Sbjct: 16 SXXPAAFATSSSSNFMDSARRLLGVE-ARPKTFCERLEEDMCWWCPTLTWQQRLFGCLCCFLVGMILEFGSFFRFTKLLTGHPEPFAVMYTIGNLISLAGSCFLSGPFSQVKSMFHPTRAVCTSVYVLTLVFTLLIAFSD-VPGQGPLLVLMIIVQFLSLSYYILSYIPFARQMVWQTCGS 194
BLAST of mRNA_P-wetherbeei_contig14718.1.1 vs. uniprot
Match: A0A482RX34_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RX34_9ARCH) HSP 1 Score: 158 bits (400), Expect = 1.780e-44 Identity = 80/182 (43.96%), Postives = 122/182 (67.03%), Query Frame = 3
Query: 123 PFLSETTQSVRRQSQRLLGIEQPEQKSSIAELEEAVCGFCPTLTYKERLIGFGICFGIGWIITIGSLFRILQLLAGNPVPFVVFYTIGNLLSICASLFLSGPWAQLKRMFAPSRFVATSVYLGAMALTFFVAF-ASFMPGREAILILLIIVQFAALCWYTMTYIPFARQYMTKCCGQLCADE 665
PF SV RQ+ L+ E PEQK ELEE+VC CP ++ ++R++G +C G G++I++GS R+++LL G+P F V YT+GN+L +C++ FL GP +Q K+MFA +R A+ +YL M T F+AF +++PGR A+L+L I++QF AL WYT+++IPFAR + C + C +
Sbjct: 3 PFFDVKLDSVYRQAYSLVSAE-PEQKEWYEELEESVCSTCPKMSLQQRIMGCLVCMGTGFLISMGSTLRLVRLLEGHPEDFAVMYTLGNVLGLCSTCFLYGPLSQAKQMFASTRLAASLIYLTLMGTTLFLAFYPAYVPGRLALLVLSIVLQFLALTWYTLSFIPFARDLVAACLTRSCGCD 183
BLAST of mRNA_P-wetherbeei_contig14718.1.1 vs. uniprot
Match: A0A7S3JV88_9STRA (Vesicle transport protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JV88_9STRA) HSP 1 Score: 155 bits (391), Expect = 4.820e-44 Identity = 78/169 (46.15%), Postives = 117/169 (69.23%), Query Frame = 3
Query: 174 LGIEQPEQKSSIAELEEAVCGFCPTLTYKERLIGFGICFGIGWIITIGSLFRILQLLAGNPVPFVVFYTIGNLLSICASLFLSGPWAQLKRMFAPSRFVATSVYLGAMALTFFVAFASFMP--GREAILILLIIVQFAALCWYTMTYIPFARQYMTKCCGQLCADEV*R 674
LG+ + + K++ E E+A+C CP LTY++R+ G+ CF + + ++IGS R+++L+ GNP PFVVFYT+GN+++I SLFLSGP AQ K+M+ P+R +ATSVYL + T FVAF +P GR I+I+ I +Q+ A+ WYT+++IP+AR Y+ C Q D R
Sbjct: 8 LGLAEEKPKTAAEEFEDALCSICPQLTYQQRIGGYIACFFVSFCLSIGSFTRLVELVKGNPAPFVVFYTLGNVMAIIGSLFLSGPRAQCKKMWDPTRRIATSVYLLTIFFTIFVAFYEGIPDDGRIGIIIMCIFIQWIAMLWYTISFIPYARDYVIMICCQGPKDACNR 176
BLAST of mRNA_P-wetherbeei_contig14718.1.1 vs. uniprot
Match: A0A7S3MGJ6_9STRA (Vesicle transport protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MGJ6_9STRA) HSP 1 Score: 147 bits (372), Expect = 5.460e-41 Identity = 78/171 (45.61%), Postives = 114/171 (66.67%), Query Frame = 3
Query: 156 RQSQRLLGIEQPEQKSSIAELEEAVCGFCPTLTYKERLIGFGICFGIGWIITIGSLFRILQLLAGNPVPFVVFYTIGNLLSICASLFLSGPWAQLKRMFAPSRFVATSVYLGAMALTFFVAF-ASFMPGREAILILLIIVQFAALCWYTMTYIPFARQYMTKCCGQLCADE 665
+Q+ LL +EQ QK +LEE VC P LTY++R+IG C IG+I+++GS FR+++L+ G+P PF YTIGN++ + ++ FL GP +Q+K+MFAP+R VAT+VYL MA T +AF ++P R L++ I QF AL WY ++YIPFAR+ M C +C +
Sbjct: 12 KQAYTLLPVEQ-RQKEWYEDLEEQVCSIFPALTYQQRIIGCLTCLLIGFILSMGSTFRLIKLMEGDPEPFATMYTIGNIVGLFSTCFLYGPVSQVKQMFAPTRLVATAVYLFFMATTLLLAFYPEYIPVRVMWLLISIFFQFLALVWYNLSYIPFAREIMKNMCQTMCCKD 181
BLAST of mRNA_P-wetherbeei_contig14718.1.1 vs. uniprot
Match: A0A7S3K459_9STRA (Vesicle transport protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K459_9STRA) HSP 1 Score: 147 bits (372), Expect = 1.030e-40 Identity = 80/189 (42.33%), Postives = 121/189 (64.02%), Query Frame = 3
