mRNA_P-wetherbeei_contig14707.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14707.1.1 vs. uniprot
Match: UPI00199EB5AD (Uncharacterized protein n=2 Tax=Dyadobacter endophyticus TaxID=1749036 RepID=UPI00199EB5AD) HSP 1 Score: 390 bits (1001), Expect = 3.260e-132 Identity = 197/247 (79.76%), Postives = 213/247 (86.23%), Query Frame = 1
Query: 1 MYNMSDSFWEATYRQNIAKMIGVCWRYTQNRQVAEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQYLREQKRLEKWEEAHTYDAVGDDMQEENPMSDDRGFSEAELLEAIGYLPEHHRLVFNLYVVDNFTHAQIAARLGISEGTSKSHLARARKKIRELLHDKLKNNKEWKRAFVWLLLPYPIGHIERLVSGKLNNLAIRPQRKFSLDISAPEPPIPPFKPTGISYATYMKTGIMTIATA 741
MYNMSDSFWE TYRQNIAKMIGVC RYTQNRQ AEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQYLREQKR EKWEEAH Y + +++QEENP +D RGFSEAELLE IG LPEHHRLVFNLYVVDNFTHAQIA RLGISEGTSKSHLARARKKIRELL DKL+ +KE KRAF WL+ YP H++ LV+GKL NLAIRPQR+ S I+ +P FKP+GISY YMKTG+MTIATA
Sbjct: 1 MYNMSDSFWETTYRQNIAKMIGVCCRYTQNRQTAEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQYLREQKRQEKWEEAHAYHTIANELQEENPANDQRGFSEAELLEVIGQLPEHHRLVFNLYVVDNFTHAQIATRLGISEGTSKSHLARARKKIRELLKDKLRKDKERKRAFAWLMFSYPFRHVDHLVAGKLRNLAIRPQRRLS--IANTNSGVPGFKPSGISYGAYMKTGLMTIATA 245
BLAST of mRNA_P-wetherbeei_contig14707.1.1 vs. uniprot
Match: A0A1H6RIS8_9BACT (RNA polymerase sigma factor, sigma-70 family n=2 Tax=Dyadobacter sp. SG02 TaxID=1855291 RepID=A0A1H6RIS8_9BACT) HSP 1 Score: 368 bits (944), Expect = 1.170e-123 Identity = 189/244 (77.46%), Postives = 208/244 (85.25%), Query Frame = 1
Query: 10 MSDSFWEATYRQNIAKMIGVCWRYTQNRQVAEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQYLREQKRLEKWEEAHTYDAVGDDMQEENPMSDDRGFSEAELLEAIGYLPEHHRLVFNLYVVDNFTHAQIAARLGISEGTSKSHLARARKKIRELLHDKLKNNKEWKRAFVWLLLPYPIGHIERLVSGKLNNLAIRPQRKFSLDISAPEPPIPPFKPTGISYATYMKTGIMTIATA 741
MSDSFWEA YRQNIAKMIGVC RYTQNRQ AEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQ+LREQKR EKWE AH Y + ++Q+ENP DDR FSEAELLE I LP+HHRLVFNLYVVDNFTHAQIA+ L ISEGTSKSHL+RARK++RELLHDKL+N KE KRAF WLLLPYP G I+RLV+GKL+NLAI PQR + + E P FKP GISYATY+KTG++TIATA
Sbjct: 3 MSDSFWEAAYRQNIAKMIGVCCRYTQNRQTAEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQHLREQKRQEKWEAAHAYQTIIHEIQDENPFHDDRVFSEAELLEVINSLPDHHRLVFNLYVVDNFTHAQIASLLHISEGTSKSHLSRARKRVRELLHDKLRNGKERKRAFFWLLLPYPFGGIDRLVAGKLSNLAILPQRNTAFHMLH-EAHAPVFKPAGISYATYVKTGVLTIATA 245
BLAST of mRNA_P-wetherbeei_contig14707.1.1 vs. uniprot
Match: A0A1G7PYY4_9BACT (RNA polymerase sigma factor, sigma-70 family n=2 Tax=Dyadobacter soli TaxID=659014 RepID=A0A1G7PYY4_9BACT) HSP 1 Score: 358 bits (919), Expect = 9.760e-120 Identity = 181/247 (73.28%), Postives = 203/247 (82.19%), Query Frame = 1
Query: 1 MYNMSDSFWEATYRQNIAKMIGVCWRYTQNRQVAEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQYLREQKRLEKWEEAHTYDAVGDDMQEENPMSDDRGFSEAELLEAIGYLPEHHRLVFNLYVVDNFTHAQIAARLGISEGTSKSHLARARKKIRELLHDKLKNNKEWKRAFVWLLLPYPIGHIERLVSGKLNNLAIRPQRKFSLDISAPEPPIPPFKPTGISYATYMKTGIMTIATA 741
MY+MSDSFWEATYRQNIAKMIGVCWRYT +RQ AEDLAHDAFL+AIDKVSSFEN GPFEAWLRRIVVNVALQ+LREQKR EKWE H Y A G Q+E+P + R FSE+ELLE IGYLP+HHR+VFNLYV+DNFTHAQIAA LGISEGTSKSHLARARKKIR LL + K+ KRAF WLL +PI I+ LV+GKL NLAI PQ + SLD++ E P+P FKP+GISY TY KTG+M I TA
Sbjct: 1 MYHMSDSFWEATYRQNIAKMIGVCWRYTHDRQTAEDLAHDAFLLAIDKVSSFENNGPFEAWLRRIVVNVALQHLREQKRQEKWEADHAYGAPGYISQDESPADNGRSFSESELLETIGYLPDHHRIVFNLYVIDNFTHAQIAALLGISEGTSKSHLARARKKIRALLDKQAGQAKKRKRAFFWLLFSHPIHPIDHLVAGKLKNLAIEPQTRLSLDVTNAEAPVPAFKPSGISYTTYWKTGVMGITTA 247
BLAST of mRNA_P-wetherbeei_contig14707.1.1 vs. uniprot
Match: UPI001FD55611 (RNA polymerase sigma factor n=1 Tax=Dyadobacter sp. U1 TaxID=2910158 RepID=UPI001FD55611) HSP 1 Score: 313 bits (801), Expect = 8.960e-102 Identity = 164/246 (66.67%), Postives = 196/246 (79.67%), Query Frame = 1
Query: 1 MYNMSDSFWEATYRQNIAKMIGVCWRYTQNRQVAEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQYLREQKRLEKWEEAHTYDAVGDDMQEENPMSDDRGFSEAELLEAIGYLPEHHRLVFNLYVVDNFTHAQIAARLGISEGTSKSHLARARKKIRELLHDKLKNNKEWKRAFVWLLLPYPIGHIERLVSGKLNNLAIRPQRKFSL-DISAPEPPIPPFKPTGISYATYMKTGIMTIA 735
M SD+FWEATYRQNIAKMIGVC RYTQNRQ AEDLAHDAFLVAIDKVSSFENKGPFEAWLRRI VNVALQ+LR QKR +++ + Y DD+ + N +++ FSE ELLE I YLPEHHRLVFNLYVVDNFTHAQIAA+LGIS+GTSKSHLARARKKIRELL D+L+ +KE KR FV+LL PY + I+ L + L +L ++P R FS+ +I+ + PIP ++PTGIS + Y+KTG+ IA
Sbjct: 1 MDKRSDNFWEATYRQNIAKMIGVCCRYTQNRQTAEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIAVNVALQHLRVQKREQRFVQIAAYATPYDDIPDGNAGNENLTFSETELLEVISYLPEHHRLVFNLYVVDNFTHAQIAAQLGISQGTSKSHLARARKKIRELLSDRLRKDKERKRGFVFLLFPYKLWSIDNLFAATLRDLLMQPTRDFSISNINLNQQPIPKYRPTGISNSIYLKTGVWGIA 246
BLAST of mRNA_P-wetherbeei_contig14707.1.1 vs. uniprot
Match: A0A5B0FU88_9BACT (RNA polymerase sigma factor n=1 Tax=Dyadobacter sp. UC 10 TaxID=2605428 RepID=A0A5B0FU88_9BACT) HSP 1 Score: 293 bits (751), Expect = 2.660e-94 Identity = 158/247 (63.97%), Postives = 192/247 (77.73%), Query Frame = 1