Query: 108 SSSPFPFLSETTQSVRRQSQRLLGIEQPEQKSSIAELEEAVCGFCPTLTYKERLIGFGICFGIGWIITIGSLFRILQLLAGNPVPFVVFYTIGNLLSICASLFLSGPWAQLKRMFAPSRFVATSVYLGAMALTFFVAFASF-MPG--REAILILLIIVQFAALCWYTMTYIPFARQYMTKCCGQLCADE 665
SSS S++ Q + QS LLG + K+ + +LEE VC CP +TY++R+ G+ C + +++TIG+ R+ +LAGNPVPF VFY+ N+++I +SLFLSGP+ Q KRM SR++ATS+Y+ ++ T F F + +P +++LLI VQ+ AL WYT++YIPF R Y+ CC +D
Sbjct: 18 SSSILDQASKSMQELADQSVALLGYRE---KTQLEQLEEEVCSCCPDMTYQQRIAGYLTCIFLSFLLTIGAATRLSDVLAGNPVPFAVFYSAENIVAIVSSLFLSGPYNQYKRMCDNSRYIATSIYIISIFATIFFCFYTIGIPSIVTLVLILLLIFVQWCALIWYTLSYIPFVRDYLLSCCFDCFSDS 203
BLAST of mRNA_P-wetherbeei_contig14718.1.1 vs. uniprot
Match: A0A7S2XZK4_9STRA (Vesicle transport protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZK4_9STRA) HSP 1 Score: 142 bits (359), Expect = 8.170e-40 Identity = 67/132 (50.76%), Postives = 94/132 (71.21%), Query Frame = 3
Query: 267 LIGFGICFGIGWIITIGSLFRILQLLAGNPVPFVVFYTIGNLLSICASLFLSGPWAQLKRMFAPSRFVATSVYLGAMALTFFVAFASFMPGREAILILLIIVQFAALCWYTMTYIPFARQYMTKCCGQLCAD 662
+IG + G G ++++GS+FRI+QL+ G P+PFVVFY++GN++S+C S+FLSGPW Q+KRMFAP+R AT VYL + T +AF +P + IL++L IVQ AL WY ++YIP AR Y TKC C +
Sbjct: 1 MIGCAVTLGFGLLLSMGSVFRIMQLIRGRPIPFVVFYSLGNVVSLCGSMFLSGPWNQIKRMFAPTRAFATIVYLSTLVTTLTLAFTPGVPFKGGILLILFIVQLLALFWYMLSYIPGARNYATKCLKASCCE 132
BLAST of mRNA_P-wetherbeei_contig14718.1.1 vs. uniprot
Match: A0A8K1FHZ8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHZ8_PYTOL) HSP 1 Score: 143 bits (361), Expect = 1.410e-39 Identity = 73/170 (42.94%), Postives = 112/170 (65.88%), Query Frame = 3
Query: 150 VRRQSQRLLGIEQPEQKSSIAELEEAVCGFCPTLTYKERLIGFGICFGIGWIITIGSLFRILQLLAGNPVPFVVFYTIGNLLSICASLFLSGPWAQLKRMFAPSRFVATSVYLGAMALTFFVAFASFMPGREAILILLIIVQFAALCWYTMTYIPFARQYMTKCCGQLCA 659
+R+Q Q+LL E + + +EA GFCP LTY+ER+IG CF +G++++IGS FR ++L+ GNP PF V YTIGNLLSIC+S+F GP Q++ MF R + +Y+G + LT + F+ +P R ++++ I+ QF AL WYT++Y+P+ RQ + CC ++
Sbjct: 5 LRQQKQKLLDPESGRESA----YKEANYGFCPGLTYQERVIGCLTCFLLGFLLSIGSTFRFVKLVHGNPGPFAVAYTIGNLLSICSSMFFVGPCKQIETMFRQKRRGSAILYIGFIVLTLVLCFSRELPHRVGLVMISILCQFVALVWYTLSYVPYGRQIVLTCCKRMAG 170 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14718.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14718.1.1 >prot_P-wetherbeei_contig14718.1.1 ID=prot_P-wetherbeei_contig14718.1.1|Name=mRNA_P-wetherbeei_contig14718.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=199bp MAGRERVFFFYSSSPFPFLSETTQSVRRQSQRLLGIEQPEQKSSIAELEEback to top mRNA from alignment at P-wetherbeei_contig14718:388..1685- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14718.1.1 ID=mRNA_P-wetherbeei_contig14718.1.1|Name=mRNA_P-wetherbeei_contig14718.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1298bp|location=Sequence derived from alignment at P-wetherbeei_contig14718:388..1685- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14718:388..1685- >mRNA_P-wetherbeei_contig14718.1.1 ID=mRNA_P-wetherbeei_contig14718.1.1|Name=mRNA_P-wetherbeei_contig14718.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=597bp|location=Sequence derived from alignment at P-wetherbeei_contig14718:388..1685- (Phaeothamnion wetherbeei SAG_119_79)back to top |