Query: 10 MSDSFWEATYRQNIAKMIGVCWRYTQNRQVAEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQYLREQKRLEKWEEAHTYDAVGDDMQEENPMSDDRGFSEAELLEAIGYLPEHHRLVFNLYVVDNFTHAQIAARLGISEGTSKSHLARARKKIRELLHDKLKNNKEWKRAFVWLLLPYPIGHIERLVSGKLNNLAIRPQRKF---SLDISAPEPPIPPFKPTGISYATYMKTGIMTIATA 741
MSDSFWEATYR+NI KMIG+C RYTQ+RQ AEDLAHDAF++AIDKVSSFEN+GPFEAWLR+IVVNVALQYLR QK+ EK + + Y A+ D EE+P +D FSE ELL IG LPEHHRLVFNLYV+DNFTHAQIAA+LGISEGTSKSHLARARKKIR LLH L NNKE KRAF++++ P+ I HI++L + L +I P+ + +D++ IP ++P I +TY+KTG + IATA
Sbjct: 1 MSDSFWEATYRRNIGKMIGICCRYTQDRQTAEDLAHDAFVIAIDKVSSFENRGPFEAWLRQIVVNVALQYLRAQKQQEKLGQ-NAYPAIYDHHHEESPDNDLNAFSEQELLSVIGQLPEHHRLVFNLYVIDNFTHAQIAAQLGISEGTSKSHLARARKKIRVLLHLLLTNNKERKRAFLFIIFPHRIWHIDQLFTDILGQFSIPPRAEHLFHQVDLNGAA--IPKYQPLFIQKSTYLKTGALGIATA 244
BLAST of mRNA_P-wetherbeei_contig14707.1.1 vs. uniprot
Match: A0A1T5EUF8_9BACT (RNA polymerase sigma factor, sigma-70 family n=1 Tax=Dyadobacter psychrophilus TaxID=651661 RepID=A0A1T5EUF8_9BACT) HSP 1 Score: 286 bits (733), Expect = 1.250e-91 Identity = 151/245 (61.63%), Postives = 186/245 (75.92%), Query Frame = 1
Query: 1 MYNMSDSFWEATYRQNIAKMIGVCWRYTQNRQVAEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQYLREQKRLEKWEEAHTYDAVGDDMQEENPMSDDRGFSEAELLEAIGYLPEHHRLVFNLYVVDNFTHAQIAARLGISEGTSKSHLARARKKIRELLHDKLKNNKEWKRAFVWLLLPYPIGHIERLVSGKLNNLAIRPQRKFSLDISAPEPPIPPFKPTGISYATYMKTGIMTIA 735
M N S++FWE+ YRQNIAKMIGVCWRYTQ+RQ AEDLAHDAF+VAI+K SSFENKGPFEAWLRRIVVNVALQYLRE+K+ + + + D+++EN +D FSEAELLE IGYLPEHHRLVFNLYV+DNF+HAQIAARL ISEGTSKSHLARARKKIR+LL KL+ +K+ +R F+ LL P HI+ L++ LN I P + +I+ PP+ +P +S TY+K GI ++A
Sbjct: 1 MDNRSNNFWESIYRQNIAKMIGVCWRYTQDRQTAEDLAHDAFVVAINKASSFENKGPFEAWLRRIVVNVALQYLRERKKSDNLDRPAATTFIYSDVEDENSHNDLHTFSEAELLEVIGYLPEHHRLVFNLYVIDNFSHAQIAARLSISEGTSKSHLARARKKIRQLLQAKLQEDKKRRRTFLLLLFPSRFWHIDSLITKGLNGFEIEPLKNRPENIALDLPPVSNSRPF-MSNKTYLKYGISSVA 244
BLAST of mRNA_P-wetherbeei_contig14707.1.1 vs. uniprot
Match: A0A7K1SPK6_9BACT (Sigma-70 family RNA polymerase sigma factor n=1 Tax=Spirosoma arboris TaxID=2682092 RepID=A0A7K1SPK6_9BACT) HSP 1 Score: 275 bits (702), Expect = 8.260e-87 Identity = 148/248 (59.68%), Postives = 184/248 (74.19%), Query Frame = 1
Query: 1 MYNMSDSFWEATYRQNIAKMIGVCWRYTQNRQVAEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQYLREQKRLEKWEEAHTYDAVGDDMQEENPMSDDRGFSEAELLEAIGYLPEHHRLVFNLYVVDNFTHAQIAARLGISEGTSKSHLARARKKIRELLHDKLKNNKEWKRAFVWLLLPYPIGHIERLVSGKLNNLAIRPQRKF---SLDISAPEPPIPPFKPTGISYATYMKTGIMTIA 735
M ++ SFWEATY+QNIAK+IGVC+RYT NRQ+AEDLAHDAFLVAIDK SSFENKG F+AWLRRIV+NVALQYLREQK+ + E+ YD D Q+EN ++++ FS+AELLEAI LPEHH+LVFNLYV DNFTHAQI A LGISEGTSKSHLARARKKIR++L++K+ NK+ R F+ LLP + I+ L + +LN I+PQ+ F ++D S E KP+ I Y+K I +A
Sbjct: 1 MNGVTKSFWEATYKQNIAKLIGVCYRYTYNRQIAEDLAHDAFLVAIDKSSSFENKGSFDAWLRRIVINVALQYLREQKKQKHQEDRIAYDTTSIDYQDENQVNEENTFSKAELLEAIERLPEHHKLVFNLYVFDNFTHAQIGAELGISEGTSKSHLARARKKIRQILNEKVNENKKRTRLFLLFLLPDKLYKIDHLFARQLNYFEIQPQKLFPFHTIDFS--EISTLKSKPSAIFSEAYLKIDIAAVA 246
BLAST of mRNA_P-wetherbeei_contig14707.1.1 vs. uniprot
Match: UPI001F2C0AA9 (RNA polymerase sigma factor n=1 Tax=Dyadobacter sp. LJ419 TaxID=2906456 RepID=UPI001F2C0AA9) HSP 1 Score: 273 bits (699), Expect = 1.870e-86 Identity = 146/242 (60.33%), Postives = 179/242 (73.97%), Query Frame = 1
Query: 1 MYNMSDSFWEATYRQNIAKMIGVCWRYTQNRQVAEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQYLREQKRLEKWEEAHTYDAVGDDMQEENPMSDDRGFSEAELLEAIGYLPEHHRLVFNLYVVDNFTHAQIAARLGISEGTSKSHLARARKKIRELLHDKLKNNKEWKRAFVWLLLPYPIGHIERLVSGKLNNLAIRPQRKFSLDISAPE-PPIPPFKPTGISYATYMKTGI 723
M N+S FWE YRQNI KMI VCWRYT +RQ AEDLAHDAF+VAI KV+SF+N+GPFEAWLRRIVVNVALQYLR+QK EK Y D Q+ENP FSE ELLE I LPEHH+LVFNLYV+DNFTHAQIAA+LGISEGTSKSHLARARKKIRELL++++++NK K++F +LPY I+ + G+L +L ++P+R SL+IS E IP + TG++ + K G+
Sbjct: 1 MDNISKHFWEDAYRQNIGKMIAVCWRYTHDRQTAEDLAHDAFVVAIGKVTSFKNRGPFEAWLRRIVVNVALQYLRQQKEREKIRIGTEYPCELDANQDENPGR--FSFSEIELLEVISNLPEHHKLVFNLYVIDNFTHAQIAAQLGISEGTSKSHLARARKKIRELLNERIRDNKRGKKSFPLFILPYQSWGIDGFIFGRLKDLQVQPKRLLSLNISKTECMTIPKYVSTGLTSRFFFKAGL 240
BLAST of mRNA_P-wetherbeei_contig14707.1.1 vs. uniprot
Match: UPI001F20BD51 (RNA polymerase sigma factor n=1 Tax=Dyadobacter sp. CY323 TaxID=2907302 RepID=UPI001F20BD51) HSP 1 Score: 273 bits (698), Expect = 2.570e-86 Identity = 147/242 (60.74%), Postives = 176/242 (72.73%), Query Frame = 1
Query: 1 MYNMSDSFWEATYRQNIAKMIGVCWRYTQNRQVAEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQYLREQKRLEKWEEAHTYDAVGDDMQEENPMSDDRGFSEAELLEAIGYLPEHHRLVFNLYVVDNFTHAQIAARLGISEGTSKSHLARARKKIRELLHDKLKNNKEWKRAFVWLLLPYPIGHIERLVSGKLNNLAIRPQRKFSLDIS-APEPPIPPFKPTGISYATYMKTGI 723
M N++++FWE TYRQNI+KMIGVCWRYTQ+RQ AEDLAHDAF+VAI KVSSFENKGPFEAWLRRIVVNVALQ+LR+QK EK + Y A + +QEENP D FSE ELLE I LPEHHRLVFNLYV+DN TH +IAA+LGISEGTSKSHLARARKK+RELL +++ K ++ F L LP+ +I+ VS +L L I+P + S + A IP +KP G KT I
Sbjct: 1 MDNLTNNFWENTYRQNISKMIGVCWRYTQDRQTAEDLAHDAFVVAIGKVSSFENKGPFEAWLRRIVVNVALQHLRQQKIREKLAQGAAYPAAYEVIQEENPDCDHFSFSETELLEVIANLPEHHRLVFNLYVIDNLTHGEIAAQLGISEGTSKSHLARARKKVRELLSAQIREKKGHRKWFPLLFLPFQFRNIDEFVSRELGGLQIQPLKGASFQTARAQHALIPKWKPAGSGSTFLSKTAI 242
BLAST of mRNA_P-wetherbeei_contig14707.1.1 vs. uniprot
Match: A0A6P1VWY0_9BACT (Sigma-70 family RNA polymerase sigma factor n=1 Tax=Spirosoma endbachense TaxID=2666025 RepID=A0A6P1VWY0_9BACT) HSP 1 Score: 265 bits (677), Expect = 4.550e-83 Identity = 147/246 (59.76%), Postives = 173/246 (70.33%), Query Frame = 1
Query: 1 MYNMSDSFWEATYRQNIAKMIGVCWRYTQNRQVAEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQYLREQKRLEKWEEAHTYDAVGDDMQEENPMSDDRGFSEAELLEAIGYLPEHHRLVFNLYVVDNFTHAQIAARLGISEGTSKSHLARARKKIRELLHDKLKNNKEWKRAFVWLLLPYPIGHIERLVSGKLNNLAIRPQRKFSLD-ISAPEPPIPPFKPTGISYATYMKTGIMTIA 735
M ++ SFWE Y+ NIAKMIGVC+RYT NRQ+AEDLAHDAFLVAIDK SSFENKG FEAWLRRIVVN ALQYLREQK+ + Y + Q EN ++++ FSEAELLEAI LPEHH+LVFNLYV DNFTHAQI LGISEGTSKSHLARARK IR +L K K NK+ K+ V +LLP + HI+ L + KLN I+PQ+ +D I IP FK I Y+KT + T+A
Sbjct: 1 MNDVPKSFWETIYKHNIAKMIGVCYRYTYNRQIAEDLAHDAFLVAIDKSSSFENKGSFEAWLRRIVVNTALQYLREQKKKKCHLGRIAYVMASTEPQNENQLNEETNFSEAELLEAIECLPEHHKLVFNLYVFDNFTHAQIGVELGISEGTSKSHLARARKSIRGILTKKAKGNKKRKKLAVLILLPDRLWHIDDLFTRKLNYFEIQPQKSAPIDTIDFSGISIPKFKSPTIFSENYLKTDVSTLA 246 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14707.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14707.1.1 >prot_P-wetherbeei_contig14707.1.1 ID=prot_P-wetherbeei_contig14707.1.1|Name=mRNA_P-wetherbeei_contig14707.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=247bp MYNMSDSFWEATYRQNIAKMIGVCWRYTQNRQVAEDLAHDAFLVAIDKVSback to top mRNA from alignment at P-wetherbeei_contig14707:1..741- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14707.1.1 ID=mRNA_P-wetherbeei_contig14707.1.1|Name=mRNA_P-wetherbeei_contig14707.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=741bp|location=Sequence derived from alignment at P-wetherbeei_contig14707:1..741- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14707:1..741- >mRNA_P-wetherbeei_contig14707.1.1 ID=mRNA_P-wetherbeei_contig14707.1.1|Name=mRNA_P-wetherbeei_contig14707.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=741bp|location=Sequence derived from alignment at P-wetherbeei_contig14707:1..741- (Phaeothamnion wetherbeei SAG_119_79)back to top |